Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75506.t1 | AES72175.1 | 75.9 | 493 | 44 | 4 | 1 | 466 | 1 | 445 | 1.20E-206 | 729.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75506.t1 | P61871 | 29.7 | 219 | 119 | 9 | 145 | 362 | 150 | 334 | 5.7e-11 | 70.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75506.t1 | G7J382 | 75.9 | 493 | 44 | 4 | 1 | 466 | 1 | 445 | 8.9e-207 | 729.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05435 | MS.gene75506 | 0.800346 | 1.50E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75506.t1 | MTR_3g086880 | 75.862 | 493 | 44 | 4 | 1 | 466 | 1 | 445 | 0.0 | 729 |
| MS.gene75506.t1 | MTR_5g017260 | 48.218 | 477 | 217 | 6 | 1 | 462 | 1 | 462 | 2.03e-151 | 439 |
| MS.gene75506.t1 | MTR_1g019270 | 45.161 | 465 | 224 | 7 | 13 | 462 | 11 | 459 | 6.49e-132 | 390 |
| MS.gene75506.t1 | MTR_7g117505 | 35.317 | 504 | 262 | 8 | 13 | 467 | 8 | 496 | 6.28e-95 | 296 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75506.t1 | AT5G67050 | 45.455 | 473 | 233 | 9 | 1 | 459 | 1 | 462 | 1.62e-133 | 394 |
| MS.gene75506.t1 | AT5G42930 | 44.248 | 452 | 218 | 7 | 31 | 462 | 24 | 461 | 1.04e-127 | 379 |
| MS.gene75506.t1 | AT1G56630 | 40.825 | 485 | 241 | 10 | 13 | 466 | 7 | 476 | 3.54e-116 | 350 |
| MS.gene75506.t1 | AT1G45201 | 43.262 | 423 | 206 | 7 | 57 | 462 | 57 | 462 | 1.33e-112 | 340 |
| MS.gene75506.t1 | AT1G45201 | 43.262 | 423 | 206 | 7 | 57 | 462 | 82 | 487 | 1.82e-112 | 341 |
| MS.gene75506.t1 | AT3G14360 | 34.706 | 510 | 267 | 7 | 5 | 460 | 11 | 508 | 4.57e-99 | 307 |
| MS.gene75506.t1 | AT5G42930 | 42.400 | 375 | 182 | 7 | 31 | 385 | 24 | 384 | 7.98e-94 | 290 |
| MS.gene75506.t1 | AT1G45201 | 42.486 | 346 | 165 | 7 | 57 | 385 | 57 | 385 | 7.56e-85 | 266 |
Find 84 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATAGTAAGGTTGATTAT+TGG | 0.274444 | 3.3:-72432222 | MS.gene75506:intron |
| ATCTCATGGTTGGAGCTTCC+TGG | 0.307084 | 3.3:-72432051 | MS.gene75506:CDS |
| AACACAATGTCCTTTATATC+AGG | 0.310096 | 3.3:+72431634 | None:intergenic |
| GCATGAGGAGTCATTTCTTT+TGG | 0.319373 | 3.3:-72431800 | MS.gene75506:CDS |
| CTTCAAGGGGTTTACACATT+TGG | 0.328267 | 3.3:-72431772 | MS.gene75506:CDS |
| TGATTTGTTTCAATTTGTTT+AGG | 0.333018 | 3.3:+72431964 | None:intergenic |
| GCTTATCCATTGAAATATCT+TGG | 0.339715 | 3.3:-72435975 | MS.gene75506:CDS |
| TGTGTCTATTATTGGTCATA+TGG | 0.359041 | 3.3:-72435364 | MS.gene75506:CDS |
| GAGAAGAATTTGAAAGATAA+TGG | 0.384043 | 3.3:-72431709 | MS.gene75506:CDS |
| ACATTGTGTTTAAGCACTTT+GGG | 0.384637 | 3.3:-72431621 | MS.gene75506:CDS |
| GGTAAGGTTAACATAATCTT+GGG | 0.389871 | 3.3:+72431228 | None:intergenic |
| TTAAGAGCATTTCGGCTTGT+TGG | 0.392156 | 3.3:-72431283 | MS.gene75506:CDS |
| CTTGTTGGCTTACTAGTGCC+TGG | 0.403502 | 3.3:-72431268 | MS.gene75506:CDS |
| TAGGTTTCCTCCTGATATAA+AGG | 0.410316 | 3.3:-72431644 | MS.gene75506:CDS |
| TGGTTGGAGCTTCCTGGACT+TGG | 0.410975 | 3.3:-72432045 | MS.gene75506:CDS |
| TAATGCTGCTTTGTTTATGA+TGG | 0.415323 | 3.3:-72435292 | MS.gene75506:CDS |
| GACATTGTGTTTAAGCACTT+TGG | 0.419779 | 3.3:-72431622 | MS.gene75506:CDS |
| GCTGGTTTCATGAAAGCCTT+AGG | 0.419839 | 3.3:-72432012 | MS.gene75506:CDS |
| TTGTGGCATGCGGTGACTAC+TGG | 0.426475 | 3.3:-72434834 | MS.gene75506:CDS |
| TCGAGAAAATTGATCCCAAC+CGG | 0.427082 | 3.3:+72431206 | None:intergenic |
| TAATCTTGGGGTAAGTGATT+AGG | 0.433362 | 3.3:+72431241 | None:intergenic |
| TATGTTAACCTTACCCGGTT+GGG | 0.444416 | 3.3:-72431220 | MS.gene75506:CDS |
| GGGTAAGGTTAACATAATCT+TGG | 0.451197 | 3.3:+72431227 | None:intergenic |
| AAAGCAAAGTTTATATTGAC+TGG | 0.451591 | 3.3:-72431874 | MS.gene75506:CDS |
| GTTGCTTCTTTGTAAACCTA+AGG | 0.452412 | 3.3:+72431996 | None:intergenic |
| TGAAACTTGGCAGATTATCA+AGG | 0.466744 | 3.3:-72432191 | MS.gene75506:CDS |
| GTTATTTGATGCCGAACAAT+GGG | 0.468136 | 3.3:-72432088 | MS.gene75506:CDS |
| TGTTGTAGTTACCGCTAGCC+AGG | 0.477920 | 3.3:+72435928 | None:intergenic |
| ACAATCACCTGCCCATTGTT+CGG | 0.479610 | 3.3:+72432077 | None:intergenic |
| AGTAGTAAGCTTCAAGTGTA+TGG | 0.481831 | 3.3:+72431938 | None:intergenic |
| AAATTGATCCCAACCGGGTA+AGG | 0.484292 | 3.3:+72431212 | None:intergenic |
| ATAGCTATGATATTATTCCT+AGG | 0.487380 | 3.3:-72431663 | MS.gene75506:CDS |
| ATTGGTTGGTATTTGAAACT+TGG | 0.491827 | 3.3:-72432204 | MS.gene75506:CDS |
| TCTGACAAATTTGCTGCTAC+CGG | 0.491924 | 3.3:-72436182 | MS.gene75506:CDS |
| TTTACTAAAGAAACATTTGA+AGG | 0.493912 | 3.3:-72431905 | MS.gene75506:CDS |
| TATGGACAAGCGAGTGGAGT+TGG | 0.502914 | 3.3:-72435346 | MS.gene75506:CDS |
| ATATTGACTGGTCACAGTCT+AGG | 0.505731 | 3.3:-72431862 | MS.gene75506:CDS |
| ACATTTGGTCAACCAAGAGT+TGG | 0.509933 | 3.3:-72431757 | MS.gene75506:CDS |
| GCTCATAAGGAGCTTCACTA+TGG | 0.518248 | 3.3:-72431344 | MS.gene75506:CDS |
| ACCCATCCCTCTTGATACTC+AGG | 0.520693 | 3.3:+72431307 | None:intergenic |
| AATATGTCATCTCCAACTCT+TGG | 0.523235 | 3.3:+72431745 | None:intergenic |
| TTCACTATGGTGTCTAGGTA+TGG | 0.526854 | 3.3:-72431331 | MS.gene75506:CDS |
| GGGACATAGTTGAAAATCGT+TGG | 0.527074 | 3.3:-72435233 | MS.gene75506:CDS |
| GGAGCTTCACTATGGTGTCT+AGG | 0.529109 | 3.3:-72431336 | MS.gene75506:CDS |
| AAAGTTAGCTGTGTGTAACT+TGG | 0.530122 | 3.3:+72436094 | None:intergenic |
| ATGAAGCCAAGATATTTCAA+TGG | 0.531705 | 3.3:+72435969 | None:intergenic |
| TACAAAGAAGCAACATGGGT+TGG | 0.532370 | 3.3:-72431987 | MS.gene75506:CDS |
| AGTTATTTGATGCCGAACAA+TGG | 0.541427 | 3.3:-72432089 | MS.gene75506:CDS |
| GACCTGAGTATCAAGAGGGA+TGG | 0.541599 | 3.3:-72431309 | MS.gene75506:CDS |
| AAGATTATGTTAACCTTACC+CGG | 0.543967 | 3.3:-72431225 | MS.gene75506:CDS |
| TTATGTTAACCTTACCCGGT+TGG | 0.555126 | 3.3:-72431221 | MS.gene75506:CDS |
| TTTGATGCCGAACAATGGGC+AGG | 0.556915 | 3.3:-72432084 | MS.gene75506:CDS |
| TAGTAAGGTTGATTATTGGT+TGG | 0.560174 | 3.3:-72432218 | MS.gene75506:CDS |
| TGACATATTTGCTCAATACA+TGG | 0.562540 | 3.3:-72431731 | MS.gene75506:CDS |
| CATAGTTGAAAATCGTTGGA+AGG | 0.564748 | 3.3:-72435229 | MS.gene75506:intron |
| GGTAAGTGATTAGGTACTCC+AGG | 0.565069 | 3.3:+72431250 | None:intergenic |
| TTACTAAAGAAACATTTGAA+GGG | 0.565367 | 3.3:-72431904 | MS.gene75506:CDS |
| GAGTTGGACAAAAGCATCAA+AGG | 0.572010 | 3.3:-72435330 | MS.gene75506:CDS |
| TCATGCAACATCAATATCGC+AGG | 0.573993 | 3.3:+72431817 | None:intergenic |
| ACCTGAGTATCAAGAGGGAT+GGG | 0.576968 | 3.3:-72431308 | MS.gene75506:CDS |
| TTTCCTCTTCAAGAACCTCA+TGG | 0.578584 | 3.3:+72436063 | None:intergenic |
| TCCTCTAAAAGTTACTATGT+AGG | 0.579783 | 3.3:+72432116 | None:intergenic |
| AGGTTTACAAAGAAGCAACA+TGG | 0.584733 | 3.3:-72431992 | MS.gene75506:CDS |
| TGATAGAAACTATAATGGCA+AGG | 0.584877 | 3.3:-72431584 | MS.gene75506:intron |
| CAGGTGATTGTGATATCTCA+TGG | 0.585512 | 3.3:-72432065 | MS.gene75506:CDS |
| TTTATATCAGGAGGAAACCT+AGG | 0.585879 | 3.3:+72431646 | None:intergenic |
| ACAAAGCAGCATTATACTTG+AGG | 0.592763 | 3.3:+72435301 | None:intergenic |
| TTGTTCGGCATCAAATAACT+CGG | 0.595760 | 3.3:+72432092 | None:intergenic |
| GTGCCATGAGGTTCTTGAAG+AGG | 0.603209 | 3.3:-72436066 | MS.gene75506:CDS |
| CGAGAAAATTGATCCCAACC+GGG | 0.608715 | 3.3:+72431207 | None:intergenic |
| GGTTTACAAAGAAGCAACAT+GGG | 0.611206 | 3.3:-72431991 | MS.gene75506:CDS |
| TGGTCATATGGACAAGCGAG+TGG | 0.611878 | 3.3:-72435352 | MS.gene75506:CDS |
| TGATTGTGATATCTCATGGT+TGG | 0.618477 | 3.3:-72432061 | MS.gene75506:CDS |
| GTATGGACCTGAGTATCAAG+AGG | 0.628629 | 3.3:-72431314 | MS.gene75506:CDS |
| ACAATGTCCTTTATATCAGG+AGG | 0.632118 | 3.3:+72431637 | None:intergenic |
| AAGTTACTATGTAGGTGTCG+TGG | 0.646562 | 3.3:+72432124 | None:intergenic |
| TTGACTGGTCACAGTCTAGG+TGG | 0.654349 | 3.3:-72431859 | MS.gene75506:CDS |
| TCTTGCATAGATGGAAGTTG+TGG | 0.658461 | 3.3:-72434851 | MS.gene75506:intron |
| TGCGATATTGATGTTGCATG+AGG | 0.662471 | 3.3:-72431815 | MS.gene75506:CDS |
| GCATGCGGTGACTACTGGAA+TGG | 0.666193 | 3.3:-72434829 | MS.gene75506:intron |
| TATGGACCTGAGTATCAAGA+GGG | 0.673621 | 3.3:-72431313 | MS.gene75506:CDS |
| GTAAGGTTAACATAATCTTG+GGG | 0.683904 | 3.3:+72431229 | None:intergenic |
| TAGATGGAAGTTGTGGCATG+CGG | 0.719132 | 3.3:-72434844 | MS.gene75506:CDS |
| TAACTTTGTAGAGTGCCATG+AGG | 0.727113 | 3.3:-72436078 | MS.gene75506:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAAATAAAATTATTTTT+TGG | - | chr3.3:72434164-72434183 | MS.gene75506:intron | 0.0% |
| !! | ATAAAAATTAAATTTGATCA+TGG | + | chr3.3:72433042-72433061 | None:intergenic | 10.0% |
| !! | ATTGATACATAAAAAATTAT+GGG | + | chr3.3:72434567-72434586 | None:intergenic | 10.0% |
| !! | TTATAATTTACCTATAAAAT+TGG | - | chr3.3:72432466-72432485 | MS.gene75506:intron | 10.0% |
| !!! | AATATTTACGTTTTAAATAA+GGG | - | chr3.3:72431702-72431721 | MS.gene75506:CDS | 10.0% |
| !!! | AATCAAATTATTTGTTAATT+TGG | + | chr3.3:72434010-72434029 | None:intergenic | 10.0% |
| !!! | ACAAAATAAAAGTTTTTTTT+TGG | + | chr3.3:72434139-72434158 | None:intergenic | 10.0% |
| !!! | TAATATTTACGTTTTAAATA+AGG | - | chr3.3:72431701-72431720 | MS.gene75506:CDS | 10.0% |
| !! | AAAAATAAATTGTGCTAAAT+AGG | - | chr3.3:72434675-72434694 | MS.gene75506:intron | 15.0% |
| !! | AATATTTGTATTATGAATAC+AGG | - | chr3.3:72432687-72432706 | MS.gene75506:intron | 15.0% |
| !! | AATCTTTCAATAAGTTAAAA+TGG | + | chr3.3:72431861-72431880 | None:intergenic | 15.0% |
| !! | ATAGATATTAGAAAATATAC+GGG | + | chr3.3:72434813-72434832 | None:intergenic | 15.0% |
| !! | CATTGATACATAAAAAATTA+TGG | + | chr3.3:72434568-72434587 | None:intergenic | 15.0% |
| !! | GATAGATATTAGAAAATATA+CGG | + | chr3.3:72434814-72434833 | None:intergenic | 15.0% |
| !! | GGTAAATCTAAAAAAAAAAA+GGG | + | chr3.3:72434433-72434452 | None:intergenic | 15.0% |
| !! | TGGTAAATCTAAAAAAAAAA+AGG | + | chr3.3:72434434-72434453 | None:intergenic | 15.0% |
| !!! | ATTTATTTTAGTTTAAATGC+AGG | - | chr3.3:72434995-72435014 | MS.gene75506:intron | 15.0% |
| !!! | CTTGTTTGTATTTTTTTTTT+TGG | + | chr3.3:72432757-72432776 | None:intergenic | 15.0% |
| !!! | TTGCATTTTTCTTTTATTAA+GGG | + | chr3.3:72433753-72433772 | None:intergenic | 15.0% |
| !!! | TTTATATCAAACTCTAAAAA+AGG | + | chr3.3:72434045-72434064 | None:intergenic | 15.0% |
| !!! | TTTGCATTTTTCTTTTATTA+AGG | + | chr3.3:72433754-72433773 | None:intergenic | 15.0% |
| !!! | TTTTTTGATAGAAACTATAA+TGG | - | chr3.3:72435800-72435819 | MS.gene75506:intron | 15.0% |
| !! | AAATACAAACAAGAATGATA+TGG | - | chr3.3:72432764-72432783 | MS.gene75506:intron | 20.0% |
| !! | AATACAAACAAGAATGATAT+GGG | - | chr3.3:72432765-72432784 | MS.gene75506:intron | 20.0% |
| !! | AATCCTTAATAAGTATTCTT+AGG | - | chr3.3:72431929-72431948 | MS.gene75506:CDS | 20.0% |
| !! | AGATTTACAAAGAAAGATAT+TGG | - | chr3.3:72433416-72433435 | MS.gene75506:intron | 20.0% |
| !! | ATCCTTAATAAGTATTCTTA+GGG | - | chr3.3:72431930-72431949 | MS.gene75506:CDS | 20.0% |
| !! | ATTAATTCATAGTTGACAAA+AGG | - | chr3.3:72432442-72432461 | MS.gene75506:intron | 20.0% |
| !! | ATTGATACCTAAAAAAACAT+GGG | + | chr3.3:72434472-72434491 | None:intergenic | 20.0% |
| !! | ATTTGAACAATCATTTGATT+GGG | - | chr3.3:72433375-72433394 | MS.gene75506:intron | 20.0% |
| !! | CTATTCACACAATATATATA+GGG | + | chr3.3:72431971-72431990 | None:intergenic | 20.0% |
| !! | TATTTGAACAATCATTTGAT+TGG | - | chr3.3:72433374-72433393 | MS.gene75506:intron | 20.0% |
| !! | TTACTAAAGAAACATTTGAA+GGG | - | chr3.3:72435485-72435504 | MS.gene75506:intron | 20.0% |
| !! | TTTACTAAAGAAACATTTGA+AGG | - | chr3.3:72435484-72435503 | MS.gene75506:intron | 20.0% |
| !!! | AAAGAAAAGTAGTTTTTGTT+TGG | + | chr3.3:72435986-72436005 | None:intergenic | 20.0% |
| !!! | AAGGGATAAATATTTCTAAT+TGG | + | chr3.3:72434722-72434741 | None:intergenic | 20.0% |
| !!! | ATAATAGTAAGGTTGATTAT+TGG | - | chr3.3:72435167-72435186 | MS.gene75506:intron | 20.0% |
| !!! | GTCTTTTATAAAAGTGTAAA+AGG | + | chr3.3:72433212-72433231 | None:intergenic | 20.0% |
| !!! | TGATTTGTTTCAATTTGTTT+AGG | + | chr3.3:72435428-72435447 | None:intergenic | 20.0% |
| !!! | TTTTTTCGTTAGCATATTAT+TGG | - | chr3.3:72432281-72432300 | MS.gene75506:intron | 20.0% |
| ! | AAAAGCTAACTATTCTATCA+TGG | - | chr3.3:72431634-72431653 | MS.gene75506:CDS | 25.0% |
| ! | AAAGCAAAGTTTATATTGAC+TGG | - | chr3.3:72435515-72435534 | MS.gene75506:intron | 25.0% |
| ! | AATCATACAAAAAAAATCGC+GGG | + | chr3.3:72434777-72434796 | None:intergenic | 25.0% |
| ! | AATGCAAACACAACAATAAT+AGG | - | chr3.3:72433544-72433563 | MS.gene75506:intron | 25.0% |
| ! | ATAGCTATGATATTATTCCT+AGG | - | chr3.3:72435726-72435745 | MS.gene75506:intron | 25.0% |
| ! | ATATATTGTGTGAATAGGTA+AGG | - | chr3.3:72431974-72431993 | MS.gene75506:CDS | 25.0% |
| ! | ATGAATTCTCTTCTTGAAAT+CGG | - | chr3.3:72432342-72432361 | MS.gene75506:intron | 25.0% |
| ! | ATTAAATTTGATCATGGTTC+TGG | + | chr3.3:72433036-72433055 | None:intergenic | 25.0% |
| ! | CATTGATACCTAAAAAAACA+TGG | + | chr3.3:72434473-72434492 | None:intergenic | 25.0% |
| ! | CCTATATATATTGTGTGAAT+AGG | - | chr3.3:72431969-72431988 | MS.gene75506:CDS | 25.0% |
| ! | CCTATTCACACAATATATAT+AGG | + | chr3.3:72431972-72431991 | None:intergenic | 25.0% |
| ! | GAATCATACAAAAAAAATCG+CGG | + | chr3.3:72434778-72434797 | None:intergenic | 25.0% |
| ! | GAGAAGAATTTGAAAGATAA+TGG | - | chr3.3:72435680-72435699 | MS.gene75506:intron | 25.0% |
| ! | GTGATTGATACATAGATAAA+AGG | + | chr3.3:72434400-72434419 | None:intergenic | 25.0% |
| ! | GTTTATAAATGGGGATAATT+CGG | + | chr3.3:72433014-72433033 | None:intergenic | 25.0% |
| ! | TAAATGCAGGTAATGAATAT+GGG | - | chr3.3:72435008-72435027 | MS.gene75506:intron | 25.0% |
| ! | TAAGTTGTGGAAATACATTA+GGG | - | chr3.3:72434896-72434915 | MS.gene75506:intron | 25.0% |
| ! | TAGTAAAAAATATCTGCAAC+AGG | - | chr3.3:72432657-72432676 | MS.gene75506:intron | 25.0% |
| ! | TATGCTCAAATGATATGAAT+GGG | + | chr3.3:72432639-72432658 | None:intergenic | 25.0% |
| ! | TCTTGAACTCCAAAAATATT+GGG | - | chr3.3:72431238-72431257 | MS.gene75506:CDS | 25.0% |
| ! | TGCTGAAAAGAAACTAATTA+AGG | + | chr3.3:72432250-72432269 | None:intergenic | 25.0% |
| ! | TTAAATGCAGGTAATGAATA+TGG | - | chr3.3:72435007-72435026 | MS.gene75506:intron | 25.0% |
| ! | TTCTTGAACTCCAAAAATAT+TGG | - | chr3.3:72431237-72431256 | MS.gene75506:CDS | 25.0% |
| ! | TTTATAAATGGGGATAATTC+GGG | + | chr3.3:72433013-72433032 | None:intergenic | 25.0% |
| ! | TTTCTCCAACAAGTAATTTA+TGG | + | chr3.3:72433318-72433337 | None:intergenic | 25.0% |
| !! | ATCATTTTGAACTTTCTACA+GGG | - | chr3.3:72431492-72431511 | MS.gene75506:intron | 25.0% |
| !! | TTCAAAGAACCCAATATTTT+TGG | + | chr3.3:72431250-72431269 | None:intergenic | 25.0% |
| !!! | AACAACAATCTGACTTTTTT+TGG | + | chr3.3:72433891-72433910 | None:intergenic | 25.0% |
| !!! | AATTAGTTTCTTTTCAGCAA+AGG | - | chr3.3:72432251-72432270 | MS.gene75506:intron | 25.0% |
| !!! | ATTAGTTTCTTTTCAGCAAA+GGG | - | chr3.3:72432252-72432271 | MS.gene75506:intron | 25.0% |
| !!! | CAAAAACTACTTTTCTTTGT+CGG | - | chr3.3:72435988-72436007 | MS.gene75506:CDS | 25.0% |
| !!! | CATCTCTTAATTTTTTTTCC+AGG | + | chr3.3:72433960-72433979 | None:intergenic | 25.0% |
| !!! | CATGTTTTTTTAGGTATCAA+TGG | - | chr3.3:72434471-72434490 | MS.gene75506:intron | 25.0% |
| !!! | CTATTTCGAGTCTATATTTT+TGG | - | chr3.3:72431270-72431289 | MS.gene75506:CDS | 25.0% |
| !!! | GTATCAATGGCTATTTTTTT+CGG | - | chr3.3:72434484-72434503 | MS.gene75506:intron | 25.0% |
| !!! | TACGTTTTAAATAAGGGTTA+AGG | - | chr3.3:72431708-72431727 | MS.gene75506:CDS | 25.0% |
| !!! | TATATGTGCGATTTTAGAAA+TGG | - | chr3.3:72432840-72432859 | MS.gene75506:intron | 25.0% |
| !!! | TATTTCTCCCATGTTTTTTT+AGG | - | chr3.3:72434462-72434481 | MS.gene75506:intron | 25.0% |
| !!! | TTTGGTTCTTGATTAGAATA+TGG | + | chr3.3:72433873-72433892 | None:intergenic | 25.0% |
| AAAGTGTAAAAGGTCAAAGT+GGG | + | chr3.3:72433202-72433221 | None:intergenic | 30.0% | |
| AACACAATGTCCTTTATATC+AGG | + | chr3.3:72435758-72435777 | None:intergenic | 30.0% | |
| AAGATTATGTTAACCTTACC+CGG | - | chr3.3:72436164-72436183 | MS.gene75506:CDS | 30.0% | |
| ACACTTAGCATTATGTAAAG+AGG | + | chr3.3:72433354-72433373 | None:intergenic | 30.0% | |
| ACATTGTGTTTAAGCACTTT+GGG | - | chr3.3:72435768-72435787 | MS.gene75506:intron | 30.0% | |
| AGATTTAGACCTTAAGTAAG+TGG | + | chr3.3:72432410-72432429 | None:intergenic | 30.0% | |
| ATGAAGCCAAGATATTTCAA+TGG | + | chr3.3:72431423-72431442 | None:intergenic | 30.0% | |
| ATGGGAGAAATATTTGTCAT+TGG | + | chr3.3:72434454-72434473 | None:intergenic | 30.0% | |
| CACTTAGCATTATGTAAAGA+GGG | + | chr3.3:72433353-72433372 | None:intergenic | 30.0% | |
| CCTGGATCAAAATAATAGTA+AGG | - | chr3.3:72435156-72435175 | MS.gene75506:intron | 30.0% | |
| CGAGACATTTATTTGTTTGA+TGG | + | chr3.3:72432924-72432943 | None:intergenic | 30.0% | |
| CTAAGTTGTGGAAATACATT+AGG | - | chr3.3:72434895-72434914 | MS.gene75506:intron | 30.0% | |
| CTATGCTCAAATGATATGAA+TGG | + | chr3.3:72432640-72432659 | None:intergenic | 30.0% | |
| GATGACAATGAATAAGTTCT+AGG | + | chr3.3:72435137-72435156 | None:intergenic | 30.0% | |
| GCTTATCCATTGAAATATCT+TGG | - | chr3.3:72431414-72431433 | MS.gene75506:CDS | 30.0% | |
| GGTAAGGTTAACATAATCTT+GGG | + | chr3.3:72436164-72436183 | None:intergenic | 30.0% | |
| GTAAGGTTAACATAATCTTG+GGG | + | chr3.3:72436163-72436182 | None:intergenic | 30.0% | |
| TCATTTGATTGGGAACTTAT+AGG | - | chr3.3:72433385-72433404 | MS.gene75506:intron | 30.0% | |
| TCGTTAGCATATTATTGGTA+TGG | - | chr3.3:72432286-72432305 | MS.gene75506:intron | 30.0% | |
| TGACATATTTGCTCAATACA+TGG | - | chr3.3:72435658-72435677 | MS.gene75506:intron | 30.0% | |
| TGATAGAAACTATAATGGCA+AGG | - | chr3.3:72435805-72435824 | MS.gene75506:intron | 30.0% | |
| TGCCCTAAGAATACTTATTA+AGG | + | chr3.3:72431935-72431954 | None:intergenic | 30.0% | |
| TGTGTCTATTATTGGTCATA+TGG | - | chr3.3:72432025-72432044 | MS.gene75506:CDS | 30.0% | |
| ! | AAAAGTGTAAAAGGTCAAAG+TGG | + | chr3.3:72433203-72433222 | None:intergenic | 30.0% |
| ! | AATGTTGTTTGATGTCATTG+TGG | - | chr3.3:72433245-72433264 | MS.gene75506:intron | 30.0% |
| ! | ACCTACATAGTAACTTTTAG+AGG | - | chr3.3:72435272-72435291 | MS.gene75506:CDS | 30.0% |
| ! | ACGAGAATGAAGCTTTTATA+CGG | - | chr3.3:72432135-72432154 | MS.gene75506:CDS | 30.0% |
| ! | ATGTTGTTTGATGTCATTGT+GGG | - | chr3.3:72433246-72433265 | MS.gene75506:intron | 30.0% |
| ! | CAAACTCTAAAAAAGGTAAG+TGG | + | chr3.3:72434038-72434057 | None:intergenic | 30.0% |
| ! | GATCATTTTGAACTTTCTAC+AGG | - | chr3.3:72431491-72431510 | MS.gene75506:intron | 30.0% |
| ! | GCAGATTTTGTGTCTATTAT+TGG | - | chr3.3:72432017-72432036 | MS.gene75506:CDS | 30.0% |
| ! | TAGTAAGGTTGATTATTGGT+TGG | - | chr3.3:72435171-72435190 | MS.gene75506:intron | 30.0% |
| ! | TCCTCTAAAAGTTACTATGT+AGG | + | chr3.3:72435276-72435295 | None:intergenic | 30.0% |
| !! | AATGTCAGTGAATGCTTTTT+GGG | - | chr3.3:72436021-72436040 | MS.gene75506:CDS | 30.0% |
| !! | ATGGTTCTGGTTTATAAATG+GGG | + | chr3.3:72433023-72433042 | None:intergenic | 30.0% |
| !! | ATTTCCATAGTGGATTCAAA+GGG | - | chr3.3:72434871-72434890 | MS.gene75506:intron | 30.0% |
| !! | CATGGTTCTGGTTTATAAAT+GGG | + | chr3.3:72433024-72433043 | None:intergenic | 30.0% |
| !! | GACAATTTACTTTTAGCTAG+TGG | + | chr3.3:72432492-72432511 | None:intergenic | 30.0% |
| !! | TAATGCTGCTTTGTTTATGA+TGG | - | chr3.3:72432097-72432116 | MS.gene75506:CDS | 30.0% |
| !! | TCATGGTTCTGGTTTATAAA+TGG | + | chr3.3:72433025-72433044 | None:intergenic | 30.0% |
| !!! | CCTTACTATTATTTTGATCC+AGG | + | chr3.3:72435159-72435178 | None:intergenic | 30.0% |
| !!! | TGTTGAGTTATTTTTGAACC+TGG | - | chr3.3:72431443-72431462 | MS.gene75506:intron | 30.0% |
| !!! | TTTTTTGTCTCTCCAAATTG+CGG | - | chr3.3:72435092-72435111 | MS.gene75506:intron | 30.0% |
| AAAGTTAGCTGTGTGTAACT+TGG | + | chr3.3:72431298-72431317 | None:intergenic | 35.0% | |
| AATATGTCATCTCCAACTCT+TGG | + | chr3.3:72435647-72435666 | None:intergenic | 35.0% | |
| ACAAAGCAGCATTATACTTG+AGG | + | chr3.3:72432091-72432110 | None:intergenic | 35.0% | |
| ACAATGTCCTTTATATCAGG+AGG | + | chr3.3:72435755-72435774 | None:intergenic | 35.0% | |
| ACACATGAACCACTTACTTA+AGG | - | chr3.3:72432398-72432417 | MS.gene75506:intron | 35.0% | |
| AGGAATAAAGTCATCTTCGA+AGG | + | chr3.3:72433099-72433118 | None:intergenic | 35.0% | |
| AGGTTTACAAAGAAGCAACA+TGG | - | chr3.3:72435397-72435416 | MS.gene75506:CDS | 35.0% | |
| AGTAGTAAGCTTCAAGTGTA+TGG | + | chr3.3:72435454-72435473 | None:intergenic | 35.0% | |
| AGTTATTTGATGCCGAACAA+TGG | - | chr3.3:72435300-72435319 | MS.gene75506:CDS | 35.0% | |
| ATCAGATACACAACTTTAGC+AGG | - | chr3.3:72433060-72433079 | MS.gene75506:intron | 35.0% | |
| ATGATATGAATGGGAGAGTA+TGG | + | chr3.3:72432630-72432649 | None:intergenic | 35.0% | |
| CACAAGGAAAAAAATCTTCG+TGG | + | chr3.3:72431571-72431590 | None:intergenic | 35.0% | |
| CATAGTTGAAAATCGTTGGA+AGG | - | chr3.3:72432160-72432179 | MS.gene75506:CDS | 35.0% | |
| GAACTTATTCATTGTCATCC+TGG | - | chr3.3:72435138-72435157 | MS.gene75506:intron | 35.0% | |
| GACATTGTGTTTAAGCACTT+TGG | - | chr3.3:72435767-72435786 | MS.gene75506:intron | 35.0% | |
| GCACAAAAGTAGACATGAAT+TGG | - | chr3.3:72431667-72431686 | MS.gene75506:CDS | 35.0% | |
| GGAGTTCAAGAACAAAAAAC+CGG | + | chr3.3:72431229-72431248 | None:intergenic | 35.0% | |
| GGGTAAGGTTAACATAATCT+TGG | + | chr3.3:72436165-72436184 | None:intergenic | 35.0% | |
| GGTTTACAAAGAAGCAACAT+GGG | - | chr3.3:72435398-72435417 | MS.gene75506:CDS | 35.0% | |
| GTTATTTGATGCCGAACAAT+GGG | - | chr3.3:72435301-72435320 | MS.gene75506:CDS | 35.0% | |
| GTTGCTTCTTTGTAAACCTA+AGG | + | chr3.3:72435396-72435415 | None:intergenic | 35.0% | |
| TAAGATCTCTACTGTAGTCT+GGG | - | chr3.3:72435063-72435082 | MS.gene75506:intron | 35.0% | |
| TAATCTTGGGGTAAGTGATT+AGG | + | chr3.3:72436151-72436170 | None:intergenic | 35.0% | |
| TAGGTTTCCTCCTGATATAA+AGG | - | chr3.3:72435745-72435764 | MS.gene75506:intron | 35.0% | |
| TCACGCCATAAATTACTTGT+TGG | - | chr3.3:72433310-72433329 | MS.gene75506:intron | 35.0% | |
| TGAAACTTGGCAGATTATCA+AGG | - | chr3.3:72435198-72435217 | MS.gene75506:intron | 35.0% | |
| TGATTGTGATATCTCATGGT+TGG | - | chr3.3:72435328-72435347 | MS.gene75506:CDS | 35.0% | |
| TGTAAGATTACACCACCAAT+TGG | - | chr3.3:72432976-72432995 | MS.gene75506:intron | 35.0% | |
| TTAAGATCTCTACTGTAGTC+TGG | - | chr3.3:72435062-72435081 | MS.gene75506:intron | 35.0% | |
| TTAGCATTATGTAAAGAGGG+AGG | + | chr3.3:72433350-72433369 | None:intergenic | 35.0% | |
| TTGTTCGGCATCAAATAACT+CGG | + | chr3.3:72435300-72435319 | None:intergenic | 35.0% | |
| TTTATATCAGGAGGAAACCT+AGG | + | chr3.3:72435746-72435765 | None:intergenic | 35.0% | |
| ! | AAAAAGTGTGCAAATCCACA+AGG | + | chr3.3:72431587-72431606 | None:intergenic | 35.0% |
| ! | AAGTGGGTGAATTTTCAACA+TGG | + | chr3.3:72433186-72433205 | None:intergenic | 35.0% |
| ! | CAATGTCAGTGAATGCTTTT+TGG | - | chr3.3:72436020-72436039 | MS.gene75506:CDS | 35.0% |
| ! | CGAGAATGAAGCTTTTATAC+GGG | - | chr3.3:72432136-72432155 | MS.gene75506:CDS | 35.0% |
| ! | GGACACAAATTTGTCTTTTG+TGG | + | chr3.3:72434273-72434292 | None:intergenic | 35.0% |
| ! | GTAGTTGGATTGGAGTAAAT+GGG | + | chr3.3:72433277-72433296 | None:intergenic | 35.0% |
| ! | GTGTTCAATTTTCCAATTGG+TGG | + | chr3.3:72432991-72433010 | None:intergenic | 35.0% |
| ! | TAGCTAGTGGCCAATTTTAT+AGG | + | chr3.3:72432479-72432498 | None:intergenic | 35.0% |
| ! | TGTTGTAGTGTGGTGTTTTT+AGG | + | chr3.3:72433127-72433146 | None:intergenic | 35.0% |
| ! | TGTTGTTTGATGTCATTGTG+GGG | - | chr3.3:72433247-72433266 | MS.gene75506:intron | 35.0% |
| ! | TGTTTGTATTTGATAGCCGA+CGG | + | chr3.3:72431615-72431634 | None:intergenic | 35.0% |
| ! | TTTTTGTCTCTCCAAATTGC+GGG | - | chr3.3:72435093-72435112 | MS.gene75506:intron | 35.0% |
| ! | TTTTTGTGCTCTTGCATAGA+TGG | - | chr3.3:72432529-72432548 | MS.gene75506:intron | 35.0% |
| !! | ACATTTTCAGAAAGTGCAAG+AGG | - | chr3.3:72435958-72435977 | MS.gene75506:CDS | 35.0% |
| !! | CAAAAAGCATTCACTGACAT+TGG | + | chr3.3:72436022-72436041 | None:intergenic | 35.0% |
| !! | CAACATTGTTTGTTGTAGTG+TGG | + | chr3.3:72433137-72433156 | None:intergenic | 35.0% |
| !! | CATTTCCATAGTGGATTCAA+AGG | - | chr3.3:72434870-72434889 | MS.gene75506:intron | 35.0% |
| !! | CTCACTTAAGCTCTAAAATG+AGG | + | chr3.3:72433609-72433628 | None:intergenic | 35.0% |
| !! | GTTGTAGTGTGGTGTTTTTA+GGG | + | chr3.3:72433126-72433145 | None:intergenic | 35.0% |
| !!! | CACGAAGATTTTTTTCCTTG+TGG | - | chr3.3:72431569-72431588 | MS.gene75506:intron | 35.0% |
| !!! | GATGGGTTTTAAGAGCATTT+CGG | - | chr3.3:72436098-72436117 | MS.gene75506:CDS | 35.0% |
| !!! | TTATTTTTGAACCTGGCTAG+CGG | - | chr3.3:72431450-72431469 | MS.gene75506:intron | 35.0% |
| AACATATCATCTCTCCAACC+AGG | - | chr3.3:72433681-72433700 | MS.gene75506:intron | 40.0% | |
| ACATATCATCTCTCCAACCA+GGG | - | chr3.3:72433682-72433701 | MS.gene75506:intron | 40.0% | |
| ACATTTGGTCAACCAAGAGT+TGG | - | chr3.3:72435632-72435651 | MS.gene75506:intron | 40.0% | |
| AGCGTACATGTATCACATGT+GGG | - | chr3.3:72435037-72435056 | MS.gene75506:intron | 40.0% | |
| AGTTGTGTCTCCACTTTGAT+TGG | + | chr3.3:72433713-72433732 | None:intergenic | 40.0% | |
| CAATCCAACTACGTACTTCA+CGG | - | chr3.3:72433285-72433304 | MS.gene75506:intron | 40.0% | |
| CACAATGTTGAAGTTGAACC+TGG | - | chr3.3:72433939-72433958 | MS.gene75506:intron | 40.0% | |
| CAGGTGATTGTGATATCTCA+TGG | - | chr3.3:72435324-72435343 | MS.gene75506:CDS | 40.0% | |
| CAGGTTCAACTTCAACATTG+TGG | + | chr3.3:72433941-72433960 | None:intergenic | 40.0% | |
| CGTATGTGTCCACAACTAAA+CGG | + | chr3.3:72432322-72432341 | None:intergenic | 40.0% | |
| CTCAACGATCATTTCCATAG+TGG | - | chr3.3:72434861-72434880 | MS.gene75506:intron | 40.0% | |
| CTTCAAGGGGTTTACACATT+TGG | - | chr3.3:72435617-72435636 | MS.gene75506:intron | 40.0% | |
| GATTCAAAGGGTCTAAGTTG+TGG | - | chr3.3:72434883-72434902 | MS.gene75506:intron | 40.0% | |
| GGGACATAGTTGAAAATCGT+TGG | - | chr3.3:72432156-72432175 | MS.gene75506:CDS | 40.0% | |
| GTTGTGTCTCCACTTTGATT+GGG | + | chr3.3:72433712-72433731 | None:intergenic | 40.0% | |
| TACAAAGAAGCAACATGGGT+TGG | - | chr3.3:72435402-72435421 | MS.gene75506:intron | 40.0% | |
| TAGACCCTTTGAATCCACTA+TGG | + | chr3.3:72434878-72434897 | None:intergenic | 40.0% | |
| TATGGACCTGAGTATCAAGA+GGG | - | chr3.3:72436076-72436095 | MS.gene75506:CDS | 40.0% | |
| TATGTTAACCTTACCCGGTT+GGG | - | chr3.3:72436169-72436188 | MS.gene75506:CDS | 40.0% | |
| TCATGCAACATCAATATCGC+AGG | + | chr3.3:72435575-72435594 | None:intergenic | 40.0% | |
| TCGAGAAAATTGATCCCAAC+CGG | + | chr3.3:72436186-72436205 | None:intergenic | 40.0% | |
| TCTTGCATAGATGGAAGTTG+TGG | - | chr3.3:72432538-72432557 | MS.gene75506:intron | 40.0% | |
| TGCGATATTGATGTTGCATG+AGG | - | chr3.3:72435574-72435593 | MS.gene75506:intron | 40.0% | |
| TTATGTTAACCTTACCCGGT+TGG | - | chr3.3:72436168-72436187 | MS.gene75506:CDS | 40.0% | |
| TTCACTATGGTGTCTAGGTA+TGG | - | chr3.3:72436058-72436077 | MS.gene75506:CDS | 40.0% | |
| TTGTGTCTCCACTTTGATTG+GGG | + | chr3.3:72433711-72433730 | None:intergenic | 40.0% | |
| TTTCCTCTTCAAGAACCTCA+TGG | + | chr3.3:72431329-72431348 | None:intergenic | 40.0% | |
| ! | AAGTTACTATGTAGGTGTCG+TGG | + | chr3.3:72435268-72435287 | None:intergenic | 40.0% |
| ! | ATATTGACTGGTCACAGTCT+AGG | - | chr3.3:72435527-72435546 | MS.gene75506:intron | 40.0% |
| ! | CGGGTGTTCAATTTTCCAAT+TGG | + | chr3.3:72432994-72433013 | None:intergenic | 40.0% |
| ! | CGTAGTTGGATTGGAGTAAA+TGG | + | chr3.3:72433278-72433297 | None:intergenic | 40.0% |
| ! | GCATGAGGAGTCATTTCTTT+TGG | - | chr3.3:72435589-72435608 | MS.gene75506:intron | 40.0% |
| ! | TAACTTTGTAGAGTGCCATG+AGG | - | chr3.3:72431311-72431330 | MS.gene75506:CDS | 40.0% |
| !! | AATGATCGTTGAGTTGACAG+CGG | + | chr3.3:72434854-72434873 | None:intergenic | 40.0% |
| !! | AGGAGTCATTTCTTTTGGAG+AGG | - | chr3.3:72435594-72435613 | MS.gene75506:intron | 40.0% |
| !! | ATGCTTTTTGGGAGCTCATA+AGG | - | chr3.3:72436032-72436051 | MS.gene75506:CDS | 40.0% |
| !! | GAGTTGGACAAAAGCATCAA+AGG | - | chr3.3:72432059-72432078 | MS.gene75506:CDS | 40.0% |
| !! | TCTGACAAATTTGCTGCTAC+CGG | - | chr3.3:72431207-72431226 | MS.gene75506:CDS | 40.0% |
| !! | TTAAGAGCATTTCGGCTTGT+TGG | - | chr3.3:72436106-72436125 | MS.gene75506:CDS | 40.0% |
| !! | TTCTTTTGGAGAGGCTTCAA+GGG | - | chr3.3:72435603-72435622 | MS.gene75506:intron | 40.0% |
| !! | TTTCTTTTGGAGAGGCTTCA+AGG | - | chr3.3:72435602-72435621 | MS.gene75506:intron | 40.0% |
| AAATTGATCCCAACCGGGTA+AGG | + | chr3.3:72436180-72436199 | None:intergenic | 45.0% | |
| ACAATCACCTGCCCATTGTT+CGG | + | chr3.3:72435315-72435334 | None:intergenic | 45.0% | |
| ACCTGAGTATCAAGAGGGAT+GGG | - | chr3.3:72436081-72436100 | MS.gene75506:CDS | 45.0% | |
| ATGTGTCCACAACTAAACGG+CGG | + | chr3.3:72432319-72432338 | None:intergenic | 45.0% | |
| CGAGAAAATTGATCCCAACC+GGG | + | chr3.3:72436185-72436204 | None:intergenic | 45.0% | |
| CGTGAAGTACGTAGTTGGAT+TGG | + | chr3.3:72433287-72433306 | None:intergenic | 45.0% | |
| GAGCGTACATGTATCACATG+TGG | - | chr3.3:72435036-72435055 | MS.gene75506:intron | 45.0% | |
| GCTCATAAGGAGCTTCACTA+TGG | - | chr3.3:72436045-72436064 | MS.gene75506:CDS | 45.0% | |
| GGACTTGGAAAAACTCATGC+TGG | - | chr3.3:72435359-72435378 | MS.gene75506:CDS | 45.0% | |
| GGTAAGTGATTAGGTACTCC+AGG | + | chr3.3:72436142-72436161 | None:intergenic | 45.0% | |
| GTATGGACCTGAGTATCAAG+AGG | - | chr3.3:72436075-72436094 | MS.gene75506:CDS | 45.0% | |
| TAGATGGAAGTTGTGGCATG+CGG | - | chr3.3:72432545-72432564 | MS.gene75506:intron | 45.0% | |
| TAGTGTGCTAACCTGTGCTA+CGG | - | chr3.3:72434227-72434246 | MS.gene75506:intron | 45.0% | |
| ! | GCATGAGTTTTTCCAAGTCC+AGG | + | chr3.3:72435359-72435378 | None:intergenic | 45.0% |
| ! | GCTGGTTTCATGAAAGCCTT+AGG | - | chr3.3:72435377-72435396 | MS.gene75506:CDS | 45.0% |
| !! | ATGATCGTTGAGTTGACAGC+GGG | + | chr3.3:72434853-72434872 | None:intergenic | 45.0% |
| !! | TCTTTTGGAGAGGCTTCAAG+GGG | - | chr3.3:72435604-72435623 | MS.gene75506:intron | 45.0% |
| !!! | GCACACTTTTTCTGTTCCGT+CGG | - | chr3.3:72431596-72431615 | MS.gene75506:CDS | 45.0% |
| !!! | TGTGGTGTTTTTAGGGTGCA+AGG | + | chr3.3:72433119-72433138 | None:intergenic | 45.0% |
| !! | AATGATAAATATTTAAAAAA+AGG | + | chr3.3:72434741-72434760 | None:intergenic | 5.0% |
| !! | ACTAATAAATATAAAAATAT+AGG | + | chr3.3:72434294-72434313 | None:intergenic | 5.0% |
| !! | ATGATAAATATTTAAAAAAA+GGG | + | chr3.3:72434740-72434759 | None:intergenic | 5.0% |
| !! | TTGATAAATATATAAAAATT+GGG | + | chr3.3:72434640-72434659 | None:intergenic | 5.0% |
| !! | TTTGATAAATATATAAAAAT+TGG | + | chr3.3:72434641-72434660 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTGA+GGG | + | chr3.3:72435851-72435870 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTTG+AGG | + | chr3.3:72435852-72435871 | None:intergenic | 5.0% |
| ACCCATCCCTCTTGATACTC+AGG | + | chr3.3:72436085-72436104 | None:intergenic | 50.0% | |
| AGTGTGCTAACCTGTGCTAC+GGG | - | chr3.3:72434228-72434247 | MS.gene75506:intron | 50.0% | |
| ATCTCATGGTTGGAGCTTCC+TGG | - | chr3.3:72435338-72435357 | MS.gene75506:CDS | 50.0% | |
| GAAGCCGTGAAGTACGTAGT+TGG | + | chr3.3:72433292-72433311 | None:intergenic | 50.0% | |
| GACCTGAGTATCAAGAGGGA+TGG | - | chr3.3:72436080-72436099 | MS.gene75506:CDS | 50.0% | |
| GGAGCTTCACTATGGTGTCT+AGG | - | chr3.3:72436053-72436072 | MS.gene75506:CDS | 50.0% | |
| GTGCCATGAGGTTCTTGAAG+AGG | - | chr3.3:72431323-72431342 | MS.gene75506:CDS | 50.0% | |
| TATGGACAAGCGAGTGGAGT+TGG | - | chr3.3:72432043-72432062 | MS.gene75506:CDS | 50.0% | |
| TGGTCATATGGACAAGCGAG+TGG | - | chr3.3:72432037-72432056 | MS.gene75506:CDS | 50.0% | |
| TGTGTCCACAACTAAACGGC+GGG | + | chr3.3:72432318-72432337 | None:intergenic | 50.0% | |
| TGTTGTAGTTACCGCTAGCC+AGG | + | chr3.3:72431464-72431483 | None:intergenic | 50.0% | |
| TTTGATGCCGAACAATGGGC+AGG | - | chr3.3:72435305-72435324 | MS.gene75506:CDS | 50.0% | |
| ! | GTTTTCCCGCCGTTTAGTTG+TGG | - | chr3.3:72432310-72432329 | MS.gene75506:intron | 50.0% |
| ! | TTGACTGGTCACAGTCTAGG+TGG | - | chr3.3:72435530-72435549 | MS.gene75506:intron | 50.0% |
| !! | CTTGTTGGCTTACTAGTGCC+TGG | - | chr3.3:72436121-72436140 | MS.gene75506:CDS | 50.0% |
| CACTTTGATTGGGGTGACCC+TGG | + | chr3.3:72433702-72433721 | None:intergenic | 55.0% | |
| CAGGGTCACCCCAATCAAAG+TGG | - | chr3.3:72433700-72433719 | MS.gene75506:intron | 55.0% | |
| CTCTCCAAATTGCGGGTACG+AGG | - | chr3.3:72435100-72435119 | MS.gene75506:intron | 55.0% | |
| GCATGCGGTGACTACTGGAA+TGG | - | chr3.3:72432560-72432579 | MS.gene75506:intron | 55.0% | |
| GTGTGCTAACCTGTGCTACG+GGG | - | chr3.3:72434229-72434248 | MS.gene75506:intron | 55.0% | |
| TCGTCCTCGTACCCGCAATT+TGG | + | chr3.3:72435107-72435126 | None:intergenic | 55.0% | |
| TGGTTGGAGCTTCCTGGACT+TGG | - | chr3.3:72435344-72435363 | MS.gene75506:CDS | 55.0% | |
| TTGATTGGGGTGACCCTGGT+TGG | + | chr3.3:72433698-72433717 | None:intergenic | 55.0% | |
| TTGTGGCATGCGGTGACTAC+TGG | - | chr3.3:72432555-72432574 | MS.gene75506:intron | 55.0% | |
| CACATGTCACCCCGTAGCAC+AGG | + | chr3.3:72434241-72434260 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 72431195 | 72436216 | 72431195 | ID=MS.gene75506 |
| chr3.3 | mRNA | 72431195 | 72436216 | 72431195 | ID=MS.gene75506.t1;Parent=MS.gene75506 |
| chr3.3 | exon | 72435940 | 72436216 | 72435940 | ID=MS.gene75506.t1.exon1;Parent=MS.gene75506.t1 |
| chr3.3 | CDS | 72435940 | 72436216 | 72435940 | ID=cds.MS.gene75506.t1;Parent=MS.gene75506.t1 |
| chr3.3 | exon | 72435230 | 72435420 | 72435230 | ID=MS.gene75506.t1.exon2;Parent=MS.gene75506.t1 |
| chr3.3 | CDS | 72435230 | 72435420 | 72435230 | ID=cds.MS.gene75506.t1;Parent=MS.gene75506.t1 |
| chr3.3 | exon | 72434830 | 72434863 | 72434830 | ID=MS.gene75506.t1.exon3;Parent=MS.gene75506.t1 |
| chr3.3 | CDS | 72434830 | 72434863 | 72434830 | ID=cds.MS.gene75506.t1;Parent=MS.gene75506.t1 |
| chr3.3 | exon | 72431585 | 72432237 | 72431585 | ID=MS.gene75506.t1.exon4;Parent=MS.gene75506.t1 |
| chr3.3 | CDS | 72431585 | 72432237 | 72431585 | ID=cds.MS.gene75506.t1;Parent=MS.gene75506.t1 |
| chr3.3 | exon | 72431195 | 72431443 | 72431195 | ID=MS.gene75506.t1.exon5;Parent=MS.gene75506.t1 |
| chr3.3 | CDS | 72431195 | 72431443 | 72431195 | ID=cds.MS.gene75506.t1;Parent=MS.gene75506.t1 |
| Gene Sequence |
| Protein sequence |
