Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75529.t1 | RHN69325.1 | 95.5 | 616 | 28 | 0 | 1 | 616 | 1 | 616 | 2.90E-272 | 947.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75529.t1 | Q0WPZ7 | 45.6 | 607 | 274 | 10 | 15 | 609 | 21 | 583 | 4.1e-81 | 303.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75529.t1 | G7J344 | 95.5 | 616 | 28 | 0 | 1 | 616 | 4 | 619 | 2.1e-272 | 947.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene75529 | MS.gene86831 | PPI |
MS.gene75529 | MS.gene004979 | PPI |
MS.gene75529 | MS.gene065809 | PPI |
MS.gene07517 | MS.gene75529 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75529.t1 | MTR_3g086460 | 95.617 | 616 | 27 | 0 | 1 | 616 | 4 | 619 | 0.0 | 1117 |
MS.gene75529.t1 | MTR_7g034350 | 53.476 | 187 | 43 | 3 | 431 | 616 | 4 | 147 | 1.24e-55 | 186 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75529.t1 | AT1G13120 | 42.251 | 613 | 291 | 15 | 15 | 611 | 21 | 586 | 6.29e-144 | 431 |
MS.gene75529.t1 | AT4G05523 | 30.952 | 210 | 103 | 8 | 15 | 213 | 21 | 199 | 1.12e-19 | 88.6 |
Find 119 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCGGAATATAAAGCAAATA+AGG | 0.196341 | 3.3:+72191531 | MS.gene75529:CDS |
CAAGAGAAAGGTTGCTTTGC+AGG | 0.219008 | 3.3:+72189974 | MS.gene75529:CDS |
TTCCATTGCTGCCTTTGTTT+TGG | 0.224984 | 3.3:-72190397 | None:intergenic |
CCTTGGTGTCAGTATTTAAT+AGG | 0.247209 | 3.3:-72190506 | None:intergenic |
TGTTGAGATATTAATTAAAA+AGG | 0.253115 | 3.3:+72192286 | MS.gene75529:CDS |
CCCTTATTTGCTTTATATTC+CGG | 0.260197 | 3.3:-72191532 | None:intergenic |
GACTGCAGGTTCCTTCCTTC+TGG | 0.268189 | 3.3:-72194237 | None:intergenic |
CCTTATTTGCTTTATATTCC+GGG | 0.310245 | 3.3:-72191531 | None:intergenic |
TTGTAGGGGAGCTATGAAAT+TGG | 0.312211 | 3.3:+72188274 | None:intergenic |
TACTTCCTCGGCTTTAAGTT+TGG | 0.326776 | 3.3:-72190331 | None:intergenic |
AAAGCACCTGGTTTACAAAA+AGG | 0.349016 | 3.3:+72193249 | MS.gene75529:CDS |
CAAAGAAACAAGGCAGGAAT+TGG | 0.357926 | 3.3:+72189197 | MS.gene75529:CDS |
GGTGTACGGTGCACTGGTTC+AGG | 0.362844 | 3.3:+72193735 | MS.gene75529:CDS |
AGCAAAATATCCATTACATA+TGG | 0.370046 | 3.3:-72193190 | None:intergenic |
CCGGAATATAAAGCAAATAA+GGG | 0.387902 | 3.3:+72191532 | MS.gene75529:CDS |
CTGCAAAGCAACCTTTCTCT+TGG | 0.394273 | 3.3:-72189973 | None:intergenic |
CGTCTCCGAGCTCAATGCTT+TGG | 0.394800 | 3.3:+72188355 | MS.gene75529:CDS |
GGGGCATAAGGGACAATGTT+AGG | 0.399453 | 3.3:+72191552 | MS.gene75529:CDS |
AAGAAATTGAGAAAGGTAGA+AGG | 0.400427 | 3.3:+72188605 | MS.gene75529:CDS |
TTCCGATGTTGACTCTGCTT+TGG | 0.402079 | 3.3:+72188851 | MS.gene75529:CDS |
TAAAGCAAATAAGGGGCATA+AGG | 0.403299 | 3.3:+72191540 | MS.gene75529:CDS |
GCAGTAGTCTTCACTGAATC+TGG | 0.404532 | 3.3:-72194171 | None:intergenic |
TTGCTGCTTCTGATCCTGAT+TGG | 0.416301 | 3.3:+72188318 | MS.gene75529:CDS |
TCGCTGTCTGTCTCATACTC+AGG | 0.418770 | 3.3:-72188643 | None:intergenic |
TCCTTCCTTCTGGCACTTGA+AGG | 0.419682 | 3.3:-72194227 | None:intergenic |
CCTCCCCAACTTTATTCATC+AGG | 0.419766 | 3.3:-72188887 | None:intergenic |
CTATTTGTGATCTGAGTTCA+CGG | 0.419778 | 3.3:-72189911 | None:intergenic |
AATAAAGTTGGGGAGGTAGA+AGG | 0.421366 | 3.3:+72188894 | MS.gene75529:CDS |
TGAATTTCTCAACTCGAAGA+AGG | 0.425487 | 3.3:-72189176 | None:intergenic |
CTACTTTGCCCGCAGATGGC+TGG | 0.429531 | 3.3:+72194054 | MS.gene75529:intron |
CTTACCTGATGAATAAAGTT+GGG | 0.433506 | 3.3:+72188883 | MS.gene75529:CDS |
CGCATGGCTTGCAAGAAGGT+TGG | 0.436683 | 3.3:+72193894 | MS.gene75529:CDS |
ATTGCAAAGGGAGCACTAGC+AGG | 0.440136 | 3.3:-72192976 | None:intergenic |
GAGGCATACTTCAGAAGTAT+TGG | 0.441074 | 3.3:+72193643 | MS.gene75529:CDS |
CATTGTTCTCATTACATCTC+AGG | 0.442576 | 3.3:+72193008 | MS.gene75529:CDS |
GCCACGAGAGTGATATTTCC+CGG | 0.447718 | 3.3:+72191513 | MS.gene75529:CDS |
CGCTGTCTGTCTCATACTCA+GGG | 0.448994 | 3.3:-72188642 | None:intergenic |
GGAAATATCACTCTCGTGGC+GGG | 0.451213 | 3.3:-72191510 | None:intergenic |
TGTAGGGGAGCTATGAAATT+GGG | 0.453562 | 3.3:+72188275 | None:intergenic |
AGCTATGAAATTGGGTCGAC+TGG | 0.455057 | 3.3:+72188283 | None:intergenic |
CCAACTTTATTCATCAGGTA+AGG | 0.459982 | 3.3:-72188882 | None:intergenic |
GCATGGCTTGCAAGAAGGTT+GGG | 0.460900 | 3.3:+72193895 | MS.gene75529:CDS |
ACAGCTGTATATTGATTAGC+TGG | 0.468190 | 3.3:-72193947 | None:intergenic |
AAAACCCATACCGGATTCCT+TGG | 0.468656 | 3.3:-72190523 | None:intergenic |
AAGGTTGGGCGTGGCTTGCA+AGG | 0.480309 | 3.3:+72193909 | MS.gene75529:CDS |
CCTTACCTGATGAATAAAGT+TGG | 0.481739 | 3.3:+72188882 | MS.gene75529:CDS |
ATCTCAACACTGAATGATTG+AGG | 0.492927 | 3.3:-72192272 | None:intergenic |
TCGAGAAGACAATGGAAAGT+TGG | 0.493098 | 3.3:+72193669 | MS.gene75529:CDS |
AAAGCAAATAAGGGGCATAA+GGG | 0.501139 | 3.3:+72191541 | MS.gene75529:CDS |
TGAATGATTGAGGGCATTGA+CGG | 0.503300 | 3.3:-72192262 | None:intergenic |
GGAAGTAAAACAAGCTGCAT+TGG | 0.503573 | 3.3:+72190347 | MS.gene75529:CDS |
AATACTGACACCAAGGAATC+CGG | 0.505188 | 3.3:+72190513 | MS.gene75529:CDS |
GCAAAATATCCATTACATAT+GGG | 0.508499 | 3.3:-72193189 | None:intergenic |
TTCATCAAACTACTTCATCA+AGG | 0.511278 | 3.3:+72188420 | MS.gene75529:CDS |
TATGAAGGTGTACGGTGCAC+TGG | 0.512093 | 3.3:+72193729 | MS.gene75529:CDS |
AGCCAAAACAAAGGCAGCAA+TGG | 0.513768 | 3.3:+72190395 | MS.gene75529:CDS |
GTCTATCTTTCAATCAAAAG+AGG | 0.513894 | 3.3:+72193624 | MS.gene75529:intron |
GGTGCTTTGGGACGGTGTAA+AGG | 0.520108 | 3.3:-72193234 | None:intergenic |
TAGAAATAAGATCTCAGCGT+TGG | 0.520586 | 3.3:+72189113 | MS.gene75529:CDS |
TCAGATCACAAATAGAAGAA+AGG | 0.525142 | 3.3:+72189919 | MS.gene75529:CDS |
AGAGCATCGAAACTCCAATC+AGG | 0.527876 | 3.3:-72188332 | None:intergenic |
AGTGGGAAAGAAATTGAGAA+AGG | 0.533181 | 3.3:+72188598 | MS.gene75529:CDS |
AATCCGCATGGCTTGCAAGA+AGG | 0.533446 | 3.3:+72193890 | MS.gene75529:CDS |
CTTCAAATATAGAGCATGGT+AGG | 0.534137 | 3.3:+72191157 | MS.gene75529:CDS |
TTACACCGTCCCAAAGCACC+TGG | 0.537516 | 3.3:+72193237 | MS.gene75529:CDS |
GAATTTCTCAACTCGAAGAA+GGG | 0.543891 | 3.3:-72189175 | None:intergenic |
AAAGGCTAAAGCTGAAGCAG+AGG | 0.545258 | 3.3:+72190016 | MS.gene75529:CDS |
ATGACATTGGCAATTGCAAA+GGG | 0.545913 | 3.3:-72192988 | None:intergenic |
TTAGGGTTAACTTATTCAGT+GGG | 0.546979 | 3.3:+72188581 | MS.gene75529:intron |
AGCACTAGCAGGGCTTGCAC+AGG | 0.547376 | 3.3:-72192965 | None:intergenic |
TCTCAACACTGAATGATTGA+GGG | 0.548370 | 3.3:-72192271 | None:intergenic |
GTATGAAGAGGCCAAGAGAA+AGG | 0.551262 | 3.3:+72189962 | MS.gene75529:CDS |
GTGATAACGTATTTGACTGC+AGG | 0.554583 | 3.3:-72194251 | None:intergenic |
TTTAGGGTTAACTTATTCAG+TGG | 0.560055 | 3.3:+72188580 | MS.gene75529:intron |
GTTTGATGAAAATGCAAAGG+TGG | 0.561720 | 3.3:-72188407 | None:intergenic |
AGGTGGAGTGGAAGAATTAG+CGG | 0.565983 | 3.3:-72188390 | None:intergenic |
GCGGCTAGAATCATATATGA+AGG | 0.567325 | 3.3:+72193714 | MS.gene75529:CDS |
GCTTGCAAGAAGGTTGGGCG+TGG | 0.571452 | 3.3:+72193900 | MS.gene75529:CDS |
GAAATTCAAAGAAACAAGGC+AGG | 0.576260 | 3.3:+72189191 | MS.gene75529:CDS |
GTAAACCAGGTGCTTTGGGA+CGG | 0.576994 | 3.3:-72193242 | None:intergenic |
TCCTTCAAGTGCCAGAAGGA+AGG | 0.577361 | 3.3:+72194226 | MS.gene75529:CDS |
TGACAAAGCGTTAGTAGTAT+CGG | 0.578183 | 3.3:+72188675 | MS.gene75529:CDS |
ATGAAAATGCAAAGGTGGAG+TGG | 0.582161 | 3.3:-72188402 | None:intergenic |
ACGACAGGTCCCATATGTAA+TGG | 0.582923 | 3.3:+72193180 | MS.gene75529:intron |
GAATCATATATGAAGGTGTA+CGG | 0.586014 | 3.3:+72193721 | MS.gene75529:CDS |
AATGACATTGGCAATTGCAA+AGG | 0.588611 | 3.3:-72192989 | None:intergenic |
AATGCTTCAAATATAGAGCA+TGG | 0.591376 | 3.3:+72191153 | MS.gene75529:CDS |
GAAGACTACTGCGTACATGC+AGG | 0.593376 | 3.3:+72194182 | MS.gene75529:CDS |
AAGTGATGCAGCGTATGAAG+AGG | 0.595948 | 3.3:+72189950 | MS.gene75529:CDS |
ATTCTCCAAAGCATTGAGCT+CGG | 0.597981 | 3.3:-72188360 | None:intergenic |
TAGAACTTGATCTTACAACT+TGG | 0.600852 | 3.3:-72191212 | None:intergenic |
TGTAATGAGAACAATGACAT+TGG | 0.604848 | 3.3:-72193001 | None:intergenic |
TTGCAAAGGGAGCACTAGCA+GGG | 0.607083 | 3.3:-72192975 | None:intergenic |
AGTATTTAATAGGCTTGATG+CGG | 0.608274 | 3.3:-72190496 | None:intergenic |
CCTGATGAATAAAGTTGGGG+AGG | 0.613663 | 3.3:+72188887 | MS.gene75529:CDS |
GTACAGAAGATTATTTAAAG+CGG | 0.615401 | 3.3:+72193695 | MS.gene75529:CDS |
CAGTTCCTTCAAGTGCCAGA+AGG | 0.616857 | 3.3:+72194222 | MS.gene75529:CDS |
CCGAACATTCAAAATCCGCA+TGG | 0.620982 | 3.3:+72193878 | MS.gene75529:CDS |
GAGAAAGGTTGCTTTGCAGG+AGG | 0.625015 | 3.3:+72189977 | MS.gene75529:CDS |
ATTGGTTATCGAGAAGACAA+TGG | 0.628835 | 3.3:+72193661 | MS.gene75529:CDS |
TTACCTGATGAATAAAGTTG+GGG | 0.630676 | 3.3:+72188884 | MS.gene75529:CDS |
CTGTCTCATACTCAGGGGCA+CGG | 0.632727 | 3.3:-72188636 | None:intergenic |
CGGAATATAAAGCAAATAAG+GGG | 0.635811 | 3.3:+72191533 | MS.gene75529:CDS |
GCAGGCCAAACTTAAAGCCG+AGG | 0.640019 | 3.3:+72190326 | MS.gene75529:intron |
GGGAAATATCACTCTCGTGG+CGG | 0.640943 | 3.3:-72191511 | None:intergenic |
CCTATTAAATACTGACACCA+AGG | 0.642682 | 3.3:+72190506 | MS.gene75529:CDS |
TCCGGGAAATATCACTCTCG+TGG | 0.645571 | 3.3:-72191514 | None:intergenic |
CAACCTTCTTGCAAGCCATG+CGG | 0.652087 | 3.3:-72193893 | None:intergenic |
AACACACGATCATCAACTGA+GGG | 0.653093 | 3.3:+72188932 | MS.gene75529:CDS |
CTTGTGATGAAATTTATCTG+AGG | 0.654595 | 3.3:+72188716 | MS.gene75529:CDS |
GCGTTAGTAGTATCGGACAC+TGG | 0.656621 | 3.3:+72188682 | MS.gene75529:CDS |
GTAGTTTGATGAAAATGCAA+AGG | 0.657587 | 3.3:-72188410 | None:intergenic |
TGTAAGATCAAGTTCTACAC+AGG | 0.659828 | 3.3:+72191218 | MS.gene75529:CDS |
TTGAGAAATTCAAAGAAACA+AGG | 0.661129 | 3.3:+72189187 | MS.gene75529:CDS |
AGTAATGGAAGCCAAAACAA+AGG | 0.684556 | 3.3:+72190386 | MS.gene75529:CDS |
TTCCAAAGCAGAGTCAACAT+CGG | 0.691363 | 3.3:-72188853 | None:intergenic |
TAACACACGATCATCAACTG+AGG | 0.709226 | 3.3:+72188931 | MS.gene75529:CDS |
TGAGTATGAGACAGACAGCG+AGG | 0.732630 | 3.3:+72188645 | MS.gene75529:CDS |
GCTGTCTGTCTCATACTCAG+GGG | 0.738330 | 3.3:-72188641 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAATAATGAATTGATA+AGG | - | chr3.3:72188462-72188481 | None:intergenic | 10.0% |
!! | GAAAAATTAGTATATTTATA+GGG | + | chr3.3:72192092-72192111 | MS.gene75529:intron | 10.0% |
!! | TGAAAAATTAGTATATTTAT+AGG | + | chr3.3:72192091-72192110 | MS.gene75529:intron | 10.0% |
!!! | AATATGAATTTTTATATGTT+TGG | + | chr3.3:72191896-72191915 | MS.gene75529:intron | 10.0% |
!!! | AATTTTTTTTCCAATTTTTT+TGG | + | chr3.3:72191965-72191984 | MS.gene75529:intron | 10.0% |
!!! | TAATATTTTGTAATTTTCTT+TGG | + | chr3.3:72188808-72188827 | MS.gene75529:intron | 10.0% |
!!! | TTTTGTTATTATCTTATTTA+AGG | - | chr3.3:72192168-72192187 | None:intergenic | 10.0% |
!!! | TTTTTTTTTATTAGAAGAAT+GGG | - | chr3.3:72192531-72192550 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTATTAGAAGAA+TGG | - | chr3.3:72192532-72192551 | None:intergenic | 10.0% |
!! | AAATAAATATTGATGAAACA+AGG | - | chr3.3:72190750-72190769 | None:intergenic | 15.0% |
!! | AACAATCAAACTAAAATAAA+AGG | - | chr3.3:72190050-72190069 | None:intergenic | 15.0% |
!! | ACAATCAAACTAAAATAAAA+GGG | - | chr3.3:72190049-72190068 | None:intergenic | 15.0% |
!! | TACATATGATATTACTTAAA+AGG | - | chr3.3:72191779-72191798 | None:intergenic | 15.0% |
!! | TGTTGAGATATTAATTAAAA+AGG | + | chr3.3:72192286-72192305 | MS.gene75529:CDS | 15.0% |
!! | TTGGTGTATTTATTAATATA+CGG | + | chr3.3:72194010-72194029 | MS.gene75529:intron | 15.0% |
!!! | ATTTTAGTTTGATTGTTATT+TGG | + | chr3.3:72190053-72190072 | MS.gene75529:intron | 15.0% |
!!! | TTAATTGTAGATGTTATTTT+TGG | + | chr3.3:72192423-72192442 | MS.gene75529:intron | 15.0% |
!!! | TTCACGATATTTAAATTTTA+CGG | + | chr3.3:72190302-72190321 | MS.gene75529:intron | 15.0% |
!! | AAAAGTCGAAGAAAAAATTT+AGG | - | chr3.3:72191718-72191737 | None:intergenic | 20.0% |
!! | AAAATCTCTTCCAAAAAAAT+TGG | - | chr3.3:72191978-72191997 | None:intergenic | 20.0% |
!! | AAAGTCGAAGAAAAAATTTA+GGG | - | chr3.3:72191717-72191736 | None:intergenic | 20.0% |
!! | AAATTCACTTGTATGAATAT+TGG | + | chr3.3:72189658-72189677 | MS.gene75529:intron | 20.0% |
!! | AATATTCTACACATTTCATA+GGG | + | chr3.3:72192001-72192020 | MS.gene75529:intron | 20.0% |
!! | AATTCACTTGTATGAATATT+GGG | + | chr3.3:72189659-72189678 | MS.gene75529:intron | 20.0% |
!! | ACAATAACTAATCTTAAAAC+TGG | + | chr3.3:72192391-72192410 | MS.gene75529:intron | 20.0% |
!! | AGAAAGATATTATATGTCAA+TGG | - | chr3.3:72192334-72192353 | None:intergenic | 20.0% |
!! | ATAAATAAGTTGTAGAATGA+AGG | - | chr3.3:72189304-72189323 | None:intergenic | 20.0% |
!! | ATATATATACAGAGAAACAA+AGG | - | chr3.3:72190697-72190716 | None:intergenic | 20.0% |
!! | ATATGATATTACTTAAAAGG+AGG | - | chr3.3:72191776-72191795 | None:intergenic | 20.0% |
!! | ATATTATATGTCAATGGAAT+CGG | - | chr3.3:72192328-72192347 | None:intergenic | 20.0% |
!! | ATTTAAATATCGTGAATGAA+TGG | - | chr3.3:72190298-72190317 | None:intergenic | 20.0% |
!! | ATTTAATAGTTAGTCATTCT+TGG | + | chr3.3:72189002-72189021 | MS.gene75529:intron | 20.0% |
!! | CAAAAGCAAATAAATAATCT+TGG | - | chr3.3:72193138-72193157 | None:intergenic | 20.0% |
!! | CAATAACTAATCTTAAAACT+GGG | + | chr3.3:72192392-72192411 | MS.gene75529:intron | 20.0% |
!! | CTGTATATATATTAGTATAC+TGG | + | chr3.3:72190705-72190724 | MS.gene75529:intron | 20.0% |
!! | GTTTAAATTTATGGAATGTT+TGG | + | chr3.3:72192669-72192688 | MS.gene75529:intron | 20.0% |
!! | TATGATATTACTTAAAAGGA+GGG | - | chr3.3:72191775-72191794 | None:intergenic | 20.0% |
!! | TCTTGAAAAGAAAAGATAAA+GGG | - | chr3.3:72189271-72189290 | None:intergenic | 20.0% |
!! | TTCCATAAATTTAAACCATT+AGG | - | chr3.3:72192665-72192684 | None:intergenic | 20.0% |
!! | TTTATTAGAGGTTCAAATAA+TGG | + | chr3.3:72189397-72189416 | MS.gene75529:intron | 20.0% |
!!! | AAAAGTATTTTAGCAAGAAT+AGG | + | chr3.3:72192548-72192567 | MS.gene75529:intron | 20.0% |
!!! | AAGTTGAAGAAAAATTTTAG+AGG | + | chr3.3:72192060-72192079 | MS.gene75529:intron | 20.0% |
!!! | ACAAAAAAAAGTGTATGAAA+CGG | - | chr3.3:72190866-72190885 | None:intergenic | 20.0% |
!!! | AGTTGAAGAAAAATTTTAGA+GGG | + | chr3.3:72192061-72192080 | MS.gene75529:intron | 20.0% |
!!! | ATGAATTTTTATATGTTTGG+TGG | + | chr3.3:72191899-72191918 | MS.gene75529:intron | 20.0% |
!!! | CAAGATTATTTATTTGCTTT+TGG | + | chr3.3:72193136-72193155 | MS.gene75529:intron | 20.0% |
!!! | GAAAAGTTGGTATATTTATA+GGG | - | chr3.3:72191686-72191705 | None:intergenic | 20.0% |
!!! | TAAATTTTTTCTTCGACTTT+TGG | + | chr3.3:72191717-72191736 | MS.gene75529:intron | 20.0% |
!!! | TAATATCTTTCTGCTTTATT+TGG | + | chr3.3:72192342-72192361 | MS.gene75529:intron | 20.0% |
!!! | TATCATCGAAAAAAAGTTTT+AGG | - | chr3.3:72190181-72190200 | None:intergenic | 20.0% |
!!! | TGAACTTTGTTGATTTTTTA+GGG | + | chr3.3:72188564-72188583 | MS.gene75529:intron | 20.0% |
!!! | TGGTGATTGAAAATTTTATA+GGG | + | chr3.3:72192032-72192051 | MS.gene75529:intron | 20.0% |
!!! | TTGAACTTTGTTGATTTTTT+AGG | + | chr3.3:72188563-72188582 | MS.gene75529:intron | 20.0% |
!!! | TTGATAAAGGGAATTTTTTA+GGG | + | chr3.3:72191643-72191662 | MS.gene75529:intron | 20.0% |
!!! | TTTCCTTTTGAGATATATAT+GGG | + | chr3.3:72190892-72190911 | MS.gene75529:intron | 20.0% |
!!! | TTTGATAAAGGGAATTTTTT+AGG | + | chr3.3:72191642-72191661 | MS.gene75529:intron | 20.0% |
!!! | TTTTCCTTTTGAGATATATA+TGG | + | chr3.3:72190891-72190910 | MS.gene75529:intron | 20.0% |
! | AAGTGAAGATGAAAAACTTT+CGG | - | chr3.3:72191747-72191766 | None:intergenic | 25.0% |
! | AATGGTGAAAAATTGCTTAA+TGG | - | chr3.3:72189475-72189494 | None:intergenic | 25.0% |
! | AATTGGGTTACATATGTATT+TGG | - | chr3.3:72192119-72192138 | None:intergenic | 25.0% |
! | AGCAAAATATCCATTACATA+TGG | - | chr3.3:72193193-72193212 | None:intergenic | 25.0% |
! | AGTAAGAAATGCAAAATGTT+TGG | + | chr3.3:72193991-72194010 | MS.gene75529:intron | 25.0% |
! | CAATATTCTACACATTTCAT+AGG | + | chr3.3:72192000-72192019 | MS.gene75529:intron | 25.0% |
! | CACCTAATGGTTTAAATTTA+TGG | + | chr3.3:72192660-72192679 | MS.gene75529:intron | 25.0% |
! | CTTGAAAAGAAAAGATAAAG+GGG | - | chr3.3:72189270-72189289 | None:intergenic | 25.0% |
! | GCAAAATATCCATTACATAT+GGG | - | chr3.3:72193192-72193211 | None:intergenic | 25.0% |
! | GTACAGAAGATTATTTAAAG+CGG | + | chr3.3:72193695-72193714 | MS.gene75529:CDS | 25.0% |
! | GTCTTGAAAAGAAAAGATAA+AGG | - | chr3.3:72189272-72189291 | None:intergenic | 25.0% |
! | TAAGCTTCTATAAAGAAGAT+TGG | - | chr3.3:72190264-72190283 | None:intergenic | 25.0% |
! | TAAGGATTGAAATTTCCTAT+AGG | - | chr3.3:72192150-72192169 | None:intergenic | 25.0% |
! | TATACATGTACAGAAATGTT+TGG | + | chr3.3:72190085-72190104 | MS.gene75529:intron | 25.0% |
! | TCAAAATCAGAGAATTTGAT+GGG | - | chr3.3:72191448-72191467 | None:intergenic | 25.0% |
! | TCATATTCATAAACTTAACG+CGG | - | chr3.3:72188520-72188539 | None:intergenic | 25.0% |
! | TGATCTAAAAGTGAAAACAT+TGG | - | chr3.3:72190576-72190595 | None:intergenic | 25.0% |
! | TTCCCTTTATCAAAATGTAT+AGG | - | chr3.3:72191636-72191655 | None:intergenic | 25.0% |
! | TTGAGAAATTCAAAGAAACA+AGG | + | chr3.3:72189187-72189206 | MS.gene75529:CDS | 25.0% |
!! | AAATATGATTTGATAACCGT+GGG | + | chr3.3:72193557-72193576 | MS.gene75529:intron | 25.0% |
!! | AAATTTTCAATCACCACTTT+TGG | - | chr3.3:72192028-72192047 | None:intergenic | 25.0% |
!! | ATATTTAAATTTTACGGTGC+AGG | + | chr3.3:72190308-72190327 | MS.gene75529:intron | 25.0% |
!! | ATTGATAAGGTTTTTGAATG+TGG | - | chr3.3:72188449-72188468 | None:intergenic | 25.0% |
!! | GTGGTGATTGAAAATTTTAT+AGG | + | chr3.3:72192031-72192050 | MS.gene75529:intron | 25.0% |
!! | TATTTCACAAGAAATTTGCT+TGG | + | chr3.3:72191393-72191412 | MS.gene75529:intron | 25.0% |
!! | TTCTAATCTTTTCAATTCAC+AGG | + | chr3.3:72189083-72189102 | MS.gene75529:intron | 25.0% |
!! | TTGATAAGGTTTTTGAATGT+GGG | - | chr3.3:72188448-72188467 | None:intergenic | 25.0% |
!!! | AAGATTTTGACAAATTCACA+CGG | + | chr3.3:72193772-72193791 | MS.gene75529:intron | 25.0% |
!!! | AATTACGAGTTTTAAGACAA+AGG | - | chr3.3:72191269-72191288 | None:intergenic | 25.0% |
!!! | AATTCTCTGATTTTGACATT+TGG | + | chr3.3:72191452-72191471 | MS.gene75529:intron | 25.0% |
!!! | ATATGTAATGGATATTTTGC+TGG | + | chr3.3:72193192-72193211 | MS.gene75529:CDS | 25.0% |
!!! | CGAAAAGTTGGTATATTTAT+AGG | - | chr3.3:72191687-72191706 | None:intergenic | 25.0% |
!!! | GACCTATACATTTTGATAAA+GGG | + | chr3.3:72191631-72191650 | MS.gene75529:intron | 25.0% |
!!! | GCAGTTTTTTTTTTTTGTTG+AGG | + | chr3.3:72193338-72193357 | MS.gene75529:intron | 25.0% |
!!! | TGACCTATACATTTTGATAA+AGG | + | chr3.3:72191630-72191649 | MS.gene75529:intron | 25.0% |
!!! | TGCAATGTTTTAAAAACTTG+TGG | + | chr3.3:72192770-72192789 | MS.gene75529:intron | 25.0% |
!!! | TTTAGGGTCAAATATGTTTT+TGG | + | chr3.3:72191659-72191678 | MS.gene75529:intron | 25.0% |
AAAATCAGAGAATTTGATGG+GGG | - | chr3.3:72191446-72191465 | None:intergenic | 30.0% | |
AACCTCTAATAAAGCACATT+GGG | - | chr3.3:72189390-72189409 | None:intergenic | 30.0% | |
AAGAAATTGAGAAAGGTAGA+AGG | + | chr3.3:72188605-72188624 | MS.gene75529:CDS | 30.0% | |
AAGCAAAACCAACAGATAAT+TGG | - | chr3.3:72191318-72191337 | None:intergenic | 30.0% | |
AAGCAATACCAATTATCTGT+TGG | + | chr3.3:72191307-72191326 | MS.gene75529:intron | 30.0% | |
AATGCTTCAAATATAGAGCA+TGG | + | chr3.3:72191153-72191172 | MS.gene75529:CDS | 30.0% | |
ACAAAGGATTTCCAACTAAA+TGG | - | chr3.3:72190681-72190700 | None:intergenic | 30.0% | |
AGTATTTAATAGGCTTGATG+CGG | - | chr3.3:72190499-72190518 | None:intergenic | 30.0% | |
AGTGAAGATGAAAAACTTTC+GGG | - | chr3.3:72191746-72191765 | None:intergenic | 30.0% | |
ATAACTTCAGTTCCTTAGAA+TGG | + | chr3.3:72192487-72192506 | MS.gene75529:intron | 30.0% | |
ATATTGATGAAACAAGGAAG+AGG | - | chr3.3:72190744-72190763 | None:intergenic | 30.0% | |
ATCAGTTAACTGTATATGGA+AGG | + | chr3.3:72192446-72192465 | MS.gene75529:intron | 30.0% | |
ATCTGTTTATACTTCATAGG+AGG | + | chr3.3:72189569-72189588 | MS.gene75529:intron | 30.0% | |
ATTAGGTGAAGATACATGAA+TGG | - | chr3.3:72192648-72192667 | None:intergenic | 30.0% | |
ATTCATGTATCTTCACCTAA+TGG | + | chr3.3:72192647-72192666 | MS.gene75529:intron | 30.0% | |
CAAAATCAGAGAATTTGATG+GGG | - | chr3.3:72191447-72191466 | None:intergenic | 30.0% | |
CAAGTCAAATTGGTATCAAT+AGG | - | chr3.3:72188972-72188991 | None:intergenic | 30.0% | |
CATTAACAAGATCCATATAG+TGG | - | chr3.3:72190216-72190235 | None:intergenic | 30.0% | |
CCGGAATATAAAGCAAATAA+GGG | + | chr3.3:72191532-72191551 | MS.gene75529:CDS | 30.0% | |
CCTATAGGACATCAAAAATT+GGG | - | chr3.3:72192135-72192154 | None:intergenic | 30.0% | |
CGGAATATAAAGCAAATAAG+GGG | + | chr3.3:72191533-72191552 | MS.gene75529:CDS | 30.0% | |
CTATGGTTGTTAATAAATGC+AGG | + | chr3.3:72192898-72192917 | MS.gene75529:intron | 30.0% | |
CTGATCTGTTTATACTTCAT+AGG | + | chr3.3:72189566-72189585 | MS.gene75529:intron | 30.0% | |
CTTACCTGATGAATAAAGTT+GGG | + | chr3.3:72188883-72188902 | MS.gene75529:CDS | 30.0% | |
CTTCACTAAATATTGCCTAA+AGG | + | chr3.3:72189535-72189554 | MS.gene75529:intron | 30.0% | |
CTTGTGATGAAATTTATCTG+AGG | + | chr3.3:72188716-72188735 | MS.gene75529:CDS | 30.0% | |
GAAATACGAGAATAAAGCTA+TGG | - | chr3.3:72188757-72188776 | None:intergenic | 30.0% | |
GATCCCATATATATCTCAAA+AGG | - | chr3.3:72190898-72190917 | None:intergenic | 30.0% | |
GGAAAAAAACAGAGCATAAA+AGG | + | chr3.3:72192367-72192386 | MS.gene75529:intron | 30.0% | |
GTAGTTTGATGAAAATGCAA+AGG | - | chr3.3:72188413-72188432 | None:intergenic | 30.0% | |
GTCAAAATCAGAGAATTTGA+TGG | - | chr3.3:72191449-72191468 | None:intergenic | 30.0% | |
GTCAAATATTAGTTATCAGC+AGG | - | chr3.3:72189719-72189738 | None:intergenic | 30.0% | |
GTCTATCTTTCAATCAAAAG+AGG | + | chr3.3:72193624-72193643 | MS.gene75529:intron | 30.0% | |
TAAAGGGAAAAAACTGACAT+TGG | - | chr3.3:72190606-72190625 | None:intergenic | 30.0% | |
TAAATGGTAGTAAGAGAATC+AGG | - | chr3.3:72190665-72190684 | None:intergenic | 30.0% | |
TACCGTTGAAAACAGATATT+GGG | + | chr3.3:72191241-72191260 | MS.gene75529:intron | 30.0% | |
TAGAACTTGATCTTACAACT+TGG | - | chr3.3:72191215-72191234 | None:intergenic | 30.0% | |
TCAGATCACAAATAGAAGAA+AGG | + | chr3.3:72189919-72189938 | MS.gene75529:CDS | 30.0% | |
TCCTATAGGACATCAAAAAT+TGG | - | chr3.3:72192136-72192155 | None:intergenic | 30.0% | |
TCTAAGGAACTGAAGTTATT+AGG | - | chr3.3:72192486-72192505 | None:intergenic | 30.0% | |
TGAAAAAAGAAAACCCATAC+CGG | - | chr3.3:72190535-72190554 | None:intergenic | 30.0% | |
TGTAATGAGAACAATGACAT+TGG | - | chr3.3:72193004-72193023 | None:intergenic | 30.0% | |
TTACCTGATGAATAAAGTTG+GGG | + | chr3.3:72188884-72188903 | MS.gene75529:CDS | 30.0% | |
TTAGGGTTAACTTATTCAGT+GGG | + | chr3.3:72188581-72188600 | MS.gene75529:intron | 30.0% | |
TTCATCAAACTACTTCATCA+AGG | + | chr3.3:72188420-72188439 | MS.gene75529:CDS | 30.0% | |
TTCTCTTACTACCATTTAGT+TGG | + | chr3.3:72190667-72190686 | MS.gene75529:intron | 30.0% | |
TTGGATCAGTTAACTGTATA+TGG | + | chr3.3:72192442-72192461 | MS.gene75529:intron | 30.0% | |
TTGTAACTGACAAGTCAAAT+TGG | - | chr3.3:72188982-72189001 | None:intergenic | 30.0% | |
! | AAATGTATGGGTTGCAATTT+AGG | - | chr3.3:72190116-72190135 | None:intergenic | 30.0% |
! | AACATCTGAAACCAATTTCA+TGG | - | chr3.3:72192841-72192860 | None:intergenic | 30.0% |
! | AAGTTACCTTTTTGTAAACC+AGG | - | chr3.3:72193258-72193277 | None:intergenic | 30.0% |
! | AAGTTGAATCAAAAGTGTAG+GGG | + | chr3.3:72190952-72190971 | MS.gene75529:intron | 30.0% |
! | AATATGATTTGATAACCGTG+GGG | + | chr3.3:72193558-72193577 | MS.gene75529:intron | 30.0% |
! | AATCTTTTCAATTCACAGGA+TGG | + | chr3.3:72189087-72189106 | MS.gene75529:intron | 30.0% |
! | CAAATATGATTTGATAACCG+TGG | + | chr3.3:72193556-72193575 | MS.gene75529:intron | 30.0% |
! | CCACATTTTGCCTAAATAAA+AGG | + | chr3.3:72193418-72193437 | MS.gene75529:intron | 30.0% |
! | CCCTTATTTGCTTTATATTC+CGG | - | chr3.3:72191535-72191554 | None:intergenic | 30.0% |
! | CCTTATTTGCTTTATATTCC+GGG | - | chr3.3:72191534-72191553 | None:intergenic | 30.0% |
! | GAAGTTGAATCAAAAGTGTA+GGG | + | chr3.3:72190951-72190970 | MS.gene75529:intron | 30.0% |
! | GAATCATATATGAAGGTGTA+CGG | + | chr3.3:72193721-72193740 | MS.gene75529:CDS | 30.0% |
! | GCATGACTATTTACTCTTTT+GGG | + | chr3.3:72192193-72192212 | MS.gene75529:intron | 30.0% |
! | GGGAATGTAGACAATTTTAT+AGG | - | chr3.3:72189370-72189389 | None:intergenic | 30.0% |
! | TACCCAATATCTGTTTTCAA+CGG | - | chr3.3:72191246-72191265 | None:intergenic | 30.0% |
! | TCTTTTGACCCAGATAAAAT+GGG | - | chr3.3:72193450-72193469 | None:intergenic | 30.0% |
! | TGAAGTTGAATCAAAAGTGT+AGG | + | chr3.3:72190950-72190969 | MS.gene75529:intron | 30.0% |
! | TGCATGACTATTTACTCTTT+TGG | + | chr3.3:72192192-72192211 | MS.gene75529:intron | 30.0% |
! | TTCTTTTGACCCAGATAAAA+TGG | - | chr3.3:72193451-72193470 | None:intergenic | 30.0% |
! | TTTAGGGTTAACTTATTCAG+TGG | + | chr3.3:72188580-72188599 | MS.gene75529:intron | 30.0% |
!! | AAGCATTGACTATGAATTAC+AGG | + | chr3.3:72189342-72189361 | MS.gene75529:intron | 30.0% |
!! | ATCTTTCTGCTTTATTTGGA+AGG | + | chr3.3:72192346-72192365 | MS.gene75529:intron | 30.0% |
!! | CCTTTTATTTAGGCAAAATG+TGG | - | chr3.3:72193421-72193440 | None:intergenic | 30.0% |
!!! | AGTATTTTAGCAAGAATAGG+TGG | + | chr3.3:72192551-72192570 | MS.gene75529:intron | 30.0% |
!!! | CTAACAAGAGAAAGTGTTTT+GGG | - | chr3.3:72189781-72189800 | None:intergenic | 30.0% |
!!! | GTATTTTAGCAAGAATAGGT+GGG | + | chr3.3:72192552-72192571 | MS.gene75529:intron | 30.0% |
!!! | TCTAACAAGAGAAAGTGTTT+TGG | - | chr3.3:72189782-72189801 | None:intergenic | 30.0% |
AAAAAAACTGCTCCTTAGCT+AGG | - | chr3.3:72193329-72193348 | None:intergenic | 35.0% | |
AAAAGAAAAGATAAAGGGGC+AGG | - | chr3.3:72189266-72189285 | None:intergenic | 35.0% | |
AAAGCTATGGTTCACGAAAT+AGG | - | chr3.3:72188744-72188763 | None:intergenic | 35.0% | |
AACTGCTCTACACAATCTTT+AGG | + | chr3.3:72191108-72191127 | MS.gene75529:intron | 35.0% | |
AATGACATTGGCAATTGCAA+AGG | - | chr3.3:72192992-72193011 | None:intergenic | 35.0% | |
AGATCAGTCATGTATCCTTT+AGG | - | chr3.3:72189553-72189572 | None:intergenic | 35.0% | |
AGCTGAGAAAAAAGCAGTAA+TGG | + | chr3.3:72190371-72190390 | MS.gene75529:CDS | 35.0% | |
AGGATCCAAAAACCATTCTA+AGG | - | chr3.3:72192502-72192521 | None:intergenic | 35.0% | |
AGTGGGAAAGAAATTGAGAA+AGG | + | chr3.3:72188598-72188617 | MS.gene75529:CDS | 35.0% | |
ATACTTCATAGGAGGAAGAT+TGG | + | chr3.3:72189577-72189596 | MS.gene75529:intron | 35.0% | |
ATCGTGAATGAATGGTCATT+TGG | - | chr3.3:72190290-72190309 | None:intergenic | 35.0% | |
ATCTCAACACTGAATGATTG+AGG | - | chr3.3:72192275-72192294 | None:intergenic | 35.0% | |
ATGACATTGGCAATTGCAAA+GGG | - | chr3.3:72192991-72193010 | None:intergenic | 35.0% | |
ATTAGAAGAATGGGTCGTTA+AGG | - | chr3.3:72192522-72192541 | None:intergenic | 35.0% | |
ATTGGTTATCGAGAAGACAA+TGG | + | chr3.3:72193661-72193680 | MS.gene75529:CDS | 35.0% | |
CAAGTGACAACATACTTTAC+AGG | + | chr3.3:72192933-72192952 | MS.gene75529:intron | 35.0% | |
CAATATGATTGTGCTTCAAC+TGG | + | chr3.3:72193472-72193491 | MS.gene75529:intron | 35.0% | |
CAATGCAGCAGTAAATGTAT+GGG | - | chr3.3:72190128-72190147 | None:intergenic | 35.0% | |
CATTGTTCTCATTACATCTC+AGG | + | chr3.3:72193008-72193027 | MS.gene75529:CDS | 35.0% | |
CCAACTTTATTCATCAGGTA+AGG | - | chr3.3:72188885-72188904 | None:intergenic | 35.0% | |
CCCGGAATATAAAGCAAATA+AGG | + | chr3.3:72191531-72191550 | MS.gene75529:CDS | 35.0% | |
CCTATTAAATACTGACACCA+AGG | + | chr3.3:72190506-72190525 | MS.gene75529:CDS | 35.0% | |
CCTTACCTGATGAATAAAGT+TGG | + | chr3.3:72188882-72188901 | MS.gene75529:CDS | 35.0% | |
CTATTTGTGATCTGAGTTCA+CGG | - | chr3.3:72189914-72189933 | None:intergenic | 35.0% | |
CTTCAAATATAGAGCATGGT+AGG | + | chr3.3:72191157-72191176 | MS.gene75529:CDS | 35.0% | |
CTTCTGCACTACAAAAAGTT+GGG | - | chr3.3:72189857-72189876 | None:intergenic | 35.0% | |
GAAATTCAAAGAAACAAGGC+AGG | + | chr3.3:72189191-72189210 | MS.gene75529:CDS | 35.0% | |
GAACAAAAGCTAGCAAGAAA+TGG | + | chr3.3:72192869-72192888 | MS.gene75529:intron | 35.0% | |
GAACCTCTAATAAAGCACAT+TGG | - | chr3.3:72189391-72189410 | None:intergenic | 35.0% | |
GAATTTCTCAACTCGAAGAA+GGG | - | chr3.3:72189178-72189197 | None:intergenic | 35.0% | |
GACTTTACTAGAACTTGTGA+GGG | + | chr3.3:72193058-72193077 | MS.gene75529:intron | 35.0% | |
GCAAGAAATGGTAGAATCTA+TGG | + | chr3.3:72192881-72192900 | MS.gene75529:intron | 35.0% | |
GGAAAAACAACAGCAAGAAA+AGG | + | chr3.3:72189998-72190017 | MS.gene75529:CDS | 35.0% | |
GTACCGTTGAAAACAGATAT+TGG | + | chr3.3:72191240-72191259 | MS.gene75529:intron | 35.0% | |
GTGAAGATGAAAAACTTTCG+GGG | - | chr3.3:72191745-72191764 | None:intergenic | 35.0% | |
GTGACTGAAATCCATGAAAT+TGG | + | chr3.3:72192827-72192846 | MS.gene75529:intron | 35.0% | |
GTGGAGACTGAAGAAAATAT+AGG | - | chr3.3:72190824-72190843 | None:intergenic | 35.0% | |
GTTTGATGAAAATGCAAAGG+TGG | - | chr3.3:72188410-72188429 | None:intergenic | 35.0% | |
GTTTGGTCTATTCACTTTAC+CGG | + | chr3.3:72190148-72190167 | MS.gene75529:intron | 35.0% | |
TAACAAGATCCATATAGTGG+TGG | - | chr3.3:72190213-72190232 | None:intergenic | 35.0% | |
TAGAAATAAGATCTCAGCGT+TGG | + | chr3.3:72189113-72189132 | MS.gene75529:CDS | 35.0% | |
TAGGGACTAAAACGAAAAGT+TGG | - | chr3.3:72191699-72191718 | None:intergenic | 35.0% | |
TATTTGCAGAACATGTAAGC+AGG | - | chr3.3:72193542-72193561 | None:intergenic | 35.0% | |
TCGTGAATGAATGGTCATTT+GGG | - | chr3.3:72190289-72190308 | None:intergenic | 35.0% | |
TCTCAACACTGAATGATTGA+GGG | - | chr3.3:72192274-72192293 | None:intergenic | 35.0% | |
TGAAGATGAAAAACTTTCGG+GGG | - | chr3.3:72191744-72191763 | None:intergenic | 35.0% | |
TGAATTTCTCAACTCGAAGA+AGG | - | chr3.3:72189179-72189198 | None:intergenic | 35.0% | |
TGTAAGATCAAGTTCTACAC+AGG | + | chr3.3:72191218-72191237 | MS.gene75529:CDS | 35.0% | |
TTATGCGTCAACATATGTTC+AGG | + | chr3.3:72191481-72191500 | MS.gene75529:intron | 35.0% | |
TTTACATGTCCACCACTATA+TGG | + | chr3.3:72190201-72190220 | MS.gene75529:intron | 35.0% | |
TTTCACCATTTGTTTGAGTG+AGG | + | chr3.3:72189485-72189504 | MS.gene75529:intron | 35.0% | |
! | AAAGCAAATAAGGGGCATAA+GGG | + | chr3.3:72191541-72191560 | MS.gene75529:CDS | 35.0% |
! | AAAGCACCTGGTTTACAAAA+AGG | + | chr3.3:72193249-72193268 | MS.gene75529:CDS | 35.0% |
! | AACTTTTGTGCTTAACAACG+TGG | - | chr3.3:72190843-72190862 | None:intergenic | 35.0% |
! | ACAGCTGTATATTGATTAGC+TGG | - | chr3.3:72193950-72193969 | None:intergenic | 35.0% |
! | AGTAATGGAAGCCAAAACAA+AGG | + | chr3.3:72190386-72190405 | MS.gene75529:CDS | 35.0% |
! | ATGCACAGTAATTTCAAGTC+GGG | + | chr3.3:72189616-72189635 | MS.gene75529:intron | 35.0% |
! | ATTGCTTAATGGATCTCTAC+AGG | - | chr3.3:72189464-72189483 | None:intergenic | 35.0% |
! | ATTTTCGCGAGCAATAACTT+CGG | + | chr3.3:72190779-72190798 | MS.gene75529:intron | 35.0% |
! | CAGTTCCTTAGAATGGTTTT+TGG | + | chr3.3:72192494-72192513 | MS.gene75529:intron | 35.0% |
! | CCCAATTTTTGATGTCCTAT+AGG | + | chr3.3:72192132-72192151 | MS.gene75529:intron | 35.0% |
! | GATGCACAGTAATTTCAAGT+CGG | + | chr3.3:72189615-72189634 | MS.gene75529:intron | 35.0% |
! | TAAAGCAAATAAGGGGCATA+AGG | + | chr3.3:72191540-72191559 | MS.gene75529:CDS | 35.0% |
! | TGACAAAGCGTTAGTAGTAT+CGG | + | chr3.3:72188675-72188694 | MS.gene75529:CDS | 35.0% |
! | TTCCCAATGTGCTTTATTAG+AGG | + | chr3.3:72189385-72189404 | MS.gene75529:intron | 35.0% |
! | TTTTGTAAACCAGGTGCTTT+GGG | - | chr3.3:72193249-72193268 | None:intergenic | 35.0% |
! | TTTTTGTAAACCAGGTGCTT+TGG | - | chr3.3:72193250-72193269 | None:intergenic | 35.0% |
!! | CCTTGGTGTCAGTATTTAAT+AGG | - | chr3.3:72190509-72190528 | None:intergenic | 35.0% |
!! | CGGTTATTTTCACAAACAGT+TGG | - | chr3.3:72188500-72188519 | None:intergenic | 35.0% |
!! | GATACTGATACTGTTGATTC+TGG | + | chr3.3:72193580-72193599 | MS.gene75529:intron | 35.0% |
!! | GGAAGTTACTCTTTAAAGTG+AGG | - | chr3.3:72191425-72191444 | None:intergenic | 35.0% |
!! | TGGGCTCAAACCTTTTATTT+AGG | - | chr3.3:72193431-72193450 | None:intergenic | 35.0% |
!! | TGTTTTGGGTGATATAAGAG+CGG | - | chr3.3:72189767-72189786 | None:intergenic | 35.0% |
!!! | TGCTAGCTTTTGTTCATCAT+TGG | - | chr3.3:72192864-72192883 | None:intergenic | 35.0% |
AACACACGATCATCAACTGA+GGG | + | chr3.3:72188932-72188951 | MS.gene75529:CDS | 40.0% | |
AATAAAGTTGGGGAGGTAGA+AGG | + | chr3.3:72188894-72188913 | MS.gene75529:CDS | 40.0% | |
AATACTGACACCAAGGAATC+CGG | + | chr3.3:72190513-72190532 | MS.gene75529:CDS | 40.0% | |
ATGAAAATGCAAAGGTGGAG+TGG | - | chr3.3:72188405-72188424 | None:intergenic | 40.0% | |
CAAAGAAACAAGGCAGGAAT+TGG | + | chr3.3:72189197-72189216 | MS.gene75529:CDS | 40.0% | |
CATATTGGATGAGGAGAAAC+GGG | - | chr3.3:72190629-72190648 | None:intergenic | 40.0% | |
CATCAAGCGAAGAGTTCTTT+GGG | - | chr3.3:72192601-72192620 | None:intergenic | 40.0% | |
CATTTCATAGGGACCAAAAG+TGG | + | chr3.3:72192012-72192031 | MS.gene75529:intron | 40.0% | |
CCAATGCAGCAGTAAATGTA+TGG | - | chr3.3:72190129-72190148 | None:intergenic | 40.0% | |
CCATACATTTACTGCTGCAT+TGG | + | chr3.3:72190126-72190145 | MS.gene75529:intron | 40.0% | |
CGACTTTACTAGAACTTGTG+AGG | + | chr3.3:72193057-72193076 | MS.gene75529:intron | 40.0% | |
GAGAGGCTAGACAATAAACA+TGG | - | chr3.3:72193038-72193057 | None:intergenic | 40.0% | |
GATTGAAAGATAGACTGTCG+CGG | - | chr3.3:72193619-72193638 | None:intergenic | 40.0% | |
GCATATTGGATGAGGAGAAA+CGG | - | chr3.3:72190630-72190649 | None:intergenic | 40.0% | |
GCGGCTAGAATCATATATGA+AGG | + | chr3.3:72193714-72193733 | MS.gene75529:CDS | 40.0% | |
GCTTCTGCACTACAAAAAGT+TGG | - | chr3.3:72189858-72189877 | None:intergenic | 40.0% | |
GGAAGTAAAACAAGCTGCAT+TGG | + | chr3.3:72190347-72190366 | MS.gene75529:CDS | 40.0% | |
TAACACACGATCATCAACTG+AGG | + | chr3.3:72188931-72188950 | MS.gene75529:CDS | 40.0% | |
TCGAGAAGACAATGGAAAGT+TGG | + | chr3.3:72193669-72193688 | MS.gene75529:CDS | 40.0% | |
TTCCAAAGCAGAGTCAACAT+CGG | - | chr3.3:72188856-72188875 | None:intergenic | 40.0% | |
TTTACTAGAACTTGTGAGGG+TGG | + | chr3.3:72193061-72193080 | MS.gene75529:intron | 40.0% | |
! | AGGTTTGAGCCCATTTTATC+TGG | + | chr3.3:72193438-72193457 | MS.gene75529:intron | 40.0% |
! | CAAGTTCTAGTAAAGTCGAG+AGG | - | chr3.3:72193055-72193074 | None:intergenic | 40.0% |
! | CCATGCGGATTTTGAATGTT+CGG | - | chr3.3:72193881-72193900 | None:intergenic | 40.0% |
! | CTTTTGTAGCTTCCTAGCTA+AGG | + | chr3.3:72193314-72193333 | MS.gene75529:intron | 40.0% |
! | GAGGCATACTTCAGAAGTAT+TGG | + | chr3.3:72193643-72193662 | MS.gene75529:CDS | 40.0% |
! | GGTTTGAGCCCATTTTATCT+GGG | + | chr3.3:72193439-72193458 | MS.gene75529:intron | 40.0% |
! | GTGATAACGTATTTGACTGC+AGG | - | chr3.3:72194254-72194273 | None:intergenic | 40.0% |
! | TGCACAGTAATTTCAAGTCG+GGG | + | chr3.3:72189617-72189636 | MS.gene75529:intron | 40.0% |
!! | ATTCTCCAAAGCATTGAGCT+CGG | - | chr3.3:72188363-72188382 | None:intergenic | 40.0% |
!! | CATTTACTGCTGCATTGGTT+TGG | + | chr3.3:72190131-72190150 | MS.gene75529:intron | 40.0% |
!! | GAGAATCAGGCAAAGCATTT+TGG | - | chr3.3:72190652-72190671 | None:intergenic | 40.0% |
!! | GCATTTTGGCATATTGGATG+AGG | - | chr3.3:72190638-72190657 | None:intergenic | 40.0% |
!! | GGCAAAGCATTTTGGCATAT+TGG | - | chr3.3:72190644-72190663 | None:intergenic | 40.0% |
!! | GTTTTGGGTGATATAAGAGC+GGG | - | chr3.3:72189766-72189785 | None:intergenic | 40.0% |
!! | TACTTCCTCGGCTTTAAGTT+TGG | - | chr3.3:72190334-72190353 | None:intergenic | 40.0% |
!! | TGAATGATTGAGGGCATTGA+CGG | - | chr3.3:72192265-72192284 | None:intergenic | 40.0% |
!! | TTCCATTGCTGCCTTTGTTT+TGG | - | chr3.3:72190400-72190419 | None:intergenic | 40.0% |
!!! | AAAAGTTTTAGGCTAGTCGC+CGG | - | chr3.3:72190170-72190189 | None:intergenic | 40.0% |
!!! | TGCAGCTTGTTTTACTTCCT+CGG | - | chr3.3:72190346-72190365 | None:intergenic | 40.0% |
AAAACCCATACCGGATTCCT+TGG | - | chr3.3:72190526-72190545 | None:intergenic | 45.0% | |
AAAGGCTAAAGCTGAAGCAG+AGG | + | chr3.3:72190016-72190035 | MS.gene75529:CDS | 45.0% | |
AAGTGATGCAGCGTATGAAG+AGG | + | chr3.3:72189950-72189969 | MS.gene75529:CDS | 45.0% | |
AATTCTACTTTGCCCGCAGA+TGG | + | chr3.3:72194050-72194069 | MS.gene75529:intron | 45.0% | |
ACCATTTGTTTGAGTGAGGC+AGG | + | chr3.3:72189489-72189508 | MS.gene75529:intron | 45.0% | |
ACGACAGGTCCCATATGTAA+TGG | + | chr3.3:72193180-72193199 | MS.gene75529:intron | 45.0% | |
AGCCAAAACAAAGGCAGCAA+TGG | + | chr3.3:72190395-72190414 | MS.gene75529:CDS | 45.0% | |
AGGTGGAGTGGAAGAATTAG+CGG | - | chr3.3:72188393-72188412 | None:intergenic | 45.0% | |
CAACAGTATCAGTATCCCCA+CGG | - | chr3.3:72193576-72193595 | None:intergenic | 45.0% | |
CAACTGAGGGTTAATGTGAG+TGG | + | chr3.3:72188945-72188964 | MS.gene75529:intron | 45.0% | |
CATTTGTTTGAGTGAGGCAG+GGG | + | chr3.3:72189491-72189510 | MS.gene75529:intron | 45.0% | |
CCAAAGAACTCTTCGCTTGA+TGG | + | chr3.3:72192599-72192618 | MS.gene75529:intron | 45.0% | |
CCATCAAGCGAAGAGTTCTT+TGG | - | chr3.3:72192602-72192621 | None:intergenic | 45.0% | |
CCATTTGTTTGAGTGAGGCA+GGG | + | chr3.3:72189490-72189509 | MS.gene75529:intron | 45.0% | |
CCGAACATTCAAAATCCGCA+TGG | + | chr3.3:72193878-72193897 | MS.gene75529:CDS | 45.0% | |
CCTCCCCAACTTTATTCATC+AGG | - | chr3.3:72188890-72188909 | None:intergenic | 45.0% | |
CCTGATGAATAAAGTTGGGG+AGG | + | chr3.3:72188887-72188906 | MS.gene75529:CDS | 45.0% | |
CTGCAAAGCAACCTTTCTCT+TGG | - | chr3.3:72189976-72189995 | None:intergenic | 45.0% | |
GATGAGGAGAAACGGGTAAA+GGG | - | chr3.3:72190622-72190641 | None:intergenic | 45.0% | |
GCAGTAGTCTTCACTGAATC+TGG | - | chr3.3:72194174-72194193 | None:intergenic | 45.0% | |
GTATGAAGAGGCCAAGAGAA+AGG | + | chr3.3:72189962-72189981 | MS.gene75529:CDS | 45.0% | |
TATAGATCAAGACACCGAGC+AGG | - | chr3.3:72191045-72191064 | None:intergenic | 45.0% | |
TTGTTTACCATCTGCACGAC+AGG | + | chr3.3:72193165-72193184 | MS.gene75529:intron | 45.0% | |
TTTCCCTGCTTCAAACTCAC+TGG | - | chr3.3:72193366-72193385 | None:intergenic | 45.0% | |
! | CAAGAGAAAGGTTGCTTTGC+AGG | + | chr3.3:72189974-72189993 | MS.gene75529:CDS | 45.0% |
! | GAACCAGTGAGTTTGAAGCA+GGG | + | chr3.3:72193360-72193379 | MS.gene75529:intron | 45.0% |
! | TTGCTGCTTCTGATCCTGAT+TGG | + | chr3.3:72188318-72188337 | MS.gene75529:CDS | 45.0% |
!! | AGAGCATCGAAACTCCAATC+AGG | - | chr3.3:72188335-72188354 | None:intergenic | 45.0% |
!! | TTCCGATGTTGACTCTGCTT+TGG | + | chr3.3:72188851-72188870 | MS.gene75529:CDS | 45.0% |
!!! | TTAAAAAATTCTAATTTTTT+TGG | - | chr3.3:72191862-72191881 | None:intergenic | 5.0% |
AATCAGTGGGAGGAGTGGAA+TGG | - | chr3.3:72191022-72191041 | None:intergenic | 50.0% | |
AGAGCAAATCCAGCCATCTG+CGG | - | chr3.3:72194066-72194085 | None:intergenic | 50.0% | |
CAACCTTCTTGCAAGCCATG+CGG | - | chr3.3:72193896-72193915 | None:intergenic | 50.0% | |
CAGTTCCTTCAAGTGCCAGA+AGG | + | chr3.3:72194222-72194241 | MS.gene75529:CDS | 50.0% | |
CCCTGCCTCACTCAAACAAA+TGG | - | chr3.3:72189493-72189512 | None:intergenic | 50.0% | |
CGCTGTCTGTCTCATACTCA+GGG | - | chr3.3:72188645-72188664 | None:intergenic | 50.0% | |
GAAGACTACTGCGTACATGC+AGG | + | chr3.3:72194182-72194201 | MS.gene75529:CDS | 50.0% | |
GACACCAAGGAATCCGGTAT+GGG | + | chr3.3:72190519-72190538 | MS.gene75529:intron | 50.0% | |
GCCACGAGAGTGATATTTCC+CGG | + | chr3.3:72191513-72191532 | MS.gene75529:CDS | 50.0% | |
GCTGTCTGTCTCATACTCAG+GGG | - | chr3.3:72188644-72188663 | None:intergenic | 50.0% | |
GGAAATATCACTCTCGTGGC+GGG | - | chr3.3:72191513-72191532 | None:intergenic | 50.0% | |
GGATGAGGAGAAACGGGTAA+AGG | - | chr3.3:72190623-72190642 | None:intergenic | 50.0% | |
GGGAAATATCACTCTCGTGG+CGG | - | chr3.3:72191514-72191533 | None:intergenic | 50.0% | |
GGGGCATAAGGGACAATGTT+AGG | + | chr3.3:72191552-72191571 | MS.gene75529:CDS | 50.0% | |
TCCGGGAAATATCACTCTCG+TGG | - | chr3.3:72191517-72191536 | None:intergenic | 50.0% | |
TCCTTCAAGTGCCAGAAGGA+AGG | + | chr3.3:72194226-72194245 | MS.gene75529:CDS | 50.0% | |
TCCTTCCTTCTGGCACTTGA+AGG | - | chr3.3:72194230-72194249 | None:intergenic | 50.0% | |
TCGCTGTCTGTCTCATACTC+AGG | - | chr3.3:72188646-72188665 | None:intergenic | 50.0% | |
TGACACCAAGGAATCCGGTA+TGG | + | chr3.3:72190518-72190537 | MS.gene75529:intron | 50.0% | |
TGAGTATGAGACAGACAGCG+AGG | + | chr3.3:72188645-72188664 | MS.gene75529:CDS | 50.0% | |
TGTGAGGGTGGTAGTCTTCA+AGG | + | chr3.3:72193073-72193092 | MS.gene75529:intron | 50.0% | |
! | AATCCGCATGGCTTGCAAGA+AGG | + | chr3.3:72193890-72193909 | MS.gene75529:CDS | 50.0% |
! | GAGAAAGGTTGCTTTGCAGG+AGG | + | chr3.3:72189977-72189996 | MS.gene75529:CDS | 50.0% |
! | GCATGGCTTGCAAGAAGGTT+GGG | + | chr3.3:72193895-72193914 | MS.gene75529:CDS | 50.0% |
! | GCGTTAGTAGTATCGGACAC+TGG | + | chr3.3:72188682-72188701 | MS.gene75529:CDS | 50.0% |
! | GGAACCAGTGAGTTTGAAGC+AGG | + | chr3.3:72193359-72193378 | MS.gene75529:intron | 50.0% |
! | TATGAAGGTGTACGGTGCAC+TGG | + | chr3.3:72193729-72193748 | MS.gene75529:CDS | 50.0% |
!! | ATTGCAAAGGGAGCACTAGC+AGG | - | chr3.3:72192979-72192998 | None:intergenic | 50.0% |
!! | GTAAACCAGGTGCTTTGGGA+CGG | - | chr3.3:72193245-72193264 | None:intergenic | 50.0% |
!! | TTGCAAAGGGAGCACTAGCA+GGG | - | chr3.3:72192978-72192997 | None:intergenic | 50.0% |
AGACACCGAGCAGGAATCAG+TGG | - | chr3.3:72191036-72191055 | None:intergenic | 55.0% | |
CGTCTCCGAGCTCAATGCTT+TGG | + | chr3.3:72188355-72188374 | MS.gene75529:CDS | 55.0% | |
CTGTCTCATACTCAGGGGCA+CGG | - | chr3.3:72188639-72188658 | None:intergenic | 55.0% | |
GACACCGAGCAGGAATCAGT+GGG | - | chr3.3:72191035-72191054 | None:intergenic | 55.0% | |
GACTGCAGGTTCCTTCCTTC+TGG | - | chr3.3:72194240-72194259 | None:intergenic | 55.0% | |
GAGCAAATCCAGCCATCTGC+GGG | - | chr3.3:72194065-72194084 | None:intergenic | 55.0% | |
GCAGGCCAAACTTAAAGCCG+AGG | + | chr3.3:72190326-72190345 | MS.gene75529:intron | 55.0% | |
GCATAGTCAGCTGCTCACTC+AGG | - | chr3.3:72193837-72193856 | None:intergenic | 55.0% | |
GCGAAGAGTTCTTTGGGCCT+TGG | - | chr3.3:72192595-72192614 | None:intergenic | 55.0% | |
GGGGCAGGACGTCTTACATT+TGG | - | chr3.3:72189251-72189270 | None:intergenic | 55.0% | |
TATGGGACCTGTCGTGCAGA+TGG | - | chr3.3:72193175-72193194 | None:intergenic | 55.0% | |
! | CGCATGGCTTGCAAGAAGGT+TGG | + | chr3.3:72193894-72193913 | MS.gene75529:CDS | 55.0% |
! | TTACACCGTCCCAAAGCACC+TGG | + | chr3.3:72193237-72193256 | MS.gene75529:CDS | 55.0% |
!! | GGTGCTTTGGGACGGTGTAA+AGG | - | chr3.3:72193237-72193256 | None:intergenic | 55.0% |
!! | TCCTCCCACTGATTCCTGCT+CGG | + | chr3.3:72191028-72191047 | MS.gene75529:intron | 55.0% |
ACCGAGCAGGAATCAGTGGG+AGG | - | chr3.3:72191032-72191051 | None:intergenic | 60.0% | |
AGCACTAGCAGGGCTTGCAC+AGG | - | chr3.3:72192968-72192987 | None:intergenic | 60.0% | |
CTACTTTGCCCGCAGATGGC+TGG | + | chr3.3:72194054-72194073 | MS.gene75529:intron | 60.0% | |
GCAGGAATCAGTGGGAGGAG+TGG | - | chr3.3:72191027-72191046 | None:intergenic | 60.0% | |
GCTTGCAAGAAGGTTGGGCG+TGG | + | chr3.3:72193900-72193919 | MS.gene75529:CDS | 60.0% | |
! | AAGGTTGGGCGTGGCTTGCA+AGG | + | chr3.3:72193909-72193928 | MS.gene75529:CDS | 60.0% |
!! | GGTGTACGGTGCACTGGTTC+AGG | + | chr3.3:72193735-72193754 | MS.gene75529:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 72188287 | 72194290 | 72188287 | ID=MS.gene75529 |
chr3.3 | mRNA | 72188287 | 72194290 | 72188287 | ID=MS.gene75529.t1;Parent=MS.gene75529 |
chr3.3 | exon | 72188287 | 72188441 | 72188287 | ID=MS.gene75529.t1.exon1;Parent=MS.gene75529.t1 |
chr3.3 | CDS | 72188287 | 72188441 | 72188287 | ID=cds.MS.gene75529.t1;Parent=MS.gene75529.t1 |
chr3.3 | exon | 72188585 | 72188737 | 72188585 | ID=MS.gene75529.t1.exon2;Parent=MS.gene75529.t1 |
chr3.3 | CDS | 72188585 | 72188737 | 72188585 | ID=cds.MS.gene75529.t1;Parent=MS.gene75529.t1 |
chr3.3 | exon | 72188839 | 72188959 | 72188839 | ID=MS.gene75529.t1.exon3;Parent=MS.gene75529.t1 |
chr3.3 | CDS | 72188839 | 72188959 | 72188839 | ID=cds.MS.gene75529.t1;Parent=MS.gene75529.t1 |
chr3.3 | exon | 72189105 | 72189253 | 72189105 | ID=MS.gene75529.t1.exon4;Parent=MS.gene75529.t1 |
chr3.3 | CDS | 72189105 | 72189253 | 72189105 | ID=cds.MS.gene75529.t1;Parent=MS.gene75529.t1 |
chr3.3 | exon | 72189869 | 72190037 | 72189869 | ID=MS.gene75529.t1.exon5;Parent=MS.gene75529.t1 |
chr3.3 | CDS | 72189869 | 72190037 | 72189869 | ID=cds.MS.gene75529.t1;Parent=MS.gene75529.t1 |
chr3.3 | exon | 72190330 | 72190534 | 72190330 | ID=MS.gene75529.t1.exon6;Parent=MS.gene75529.t1 |
chr3.3 | CDS | 72190330 | 72190534 | 72190330 | ID=cds.MS.gene75529.t1;Parent=MS.gene75529.t1 |
chr3.3 | exon | 72191130 | 72191239 | 72191130 | ID=MS.gene75529.t1.exon7;Parent=MS.gene75529.t1 |
chr3.3 | CDS | 72191130 | 72191239 | 72191130 | ID=cds.MS.gene75529.t1;Parent=MS.gene75529.t1 |
chr3.3 | exon | 72191503 | 72191573 | 72191503 | ID=MS.gene75529.t1.exon8;Parent=MS.gene75529.t1 |
chr3.3 | CDS | 72191503 | 72191573 | 72191503 | ID=cds.MS.gene75529.t1;Parent=MS.gene75529.t1 |
chr3.3 | exon | 72192226 | 72192307 | 72192226 | ID=MS.gene75529.t1.exon9;Parent=MS.gene75529.t1 |
chr3.3 | CDS | 72192226 | 72192307 | 72192226 | ID=cds.MS.gene75529.t1;Parent=MS.gene75529.t1 |
chr3.3 | exon | 72192955 | 72193029 | 72192955 | ID=MS.gene75529.t1.exon10;Parent=MS.gene75529.t1 |
chr3.3 | CDS | 72192955 | 72193029 | 72192955 | ID=cds.MS.gene75529.t1;Parent=MS.gene75529.t1 |
chr3.3 | exon | 72193187 | 72193270 | 72193187 | ID=MS.gene75529.t1.exon11;Parent=MS.gene75529.t1 |
chr3.3 | CDS | 72193187 | 72193270 | 72193187 | ID=cds.MS.gene75529.t1;Parent=MS.gene75529.t1 |
chr3.3 | exon | 72193625 | 72193756 | 72193625 | ID=MS.gene75529.t1.exon12;Parent=MS.gene75529.t1 |
chr3.3 | CDS | 72193625 | 72193756 | 72193625 | ID=cds.MS.gene75529.t1;Parent=MS.gene75529.t1 |
chr3.3 | exon | 72193869 | 72193991 | 72193869 | ID=MS.gene75529.t1.exon13;Parent=MS.gene75529.t1 |
chr3.3 | CDS | 72193869 | 72193991 | 72193869 | ID=cds.MS.gene75529.t1;Parent=MS.gene75529.t1 |
chr3.3 | exon | 72194069 | 72194290 | 72194069 | ID=MS.gene75529.t1.exon14;Parent=MS.gene75529.t1 |
chr3.3 | CDS | 72194069 | 72194290 | 72194069 | ID=cds.MS.gene75529.t1;Parent=MS.gene75529.t1 |
Gene Sequence |
Protein sequence |