Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75586.t1 | XP_003601813.2 | 98.1 | 675 | 13 | 0 | 1 | 675 | 28 | 702 | 0.00E+00 | 1336.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75586.t1 | P42534 | 28.7 | 662 | 406 | 20 | 19 | 672 | 21 | 624 | 6.5e-48 | 193.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75586.t1 | G7JC21 | 98.1 | 675 | 13 | 0 | 1 | 675 | 28 | 702 | 0.0e+00 | 1336.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052333 | MS.gene75586 | 0.807385 | 5.19E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene75586 | 0.800253 | 1.57E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75586.t1 | MTR_3g085660 | 98.074 | 675 | 13 | 0 | 1 | 675 | 28 | 702 | 0.0 | 1370 |
| MS.gene75586.t1 | MTR_3g085660 | 94.168 | 703 | 13 | 1 | 1 | 675 | 28 | 730 | 0.0 | 1354 |
| MS.gene75586.t1 | MTR_3g085660 | 97.970 | 542 | 11 | 0 | 134 | 675 | 1 | 542 | 0.0 | 1102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75586.t1 | AT1G24340 | 64.905 | 681 | 230 | 5 | 1 | 673 | 28 | 707 | 0.0 | 936 |
Find 165 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATATTGCACTTCCCTTTC+TGG | 0.081338 | 3.3:+71491707 | MS.gene75586:CDS |
| TCCCTTTCTGGTTCAATTCT+TGG | 0.109991 | 3.3:+71491719 | MS.gene75586:CDS |
| GTTCATAAAGTTATTATTAA+TGG | 0.190701 | 3.3:+71494371 | MS.gene75586:intron |
| TTTAGCTCGTGAAGCATTTA+AGG | 0.199668 | 3.3:+71495168 | MS.gene75586:CDS |
| TCTATTCTGCTCACAAAATT+AGG | 0.208328 | 3.3:+71491072 | MS.gene75586:CDS |
| TTCATAAAGTTATTATTAAT+GGG | 0.269255 | 3.3:+71494372 | MS.gene75586:CDS |
| CAAGGCGTTTGCTAAGAAAA+TGG | 0.280874 | 3.3:-71492313 | None:intergenic |
| TAGGTATTTAGCATTGAATT+TGG | 0.282867 | 3.3:-71494000 | None:intergenic |
| AGGTATTTAGCATTGAATTT+GGG | 0.290261 | 3.3:-71493999 | None:intergenic |
| ATCCACTGTAACATCCTTAT+TGG | 0.291776 | 3.3:+71492206 | MS.gene75586:CDS |
| CAGTTCCCTGCTGAAGATCT+TGG | 0.292056 | 3.3:+71494563 | MS.gene75586:CDS |
| CTTATTTCCTTCTGAGCTTT+CGG | 0.299934 | 3.3:-71492066 | None:intergenic |
| ACTGCGTCGTCTGTCAATAA+TGG | 0.302510 | 3.3:+71492164 | MS.gene75586:CDS |
| TTTCCACCTGCTGGTGGATT+TGG | 0.305223 | 3.3:+71493143 | MS.gene75586:CDS |
| ATCTTCAATACTGAAGCAAT+TGG | 0.327847 | 3.3:+71492377 | MS.gene75586:CDS |
| CTCAACCACCGGTAGACTTA+TGG | 0.336936 | 3.3:+71491675 | MS.gene75586:CDS |
| AAACTTGTTGGTCAAGAGTT+TGG | 0.346615 | 3.3:+71493011 | MS.gene75586:CDS |
| TGGTCTACTGATTCTGTTGA+AGG | 0.354114 | 3.3:+71495232 | MS.gene75586:CDS |
| CTGCTCCATCTGCACCAATA+AGG | 0.358829 | 3.3:-71492220 | None:intergenic |
| TTTGTTCAACAACTTCAAAT+TGG | 0.359180 | 3.3:+71495317 | MS.gene75586:CDS |
| CTACCGGTGGTTGAGACCTT+TGG | 0.367562 | 3.3:-71491667 | None:intergenic |
| TAGATATTCCGCAAGATTGA+TGG | 0.367809 | 3.3:+71491629 | MS.gene75586:intron |
| CAAGACTTGCTGGGGATCCT+AGG | 0.367932 | 3.3:+71495416 | MS.gene75586:CDS |
| CGTGCAATTTCAAGACTTGC+TGG | 0.368975 | 3.3:+71495406 | MS.gene75586:CDS |
| GACGTCTGCATAATTCTTCC+AGG | 0.377102 | 3.3:-71495287 | None:intergenic |
| TTCTTGTTGCTCATGATCTC+AGG | 0.380602 | 3.3:+71492402 | MS.gene75586:CDS |
| AGGTATTAATTGCACAGTTT+TGG | 0.382274 | 3.3:+71491468 | MS.gene75586:intron |
| TGGTGATGATGCGGTGCTTC+CGG | 0.382502 | 3.3:+71491011 | MS.gene75586:CDS |
| CTCAAGCAACTTGAAAATCT+AGG | 0.388037 | 3.3:+71492026 | MS.gene75586:CDS |
| TCTTCAATACTGAAGCAATT+GGG | 0.389195 | 3.3:+71492378 | MS.gene75586:CDS |
| GTGCTTCCGGTTCTGATCAT+TGG | 0.389428 | 3.3:+71491024 | MS.gene75586:CDS |
| ACTAATATAGCCCCTTTGTT+TGG | 0.396079 | 3.3:-71495358 | None:intergenic |
| CGGATTGCAGAGGCTAGCTT+TGG | 0.405690 | 3.3:+71494415 | MS.gene75586:CDS |
| GAAGTCATTGTTGGTGTCAA+TGG | 0.406206 | 3.3:-71492132 | None:intergenic |
| GGCAACCGAATATTACTTGC+CGG | 0.407417 | 3.3:+71493104 | MS.gene75586:CDS |
| CCGGTTCTGATCATTGGTGC+AGG | 0.412608 | 3.3:+71491030 | MS.gene75586:CDS |
| AGCTTTCGGATGCACATGTT+TGG | 0.415105 | 3.3:-71492052 | None:intergenic |
| TCCTCAATTGTTTGCTGAGG+TGG | 0.421766 | 3.3:-71492549 | None:intergenic |
| TGGGGATCCTAGGGCGGAAA+TGG | 0.422402 | 3.3:+71495426 | MS.gene75586:CDS |
| TGGTCTACGCTCCATGTCAT+AGG | 0.423180 | 3.3:-71494019 | None:intergenic |
| TTGTGAAAACAAAATATTGA+TGG | 0.426764 | 3.3:+71492094 | MS.gene75586:CDS |
| CTGCGTCGTCTGTCAATAAT+GGG | 0.427463 | 3.3:+71492165 | MS.gene75586:CDS |
| GAAAATAGCTTCTGTGATCA+AGG | 0.429421 | 3.3:+71493969 | MS.gene75586:CDS |
| CTGCATCCTGGTTGTGCTGA+AGG | 0.435143 | 3.3:-71494907 | None:intergenic |
| CGCCAGGCAATATGTTCATC+AGG | 0.435939 | 3.3:-71495385 | None:intergenic |
| TCCAAGAATTGAACCAGAAA+GGG | 0.441874 | 3.3:-71491720 | None:intergenic |
| GTAATCCCCTTGGATCTTCA+AGG | 0.443476 | 3.3:+71494492 | MS.gene75586:CDS |
| AGGAATGAATACTGGCATTC+AGG | 0.444544 | 3.3:+71493927 | MS.gene75586:intron |
| TACTGTTACGAAGTCATTGT+TGG | 0.444788 | 3.3:-71492141 | None:intergenic |
| TGGTTCAATTCTTGGATCTG+TGG | 0.447140 | 3.3:+71491727 | MS.gene75586:CDS |
| TCTGTTGAAGGACTTGATAA+TGG | 0.449346 | 3.3:+71495244 | MS.gene75586:CDS |
| AAAGTTATTATTAATGGGGT+TGG | 0.451927 | 3.3:+71494377 | MS.gene75586:CDS |
| TCTACGCACGATCTTGTGTC+TGG | 0.452924 | 3.3:+71495094 | MS.gene75586:CDS |
| CATCACCGGCAAGTAATATT+CGG | 0.453625 | 3.3:-71493109 | None:intergenic |
| GAGAAGTGTGCCACAGAGAT+TGG | 0.454489 | 3.3:-71491978 | None:intergenic |
| ATCATTGGTGCAGGGCCTGT+GGG | 0.458574 | 3.3:+71491039 | MS.gene75586:CDS |
| AAGTCTTGAAATTGCACGCC+AGG | 0.459833 | 3.3:-71495401 | None:intergenic |
| AAGTTAATCAGCAAACTTGT+TGG | 0.467367 | 3.3:+71492999 | MS.gene75586:CDS |
| TTTATTCTCACAAACATATG+AGG | 0.467873 | 3.3:-71494934 | None:intergenic |
| CTGGCACAATTGCACCTTGT+AGG | 0.469642 | 3.3:-71494825 | None:intergenic |
| CAGCAGGGAACTGAAGTTGA+AGG | 0.472031 | 3.3:-71494553 | None:intergenic |
| CTAAGACATATATTTGAAGA+AGG | 0.472224 | 3.3:+71494524 | MS.gene75586:CDS |
| TAATGGGAAGCGTGTAGAAA+AGG | 0.472247 | 3.3:+71492181 | MS.gene75586:CDS |
| GTTTGCTGAGGTGGATAAAA+CGG | 0.478293 | 3.3:-71492540 | None:intergenic |
| CAAAGCTAGCCTCTGCAATC+CGG | 0.478829 | 3.3:-71494414 | None:intergenic |
| TGCATCCTGGTTGTGCTGAA+GGG | 0.479361 | 3.3:-71494906 | None:intergenic |
| TTCAACAACTTCAAATTGGT+GGG | 0.482912 | 3.3:+71495321 | MS.gene75586:CDS |
| TCCACCTCAGCAAACAATTG+AGG | 0.485714 | 3.3:+71492548 | MS.gene75586:CDS |
| GCTCATCGATTTCCACCTGC+TGG | 0.485774 | 3.3:+71493134 | MS.gene75586:CDS |
| ATCCAAGAATTGAACCAGAA+AGG | 0.486124 | 3.3:-71491721 | None:intergenic |
| GTTGGTTCCATCTTACCATC+CGG | 0.494446 | 3.3:+71494395 | MS.gene75586:CDS |
| TGTGTAACATGCCAAACAAA+GGG | 0.495132 | 3.3:+71495347 | MS.gene75586:CDS |
| CATCGATTTCCACCTGCTGG+TGG | 0.495555 | 3.3:+71493137 | MS.gene75586:CDS |
| ATGTCTGTTCCTGCCACACT+TGG | 0.497611 | 3.3:+71494184 | MS.gene75586:CDS |
| GTTCAACAACTTCAAATTGG+TGG | 0.498968 | 3.3:+71495320 | MS.gene75586:CDS |
| CCTGCACCAATGATCAGAAC+CGG | 0.503338 | 3.3:-71491030 | None:intergenic |
| AAATGATAAGATTCCTTCAC+TGG | 0.503770 | 3.3:-71495148 | None:intergenic |
| CGGTTCTGATCATTGGTGCA+GGG | 0.503828 | 3.3:+71491031 | MS.gene75586:CDS |
| GTGCAATTTCAAGACTTGCT+GGG | 0.505567 | 3.3:+71495407 | MS.gene75586:CDS |
| GATCATTGGTGCAGGGCCTG+TGG | 0.512433 | 3.3:+71491038 | MS.gene75586:CDS |
| AGGATGCCCATAATCTTGCC+TGG | 0.513856 | 3.3:+71493947 | MS.gene75586:CDS |
| TCAAAGGCAGAAGTTATCAA+TGG | 0.513919 | 3.3:+71490991 | MS.gene75586:CDS |
| CGACGACCTGTGGGTACTTG+TGG | 0.514254 | 3.3:-71494871 | None:intergenic |
| AAAAGTGCTCTTAACCTCCA+TGG | 0.516291 | 3.3:-71491545 | None:intergenic |
| AACATCCTTATTGGTGCAGA+TGG | 0.517025 | 3.3:+71492215 | MS.gene75586:CDS |
| CTAAAACCAAGATCTTCAGC+AGG | 0.517457 | 3.3:-71494569 | None:intergenic |
| TCCTAGGGCGGAAATGGAAA+AGG | 0.517735 | 3.3:+71495432 | MS.gene75586:CDS |
| GGATCGAGACCAAGTGTGGC+AGG | 0.518266 | 3.3:-71494193 | None:intergenic |
| CTGCAATCCGGATGGTAAGA+TGG | 0.519314 | 3.3:-71494402 | None:intergenic |
| GTACCTGTGTTTGCAACAGT+TGG | 0.519942 | 3.3:-71494214 | None:intergenic |
| CTAAATGAAAGTAATCCCCT+TGG | 0.522160 | 3.3:+71494482 | MS.gene75586:CDS |
| CTTATTGGTGCAGATGGAGC+AGG | 0.524465 | 3.3:+71492221 | MS.gene75586:CDS |
| AAGACTTGCTGGGGATCCTA+GGG | 0.524904 | 3.3:+71495417 | MS.gene75586:CDS |
| GGTATTTAGCATTGAATTTG+GGG | 0.527978 | 3.3:-71493998 | None:intergenic |
| ATAGTCCCTGCGACGACCTG+TGG | 0.533674 | 3.3:-71494881 | None:intergenic |
| AAGTACCCACAGGTCGTCGC+AGG | 0.534199 | 3.3:+71494875 | MS.gene75586:CDS |
| CTCTCAACATCACTACTCTC+TGG | 0.535692 | 3.3:-71494844 | None:intergenic |
| AAATCGATGAGCAGCATCAC+CGG | 0.538671 | 3.3:-71493123 | None:intergenic |
| AGAAGTGTGCCACAGAGATT+GGG | 0.539436 | 3.3:-71491977 | None:intergenic |
| TGCAATTTCAAGACTTGCTG+GGG | 0.540714 | 3.3:+71495408 | MS.gene75586:CDS |
| AGTACTGTGAGAAAGCTTGT+AGG | 0.541306 | 3.3:+71492245 | MS.gene75586:CDS |
| CTTCAATACTGAAGCAATTG+GGG | 0.547597 | 3.3:+71492379 | MS.gene75586:CDS |
| TAAGACATATATTTGAAGAA+GGG | 0.553785 | 3.3:+71494525 | MS.gene75586:CDS |
| GCATCCTGGTTGTGCTGAAG+GGG | 0.555331 | 3.3:-71494905 | None:intergenic |
| TAGCCAACCTTGAAGATCCA+AGG | 0.555766 | 3.3:-71494499 | None:intergenic |
| TGTGAAAACAAAATATTGAT+GGG | 0.558569 | 3.3:+71492095 | MS.gene75586:CDS |
| TCCCCTTGGATCTTCAAGGT+TGG | 0.560559 | 3.3:+71494496 | MS.gene75586:CDS |
| GATCCAAAGGTCTCAACCAC+CGG | 0.562499 | 3.3:+71491664 | MS.gene75586:CDS |
| AACTTCCTCCATAAGTCTAC+CGG | 0.565397 | 3.3:-71491683 | None:intergenic |
| GACCTGATGAACATATTGCC+TGG | 0.568148 | 3.3:+71495383 | MS.gene75586:CDS |
| AATTGAGGATTTCAATCCAA+AGG | 0.571066 | 3.3:+71492563 | MS.gene75586:CDS |
| AACTTACCAAATCCACCAGC+AGG | 0.571616 | 3.3:-71493149 | None:intergenic |
| TTGTTGATGAAGTGTGCTTG+TGG | 0.575625 | 3.3:-71491517 | None:intergenic |
| TGTGCATCCGAAAGCTCAGA+AGG | 0.577208 | 3.3:+71492059 | MS.gene75586:CDS |
| ATGTGTAACATGCCAAACAA+AGG | 0.580637 | 3.3:+71495346 | MS.gene75586:CDS |
| TGAAGCATTTAAGGTGGCTG+AGG | 0.581315 | 3.3:+71495177 | MS.gene75586:CDS |
| AGATCTCTGTATTCAATACA+AGG | 0.581651 | 3.3:+71494134 | MS.gene75586:intron |
| ATATGAGGCAGTCTGCATCC+TGG | 0.592377 | 3.3:-71494919 | None:intergenic |
| TCATAAAGTTATTATTAATG+GGG | 0.592469 | 3.3:+71494373 | MS.gene75586:CDS |
| GCCTTGTTGAAGAGATCCAA+AGG | 0.594128 | 3.3:+71491651 | MS.gene75586:CDS |
| AGCCAACCTTGAAGATCCAA+GGG | 0.595544 | 3.3:-71494498 | None:intergenic |
| AGCTCGTGAAGCATTTAAGG+TGG | 0.596527 | 3.3:+71495171 | MS.gene75586:CDS |
| ATTCACCATATGCAAAGCAG+AGG | 0.601226 | 3.3:+71490964 | None:intergenic |
| CTTCATCAACAATCGATCCA+TGG | 0.603043 | 3.3:+71491528 | MS.gene75586:CDS |
| TCTCATCATAGCACCAGTGA+AGG | 0.603320 | 3.3:+71495135 | MS.gene75586:CDS |
| ATAGAAAGAACAAGACCCAC+AGG | 0.604796 | 3.3:-71491054 | None:intergenic |
| CGACCTGTGGGTACTTGTGG+AGG | 0.605662 | 3.3:-71494868 | None:intergenic |
| CAACAAGGCCATCAATCTTG+CGG | 0.606381 | 3.3:-71491637 | None:intergenic |
| GAGAATAAACGCATTAAGCG+AGG | 0.608106 | 3.3:+71494948 | MS.gene75586:CDS |
| AAGTTGCTTGAGAAGTAACA+TGG | 0.610637 | 3.3:-71492015 | None:intergenic |
| ACTTCAGCATGCATAATCCA+TGG | 0.610652 | 3.3:-71493059 | None:intergenic |
| GCTGAGAGGTTTATATGTTG+TGG | 0.611379 | 3.3:+71493083 | MS.gene75586:CDS |
| AAAATAGCTTCTGTGATCAA+GGG | 0.616669 | 3.3:+71493970 | MS.gene75586:CDS |
| TATACCCCTTCAGCACAACC+AGG | 0.621458 | 3.3:+71494901 | MS.gene75586:CDS |
| GTTGCTCATGATCTCAGGCA+AGG | 0.621885 | 3.3:+71492407 | MS.gene75586:CDS |
| ACCTTTGGATCTCTTCAACA+AGG | 0.628297 | 3.3:-71491652 | None:intergenic |
| AAATCCTCAATTGTTTGCTG+AGG | 0.632592 | 3.3:-71492552 | None:intergenic |
| GCTAGCCTCTGCAATCCGGA+TGG | 0.636081 | 3.3:-71494410 | None:intergenic |
| AACCACCGGTAGACTTATGG+AGG | 0.638922 | 3.3:+71491678 | MS.gene75586:CDS |
| ACTTGCTGGGGATCCTAGGG+CGG | 0.639307 | 3.3:+71495420 | MS.gene75586:CDS |
| AAGTGTGGCAGGAACAGACA+TGG | 0.640949 | 3.3:-71494182 | None:intergenic |
| GTGGATCACATACAGCCTCA+AGG | 0.644742 | 3.3:+71491746 | MS.gene75586:CDS |
| ACGTCTGCATAATTCTTCCA+GGG | 0.644953 | 3.3:-71495286 | None:intergenic |
| ATGTAATTGATATAAAGCCA+TGG | 0.645439 | 3.3:+71493042 | MS.gene75586:CDS |
| GTAAAGAAGCATTATCACCC+TGG | 0.646087 | 3.3:+71495269 | MS.gene75586:CDS |
| TAGTCCCTGCGACGACCTGT+GGG | 0.647490 | 3.3:-71494880 | None:intergenic |
| TTACCAAATCCACCAGCAGG+TGG | 0.651068 | 3.3:-71493146 | None:intergenic |
| TTCCTCCATAAGTCTACCGG+TGG | 0.651455 | 3.3:-71491680 | None:intergenic |
| AGTCCTCCACAAGTACCCAC+AGG | 0.654704 | 3.3:+71494865 | MS.gene75586:CDS |
| TAAAACCAAGATCTTCAGCA+GGG | 0.655191 | 3.3:-71494568 | None:intergenic |
| CACCAATAAGGATGTTACAG+TGG | 0.656608 | 3.3:-71492208 | None:intergenic |
| TCTTACCATCCGGATTGCAG+AGG | 0.660030 | 3.3:+71494405 | MS.gene75586:CDS |
| GATCCAACTGTTGCAAACAC+AGG | 0.660864 | 3.3:+71494211 | MS.gene75586:CDS |
| CTTGTAGGAATAGATATGAG+AGG | 0.664599 | 3.3:+71492260 | MS.gene75586:CDS |
| AGTACCCACAGGTCGTCGCA+GGG | 0.664824 | 3.3:+71494876 | MS.gene75586:CDS |
| AATGCTAAATACCTATGACA+TGG | 0.665978 | 3.3:+71494008 | MS.gene75586:CDS |
| AGTTGGATCGAGACCAAGTG+TGG | 0.667121 | 3.3:-71494197 | None:intergenic |
| GCAAAGCAGAGGTTTCTCAA+AGG | 0.679356 | 3.3:+71490975 | MS.gene75586:CDS |
| TGTTGTCAGCCCAATCTCTG+TGG | 0.693896 | 3.3:+71491968 | MS.gene75586:CDS |
| GTTGAACTTAGGTACCTACA+AGG | 0.698875 | 3.3:+71494811 | MS.gene75586:intron |
| GTGTAACATGCCAAACAAAG+GGG | 0.701781 | 3.3:+71495348 | MS.gene75586:CDS |
| CATCAACAATCGATCCATGG+AGG | 0.714916 | 3.3:+71491531 | MS.gene75586:CDS |
| GCCAACCTTGAAGATCCAAG+GGG | 0.718704 | 3.3:-71494497 | None:intergenic |
| AGTTATCAATGGTGATGATG+CGG | 0.725236 | 3.3:+71491002 | MS.gene75586:CDS |
| TGCATGCTGAAGTTGCTGAG+AGG | 0.733188 | 3.3:+71493069 | MS.gene75586:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATATAAATTTAAAA+AGG | - | chr3.3:71494068-71494087 | None:intergenic | 0.0% |
| !! | TATAAATATAAATTTAAAAA+GGG | - | chr3.3:71494067-71494086 | None:intergenic | 0.0% |
| !! | TTCATAAAGTTATTATTAAT+GGG | + | chr3.3:71494372-71494391 | MS.gene75586:CDS | 10.0% |
| !! | GTTCATAAAGTTATTATTAA+TGG | + | chr3.3:71494371-71494390 | MS.gene75586:intron | 15.0% |
| !! | TCATAAAGTTATTATTAATG+GGG | + | chr3.3:71494373-71494392 | MS.gene75586:CDS | 15.0% |
| !! | TGATAAATGTCATTAAAAAT+CGG | - | chr3.3:71492619-71492638 | None:intergenic | 15.0% |
| !!! | AATAGGAAGATTATTATTTT+AGG | + | chr3.3:71491812-71491831 | MS.gene75586:intron | 15.0% |
| !!! | ATAGGAAGATTATTATTTTA+GGG | + | chr3.3:71491813-71491832 | MS.gene75586:intron | 15.0% |
| !!! | TAAATTTTTGTTATTTGGTA+AGG | - | chr3.3:71494326-71494345 | None:intergenic | 15.0% |
| !!! | TCAGTTAAATTTTTGTTATT+TGG | - | chr3.3:71494331-71494350 | None:intergenic | 15.0% |
| !!! | TTTGATTTTACATTTTTGTA+TGG | + | chr3.3:71494681-71494700 | MS.gene75586:intron | 15.0% |
| !!! | TTTGTTATTTTTCATGATAT+AGG | - | chr3.3:71491358-71491377 | None:intergenic | 15.0% |
| !! | AAAAGTAGGAATTAATCAAT+TGG | - | chr3.3:71491120-71491139 | None:intergenic | 20.0% |
| !! | CAATCAAATAATCTTACAAA+TGG | + | chr3.3:71494284-71494303 | MS.gene75586:intron | 20.0% |
| !! | TAAGACATATATTTGAAGAA+GGG | + | chr3.3:71494525-71494544 | MS.gene75586:CDS | 20.0% |
| !! | TGTGAAAACAAAATATTGAT+GGG | + | chr3.3:71492095-71492114 | MS.gene75586:CDS | 20.0% |
| !! | TTGTGAAAACAAAATATTGA+TGG | + | chr3.3:71492094-71492113 | MS.gene75586:CDS | 20.0% |
| !!! | AAATTGATGATATAAGACAT+AGG | + | chr3.3:71491398-71491417 | MS.gene75586:intron | 20.0% |
| !!! | AATTGATGATATAAGACATA+GGG | + | chr3.3:71491399-71491418 | MS.gene75586:intron | 20.0% |
| !!! | ATAAAAGATAAAAGCATTAC+TGG | - | chr3.3:71494042-71494061 | None:intergenic | 20.0% |
| !!! | ATATATCATAATGCCTTTTT+TGG | - | chr3.3:71491589-71491608 | None:intergenic | 20.0% |
| !!! | ATATCTGTTTTCAAAATCTT+TGG | + | chr3.3:71493570-71493589 | MS.gene75586:intron | 20.0% |
| !!! | ATCAATATTTTGTTTTCACA+AGG | - | chr3.3:71492095-71492114 | None:intergenic | 20.0% |
| !!! | ATTTTCAAACAAACTTCATA+AGG | - | chr3.3:71491156-71491175 | None:intergenic | 20.0% |
| !!! | GATGATTTTATTTCCAAAAA+AGG | + | chr3.3:71491573-71491592 | MS.gene75586:intron | 20.0% |
| !!! | TAAAACATAAAGTTTTGAAG+AGG | + | chr3.3:71492669-71492688 | MS.gene75586:intron | 20.0% |
| !!! | TCATATTTTTCTTTTTCCAT+GGG | + | chr3.3:71493266-71493285 | MS.gene75586:intron | 20.0% |
| !!! | TTATGATATATTTTGACTGT+TGG | + | chr3.3:71491598-71491617 | MS.gene75586:intron | 20.0% |
| !!! | TTCATATTTTTCTTTTTCCA+TGG | + | chr3.3:71493265-71493284 | MS.gene75586:intron | 20.0% |
| ! | AAAGTTATTATTAATGGGGT+TGG | + | chr3.3:71494377-71494396 | MS.gene75586:CDS | 25.0% |
| ! | AATACCTGCAATAAAACAAA+AGG | - | chr3.3:71491455-71491474 | None:intergenic | 25.0% |
| ! | AATTTAATCAGCAAACTTGT+TGG | + | chr3.3:71492783-71492802 | MS.gene75586:intron | 25.0% |
| ! | ATCTTGTTAAAGCTAAAACA+TGG | + | chr3.3:71492656-71492675 | MS.gene75586:intron | 25.0% |
| ! | ATGTAATTGATATAAAGCCA+TGG | + | chr3.3:71493042-71493061 | MS.gene75586:CDS | 25.0% |
| ! | ATTTGATTAAGGAGCTTAAA+AGG | + | chr3.3:71493391-71493410 | MS.gene75586:intron | 25.0% |
| ! | CCTAAATGTACATTTGATTA+AGG | + | chr3.3:71493380-71493399 | MS.gene75586:intron | 25.0% |
| ! | CCTTAATCAAATGTACATTT+AGG | - | chr3.3:71493383-71493402 | None:intergenic | 25.0% |
| ! | CTAAGACATATATTTGAAGA+AGG | + | chr3.3:71494524-71494543 | MS.gene75586:CDS | 25.0% |
| ! | GGATTTCTTGAGAATAATTT+GGG | + | chr3.3:71493538-71493557 | MS.gene75586:intron | 25.0% |
| ! | GTACAAACAAAAAATAACAG+TGG | - | chr3.3:71493707-71493726 | None:intergenic | 25.0% |
| ! | TTTATTCTCACAAACATATG+AGG | - | chr3.3:71494937-71494956 | None:intergenic | 25.0% |
| ! | TTTGTTCAACAACTTCAAAT+TGG | + | chr3.3:71495317-71495336 | MS.gene75586:CDS | 25.0% |
| !! | AAAAATGTAACGATTTTGTC+TGG | + | chr3.3:71492465-71492484 | MS.gene75586:intron | 25.0% |
| !! | AAATATTGACGTAATTTTGC+AGG | + | chr3.3:71493907-71493926 | MS.gene75586:intron | 25.0% |
| !! | AGGTATTTAGCATTGAATTT+GGG | - | chr3.3:71494002-71494021 | None:intergenic | 25.0% |
| !! | ATTTTTGTATGGTTGTAACT+TGG | + | chr3.3:71494692-71494711 | MS.gene75586:intron | 25.0% |
| !! | GATTATGTTAAGCATTTTGA+CGG | + | chr3.3:71494752-71494771 | MS.gene75586:intron | 25.0% |
| !! | TACATGATGTTTTATCATTC+TGG | + | chr3.3:71491889-71491908 | MS.gene75586:intron | 25.0% |
| !! | TAGGTATTTAGCATTGAATT+TGG | - | chr3.3:71494003-71494022 | None:intergenic | 25.0% |
| !! | TAGTGAAAGTAATGTTTTGT+AGG | + | chr3.3:71495063-71495082 | MS.gene75586:intron | 25.0% |
| !! | TTTTCAAAATGACTGAATGA+AGG | + | chr3.3:71493613-71493632 | MS.gene75586:intron | 25.0% |
| !! | TTTTTGTATGGTTGTAACTT+GGG | + | chr3.3:71494693-71494712 | MS.gene75586:intron | 25.0% |
| !!! | AGTCATTTTGAAAACAACTT+AGG | - | chr3.3:71493607-71493626 | None:intergenic | 25.0% |
| !!! | GAAAGTGATTTGATTTTAGT+AGG | + | chr3.3:71492752-71492771 | MS.gene75586:intron | 25.0% |
| !!! | TAAAGTTTTGAAGAGGTTAT+AGG | + | chr3.3:71492676-71492695 | MS.gene75586:intron | 25.0% |
| !!! | TATTCCTTTTGTTTTATTGC+AGG | + | chr3.3:71491448-71491467 | MS.gene75586:intron | 25.0% |
| !!! | TTAATTCCTACTTTTTTGCT+TGG | + | chr3.3:71491125-71491144 | MS.gene75586:intron | 25.0% |
| !!! | TTTTGTTATTTGGTAAGGAA+GGG | - | chr3.3:71494321-71494340 | None:intergenic | 25.0% |
| !!! | TTTTTGTTATTTGGTAAGGA+AGG | - | chr3.3:71494322-71494341 | None:intergenic | 25.0% |
| AAAATAGCTTCTGTGATCAA+GGG | + | chr3.3:71493970-71493989 | MS.gene75586:CDS | 30.0% | |
| AAATGATAAGATTCCTTCAC+TGG | - | chr3.3:71495151-71495170 | None:intergenic | 30.0% | |
| AAGATGAAAAATAGCATACC+AGG | - | chr3.3:71492362-71492381 | None:intergenic | 30.0% | |
| AAGTTAATCAGCAAACTTGT+TGG | + | chr3.3:71492999-71493018 | MS.gene75586:CDS | 30.0% | |
| AATGCTAAATACCTATGACA+TGG | + | chr3.3:71494008-71494027 | MS.gene75586:CDS | 30.0% | |
| AATTGAGGATTTCAATCCAA+AGG | + | chr3.3:71492563-71492582 | MS.gene75586:CDS | 30.0% | |
| ACAGCATTAACAAAAAACAG+TGG | - | chr3.3:71493802-71493821 | None:intergenic | 30.0% | |
| ACTTCGCATCTATACAAAAT+AGG | + | chr3.3:71493236-71493255 | MS.gene75586:intron | 30.0% | |
| AGATCTCTGTATTCAATACA+AGG | + | chr3.3:71494134-71494153 | MS.gene75586:intron | 30.0% | |
| AGATGAACAGAACACAATAA+TGG | - | chr3.3:71494651-71494670 | None:intergenic | 30.0% | |
| ATCTTCAATACTGAAGCAAT+TGG | + | chr3.3:71492377-71492396 | MS.gene75586:CDS | 30.0% | |
| ATCTTGCGGAATATCTATAA+TGG | - | chr3.3:71491626-71491645 | None:intergenic | 30.0% | |
| ATTAAGGAGCTTAAAAGGAA+CGG | + | chr3.3:71493396-71493415 | MS.gene75586:intron | 30.0% | |
| ATTGCTACCATAAAGGAAAT+CGG | - | chr3.3:71491795-71491814 | None:intergenic | 30.0% | |
| ATTTCCTTTATGGTAGCAAT+AGG | + | chr3.3:71491795-71491814 | MS.gene75586:intron | 30.0% | |
| CAGCATTAACAAAAAACAGT+GGG | - | chr3.3:71493801-71493820 | None:intergenic | 30.0% | |
| CGGTATAAACATTCTGTTAT+GGG | - | chr3.3:71492599-71492618 | None:intergenic | 30.0% | |
| CTTCGCATCTATACAAAATA+GGG | + | chr3.3:71493237-71493256 | MS.gene75586:intron | 30.0% | |
| GGGATTTCTTGAGAATAATT+TGG | + | chr3.3:71493537-71493556 | MS.gene75586:intron | 30.0% | |
| GGTATAAACATTCTGTTATG+GGG | - | chr3.3:71492598-71492617 | None:intergenic | 30.0% | |
| TCGGTATAAACATTCTGTTA+TGG | - | chr3.3:71492600-71492619 | None:intergenic | 30.0% | |
| TCTATTCTGCTCACAAAATT+AGG | + | chr3.3:71491072-71491091 | MS.gene75586:CDS | 30.0% | |
| TCTTCAATACTGAAGCAATT+GGG | + | chr3.3:71492378-71492397 | MS.gene75586:CDS | 30.0% | |
| TGAAGTAGAGATTATAGTCA+TGG | - | chr3.3:71491228-71491247 | None:intergenic | 30.0% | |
| TTCAACAACTTCAAATTGGT+GGG | + | chr3.3:71495321-71495340 | MS.gene75586:CDS | 30.0% | |
| ! | AAGTAATGTTTTGTAGGAGA+CGG | + | chr3.3:71495069-71495088 | MS.gene75586:intron | 30.0% |
| ! | AATTTTGCAGGAATGAATAC+TGG | + | chr3.3:71493919-71493938 | MS.gene75586:intron | 30.0% |
| ! | AGGTATTAATTGCACAGTTT+TGG | + | chr3.3:71491468-71491487 | MS.gene75586:intron | 30.0% |
| ! | GGTATTTAGCATTGAATTTG+GGG | - | chr3.3:71494001-71494020 | None:intergenic | 30.0% |
| ! | GTTTAAAACCAATGAAATCC+AGG | - | chr3.3:71495019-71495038 | None:intergenic | 30.0% |
| ! | TAGCATTTGATAACTCTAGA+TGG | + | chr3.3:71493481-71493500 | MS.gene75586:intron | 30.0% |
| ! | TATTTTCCAGGCAAGATTAT+GGG | - | chr3.3:71493956-71493975 | None:intergenic | 30.0% |
| ! | TGTTTTCAAAATCTTTGGCA+TGG | + | chr3.3:71493575-71493594 | MS.gene75586:intron | 30.0% |
| ! | TTGATGACAAAGCGAATAAA+AGG | - | chr3.3:71494263-71494282 | None:intergenic | 30.0% |
| ! | TTTCTTTTTCCATGGGAATA+TGG | + | chr3.3:71493273-71493292 | MS.gene75586:intron | 30.0% |
| !! | ATTTTGACGGATGAACATTT+TGG | + | chr3.3:71494765-71494784 | MS.gene75586:intron | 30.0% |
| !! | GTTGATACTGCATATTTTGA+AGG | - | chr3.3:71491861-71491880 | None:intergenic | 30.0% |
| !! | TTTGTTATTTGGTAAGGAAG+GGG | - | chr3.3:71494320-71494339 | None:intergenic | 30.0% |
| !! | TTTTGACGGATGAACATTTT+GGG | + | chr3.3:71494766-71494785 | MS.gene75586:intron | 30.0% |
| !!! | AAGGTTTTTTCTGCTATACT+TGG | + | chr3.3:71495451-71495470 | MS.gene75586:CDS | 30.0% |
| !!! | TAAAACATGGAGTTTTGAAG+AGG | + | chr3.3:71492885-71492904 | MS.gene75586:intron | 30.0% |
| AAGTTGCTTGAGAAGTAACA+TGG | - | chr3.3:71492018-71492037 | None:intergenic | 35.0% | |
| AATAGCTACCTGGATTTCAT+TGG | + | chr3.3:71495008-71495027 | MS.gene75586:intron | 35.0% | |
| ACGACATTCATCATAATACG+AGG | + | chr3.3:71492842-71492861 | MS.gene75586:intron | 35.0% | |
| ACTAATATAGCCCCTTTGTT+TGG | - | chr3.3:71495361-71495380 | None:intergenic | 35.0% | |
| ATAAACCCATCGACGTTTAT+TGG | + | chr3.3:71494097-71494116 | MS.gene75586:intron | 35.0% | |
| ATCCAAGAATTGAACCAGAA+AGG | - | chr3.3:71491724-71491743 | None:intergenic | 35.0% | |
| ATCCACTGTAACATCCTTAT+TGG | + | chr3.3:71492206-71492225 | MS.gene75586:CDS | 35.0% | |
| ATGTGTAACATGCCAAACAA+AGG | + | chr3.3:71495346-71495365 | MS.gene75586:CDS | 35.0% | |
| CCTTTAGCAAAAATTTCCCA+AGG | - | chr3.3:71492334-71492353 | None:intergenic | 35.0% | |
| CTAAATGAAAGTAATCCCCT+TGG | + | chr3.3:71494482-71494501 | MS.gene75586:CDS | 35.0% | |
| CTAGTGACACAAATTAGCAA+AGG | - | chr3.3:71491321-71491340 | None:intergenic | 35.0% | |
| CTCAAGCAACTTGAAAATCT+AGG | + | chr3.3:71492026-71492045 | MS.gene75586:CDS | 35.0% | |
| CTTATTTCCTTCTGAGCTTT+CGG | - | chr3.3:71492069-71492088 | None:intergenic | 35.0% | |
| CTTCAATACTGAAGCAATTG+GGG | + | chr3.3:71492379-71492398 | MS.gene75586:CDS | 35.0% | |
| CTTGTAGGAATAGATATGAG+AGG | + | chr3.3:71492260-71492279 | MS.gene75586:CDS | 35.0% | |
| GAAAATAGCTTCTGTGATCA+AGG | + | chr3.3:71493969-71493988 | MS.gene75586:CDS | 35.0% | |
| GAAACTCCAAGCAAAAAAGT+AGG | - | chr3.3:71491134-71491153 | None:intergenic | 35.0% | |
| GATTACTTATCCTGACTCAT+GGG | - | chr3.3:71493685-71493704 | None:intergenic | 35.0% | |
| GTTCAACAACTTCAAATTGG+TGG | + | chr3.3:71495320-71495339 | MS.gene75586:CDS | 35.0% | |
| TAAAACCAAGATCTTCAGCA+GGG | - | chr3.3:71494571-71494590 | None:intergenic | 35.0% | |
| TACTGTTACGAAGTCATTGT+TGG | - | chr3.3:71492144-71492163 | None:intergenic | 35.0% | |
| TAGATATTCCGCAAGATTGA+TGG | + | chr3.3:71491629-71491648 | MS.gene75586:intron | 35.0% | |
| TAGCAAAAAGAATAGCTACC+TGG | + | chr3.3:71494998-71495017 | MS.gene75586:intron | 35.0% | |
| TCAAAGGCAGAAGTTATCAA+TGG | + | chr3.3:71490991-71491010 | MS.gene75586:CDS | 35.0% | |
| TCCAAGAATTGAACCAGAAA+GGG | - | chr3.3:71491723-71491742 | None:intergenic | 35.0% | |
| TCTGTTGAAGGACTTGATAA+TGG | + | chr3.3:71495244-71495263 | MS.gene75586:CDS | 35.0% | |
| TCTTCCTATTGCTACCATAA+AGG | - | chr3.3:71491802-71491821 | None:intergenic | 35.0% | |
| TGTGTAACATGCCAAACAAA+GGG | + | chr3.3:71495347-71495366 | MS.gene75586:CDS | 35.0% | |
| TTAAAAGGAACGGTAGAGTA+GGG | + | chr3.3:71493406-71493425 | MS.gene75586:intron | 35.0% | |
| TTCTGCTCACAAAATTAGGT+AGG | + | chr3.3:71491076-71491095 | MS.gene75586:intron | 35.0% | |
| TTGTACATACATACAGTTCC+AGG | + | chr3.3:71493721-71493740 | MS.gene75586:intron | 35.0% | |
| ! | AAATCCTCAATTGTTTGCTG+AGG | - | chr3.3:71492555-71492574 | None:intergenic | 35.0% |
| ! | AATCCTAGATTAGCCATTTC+AGG | - | chr3.3:71493774-71493793 | None:intergenic | 35.0% |
| ! | AGTTATCAATGGTGATGATG+CGG | + | chr3.3:71491002-71491021 | MS.gene75586:CDS | 35.0% |
| ! | ATCCTAGATTAGCCATTTCA+GGG | - | chr3.3:71493773-71493792 | None:intergenic | 35.0% |
| ! | ATTTTCTTAGCAAACGCCTT+GGG | + | chr3.3:71492315-71492334 | MS.gene75586:CDS | 35.0% |
| ! | CATTTGATAACTCTAGATGG+AGG | + | chr3.3:71493484-71493503 | MS.gene75586:intron | 35.0% |
| ! | CCTTGGGAAATTTTTGCTAA+AGG | + | chr3.3:71492331-71492350 | MS.gene75586:CDS | 35.0% |
| ! | CTATTTTCCAGGCAAGATTA+TGG | - | chr3.3:71493957-71493976 | None:intergenic | 35.0% |
| ! | TTTAGCTCGTGAAGCATTTA+AGG | + | chr3.3:71495168-71495187 | MS.gene75586:CDS | 35.0% |
| ! | TTTTTGCTAAAGGAGAATCC+TGG | + | chr3.3:71492341-71492360 | MS.gene75586:CDS | 35.0% |
| !! | AAACTTGTTGGTCAAGAGTT+TGG | + | chr3.3:71492795-71492814 | MS.gene75586:intron | 35.0% |
| !! | TTGGACAGCATTTTTGCTAT+AGG | + | chr3.3:71494434-71494453 | MS.gene75586:CDS | 35.0% |
| !! | TTTGACGGATGAACATTTTG+GGG | + | chr3.3:71494767-71494786 | MS.gene75586:intron | 35.0% |
| !!! | CTCTCAAAGTGTGTGTTTTT+TGG | + | chr3.3:71495212-71495231 | MS.gene75586:CDS | 35.0% |
| !!! | TGGAGTTTTGAAGAGGTTAT+AGG | + | chr3.3:71492892-71492911 | MS.gene75586:intron | 35.0% |
| !!! | TTTTGTTTTTCCCATGAGTC+AGG | + | chr3.3:71493672-71493691 | MS.gene75586:intron | 35.0% |
| AACATCCTTATTGGTGCAGA+TGG | + | chr3.3:71492215-71492234 | MS.gene75586:CDS | 40.0% | |
| AACATGACACCATATTCCCA+TGG | - | chr3.3:71493285-71493304 | None:intergenic | 40.0% | |
| AACTCATGGCTGTTGAACTT+AGG | + | chr3.3:71494800-71494819 | MS.gene75586:intron | 40.0% | |
| AACTTCCTCCATAAGTCTAC+CGG | - | chr3.3:71491686-71491705 | None:intergenic | 40.0% | |
| ACCTTTGGATCTCTTCAACA+AGG | - | chr3.3:71491655-71491674 | None:intergenic | 40.0% | |
| ACGTCTGCATAATTCTTCCA+GGG | - | chr3.3:71495289-71495308 | None:intergenic | 40.0% | |
| ACTTCAGCATGCATAATCCA+TGG | - | chr3.3:71493062-71493081 | None:intergenic | 40.0% | |
| AGACACCAATAAACGTCGAT+GGG | - | chr3.3:71494105-71494124 | None:intergenic | 40.0% | |
| AGGAATGAATACTGGCATTC+AGG | + | chr3.3:71493927-71493946 | MS.gene75586:intron | 40.0% | |
| AGTACTGTGAGAAAGCTTGT+AGG | + | chr3.3:71492245-71492264 | MS.gene75586:CDS | 40.0% | |
| ATAGAAAGAACAAGACCCAC+AGG | - | chr3.3:71491057-71491076 | None:intergenic | 40.0% | |
| CACCAATAAGGATGTTACAG+TGG | - | chr3.3:71492211-71492230 | None:intergenic | 40.0% | |
| CATCACCGGCAAGTAATATT+CGG | - | chr3.3:71493112-71493131 | None:intergenic | 40.0% | |
| CGACAAACATATCCCATACA+CGG | - | chr3.3:71493329-71493348 | None:intergenic | 40.0% | |
| CTAAAACCAAGATCTTCAGC+AGG | - | chr3.3:71494572-71494591 | None:intergenic | 40.0% | |
| CTTAAAAGGAACGGTAGAGT+AGG | + | chr3.3:71493405-71493424 | MS.gene75586:intron | 40.0% | |
| CTTCATCAACAATCGATCCA+TGG | + | chr3.3:71491528-71491547 | MS.gene75586:CDS | 40.0% | |
| GAGAATAAACGCATTAAGCG+AGG | + | chr3.3:71494948-71494967 | MS.gene75586:CDS | 40.0% | |
| GCAAACATCTACTATCTGCA+TGG | - | chr3.3:71493185-71493204 | None:intergenic | 40.0% | |
| GCTGAGAGGTTTATATGTTG+TGG | + | chr3.3:71493083-71493102 | MS.gene75586:CDS | 40.0% | |
| GGATTACTTATCCTGACTCA+TGG | - | chr3.3:71493686-71493705 | None:intergenic | 40.0% | |
| GTATATTGCACTTCCCTTTC+TGG | + | chr3.3:71491707-71491726 | MS.gene75586:CDS | 40.0% | |
| GTCGTTCTTTCTCTGAACAT+GGG | + | chr3.3:71493345-71493364 | MS.gene75586:intron | 40.0% | |
| GTGTAACATGCCAAACAAAG+GGG | + | chr3.3:71495348-71495367 | MS.gene75586:CDS | 40.0% | |
| GTTGAACTTAGGTACCTACA+AGG | + | chr3.3:71494811-71494830 | MS.gene75586:intron | 40.0% | |
| TAAAAGGAACGGTAGAGTAG+GGG | + | chr3.3:71493407-71493426 | MS.gene75586:intron | 40.0% | |
| TAGACACCAATAAACGTCGA+TGG | - | chr3.3:71494106-71494125 | None:intergenic | 40.0% | |
| TAGATGGAGGCTGTTGTTAA+TGG | + | chr3.3:71493497-71493516 | MS.gene75586:intron | 40.0% | |
| TATGGGGAAGATGATACCTT+TGG | - | chr3.3:71492582-71492601 | None:intergenic | 40.0% | |
| TGGTTCAATTCTTGGATCTG+TGG | + | chr3.3:71491727-71491746 | MS.gene75586:CDS | 40.0% | |
| TGTCGTTCTTTCTCTGAACA+TGG | + | chr3.3:71493344-71493363 | MS.gene75586:intron | 40.0% | |
| TTCAACAGCCATGAGTTAGA+CGG | - | chr3.3:71494797-71494816 | None:intergenic | 40.0% | |
| TTCTTGTTGCTCATGATCTC+AGG | + | chr3.3:71492402-71492421 | MS.gene75586:CDS | 40.0% | |
| ! | CAAGGCGTTTGCTAAGAAAA+TGG | - | chr3.3:71492316-71492335 | None:intergenic | 40.0% |
| ! | CATTTTCTTAGCAAACGCCT+TGG | + | chr3.3:71492314-71492333 | MS.gene75586:CDS | 40.0% |
| ! | GTGCAATTTCAAGACTTGCT+GGG | + | chr3.3:71495407-71495426 | MS.gene75586:CDS | 40.0% |
| ! | GTTTGCTGAGGTGGATAAAA+CGG | - | chr3.3:71492543-71492562 | None:intergenic | 40.0% |
| ! | TAACGATTTTGTCTGGCAAC+TGG | + | chr3.3:71492472-71492491 | MS.gene75586:intron | 40.0% |
| ! | TAATGGGAAGCGTGTAGAAA+AGG | + | chr3.3:71492181-71492200 | MS.gene75586:CDS | 40.0% |
| ! | TTGTTGATGAAGTGTGCTTG+TGG | - | chr3.3:71491520-71491539 | None:intergenic | 40.0% |
| !! | AAAAGTGCTCTTAACCTCCA+TGG | - | chr3.3:71491548-71491567 | None:intergenic | 40.0% |
| !! | CTGCTGAAGATCTTGGTTTT+AGG | + | chr3.3:71494570-71494589 | MS.gene75586:CDS | 40.0% |
| !! | GAAGTCATTGTTGGTGTCAA+TGG | - | chr3.3:71492135-71492154 | None:intergenic | 40.0% |
| !! | GATCACAGAAGCTATTTTCC+AGG | - | chr3.3:71493968-71493987 | None:intergenic | 40.0% |
| !! | GTAAAGAAGCATTATCACCC+TGG | + | chr3.3:71495269-71495288 | MS.gene75586:CDS | 40.0% |
| !! | TCCCTTTCTGGTTCAATTCT+TGG | + | chr3.3:71491719-71491738 | MS.gene75586:CDS | 40.0% |
| !! | TGCAATTTCAAGACTTGCTG+GGG | + | chr3.3:71495408-71495427 | MS.gene75586:CDS | 40.0% |
| !! | TGGGAATATGGTGTCATGTT+TGG | + | chr3.3:71493285-71493304 | MS.gene75586:intron | 40.0% |
| !! | TGGTCTACTGATTCTGTTGA+AGG | + | chr3.3:71495232-71495251 | MS.gene75586:CDS | 40.0% |
| !! | TTGACGGATGAACATTTTGG+GGG | + | chr3.3:71494768-71494787 | MS.gene75586:intron | 40.0% |
| !!! | CACAGTTTTGGAGAGAAACA+AGG | + | chr3.3:71491480-71491499 | MS.gene75586:CDS | 40.0% |
| !!! | GCAAGGAGAATTTGTTTTGC+AGG | + | chr3.3:71492424-71492443 | MS.gene75586:CDS | 40.0% |
| AAATCGATGAGCAGCATCAC+CGG | - | chr3.3:71493126-71493145 | None:intergenic | 45.0% | |
| AACTTACCAAATCCACCAGC+AGG | - | chr3.3:71493152-71493171 | None:intergenic | 45.0% | |
| AAGTCTTGAAATTGCACGCC+AGG | - | chr3.3:71495404-71495423 | None:intergenic | 45.0% | |
| ACTGCGTCGTCTGTCAATAA+TGG | + | chr3.3:71492164-71492183 | MS.gene75586:CDS | 45.0% | |
| AGCCAACCTTGAAGATCCAA+GGG | - | chr3.3:71494501-71494520 | None:intergenic | 45.0% | |
| AGCTTTCGGATGCACATGTT+TGG | - | chr3.3:71492055-71492074 | None:intergenic | 45.0% | |
| ATACATACAGTTCCAGGCCA+GGG | + | chr3.3:71493727-71493746 | MS.gene75586:intron | 45.0% | |
| CAACAAGGCCATCAATCTTG+CGG | - | chr3.3:71491640-71491659 | None:intergenic | 45.0% | |
| CATCAACAATCGATCCATGG+AGG | + | chr3.3:71491531-71491550 | MS.gene75586:CDS | 45.0% | |
| CGTGCAATTTCAAGACTTGC+TGG | + | chr3.3:71495406-71495425 | MS.gene75586:CDS | 45.0% | |
| CTCCCTGAAATGGCTAATCT+AGG | + | chr3.3:71493768-71493787 | MS.gene75586:intron | 45.0% | |
| CTCTCAACATCACTACTCTC+TGG | - | chr3.3:71494847-71494866 | None:intergenic | 45.0% | |
| CTGCGTCGTCTGTCAATAAT+GGG | + | chr3.3:71492165-71492184 | MS.gene75586:CDS | 45.0% | |
| GACCTGATGAACATATTGCC+TGG | + | chr3.3:71495383-71495402 | MS.gene75586:CDS | 45.0% | |
| GACGTCTGCATAATTCTTCC+AGG | - | chr3.3:71495290-71495309 | None:intergenic | 45.0% | |
| GACTACAGAATAGCACCTTG+AGG | - | chr3.3:71491764-71491783 | None:intergenic | 45.0% | |
| GATCCAACTGTTGCAAACAC+AGG | + | chr3.3:71494211-71494230 | MS.gene75586:CDS | 45.0% | |
| GCAAAGCAGAGGTTTCTCAA+AGG | + | chr3.3:71490975-71490994 | MS.gene75586:CDS | 45.0% | |
| GGAGGCTGTTGTTAATGGTT+TGG | + | chr3.3:71493502-71493521 | MS.gene75586:intron | 45.0% | |
| GGCAACCGAATATTACTTGC+CGG | + | chr3.3:71493104-71493123 | MS.gene75586:CDS | 45.0% | |
| GTAATCCCCTTGGATCTTCA+AGG | + | chr3.3:71494492-71494511 | MS.gene75586:CDS | 45.0% | |
| GTACCTGTGTTTGCAACAGT+TGG | - | chr3.3:71494217-71494236 | None:intergenic | 45.0% | |
| TAGCCAACCTTGAAGATCCA+AGG | - | chr3.3:71494502-71494521 | None:intergenic | 45.0% | |
| TCAACAGCCATGAGTTAGAC+GGG | - | chr3.3:71494796-71494815 | None:intergenic | 45.0% | |
| TCCACCTCAGCAAACAATTG+AGG | + | chr3.3:71492548-71492567 | MS.gene75586:CDS | 45.0% | |
| TCTCATCATAGCACCAGTGA+AGG | + | chr3.3:71495135-71495154 | MS.gene75586:CDS | 45.0% | |
| ! | ACGTGAGCCGATTTCCTTTA+TGG | + | chr3.3:71491785-71491804 | MS.gene75586:intron | 45.0% |
| ! | AGAAGTGTGCCACAGAGATT+GGG | - | chr3.3:71491980-71491999 | None:intergenic | 45.0% |
| ! | AGCTCGTGAAGCATTTAAGG+TGG | + | chr3.3:71495171-71495190 | MS.gene75586:CDS | 45.0% |
| ! | ATAAAGGAAATCGGCTCACG+TGG | - | chr3.3:71491786-71491805 | None:intergenic | 45.0% |
| ! | CTAGATTAGCCATTTCAGGG+AGG | - | chr3.3:71493770-71493789 | None:intergenic | 45.0% |
| ! | GCCTTGTTGAAGAGATCCAA+AGG | + | chr3.3:71491651-71491670 | MS.gene75586:CDS | 45.0% |
| ! | GTTGGTTCCATCTTACCATC+CGG | + | chr3.3:71494395-71494414 | MS.gene75586:CDS | 45.0% |
| ! | TCCTCAATTGTTTGCTGAGG+TGG | - | chr3.3:71492552-71492571 | None:intergenic | 45.0% |
| ! | TGAAGCATTTAAGGTGGCTG+AGG | + | chr3.3:71495177-71495196 | MS.gene75586:CDS | 45.0% |
| !! | AATGGTTTGGTGCTTCGACT+AGG | + | chr3.3:71493515-71493534 | MS.gene75586:intron | 45.0% |
| !! | ATGGTTTGGTGCTTCGACTA+GGG | + | chr3.3:71493516-71493535 | MS.gene75586:intron | 45.0% |
| !! | GGTTTCGAGTTTCCGTGTAT+GGG | + | chr3.3:71493314-71493333 | MS.gene75586:intron | 45.0% |
| !! | TGGTGTCATGTTTGGAGAGT+CGG | + | chr3.3:71493293-71493312 | MS.gene75586:intron | 45.0% |
| AACCACCGGTAGACTTATGG+AGG | + | chr3.3:71491678-71491697 | MS.gene75586:CDS | 50.0% | |
| AAGTGTGGCAGGAACAGACA+TGG | - | chr3.3:71494185-71494204 | None:intergenic | 50.0% | |
| AGGATGCCCATAATCTTGCC+TGG | + | chr3.3:71493947-71493966 | MS.gene75586:CDS | 50.0% | |
| AGTTGGATCGAGACCAAGTG+TGG | - | chr3.3:71494200-71494219 | None:intergenic | 50.0% | |
| ATATGAGGCAGTCTGCATCC+TGG | - | chr3.3:71494922-71494941 | None:intergenic | 50.0% | |
| ATGTCTGTTCCTGCCACACT+TGG | + | chr3.3:71494184-71494203 | MS.gene75586:CDS | 50.0% | |
| CAGCAGGGAACTGAAGTTGA+AGG | - | chr3.3:71494556-71494575 | None:intergenic | 50.0% | |
| CAGTTCCCTGCTGAAGATCT+TGG | + | chr3.3:71494563-71494582 | MS.gene75586:CDS | 50.0% | |
| CATACATACAGTTCCAGGCC+AGG | + | chr3.3:71493726-71493745 | MS.gene75586:intron | 50.0% | |
| CCTGCACCAATGATCAGAAC+CGG | - | chr3.3:71491033-71491052 | None:intergenic | 50.0% | |
| CGCCAGGCAATATGTTCATC+AGG | - | chr3.3:71495388-71495407 | None:intergenic | 50.0% | |
| CTCAACCACCGGTAGACTTA+TGG | + | chr3.3:71491675-71491694 | MS.gene75586:CDS | 50.0% | |
| CTGCAATCCGGATGGTAAGA+TGG | - | chr3.3:71494405-71494424 | None:intergenic | 50.0% | |
| CTGCTCCATCTGCACCAATA+AGG | - | chr3.3:71492223-71492242 | None:intergenic | 50.0% | |
| CTGGCACAATTGCACCTTGT+AGG | - | chr3.3:71494828-71494847 | None:intergenic | 50.0% | |
| CTTATTGGTGCAGATGGAGC+AGG | + | chr3.3:71492221-71492240 | MS.gene75586:CDS | 50.0% | |
| GATCCAAAGGTCTCAACCAC+CGG | + | chr3.3:71491664-71491683 | MS.gene75586:CDS | 50.0% | |
| GCCAACCTTGAAGATCCAAG+GGG | - | chr3.3:71494500-71494519 | None:intergenic | 50.0% | |
| GTGGATCACATACAGCCTCA+AGG | + | chr3.3:71491746-71491765 | MS.gene75586:CDS | 50.0% | |
| GTTGCTCATGATCTCAGGCA+AGG | + | chr3.3:71492407-71492426 | MS.gene75586:CDS | 50.0% | |
| TACATACAGTTCCAGGCCAG+GGG | + | chr3.3:71493728-71493747 | MS.gene75586:intron | 50.0% | |
| TATACCCCTTCAGCACAACC+AGG | + | chr3.3:71494901-71494920 | MS.gene75586:CDS | 50.0% | |
| TCCCCTTGGATCTTCAAGGT+TGG | + | chr3.3:71494496-71494515 | MS.gene75586:CDS | 50.0% | |
| TCCTAGGGCGGAAATGGAAA+AGG | + | chr3.3:71495432-71495451 | MS.gene75586:CDS | 50.0% | |
| TCTACGCACGATCTTGTGTC+TGG | + | chr3.3:71495094-71495113 | MS.gene75586:CDS | 50.0% | |
| TCTTACCATCCGGATTGCAG+AGG | + | chr3.3:71494405-71494424 | MS.gene75586:CDS | 50.0% | |
| TGCATCCTGGTTGTGCTGAA+GGG | - | chr3.3:71494909-71494928 | None:intergenic | 50.0% | |
| TGCATGCTGAAGTTGCTGAG+AGG | + | chr3.3:71493069-71493088 | MS.gene75586:CDS | 50.0% | |
| TGGTCTACGCTCCATGTCAT+AGG | - | chr3.3:71494022-71494041 | None:intergenic | 50.0% | |
| TGTGCATCCGAAAGCTCAGA+AGG | + | chr3.3:71492059-71492078 | MS.gene75586:CDS | 50.0% | |
| TGTTGTCAGCCCAATCTCTG+TGG | + | chr3.3:71491968-71491987 | MS.gene75586:CDS | 50.0% | |
| TTACCAAATCCACCAGCAGG+TGG | - | chr3.3:71493149-71493168 | None:intergenic | 50.0% | |
| TTCCTCCATAAGTCTACCGG+TGG | - | chr3.3:71491683-71491702 | None:intergenic | 50.0% | |
| ! | ACCTTTTCCATTTCCGCCCT+AGG | - | chr3.3:71495436-71495455 | None:intergenic | 50.0% |
| ! | CAAAGCTAGCCTCTGCAATC+CGG | - | chr3.3:71494417-71494436 | None:intergenic | 50.0% |
| ! | CGGTTCTGATCATTGGTGCA+GGG | + | chr3.3:71491031-71491050 | MS.gene75586:CDS | 50.0% |
| ! | GAGAAGTGTGCCACAGAGAT+TGG | - | chr3.3:71491981-71492000 | None:intergenic | 50.0% |
| ! | GTGCTTCCGGTTCTGATCAT+TGG | + | chr3.3:71491024-71491043 | MS.gene75586:CDS | 50.0% |
| !! | AAGACTTGCTGGGGATCCTA+GGG | + | chr3.3:71495417-71495436 | MS.gene75586:CDS | 50.0% |
| !! | CGGTTTCGAGTTTCCGTGTA+TGG | + | chr3.3:71493313-71493332 | MS.gene75586:intron | 50.0% |
| !! | TGGTTTGGTGCTTCGACTAG+GGG | + | chr3.3:71493517-71493536 | MS.gene75586:intron | 50.0% |
| !! | TTTCCACCTGCTGGTGGATT+TGG | + | chr3.3:71493143-71493162 | MS.gene75586:CDS | 50.0% |
| AAGGCGCACTCGCATTAGTG+TGG | + | chr3.3:71493632-71493651 | MS.gene75586:intron | 55.0% | |
| AGTCCTCCACAAGTACCCAC+AGG | + | chr3.3:71494865-71494884 | MS.gene75586:CDS | 55.0% | |
| ATCATTGGTGCAGGGCCTGT+GGG | + | chr3.3:71491039-71491058 | MS.gene75586:CDS | 55.0% | |
| CTACCGGTGGTTGAGACCTT+TGG | - | chr3.3:71491670-71491689 | None:intergenic | 55.0% | |
| CTGCATCCTGGTTGTGCTGA+AGG | - | chr3.3:71494910-71494929 | None:intergenic | 55.0% | |
| GCATCCTGGTTGTGCTGAAG+GGG | - | chr3.3:71494908-71494927 | None:intergenic | 55.0% | |
| GGGTAAAGGCCTCCCTGAAA+TGG | + | chr3.3:71493758-71493777 | MS.gene75586:intron | 55.0% | |
| ! | CCGGTTCTGATCATTGGTGC+AGG | + | chr3.3:71491030-71491049 | MS.gene75586:CDS | 55.0% |
| ! | TGGTGATGATGCGGTGCTTC+CGG | + | chr3.3:71491011-71491030 | MS.gene75586:CDS | 55.0% |
| !! | CAAGACTTGCTGGGGATCCT+AGG | + | chr3.3:71495416-71495435 | MS.gene75586:CDS | 55.0% |
| !! | CATCGATTTCCACCTGCTGG+TGG | + | chr3.3:71493137-71493156 | MS.gene75586:CDS | 55.0% |
| !! | CGGATTGCAGAGGCTAGCTT+TGG | + | chr3.3:71494415-71494434 | MS.gene75586:CDS | 55.0% |
| !! | GCTCATCGATTTCCACCTGC+TGG | + | chr3.3:71493134-71493153 | MS.gene75586:CDS | 55.0% |
| AAGTACCCACAGGTCGTCGC+AGG | + | chr3.3:71494875-71494894 | MS.gene75586:CDS | 60.0% | |
| AGTACCCACAGGTCGTCGCA+GGG | + | chr3.3:71494876-71494895 | MS.gene75586:CDS | 60.0% | |
| ATAGTCCCTGCGACGACCTG+TGG | - | chr3.3:71494884-71494903 | None:intergenic | 60.0% | |
| CGACCTGTGGGTACTTGTGG+AGG | - | chr3.3:71494871-71494890 | None:intergenic | 60.0% | |
| CGACGACCTGTGGGTACTTG+TGG | - | chr3.3:71494874-71494893 | None:intergenic | 60.0% | |
| GATCATTGGTGCAGGGCCTG+TGG | + | chr3.3:71491038-71491057 | MS.gene75586:CDS | 60.0% | |
| GGATCGAGACCAAGTGTGGC+AGG | - | chr3.3:71494196-71494215 | None:intergenic | 60.0% | |
| TAGTCCCTGCGACGACCTGT+GGG | - | chr3.3:71494883-71494902 | None:intergenic | 60.0% | |
| TGGGGATCCTAGGGCGGAAA+TGG | + | chr3.3:71495426-71495445 | MS.gene75586:CDS | 60.0% | |
| ! | ACTTGCTGGGGATCCTAGGG+CGG | + | chr3.3:71495420-71495439 | MS.gene75586:CDS | 60.0% |
| ! | GCTAGCCTCTGCAATCCGGA+TGG | - | chr3.3:71494413-71494432 | None:intergenic | 60.0% |
| CCTTTACCCACCACTGCCCC+TGG | - | chr3.3:71493747-71493766 | None:intergenic | 65.0% | |
| !! | CCAGGGGCAGTGGTGGGTAA+AGG | + | chr3.3:71493744-71493763 | MS.gene75586:intron | 65.0% |
| !! | GGGGGCACCCGTCTAACTCA+TGG | + | chr3.3:71494786-71494805 | MS.gene75586:intron | 65.0% |
| CAGTTCCAGGCCAGGGGCAG+TGG | + | chr3.3:71493734-71493753 | MS.gene75586:intron | 70.0% | |
| TCCAGGCCAGGGGCAGTGGT+GGG | + | chr3.3:71493738-71493757 | MS.gene75586:intron | 70.0% | |
| TTCCAGGCCAGGGGCAGTGG+TGG | + | chr3.3:71493737-71493756 | MS.gene75586:intron | 70.0% | |
| ACCCACCACTGCCCCTGGCC+TGG | - | chr3.3:71493742-71493761 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 71490973 | 71495483 | 71490973 | ID=MS.gene75586 |
| chr3.3 | mRNA | 71490973 | 71495483 | 71490973 | ID=MS.gene75586.t1;Parent=MS.gene75586 |
| chr3.3 | exon | 71490973 | 71491093 | 71490973 | ID=MS.gene75586.t1.exon1;Parent=MS.gene75586.t1 |
| chr3.3 | CDS | 71490973 | 71491093 | 71490973 | ID=cds.MS.gene75586.t1;Parent=MS.gene75586.t1 |
| chr3.3 | exon | 71491470 | 71491552 | 71491470 | ID=MS.gene75586.t1.exon2;Parent=MS.gene75586.t1 |
| chr3.3 | CDS | 71491470 | 71491552 | 71491470 | ID=cds.MS.gene75586.t1;Parent=MS.gene75586.t1 |
| chr3.3 | exon | 71491632 | 71491767 | 71491632 | ID=MS.gene75586.t1.exon3;Parent=MS.gene75586.t1 |
| chr3.3 | CDS | 71491632 | 71491767 | 71491632 | ID=cds.MS.gene75586.t1;Parent=MS.gene75586.t1 |
| chr3.3 | exon | 71491958 | 71492445 | 71491958 | ID=MS.gene75586.t1.exon4;Parent=MS.gene75586.t1 |
| chr3.3 | CDS | 71491958 | 71492445 | 71491958 | ID=cds.MS.gene75586.t1;Parent=MS.gene75586.t1 |
| chr3.3 | exon | 71492537 | 71492584 | 71492537 | ID=MS.gene75586.t1.exon5;Parent=MS.gene75586.t1 |
| chr3.3 | CDS | 71492537 | 71492584 | 71492537 | ID=cds.MS.gene75586.t1;Parent=MS.gene75586.t1 |
| chr3.3 | exon | 71492990 | 71493164 | 71492990 | ID=MS.gene75586.t1.exon6;Parent=MS.gene75586.t1 |
| chr3.3 | CDS | 71492990 | 71493164 | 71492990 | ID=cds.MS.gene75586.t1;Parent=MS.gene75586.t1 |
| chr3.3 | exon | 71493929 | 71494041 | 71493929 | ID=MS.gene75586.t1.exon7;Parent=MS.gene75586.t1 |
| chr3.3 | CDS | 71493929 | 71494041 | 71493929 | ID=cds.MS.gene75586.t1;Parent=MS.gene75586.t1 |
| chr3.3 | exon | 71494136 | 71494232 | 71494136 | ID=MS.gene75586.t1.exon8;Parent=MS.gene75586.t1 |
| chr3.3 | CDS | 71494136 | 71494232 | 71494136 | ID=cds.MS.gene75586.t1;Parent=MS.gene75586.t1 |
| chr3.3 | exon | 71494372 | 71494591 | 71494372 | ID=MS.gene75586.t1.exon9;Parent=MS.gene75586.t1 |
| chr3.3 | CDS | 71494372 | 71494591 | 71494372 | ID=cds.MS.gene75586.t1;Parent=MS.gene75586.t1 |
| chr3.3 | exon | 71494822 | 71494969 | 71494822 | ID=MS.gene75586.t1.exon10;Parent=MS.gene75586.t1 |
| chr3.3 | CDS | 71494822 | 71494969 | 71494822 | ID=cds.MS.gene75586.t1;Parent=MS.gene75586.t1 |
| chr3.3 | exon | 71495085 | 71495483 | 71495085 | ID=MS.gene75586.t1.exon11;Parent=MS.gene75586.t1 |
| chr3.3 | CDS | 71495085 | 71495483 | 71495085 | ID=cds.MS.gene75586.t1;Parent=MS.gene75586.t1 |
| Gene Sequence |
| Protein sequence |
