AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75882

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75882.t1 MTR_2g048390 98.901 455 4 1 1 454 1 455 0.0 929
MS.gene75882.t1 MTR_2g018750 54.631 637 256 10 1 634 1 607 0.0 676
MS.gene75882.t1 MTR_1g094850 53.821 602 250 11 1 597 1 579 0.0 642
MS.gene75882.t1 MTR_1g064360 52.531 573 235 7 1 570 1 539 0.0 600
MS.gene75882.t1 MTR_2g084595 45.412 643 322 12 9 636 6 634 0.0 569
MS.gene75882.t1 MTR_8g078900 46.526 662 289 14 8 617 2 650 0.0 560
MS.gene75882.t1 MTR_8g078900 45.498 633 280 14 37 617 1 620 2.11e-177 518
MS.gene75882.t1 MTR_8g078900 46.496 585 267 13 66 617 39 610 6.36e-170 499
MS.gene75882.t1 MTR_4g093850 41.786 627 321 10 1 593 19 635 1.64e-156 466
MS.gene75882.t1 MTR_2g009340 37.838 666 365 11 5 631 23 678 3.75e-149 448
MS.gene75882.t1 MTR_2g084595 47.982 446 224 5 9 452 6 445 5.29e-148 436
MS.gene75882.t1 MTR_8g078900 47.046 474 210 9 8 452 2 463 2.33e-136 407
MS.gene75882.t1 MTR_5g015790 42.537 536 271 11 1 527 1 508 3.52e-128 392
MS.gene75882.t1 MTR_4g022330 39.049 589 305 9 15 584 23 576 4.16e-128 391
MS.gene75882.t1 MTR_5g016060 38.069 549 312 10 15 561 29 551 2.99e-124 382
MS.gene75882.t1 MTR_2g048375 99.441 179 1 0 469 647 1 179 5.49e-123 362
MS.gene75882.t1 MTR_7g108290 38.581 578 308 12 15 573 26 575 1.75e-122 379
MS.gene75882.t1 MTR_1g088885 38.276 580 304 12 15 573 26 572 4.25e-122 376
MS.gene75882.t1 MTR_7g073980 39.344 549 296 10 29 569 36 555 1.91e-121 375
MS.gene75882.t1 MTR_5g032780 39.925 536 280 9 1 507 1 523 1.47e-116 362
MS.gene75882.t1 MTR_1g106430 39.042 543 298 9 1 535 1 518 5.91e-116 360
MS.gene75882.t1 MTR_4g093850 42.380 479 242 8 1 452 19 490 5.95e-116 357
MS.gene75882.t1 MTR_1g014070 35.809 606 351 11 1 594 1 580 1.00e-114 357
MS.gene75882.t1 MTR_8g078900 47.103 397 188 8 66 452 39 423 1.98e-113 347
MS.gene75882.t1 MTR_8g090220 32.385 633 342 11 10 607 37 618 7.08e-113 353
MS.gene75882.t1 MTR_3g062540 36.239 585 313 12 12 594 11 537 5.57e-112 348
MS.gene75882.t1 MTR_4g095430 35.145 552 328 9 15 562 2 527 5.75e-112 349
MS.gene75882.t1 MTR_8g090220 35.977 517 268 8 10 504 37 512 5.71e-108 336
MS.gene75882.t1 MTR_5g075640 33.901 587 332 9 12 594 12 546 1.81e-105 332
MS.gene75882.t1 MTR_8g069330 37.963 540 272 9 1 518 1 499 2.27e-101 321
MS.gene75882.t1 MTR_4g134210 36.508 504 286 10 1 501 1 473 4.42e-100 318
MS.gene75882.t1 MTR_3g062540 35.390 551 297 11 46 594 2 495 2.53e-99 314
MS.gene75882.t1 MTR_5g016060 37.744 461 260 9 103 561 2 437 3.88e-94 300
MS.gene75882.t1 MTR_5g075640 33.273 553 314 8 46 594 2 503 4.54e-93 298
MS.gene75882.t1 MTR_1g082690 32.738 504 279 8 10 510 42 488 1.13e-91 295
MS.gene75882.t1 MTR_2g027410 34.263 502 290 10 1 501 1 463 5.43e-83 272
MS.gene75882.t1 MTR_2g027410 35.431 429 238 9 74 501 1 391 7.79e-69 233
MS.gene75882.t1 MTR_4g011530 34.031 382 218 5 207 580 38 393 3.32e-66 224
MS.gene75882.t1 MTR_4g045767 30.088 565 335 13 35 582 14 535 5.55e-61 213
MS.gene75882.t1 MTR_2g102730 33.679 386 221 6 215 594 24 380 5.86e-61 209
MS.gene75882.t1 MTR_1g035720 27.739 566 330 15 36 576 14 525 4.12e-55 196
MS.gene75882.t1 MTR_4g074190 30.137 511 299 13 69 562 3 472 5.94e-51 184
MS.gene75882.t1 MTR_4g074190 30.097 515 302 13 65 562 45 518 7.40e-51 185
MS.gene75882.t1 MTR_4g074190 30.370 405 231 11 65 452 45 415 1.77e-37 145
MS.gene75882.t1 MTR_2g010890 26.551 403 245 8 93 489 1 358 8.54e-31 126
MS.gene75882.t1 MTR_1g105870 30.583 206 123 4 30 234 35 221 1.33e-27 112
MS.gene75882.t1 MTR_5g015540 30.667 150 93 4 19 167 43 182 2.02e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75882.t1 AT1G30440 74.169 662 145 10 1 636 1 662 0.0 970
MS.gene75882.t1 AT5G03250 55.340 618 232 14 1 606 1 586 0.0 661
MS.gene75882.t1 AT5G13600 52.769 614 248 13 1 607 1 579 0.0 581
MS.gene75882.t1 AT3G44820 48.976 586 272 8 8 573 5 583 0.0 566
MS.gene75882.t1 AT5G66560 44.214 674 274 16 16 609 9 660 0.0 530
MS.gene75882.t1 AT5G03250 52.767 506 196 13 112 606 1 474 9.87e-175 506
MS.gene75882.t1 AT5G66560 43.252 652 270 15 37 609 1 631 6.39e-167 492
MS.gene75882.t1 AT5G66560 46.021 578 253 14 69 609 66 621 9.56e-164 483
MS.gene75882.t1 AT3G50840 42.237 599 297 12 16 609 5 559 4.59e-154 456
MS.gene75882.t1 AT3G50840 40.741 567 288 11 47 609 1 523 3.23e-136 409
MS.gene75882.t1 AT3G50840 40.741 567 288 11 47 609 1 523 3.23e-136 409
MS.gene75882.t1 AT5G48800 39.899 594 297 11 15 594 30 577 7.68e-128 390
MS.gene75882.t1 AT5G66560 43.902 492 200 12 16 452 9 479 9.70e-123 373
MS.gene75882.t1 AT3G08570 37.983 595 329 11 29 611 37 603 1.91e-116 361
MS.gene75882.t1 AT3G08660 37.069 580 297 13 24 594 32 552 8.05e-116 358
MS.gene75882.t1 AT5G10250 35.526 608 313 11 10 593 34 586 3.11e-115 358
MS.gene75882.t1 AT5G67385 37.251 502 284 6 10 510 10 481 4.04e-115 357
MS.gene75882.t1 AT1G03010 37.037 594 322 14 5 573 16 582 1.72e-113 354
MS.gene75882.t1 AT1G03010 37.565 575 308 13 24 573 7 555 6.24e-113 352
MS.gene75882.t1 AT1G03010 37.565 575 308 13 24 573 33 581 1.62e-112 352
MS.gene75882.t1 AT5G10250 35.284 598 313 12 10 593 34 571 1.75e-109 343
MS.gene75882.t1 AT1G67900 39.579 523 278 8 1 501 1 507 5.13e-108 340
MS.gene75882.t1 AT1G67900 39.579 523 278 8 1 501 1 507 5.13e-108 340
MS.gene75882.t1 AT1G67900 39.579 523 278 8 1 501 1 507 5.13e-108 340
MS.gene75882.t1 AT1G67900 39.579 523 278 8 1 501 1 507 5.13e-108 340
MS.gene75882.t1 AT1G67900 39.579 523 278 8 1 501 1 507 5.13e-108 340
MS.gene75882.t1 AT1G67900 39.579 523 278 8 1 501 1 507 5.13e-108 340
MS.gene75882.t1 AT3G08660 37.127 536 271 12 68 594 14 492 7.75e-107 333
MS.gene75882.t1 AT4G37590 38.388 521 247 12 1 503 1 465 1.75e-106 334
MS.gene75882.t1 AT4G31820 38.791 513 259 15 1 503 1 468 9.16e-105 329
MS.gene75882.t1 AT5G67440 38.356 511 278 10 1 506 1 479 1.89e-104 329
MS.gene75882.t1 AT5G67440 38.356 511 278 10 1 506 1 479 1.89e-104 329
MS.gene75882.t1 AT2G47860 35.079 573 316 10 23 573 34 572 4.07e-104 330
MS.gene75882.t1 AT2G30520 34.220 564 318 8 4 562 9 524 1.86e-103 327
MS.gene75882.t1 AT5G67385 36.559 465 265 5 47 510 1 436 1.48e-102 323
MS.gene75882.t1 AT5G67385 36.559 465 265 5 47 510 1 436 1.48e-102 323
MS.gene75882.t1 AT5G67385 36.559 465 265 5 47 510 1 436 1.48e-102 323
MS.gene75882.t1 AT5G67385 36.559 465 265 5 47 510 1 436 1.48e-102 323
MS.gene75882.t1 AT2G23050 37.428 521 251 13 1 510 1 457 2.50e-101 317
MS.gene75882.t1 AT2G14820 35.113 618 351 15 1 600 1 586 4.08e-101 322
MS.gene75882.t1 AT2G14820 35.113 618 351 15 1 600 1 586 4.08e-101 322
MS.gene75882.t1 AT2G47860 33.725 596 316 11 23 573 34 595 9.67e-99 316
MS.gene75882.t1 AT5G47800 35.785 503 292 9 1 501 1 474 3.13e-95 304
MS.gene75882.t1 AT5G47800 35.785 503 292 9 1 501 1 474 3.13e-95 304
MS.gene75882.t1 AT5G47800 35.785 503 292 9 1 501 1 474 3.13e-95 304
MS.gene75882.t1 AT5G47800 35.785 503 292 9 1 501 114 587 1.96e-93 303
MS.gene75882.t1 AT5G67440 37.342 474 261 9 37 506 1 442 2.07e-91 293
MS.gene75882.t1 AT3G26490 36.158 531 283 10 1 501 1 505 5.73e-91 294
MS.gene75882.t1 AT3G26490 36.158 531 283 10 1 501 1 505 5.73e-91 294
MS.gene75882.t1 AT3G26490 36.158 531 283 10 1 501 1 505 5.73e-91 294
MS.gene75882.t1 AT3G49970 33.396 530 270 11 36 563 4 452 4.17e-90 289
MS.gene75882.t1 AT3G49970 33.396 530 270 11 36 563 4 452 4.17e-90 289
MS.gene75882.t1 AT2G30520 33.525 522 295 7 46 562 2 476 2.23e-89 288
MS.gene75882.t1 AT2G30520 33.525 522 295 7 46 562 2 476 2.23e-89 288
MS.gene75882.t1 AT4G31820 37.609 460 233 14 53 503 1 415 8.83e-85 275
MS.gene75882.t1 AT3G08660 35.520 442 228 10 24 459 32 422 6.25e-79 257
MS.gene75882.t1 AT5G64330 42.773 339 167 2 282 593 369 707 1.74e-76 259
MS.gene75882.t1 AT5G64330 41.549 284 142 5 7 275 33 307 1.01e-63 224
MS.gene75882.t1 AT2G47860 33.884 484 268 9 112 573 1 454 1.05e-73 246
MS.gene75882.t1 AT2G47860 33.884 484 268 9 112 573 1 454 1.05e-73 246
MS.gene75882.t1 AT2G47860 33.778 450 253 8 15 452 27 443 1.32e-71 238
MS.gene75882.t1 AT3G26490 34.440 482 260 11 1 452 1 456 6.72e-69 233
MS.gene75882.t1 AT5G64330 48.988 247 111 1 282 513 310 556 2.46e-67 231
MS.gene75882.t1 AT5G64330 39.286 252 129 5 39 275 6 248 1.75e-46 174
MS.gene75882.t1 AT2G23050 35.556 405 191 11 112 510 1 341 2.50e-67 224
MS.gene75882.t1 AT5G64330 48.988 247 111 1 282 513 369 615 5.13e-67 232
MS.gene75882.t1 AT5G64330 41.549 284 142 5 7 275 33 307 3.21e-64 224
MS.gene75882.t1 AT2G47860 32.135 473 253 9 15 452 27 466 1.49e-66 226
MS.gene75882.t1 AT3G15570 33.882 425 226 9 215 615 29 422 1.03e-62 215
MS.gene75882.t1 AT3G03510 30.347 547 270 18 81 617 8 453 1.57e-60 209
MS.gene75882.t1 AT5G17580 30.943 488 285 10 28 509 22 463 2.87e-59 209
MS.gene75882.t1 AT5G17580 30.943 488 285 10 28 509 7 448 3.88e-59 208
MS.gene75882.t1 AT1G52770 33.578 408 211 10 215 596 28 401 1.92e-57 201
MS.gene75882.t1 AT3G19850 28.049 492 298 8 35 506 13 468 1.11e-53 193
MS.gene75882.t1 AT1G50280 29.228 479 292 8 35 497 13 460 4.48e-53 191
MS.gene75882.t1 AT3G22104 28.905 557 306 12 28 572 6 484 7.73e-53 189
MS.gene75882.t1 AT5G48130 28.626 524 290 13 19 521 32 492 1.48e-52 191
MS.gene75882.t1 AT1G50280 30.090 442 266 7 68 497 17 427 3.34e-52 187
MS.gene75882.t1 AT3G22104 28.454 485 259 10 98 572 3 409 2.55e-39 150
MS.gene75882.t1 AT3G22104 28.454 485 259 10 98 572 3 409 2.55e-39 150
MS.gene75882.t1 AT3G22104 28.454 485 259 10 98 572 3 409 2.55e-39 150
MS.gene75882.t1 AT3G49900 34.839 155 90 4 18 167 57 205 3.82e-14 75.9
MS.gene75882.t1 AT3G49900 31.319 182 97 6 420 580 222 396 2.02e-12 70.5
MS.gene75882.t1 AT3G49900 31.844 179 97 5 420 580 222 393 3.89e-14 75.9
MS.gene75882.t1 AT3G49900 34.839 155 90 4 18 167 57 205 3.99e-14 75.9

Find 188 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCACTGACCCAAATTTATT+TGG 0.101313 2.1:+43330880 MS.gene75882:CDS
ACCGGCCACCCAAATAAATT+TGG 0.169719 2.1:-43330889 None:intergenic
TCCATTGAATACGAGAAATT+TGG 0.207917 2.1:-43331408 None:intergenic
CTAAATGGCTTGTGTGAAAT+TGG 0.215346 2.1:+43328800 None:intergenic
CAATCTAAACTTGTATTCTT+TGG 0.250976 2.1:-43330985 None:intergenic
GAGGACCACTTGATTGAAAA+AGG 0.277475 2.1:-43330746 None:intergenic
TTAAATCGACGTAAGGTTTC+CGG 0.287229 2.1:+43331141 MS.gene75882:CDS
CCGACTTGCCCCGGCGGCTT+TGG 0.300388 2.1:+43331176 MS.gene75882:CDS
ATTCACCTTCACGACATTCC+TGG 0.306044 2.1:+43330571 MS.gene75882:CDS
TCAAACCTGTGACGATGTTC+TGG 0.307209 2.1:+43330798 MS.gene75882:CDS
CTTGCCATGGATCAGATTAC+AGG 0.311344 2.1:+43331477 MS.gene75882:CDS
CGCAGCAAGGGCTTGAAACT+TGG 0.320695 2.1:-43331634 None:intergenic
CTAGTATCAGACAATCTTGA+TGG 0.328216 2.1:+43332681 MS.gene75882:CDS
CCCCTCCTGCATATCAAGTT+TGG 0.330467 2.1:+43331332 MS.gene75882:CDS
TTCCTCTGATTCAGAAGCTT+TGG 0.343310 2.1:-43330539 None:intergenic
TTCACCTTCACGACATTCCT+GGG 0.351137 2.1:+43330572 MS.gene75882:CDS
GCAGCTTGATCAAGCTGCTT+TGG 0.352308 2.1:+43331371 MS.gene75882:CDS
TTTATTTGGGTGGCCGGTAT+TGG 0.353243 2.1:+43330894 MS.gene75882:CDS
AAGAAATTTAAGAAGTGGTT+TGG 0.359275 2.1:+43332707 MS.gene75882:CDS
GCTCTCTAGAAGCGGAGTTT+TGG 0.362369 2.1:+43330504 MS.gene75882:CDS
TCCAGAGTATGCCAGGCCTT+TGG 0.363293 2.1:+43331662 MS.gene75882:CDS
AACTTGAACTATGATTCTAA+TGG 0.368718 2.1:-43332610 None:intergenic
CCACTGACCCAAATTTATTT+GGG 0.370052 2.1:+43330881 MS.gene75882:CDS
ACTTGAACTATGATTCTAAT+GGG 0.375360 2.1:-43332609 None:intergenic
AGCTGATGCATTTCAGCGTC+AGG 0.382481 2.1:+43328830 MS.gene75882:CDS
TACCTTCAAGTAAATATCTA+TGG 0.383467 2.1:-43331703 None:intergenic
GACCAAACAGGAACTTCGTT+TGG 0.385712 2.1:-43331278 None:intergenic
TCATGGAATCTCGGGGCATT+AGG 0.390977 2.1:+43331064 MS.gene75882:CDS
GCCAAATTTCTCGTATTCAA+TGG 0.392041 2.1:+43331407 MS.gene75882:CDS
TGCCATAGATATTTACTTGA+AGG 0.393378 2.1:+43331701 MS.gene75882:CDS
CTTGAAATGACTGAGGAATA+TGG 0.395110 2.1:+43330694 MS.gene75882:CDS
CGGATCAAACGAGGGTGGTT+GGG 0.395561 2.1:+43332731 MS.gene75882:CDS
CAAAGCCGCCGGGGCAAGTC+GGG 0.402893 2.1:-43331175 None:intergenic
AGGATCATCAACAAGCGCTT+GGG 0.416229 2.1:+43332881 MS.gene75882:CDS
CCCAAATTTATTTGGGTGGC+CGG 0.418612 2.1:+43330888 MS.gene75882:CDS
TCTCATAGGTTCTGTACGAC+TGG 0.419161 2.1:+43329857 MS.gene75882:intron
GCTATCAACCTCTTATAAAT+CGG 0.425936 2.1:-43331039 None:intergenic
TGAGTTTACCGATTTATAAG+AGG 0.428569 2.1:+43331031 MS.gene75882:CDS
CCATCCCTACTTTCAATACC+TGG 0.430767 2.1:-43332773 None:intergenic
CGCCGGGGCAAGTCGGGTAC+TGG 0.433152 2.1:-43331169 None:intergenic
CCGGCCACCCAAATAAATTT+GGG 0.435121 2.1:-43330888 None:intergenic
GTCTGATACTAGAAAGCAAC+CGG 0.444780 2.1:-43332670 None:intergenic
AACTTCAACAACTATATCGC+TGG 0.445402 2.1:-43329885 None:intergenic
TAAATGGCTTGTGTGAAATT+GGG 0.445614 2.1:+43328801 None:intergenic
AGAGCAACTATGCAGGCTAA+TGG 0.445791 2.1:+43332530 MS.gene75882:CDS
GTCCAAACGAAGTTCCTGTT+TGG 0.445857 2.1:+43331276 MS.gene75882:CDS
TCGGATCAAACGAGGGTGGT+TGG 0.447545 2.1:+43332730 MS.gene75882:CDS
TAACATATACCTTGTGAAGA+TGG 0.448559 2.1:-43329922 None:intergenic
CAAAGAATACAAGTTTAGAT+TGG 0.448924 2.1:+43330986 MS.gene75882:CDS
TATGCCAGGCCTTTGGATGA+TGG 0.451109 2.1:+43331669 MS.gene75882:CDS
AGCATAGAAAGCAAGAGAAC+CGG 0.452027 2.1:-43331100 None:intergenic
GCGAAGGTGATCCGATCAAC+TGG 0.452879 2.1:-43331533 None:intergenic
TCTTGATCATTTCCTTGCCA+TGG 0.453035 2.1:+43331464 MS.gene75882:CDS
GATAGCTGTCATGGAATCTC+GGG 0.454848 2.1:+43331056 MS.gene75882:CDS
ATCAAGTGGTCCTCCGAAGT+TGG 0.458366 2.1:+43330755 MS.gene75882:CDS
TATGCTAAAACGTATTTGCC+TGG 0.462210 2.1:+43331117 MS.gene75882:CDS
GAAAACCAGGTATTGAAAGT+AGG 0.462978 2.1:+43332768 MS.gene75882:CDS
CATTGAATCGCTTGCAGCAA+AGG 0.464806 2.1:+43330855 MS.gene75882:CDS
GGATGGATAACATGAGGATG+AGG 0.466944 2.1:+43332790 MS.gene75882:CDS
ATTAGGCAGGAAATCATTGC+CGG 0.470715 2.1:+43331081 MS.gene75882:CDS
ATGCTTCTAATGAGAGCTTC+TGG 0.471327 2.1:-43332557 None:intergenic
AAACTTGGTGGTAAGGCAAA+AGG 0.474024 2.1:+43332861 MS.gene75882:CDS
TCCAAAGGCCTGGCATACTC+TGG 0.474498 2.1:-43331663 None:intergenic
CGGCTGTTCCAGAGTATGCC+AGG 0.480333 2.1:+43331655 MS.gene75882:CDS
CTTTCTGACTCCACCAACCA+TGG 0.480617 2.1:-43332507 None:intergenic
CTCAGTCATTTCAAGATGCT+CGG 0.483019 2.1:-43330686 None:intergenic
CTCTGGAACAGCCGCAGCAA+GGG 0.483062 2.1:-43331646 None:intergenic
GATTGAGAAACTTGGTGGTA+AGG 0.484108 2.1:+43332854 MS.gene75882:CDS
TTGTGGAATGGAATAAGTAC+TGG 0.484290 2.1:+43330955 MS.gene75882:CDS
CTCCGCTTCTAGAGAGCAAA+GGG 0.485842 2.1:-43330498 None:intergenic
AAGGATCATCAACAAGCGCT+TGG 0.487581 2.1:+43332880 MS.gene75882:CDS
GCATATCAAGTTTGGAGAAA+CGG 0.488053 2.1:+43331340 MS.gene75882:CDS
GATGAAGATGGCCAGTTGAT+CGG 0.488805 2.1:+43331522 MS.gene75882:CDS
TTTCTCCAAACTTGATATGC+AGG 0.489280 2.1:-43331337 None:intergenic
TGGACCAGGCCCTTCTGCAT+TGG 0.490474 2.1:-43331258 None:intergenic
AATTTAAGAAGTGGTTTGGT+CGG 0.490890 2.1:+43332711 MS.gene75882:CDS
GGTGGTCCCTTGCAGAGCCC+TGG 0.491765 2.1:+43330922 MS.gene75882:CDS
CCCAAATAAATTTGGGTCAG+TGG 0.499752 2.1:-43330881 None:intergenic
TGATAGCTGTCATGGAATCT+CGG 0.500109 2.1:+43331055 MS.gene75882:CDS
AAAACCAGGTATTGAAAGTA+GGG 0.500447 2.1:+43332769 MS.gene75882:CDS
GGAATCTCGGGGCATTAGGC+AGG 0.501114 2.1:+43331068 MS.gene75882:CDS
CATCAAATGTTGTGTGCCTA+TGG 0.501250 2.1:+43330656 MS.gene75882:CDS
GCCTGGTTTAAATCGACGTA+AGG 0.502553 2.1:+43331134 MS.gene75882:CDS
CAATGTGAAGCTCTTCAGCT+TGG 0.502575 2.1:-43330822 None:intergenic
ACTTCCAATGCAGAAGGGCC+TGG 0.503073 2.1:+43331254 MS.gene75882:CDS
GCAGCAAGGGCTTGAAACTT+GGG 0.505459 2.1:-43331633 None:intergenic
TAAGAGGTTGATAGCTGTCA+TGG 0.506296 2.1:+43331047 MS.gene75882:CDS
CCGTTCGAAGTAGACCAAAC+AGG 0.506791 2.1:-43331290 None:intergenic
AGAATACAAGTTTAGATTGG+TGG 0.508754 2.1:+43330989 MS.gene75882:CDS
TGGTTGGGCGTCCGCAGTCA+AGG 0.510813 2.1:+43332746 MS.gene75882:CDS
GGACCACCACGCTCCAATAC+CGG 0.510887 2.1:-43330907 None:intergenic
ACTCTGGAACAGCCGCAGCA+AGG 0.514323 2.1:-43331647 None:intergenic
CAGAAAGAGAGCAACTATGC+AGG 0.514538 2.1:+43332523 MS.gene75882:CDS
GGAGTTGTGTCGAAGAAACT+CGG 0.516025 2.1:+43332903 MS.gene75882:CDS
ACAGGTTTGAAGTGCCCTCA+TGG 0.516803 2.1:-43330785 None:intergenic
AGCGATATAGTTGTTGAAGT+TGG 0.517502 2.1:+43329887 MS.gene75882:CDS
TTCCCTTTGCTCTCTAGAAG+CGG 0.518687 2.1:+43330496 MS.gene75882:CDS
CGGCTATTGAAGTACGAAGC+TGG 0.520526 2.1:-43332650 None:intergenic
TCATGGAGTCTTTCCAACTT+CGG 0.524589 2.1:-43330768 None:intergenic
CCAAAGCCGCCGGGGCAAGT+CGG 0.525938 2.1:-43331176 None:intergenic
CTCATAGGTTCTGTACGACT+GGG 0.527049 2.1:+43329858 MS.gene75882:intron
CCTGTTTGGTCTACTTCGAA+CGG 0.529380 2.1:+43331290 MS.gene75882:CDS
GTGGAGATACCAAAGCCGCC+GGG 0.530973 2.1:-43331185 None:intergenic
CCCACGCTGCACAGAATGAA+AGG 0.531374 2.1:+43332583 MS.gene75882:CDS
CAGCTTCGTACTTCAATAGC+CGG 0.531398 2.1:+43332651 MS.gene75882:CDS
GGATCAAGAAATTTAAGAAG+TGG 0.532419 2.1:+43332702 MS.gene75882:CDS
GATGGATAACATGAGGATGA+GGG 0.535092 2.1:+43332791 MS.gene75882:CDS
CCTTTCATTCTGTGCAGCGT+GGG 0.535407 2.1:-43332583 None:intergenic
CCAGGTATTGAAAGTAGGGA+TGG 0.537431 2.1:+43332773 MS.gene75882:CDS
GGTGGAGATACCAAAGCCGC+CGG 0.537880 2.1:-43331186 None:intergenic
TTGGTCCAGAACATCGTCAC+AGG 0.539015 2.1:-43330803 None:intergenic
TAAACCATCATCCAAAGGCC+TGG 0.541161 2.1:-43331673 None:intergenic
TAATAATGTTGAGAAGTTGA+AGG 0.542604 2.1:+43332992 MS.gene75882:CDS
TTCAGCGTCAGGGTCAAGCC+TGG 0.548379 2.1:+43328841 MS.gene75882:CDS
ATGGTGGCAAAACTGATTGA+TGG 0.550952 2.1:+43331570 MS.gene75882:CDS
CCATGCTCGATTGATGAAGA+TGG 0.551203 2.1:+43331510 MS.gene75882:CDS
GTAGTCTCACCCATGGTTGG+TGG 0.556559 2.1:+43332497 MS.gene75882:intron
GGGTGGCCGGTATTGGAGCG+TGG 0.558111 2.1:+43330901 MS.gene75882:CDS
GGGGTTCACTCGTAAAATCA+TGG 0.558705 2.1:-43331313 None:intergenic
GGTCCCTTGCAGAGCCCTGG+TGG 0.559347 2.1:+43330925 MS.gene75882:CDS
GCCTTTCATTCTGTGCAGCG+TGG 0.559357 2.1:-43332584 None:intergenic
GTCCAGTACCCGACTTGCCC+CGG 0.560240 2.1:+43331167 MS.gene75882:CDS
CTCGTTGCAAAATTCTGCTA+CGG 0.561543 2.1:+43330613 MS.gene75882:CDS
AGGCAAGAGATTGAGAAACT+TGG 0.562530 2.1:+43332846 MS.gene75882:CDS
CAAGAGATTGAGAAACTTGG+TGG 0.566917 2.1:+43332849 MS.gene75882:CDS
CTGACCCAAATTTATTTGGG+TGG 0.567317 2.1:+43330884 MS.gene75882:CDS
ACAGGAACTTCGTTTGGACC+AGG 0.567444 2.1:-43331272 None:intergenic
AATGTAGTCTCACCCATGGT+TGG 0.574857 2.1:+43332494 MS.gene75882:intron
GTCCGCAGTCAAGGAAAACC+AGG 0.577407 2.1:+43332755 MS.gene75882:CDS
CCTTCACGACATTCCTGGGG+GGG 0.577801 2.1:+43330576 MS.gene75882:CDS
TGCCAAAGCTTCTGAATCAG+AGG 0.579982 2.1:+43330537 MS.gene75882:CDS
TCCAAACTTGATATGCAGGA+GGG 0.581282 2.1:-43331333 None:intergenic
TTTCTGACTCCACCAACCAT+GGG 0.582257 2.1:-43332506 None:intergenic
GTGTAGTGCTCAAGAAGGAT+CGG 0.586844 2.1:+43332947 MS.gene75882:CDS
ACTTCCACCAGGGCTCTGCA+AGG 0.589029 2.1:-43330929 None:intergenic
CAAATGTGTAGTGCTCAAGA+AGG 0.589729 2.1:+43332942 MS.gene75882:CDS
GGATCATCAACAAGCGCTTG+GGG 0.592474 2.1:+43332882 MS.gene75882:CDS
CTCCAAACTTGATATGCAGG+AGG 0.592638 2.1:-43331334 None:intergenic
CCATCTTCATCAATCGAGCA+TGG 0.594471 2.1:-43331510 None:intergenic
TTCCACAAAACACTTCCACC+AGG 0.597710 2.1:-43330940 None:intergenic
CACCTTCACGACATTCCTGG+GGG 0.599114 2.1:+43330574 MS.gene75882:CDS
TCACCTTCACGACATTCCTG+GGG 0.599722 2.1:+43330573 MS.gene75882:CDS
TCAACTACTTCCAATGCAGA+AGG 0.600159 2.1:+43331248 MS.gene75882:CDS
GAGTTGTGTCGAAGAAACTC+GGG 0.601000 2.1:+43332904 MS.gene75882:CDS
CCAAACTTGATATGCAGGAG+GGG 0.601427 2.1:-43331332 None:intergenic
ACTCCGCTTCTAGAGAGCAA+AGG 0.602649 2.1:-43330499 None:intergenic
TGTGGAATGGAATAAGTACT+GGG 0.603289 2.1:+43330956 MS.gene75882:CDS
ACCACCTGTAATCTGATCCA+TGG 0.603327 2.1:-43331481 None:intergenic
AAGTCGGGTACTGGACTCAC+CGG 0.604525 2.1:-43331160 None:intergenic
ACTTCAACAACTATATCGCT+GGG 0.604586 2.1:-43329884 None:intergenic
CGGCGTGAAACTCGAACTTA+CGG 0.608879 2.1:+43330633 MS.gene75882:CDS
CTTCCACCAGGGCTCTGCAA+GGG 0.608990 2.1:-43330928 None:intergenic
TGGAGTCTTTCCAACTTCGG+AGG 0.613226 2.1:-43330765 None:intergenic
AGTTCTTCTATCAGTGACAA+AGG 0.615429 2.1:+43333038 MS.gene75882:CDS
CAACTACTTCCAATGCAGAA+GGG 0.618123 2.1:+43331249 MS.gene75882:CDS
CAAGTTTCAAGCCCTTGCTG+CGG 0.622416 2.1:+43331635 MS.gene75882:CDS
AAGTTTAGATTGGTGGTACG+AGG 0.622652 2.1:+43330996 MS.gene75882:CDS
TCAAGTTTGGAGAAACGGAT+CGG 0.623514 2.1:+43331345 MS.gene75882:CDS
CTGTAATCTGATCCATGGCA+AGG 0.624523 2.1:-43331476 None:intergenic
TGGTTTGGTCGGATCAAACG+AGG 0.629492 2.1:+43332722 MS.gene75882:CDS
GATGCTCGGCAGCACACCAT+AGG 0.630199 2.1:-43330672 None:intergenic
ACCTTACGTCGATTTAAACC+AGG 0.632381 2.1:-43331135 None:intergenic
CGATATAAACCATCATCCAA+AGG 0.642132 2.1:-43331678 None:intergenic
GCTGATGCATTTCAGCGTCA+GGG 0.642653 2.1:+43328831 MS.gene75882:CDS
AGAAAGAGTGCTCAAACATG+AGG 0.645720 2.1:+43332826 MS.gene75882:CDS
TGGCCGGTATTGGAGCGTGG+TGG 0.653763 2.1:+43330904 MS.gene75882:CDS
AAGTAGGGATGGATAACATG+AGG 0.657466 2.1:+43332784 MS.gene75882:CDS
CTTGAACTATGATTCTAATG+GGG 0.660628 2.1:-43332608 None:intergenic
ATGACTGAGGAATATGGTGA+AGG 0.661743 2.1:+43330700 MS.gene75882:CDS
GCCATGGATCAGATTACAGG+TGG 0.662491 2.1:+43331480 MS.gene75882:CDS
CGAGCATCTTGAAATGACTG+AGG 0.662506 2.1:+43330687 MS.gene75882:CDS
GAAGTTGGAAAGACTCCATG+AGG 0.663944 2.1:+43330770 MS.gene75882:CDS
TCGGTTAGCAAACAGAACAA+TGG 0.664151 2.1:+43332966 MS.gene75882:CDS
TTGGTCGGATCAAACGAGGG+TGG 0.670508 2.1:+43332726 MS.gene75882:CDS
TTCGCTGACACCCATCACCA+TGG 0.672093 2.1:+43331551 MS.gene75882:CDS
ATGGTGATGGGTGTCAGCGA+AGG 0.673043 2.1:-43331549 None:intergenic
TGGAGATACCAAAGCCGCCG+GGG 0.674941 2.1:-43331184 None:intergenic
GATGTCTTTCCATCTTCACA+AGG 0.675008 2.1:+43329913 MS.gene75882:CDS
GATTGATGGTTACCTCGCAG+AGG 0.680021 2.1:+43331584 MS.gene75882:CDS
ACCTTCACGACATTCCTGGG+GGG 0.686037 2.1:+43330575 MS.gene75882:CDS
TCCACAAAACACTTCCACCA+GGG 0.688214 2.1:-43330939 None:intergenic
ATAGCTGTCATGGAATCTCG+GGG 0.692208 2.1:+43331057 MS.gene75882:CDS
CAGTACCCGACTTGCCCCGG+CGG 0.708990 2.1:+43331170 MS.gene75882:CDS
GGTTTGGTCGGATCAAACGA+GGG 0.709075 2.1:+43332723 MS.gene75882:CDS
CATCTGGGGCAACCTCTGCG+AGG 0.712597 2.1:-43331596 None:intergenic
GTGGAATGGAATAAGTACTG+GGG 0.725932 2.1:+43330957 MS.gene75882:CDS
AAGTTGGAAAGACTCCATGA+GGG 0.728057 2.1:+43330771 MS.gene75882:CDS
GCTGACACCCATCACCATGG+TGG 0.738037 2.1:+43331554 MS.gene75882:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAATTTATTTTCTTTG+TGG + chr2.1:43329402-43329421 MS.gene75882:intron 10.0%
!! AAAAATATGCAACATAATTA+GGG + chr2.1:43332082-43332101 MS.gene75882:intron 15.0%
!! AAGATATGTTTATTATATGA+TGG + chr2.1:43329695-43329714 MS.gene75882:intron 15.0%
!! TGAAAATATTAAACATTAAG+TGG - chr2.1:43329833-43329852 None:intergenic 15.0%
!!! TAAATTAAAAGAGCATAAAA+AGG - chr2.1:43328884-43328903 None:intergenic 15.0%
!!! TCTTTTTTTTAAATGATGTT+TGG + chr2.1:43330240-43330259 MS.gene75882:intron 15.0%
!! AAAATATAGCACTAAGTAAT+AGG - chr2.1:43329610-43329629 None:intergenic 20.0%
!! AAAATATGCAACATAATTAG+GGG + chr2.1:43332083-43332102 MS.gene75882:intron 20.0%
!! AACATATATAATATTCACTC+AGG - chr2.1:43331854-43331873 None:intergenic 20.0%
!! GAAAAATATGCAACATAATT+AGG + chr2.1:43332081-43332100 MS.gene75882:intron 20.0%
!! GATTAAACAATATATATGAG+TGG + chr2.1:43329290-43329309 MS.gene75882:intron 20.0%
!! GGTATGGTATATATTATAAT+GGG + chr2.1:43331780-43331799 MS.gene75882:intron 20.0%
!!! ATTATAATGGGTTTATCTTA+TGG + chr2.1:43331792-43331811 MS.gene75882:intron 20.0%
!!! ATTTTCAATCAAATATGCTT+TGG - chr2.1:43332261-43332280 None:intergenic 20.0%
!!! GAAAATTTTCTGTATTTTCA+AGG - chr2.1:43332388-43332407 None:intergenic 20.0%
!!! GAAAATTTTCTTTGTTGTTT+TGG + chr2.1:43332398-43332417 MS.gene75882:intron 20.0%
!!! TAGTTAGTTTTAATATGCTT+CGG + chr2.1:43331759-43331778 MS.gene75882:intron 20.0%
!!! TGATTTGTTAAAATTCACAA+GGG - chr2.1:43330089-43330108 None:intergenic 20.0%
!!! TTACTTAGTGCTATATTTTT+TGG + chr2.1:43329611-43329630 MS.gene75882:intron 20.0%
!!! TTGATTTGTTAAAATTCACA+AGG - chr2.1:43330090-43330109 None:intergenic 20.0%
!!! TTTATTATATGATGGTGAAT+CGG + chr2.1:43329703-43329722 MS.gene75882:intron 20.0%
!!! TTTTCAATCAAATATGCTTT+GGG - chr2.1:43332260-43332279 None:intergenic 20.0%
! AACGCAGTTGAAAATTTAAT+AGG + chr2.1:43332127-43332146 MS.gene75882:intron 25.0%
! AACTTGAACTATGATTCTAA+TGG - chr2.1:43332613-43332632 None:intergenic 25.0%
! AAGAAATTTAAGAAGTGGTT+TGG + chr2.1:43332707-43332726 MS.gene75882:CDS 25.0%
! ACGCAGTTGAAAATTTAATA+GGG + chr2.1:43332128-43332147 MS.gene75882:intron 25.0%
! ACTTGAACTATGATTCTAAT+GGG - chr2.1:43332612-43332631 None:intergenic 25.0%
! AGAAGATCAAAAAATTCTTC+TGG + chr2.1:43331215-43331234 MS.gene75882:CDS 25.0%
! ATTTGGGTCTCATATAAATT+TGG + chr2.1:43330058-43330077 MS.gene75882:intron 25.0%
! CAAAGAATACAAGTTTAGAT+TGG + chr2.1:43330986-43331005 MS.gene75882:CDS 25.0%
! CAATCTAAACTTGTATTCTT+TGG - chr2.1:43330988-43331007 None:intergenic 25.0%
! CGGTATGGTATATATTATAA+TGG + chr2.1:43331779-43331798 MS.gene75882:intron 25.0%
! GAAAATATAGATAGGGTTTA+GGG + chr2.1:43332172-43332191 MS.gene75882:intron 25.0%
! GTATGAATGAAATAAACGTA+TGG - chr2.1:43329642-43329661 None:intergenic 25.0%
! TAATAATGTTGAGAAGTTGA+AGG + chr2.1:43332992-43333011 MS.gene75882:CDS 25.0%
! TACCTTCAAGTAAATATCTA+TGG - chr2.1:43331706-43331725 None:intergenic 25.0%
! TATTAAAAAGTTACTACCTC+CGG + chr2.1:43331930-43331949 MS.gene75882:intron 25.0%
! TCTCAATTAAAATGACCTAA+AGG - chr2.1:43329750-43329769 None:intergenic 25.0%
! TTGAAGAAATGATTCTGTTA+AGG + chr2.1:43329115-43329134 MS.gene75882:intron 25.0%
! TTTGGGTCTCATATAAATTT+GGG + chr2.1:43330059-43330078 MS.gene75882:intron 25.0%
!! AAAAGAGCATAAAAAGGATA+AGG - chr2.1:43328878-43328897 None:intergenic 25.0%
!! AAAGAGCATAAAAAGGATAA+GGG - chr2.1:43328877-43328896 None:intergenic 25.0%
!! AATATTTTCATTGCTCTCAT+AGG + chr2.1:43329843-43329862 MS.gene75882:intron 25.0%
!! ACGTTTTCAAACTATATTGT+TGG + chr2.1:43332306-43332325 MS.gene75882:intron 25.0%
!! AGTTTGAAAACGTTTTACAA+AGG - chr2.1:43332299-43332318 None:intergenic 25.0%
!! AGTTTTTGTGATTTAGTCAA+CGG - chr2.1:43331972-43331991 None:intergenic 25.0%
!! CACAAAAACTTTAAGAATGT+TGG + chr2.1:43331982-43332001 MS.gene75882:intron 25.0%
!! GTTTTACAAGTTTACTCTTT+AGG + chr2.1:43332009-43332028 MS.gene75882:intron 25.0%
!! TGTTTGTGATTGTGAATTTT+AGG + chr2.1:43328962-43328981 MS.gene75882:intron 25.0%
!! TTATTTTCTTTGTGGTCTTT+AGG + chr2.1:43329410-43329429 MS.gene75882:intron 25.0%
!! TTTCTTTTAGTGTTTATCAG+TGG + chr2.1:43329046-43329065 MS.gene75882:intron 25.0%
!!! AAGTTTTAAGTTAACATCTG+GGG - chr2.1:43331613-43331632 None:intergenic 25.0%
!!! ATTTTTTGATCTTCTTCAGA+TGG - chr2.1:43331210-43331229 None:intergenic 25.0%
!!! GAAGTTTTAAGTTAACATCT+GGG - chr2.1:43331614-43331633 None:intergenic 25.0%
!!! TGATTGTGAATTTTAGGATT+TGG + chr2.1:43328968-43328987 MS.gene75882:intron 25.0%
!!! TTTCTGTATTTTCAAGGATT+GGG - chr2.1:43332382-43332401 None:intergenic 25.0%
!!! TTTTCTGTATTTTCAAGGAT+TGG - chr2.1:43332383-43332402 None:intergenic 25.0%
AAATCTGTAATCTGTGCATT+TGG + chr2.1:43329316-43329335 MS.gene75882:intron 30.0%
AAGCGTATATACAAATACAG+AGG - chr2.1:43330432-43330451 None:intergenic 30.0%
AATCCCAAATTCTACATAGA+GGG - chr2.1:43329182-43329201 None:intergenic 30.0%
ACTGTTATGCTTATTGATGT+TGG + chr2.1:43332429-43332448 MS.gene75882:intron 30.0%
AGAATACAAGTTTAGATTGG+TGG + chr2.1:43330989-43331008 MS.gene75882:CDS 30.0%
AGCGTATATACAAATACAGA+GGG - chr2.1:43330431-43330450 None:intergenic 30.0%
ATGAGACCCAAATGATTTAA+TGG - chr2.1:43330051-43330070 None:intergenic 30.0%
CACTTGATTGAAAAAGGTTT+CGG - chr2.1:43330743-43330762 None:intergenic 30.0%
CGCAGTTGAAAATTTAATAG+GGG + chr2.1:43332129-43332148 MS.gene75882:intron 30.0%
CTTCAATTATTCCTTCTTAG+AGG + chr2.1:43333069-43333088 MS.gene75882:CDS 30.0%
CTTGAACTATGATTCTAATG+GGG - chr2.1:43332611-43332630 None:intergenic 30.0%
GACAAGGGAAAATATAGATA+GGG + chr2.1:43332165-43332184 MS.gene75882:intron 30.0%
GATCTATCTAGTATCTATCA+AGG - chr2.1:43329160-43329179 None:intergenic 30.0%
GATTGAAAATCACATATCCT+TGG + chr2.1:43332271-43332290 MS.gene75882:intron 30.0%
GCTATCAACCTCTTATAAAT+CGG - chr2.1:43331042-43331061 None:intergenic 30.0%
GGAAAATATAGATAGGGTTT+AGG + chr2.1:43332171-43332190 MS.gene75882:intron 30.0%
GGATCAAGAAATTTAAGAAG+TGG + chr2.1:43332702-43332721 MS.gene75882:CDS 30.0%
TAACATATACCTTGTGAAGA+TGG - chr2.1:43329925-43329944 None:intergenic 30.0%
TAATAGGGGTCTAATAAGAA+TGG + chr2.1:43332143-43332162 MS.gene75882:intron 30.0%
TAGCTGATGCACTATTAATA+CGG + chr2.1:43330189-43330208 MS.gene75882:intron 30.0%
TCCATTGAATACGAGAAATT+TGG - chr2.1:43331411-43331430 None:intergenic 30.0%
TGACCTAAAGGAAATAACAA+CGG - chr2.1:43329738-43329757 None:intergenic 30.0%
TGAGACCCAAATGATTTAAT+GGG - chr2.1:43330050-43330069 None:intergenic 30.0%
TGCCATAGATATTTACTTGA+AGG + chr2.1:43331701-43331720 MS.gene75882:CDS 30.0%
TTGGGTCTCATATAAATTTG+GGG + chr2.1:43330060-43330079 MS.gene75882:intron 30.0%
! AATATGCTTTGGGTAAAGTA+AGG - chr2.1:43332250-43332269 None:intergenic 30.0%
! GTGAGTTTGAAGTATCATAA+GGG - chr2.1:43329667-43329686 None:intergenic 30.0%
! GTTTTTGTGATTTAGTCAAC+GGG - chr2.1:43331971-43331990 None:intergenic 30.0%
! TGTGAGTTTGAAGTATCATA+AGG - chr2.1:43329668-43329687 None:intergenic 30.0%
! TTGGGAATAAAAGCATAAAC+TGG - chr2.1:43332364-43332383 None:intergenic 30.0%
!! AAAACCAGGTATTGAAAGTA+GGG + chr2.1:43332769-43332788 MS.gene75882:CDS 30.0%
!! AATTTAAGAAGTGGTTTGGT+CGG + chr2.1:43332711-43332730 MS.gene75882:CDS 30.0%
!! AGTTTTAATATGCTTCGGTA+TGG + chr2.1:43331764-43331783 MS.gene75882:intron 30.0%
!! TAAGTTGTTGGTTTACTGAT+AGG + chr2.1:43329011-43329030 MS.gene75882:intron 30.0%
!! TACTCTTTAGGATAGAGAAT+TGG + chr2.1:43332021-43332040 MS.gene75882:intron 30.0%
!! TGAGTTTACCGATTTATAAG+AGG + chr2.1:43331031-43331050 MS.gene75882:CDS 30.0%
!!! GGAAGTTTTAAGTTAACATC+TGG - chr2.1:43331615-43331634 None:intergenic 30.0%
!!! GTTTTTCTGCTTTAAGTTGT+TGG + chr2.1:43328999-43329018 MS.gene75882:intron 30.0%
AAAAAATGTAGTCTCACCCA+TGG + chr2.1:43332490-43332509 MS.gene75882:intron 35.0%
AACTGCATTAAGTGTGCATA+GGG - chr2.1:43330478-43330497 None:intergenic 35.0%
AACTTCAACAACTATATCGC+TGG - chr2.1:43329888-43329907 None:intergenic 35.0%
AAGTAAGGTCACTCAAATCA+CGG - chr2.1:43332235-43332254 None:intergenic 35.0%
AAGTTCATGTAACTGGACTT+TGG - chr2.1:43329577-43329596 None:intergenic 35.0%
ACTTCAACAACTATATCGCT+GGG - chr2.1:43329887-43329906 None:intergenic 35.0%
ACTTTGGCCTATCATACAAA+AGG - chr2.1:43329561-43329580 None:intergenic 35.0%
AGATCCCTCTATGTAGAATT+TGG + chr2.1:43329175-43329194 MS.gene75882:intron 35.0%
AGCGATATAGTTGTTGAAGT+TGG + chr2.1:43329887-43329906 MS.gene75882:CDS 35.0%
AGTTCTTCTATCAGTGACAA+AGG + chr2.1:43333038-43333057 MS.gene75882:CDS 35.0%
ATATAGATAGGGTTTAGGGA+TGG + chr2.1:43332176-43332195 MS.gene75882:intron 35.0%
ATGCGTCCCATTAAATCATT+TGG + chr2.1:43330041-43330060 MS.gene75882:intron 35.0%
ATTGAAAAAGGTTTCGGCTT+GGG - chr2.1:43330737-43330756 None:intergenic 35.0%
CAATCCCAAATTCTACATAG+AGG - chr2.1:43329183-43329202 None:intergenic 35.0%
CCACTGACCCAAATTTATTT+GGG + chr2.1:43330881-43330900 MS.gene75882:CDS 35.0%
CGATATAAACCATCATCCAA+AGG - chr2.1:43331681-43331700 None:intergenic 35.0%
CTAGTATCAGACAATCTTGA+TGG + chr2.1:43332681-43332700 MS.gene75882:CDS 35.0%
CTTGAAATGACTGAGGAATA+TGG + chr2.1:43330694-43330713 MS.gene75882:CDS 35.0%
GATAAGGGTAGATAAATACC+AGG - chr2.1:43328862-43328881 None:intergenic 35.0%
GATCCCTCTATGTAGAATTT+GGG + chr2.1:43329176-43329195 MS.gene75882:intron 35.0%
GATGGCAATTTGCATGTATA+AGG + chr2.1:43329492-43329511 MS.gene75882:intron 35.0%
GCATATCAAGTTTGGAGAAA+CGG + chr2.1:43331340-43331359 MS.gene75882:CDS 35.0%
GCCAAATTTCTCGTATTCAA+TGG + chr2.1:43331407-43331426 MS.gene75882:CDS 35.0%
GGACAAGGGAAAATATAGAT+AGG + chr2.1:43332164-43332183 MS.gene75882:intron 35.0%
GGTCTAATAAGAATGGACAA+GGG + chr2.1:43332150-43332169 MS.gene75882:intron 35.0%
TAAATGATGTTTGGCTGACT+TGG + chr2.1:43330249-43330268 MS.gene75882:intron 35.0%
TACTCAATGTTGCTACTGTT+TGG + chr2.1:43330387-43330406 MS.gene75882:intron 35.0%
TATGCTAAAACGTATTTGCC+TGG + chr2.1:43331117-43331136 MS.gene75882:CDS 35.0%
TCCACTGACCCAAATTTATT+TGG + chr2.1:43330880-43330899 MS.gene75882:CDS 35.0%
TGCGTCCCATTAAATCATTT+GGG + chr2.1:43330042-43330061 MS.gene75882:intron 35.0%
TGGGTCTCATATAAATTTGG+GGG + chr2.1:43330061-43330080 MS.gene75882:intron 35.0%
TGGTTTACTGATAGGTTACT+TGG + chr2.1:43329019-43329038 MS.gene75882:intron 35.0%
TGTGGAATGGAATAAGTACT+GGG + chr2.1:43330956-43330975 MS.gene75882:CDS 35.0%
TGTTAGCGTTGTTCATTTAG+AGG + chr2.1:43330135-43330154 MS.gene75882:intron 35.0%
TTAAATCGACGTAAGGTTTC+CGG + chr2.1:43331141-43331160 MS.gene75882:CDS 35.0%
TTGTGGAATGGAATAAGTAC+TGG + chr2.1:43330955-43330974 MS.gene75882:CDS 35.0%
TTTCTCCAAACTTGATATGC+AGG - chr2.1:43331340-43331359 None:intergenic 35.0%
! AAGGGAACCTTTTGTATGAT+AGG + chr2.1:43329551-43329570 MS.gene75882:intron 35.0%
! ATGTAGAATTTGGGATTGGT+TGG + chr2.1:43329185-43329204 MS.gene75882:intron 35.0%
! CTCTATGTAGAATTTGGGAT+TGG + chr2.1:43329181-43329200 MS.gene75882:intron 35.0%
! TTTTGATCTTCTTCAGATGG+TGG - chr2.1:43331207-43331226 None:intergenic 35.0%
!! ACTCCGTTGTTATTTCCTTT+AGG + chr2.1:43329732-43329751 MS.gene75882:intron 35.0%
!! GAAAACCAGGTATTGAAAGT+AGG + chr2.1:43332768-43332787 MS.gene75882:CDS 35.0%
!!! CGAAACCTTTTTCAATCAAG+TGG + chr2.1:43330741-43330760 MS.gene75882:CDS 35.0%
AAGTTGGAAAGACTCCATGA+GGG + chr2.1:43330771-43330790 MS.gene75882:CDS 40.0%
ACTGCATTAAGTGTGCATAG+GGG - chr2.1:43330477-43330496 None:intergenic 40.0%
AGCATAGAAAGCAAGAGAAC+CGG - chr2.1:43331103-43331122 None:intergenic 40.0%
AGGCAAGAGATTGAGAAACT+TGG + chr2.1:43332846-43332865 MS.gene75882:CDS 40.0%
ATGACTGAGGAATATGGTGA+AGG + chr2.1:43330700-43330719 MS.gene75882:CDS 40.0%
ATGCTTCTAATGAGAGCTTC+TGG - chr2.1:43332560-43332579 None:intergenic 40.0%
ATGGTGGCAAAACTGATTGA+TGG + chr2.1:43331570-43331589 MS.gene75882:CDS 40.0%
ATTAGGCAGGAAATCATTGC+CGG + chr2.1:43331081-43331100 MS.gene75882:CDS 40.0%
CAAATGTGTAGTGCTCAAGA+AGG + chr2.1:43332942-43332961 MS.gene75882:CDS 40.0%
CAACTACTTCCAATGCAGAA+GGG + chr2.1:43331249-43331268 MS.gene75882:CDS 40.0%
CAAGAGATTGAGAAACTTGG+TGG + chr2.1:43332849-43332868 MS.gene75882:CDS 40.0%
CAGTCTCAATCTTCATTGAC+AGG - chr2.1:43329352-43329371 None:intergenic 40.0%
CATCAAATGTTGTGTGCCTA+TGG + chr2.1:43330656-43330675 MS.gene75882:CDS 40.0%
CCCAAATAAATTTGGGTCAG+TGG - chr2.1:43330884-43330903 None:intergenic 40.0%
CTCAGTCATTTCAAGATGCT+CGG - chr2.1:43330689-43330708 None:intergenic 40.0%
CTCGTTGCAAAATTCTGCTA+CGG + chr2.1:43330613-43330632 MS.gene75882:CDS 40.0%
CTGACCCAAATTTATTTGGG+TGG + chr2.1:43330884-43330903 MS.gene75882:CDS 40.0%
GAACTGCATTAAGTGTGCAT+AGG - chr2.1:43330479-43330498 None:intergenic 40.0%
GAGGACCACTTGATTGAAAA+AGG - chr2.1:43330749-43330768 None:intergenic 40.0%
GATGTCTTTCCATCTTCACA+AGG + chr2.1:43329913-43329932 MS.gene75882:CDS 40.0%
GATTGAAAAAGGTTTCGGCT+TGG - chr2.1:43330738-43330757 None:intergenic 40.0%
GGGTCTAATAAGAATGGACA+AGG + chr2.1:43332149-43332168 MS.gene75882:intron 40.0%
GTCTGATACTAGAAAGCAAC+CGG - chr2.1:43332673-43332692 None:intergenic 40.0%
TATTCACTCAGGCCAACAAA+TGG - chr2.1:43331843-43331862 None:intergenic 40.0%
TCAACTACTTCCAATGCAGA+AGG + chr2.1:43331248-43331267 MS.gene75882:CDS 40.0%
TCAAGTTTGGAGAAACGGAT+CGG + chr2.1:43331345-43331364 MS.gene75882:CDS 40.0%
TCATGGAGTCTTTCCAACTT+CGG - chr2.1:43330771-43330790 None:intergenic 40.0%
TCCAAACTTGATATGCAGGA+GGG - chr2.1:43331336-43331355 None:intergenic 40.0%
TCGGTTAGCAAACAGAACAA+TGG + chr2.1:43332966-43332985 MS.gene75882:CDS 40.0%
TCTTGATCATTTCCTTGCCA+TGG + chr2.1:43331464-43331483 MS.gene75882:CDS 40.0%
TGATAGCTGTCATGGAATCT+CGG + chr2.1:43331055-43331074 MS.gene75882:CDS 40.0%
TTCAACGCACTCTCTTTGAT+TGG + chr2.1:43330007-43330026 MS.gene75882:intron 40.0%
TTCCTCTGATTCAGAAGCTT+TGG - chr2.1:43330542-43330561 None:intergenic 40.0%
TTCGATACTGCAATGCTTCT+AGG + chr2.1:43331888-43331907 MS.gene75882:intron 40.0%
! AAACTTGGTGGTAAGGCAAA+AGG + chr2.1:43332861-43332880 MS.gene75882:CDS 40.0%
! AAGTTTAGATTGGTGGTACG+AGG + chr2.1:43330996-43331015 MS.gene75882:CDS 40.0%
! ACAAATCAAAGAGAGTGTGC+TGG + chr2.1:43330101-43330120 MS.gene75882:intron 40.0%
! ATCAATCAGTTTTGCCACCA+TGG - chr2.1:43331571-43331590 None:intergenic 40.0%
! GATTGAGAAACTTGGTGGTA+AGG + chr2.1:43332854-43332873 MS.gene75882:CDS 40.0%
! GTGGAATGGAATAAGTACTG+GGG + chr2.1:43330957-43330976 MS.gene75882:CDS 40.0%
!! ACCTTACGTCGATTTAAACC+AGG - chr2.1:43331138-43331157 None:intergenic 40.0%
!! AGAAAGAGTGCTCAAACATG+AGG + chr2.1:43332826-43332845 MS.gene75882:CDS 40.0%
!! TAAGAGGTTGATAGCTGTCA+TGG + chr2.1:43331047-43331066 MS.gene75882:CDS 40.0%
!!! AACGTTTTACAAAGGTGCCA+AGG - chr2.1:43332291-43332310 None:intergenic 40.0%
AAGGATCATCAACAAGCGCT+TGG + chr2.1:43332880-43332899 MS.gene75882:CDS 45.0%
AATGTAGTCTCACCCATGGT+TGG + chr2.1:43332494-43332513 MS.gene75882:intron 45.0%
ACAAATACAGAGGGCGAGTT+TGG - chr2.1:43330422-43330441 None:intergenic 45.0%
ACATGCAAATTGCCATCGCT+GGG - chr2.1:43329489-43329508 None:intergenic 45.0%
ACCACCTGTAATCTGATCCA+TGG - chr2.1:43331484-43331503 None:intergenic 45.0%
ACCGGCCACCCAAATAAATT+TGG - chr2.1:43330892-43330911 None:intergenic 45.0%
AGAGCAACTATGCAGGCTAA+TGG + chr2.1:43332530-43332549 MS.gene75882:CDS 45.0%
AGGATCATCAACAAGCGCTT+GGG + chr2.1:43332881-43332900 MS.gene75882:CDS 45.0%
ATAGCTGTCATGGAATCTCG+GGG + chr2.1:43331057-43331076 MS.gene75882:CDS 45.0%
ATTCACCTTCACGACATTCC+TGG + chr2.1:43330571-43330590 MS.gene75882:CDS 45.0%
CAATGTGAAGCTCTTCAGCT+TGG - chr2.1:43330825-43330844 None:intergenic 45.0%
CACCTCTGACTAGGAGTTAA+GGG + chr2.1:43329533-43329552 MS.gene75882:intron 45.0%
CAGAAAGAGAGCAACTATGC+AGG + chr2.1:43332523-43332542 MS.gene75882:CDS 45.0%
CAGCTTCGTACTTCAATAGC+CGG + chr2.1:43332651-43332670 MS.gene75882:CDS 45.0%
CATTGAATCGCTTGCAGCAA+AGG + chr2.1:43330855-43330874 MS.gene75882:CDS 45.0%
CCAAACTTGATATGCAGGAG+GGG - chr2.1:43331335-43331354 None:intergenic 45.0%
CCATCCCTACTTTCAATACC+TGG - chr2.1:43332776-43332795 None:intergenic 45.0%
CCATCTTCATCAATCGAGCA+TGG - chr2.1:43331513-43331532 None:intergenic 45.0%
CCATGCTCGATTGATGAAGA+TGG + chr2.1:43331510-43331529 MS.gene75882:CDS 45.0%
CCCAAATTTATTTGGGTGGC+CGG + chr2.1:43330888-43330907 MS.gene75882:CDS 45.0%
CCGGCCACCCAAATAAATTT+GGG - chr2.1:43330891-43330910 None:intergenic 45.0%
CCTGTTTGGTCTACTTCGAA+CGG + chr2.1:43331290-43331309 MS.gene75882:CDS 45.0%
CGAGCATCTTGAAATGACTG+AGG + chr2.1:43330687-43330706 MS.gene75882:CDS 45.0%
CTCATAGGTTCTGTACGACT+GGG + chr2.1:43329858-43329877 MS.gene75882:intron 45.0%
CTCCAAACTTGATATGCAGG+AGG - chr2.1:43331337-43331356 None:intergenic 45.0%
CTGTAATCTGATCCATGGCA+AGG - chr2.1:43331479-43331498 None:intergenic 45.0%
CTTGCCATGGATCAGATTAC+AGG + chr2.1:43331477-43331496 MS.gene75882:CDS 45.0%
GAAGTTGGAAAGACTCCATG+AGG + chr2.1:43330770-43330789 MS.gene75882:CDS 45.0%
GACCAAACAGGAACTTCGTT+TGG - chr2.1:43331281-43331300 None:intergenic 45.0%
GAGTTGTGTCGAAGAAACTC+GGG + chr2.1:43332904-43332923 MS.gene75882:CDS 45.0%
GATAGCTGTCATGGAATCTC+GGG + chr2.1:43331056-43331075 MS.gene75882:CDS 45.0%
GATGAAGATGGCCAGTTGAT+CGG + chr2.1:43331522-43331541 MS.gene75882:CDS 45.0%
GCAGAGCAAGTTCATGTAAC+TGG - chr2.1:43329584-43329603 None:intergenic 45.0%
GCCTGGTTTAAATCGACGTA+AGG + chr2.1:43331134-43331153 MS.gene75882:CDS 45.0%
GGAGTTGTGTCGAAGAAACT+CGG + chr2.1:43332903-43332922 MS.gene75882:CDS 45.0%
GGGGTTCACTCGTAAAATCA+TGG - chr2.1:43331316-43331335 None:intergenic 45.0%
GTCCAAACGAAGTTCCTGTT+TGG + chr2.1:43331276-43331295 MS.gene75882:CDS 45.0%
GTGTAGTGCTCAAGAAGGAT+CGG + chr2.1:43332947-43332966 MS.gene75882:CDS 45.0%
TAAACCATCATCCAAAGGCC+TGG - chr2.1:43331676-43331695 None:intergenic 45.0%
TACATGCAAATTGCCATCGC+TGG - chr2.1:43329490-43329509 None:intergenic 45.0%
TCAAACCTGTGACGATGTTC+TGG + chr2.1:43330798-43330817 MS.gene75882:CDS 45.0%
TCAACGGGATCCTATGTTCA+GGG - chr2.1:43331956-43331975 None:intergenic 45.0%
TCCACAAAACACTTCCACCA+GGG - chr2.1:43330942-43330961 None:intergenic 45.0%
TCTCATAGGTTCTGTACGAC+TGG + chr2.1:43329857-43329876 MS.gene75882:intron 45.0%
TGCCAAAGCTTCTGAATCAG+AGG + chr2.1:43330537-43330556 MS.gene75882:CDS 45.0%
TGTGTATACCACCTCTGACT+AGG + chr2.1:43329524-43329543 MS.gene75882:intron 45.0%
TTCACCTTCACGACATTCCT+GGG + chr2.1:43330572-43330591 MS.gene75882:CDS 45.0%
TTCCACAAAACACTTCCACC+AGG - chr2.1:43330943-43330962 None:intergenic 45.0%
TTCCCTTAACTCCTAGTCAG+AGG - chr2.1:43329538-43329557 None:intergenic 45.0%
TTTATTTGGGTGGCCGGTAT+TGG + chr2.1:43330894-43330913 MS.gene75882:CDS 45.0%
TTTCTGACTCCACCAACCAT+GGG - chr2.1:43332509-43332528 None:intergenic 45.0%
! AGTTTTGCCACCATGGTGAT+GGG - chr2.1:43331564-43331583 None:intergenic 45.0%
! TTCCCTTTGCTCTCTAGAAG+CGG + chr2.1:43330496-43330515 MS.gene75882:CDS 45.0%
!! CCAGGTATTGAAAGTAGGGA+TGG + chr2.1:43332773-43332792 MS.gene75882:CDS 45.0%
!! GGGATTGGTTGGTGTTCTTA+TGG + chr2.1:43329196-43329215 MS.gene75882:intron 45.0%
!! TACCTGGTTTTCCTTGACTG+CGG - chr2.1:43332760-43332779 None:intergenic 45.0%
!!! GGTGGAAGTGTTTTGTGGAA+TGG + chr2.1:43330943-43330962 MS.gene75882:CDS 45.0%
ACAGGAACTTCGTTTGGACC+AGG - chr2.1:43331275-43331294 None:intergenic 50.0%
AGCTGATGCATTTCAGCGTC+AGG + chr2.1:43328830-43328849 MS.gene75882:CDS 50.0%
ATCAAGTGGTCCTCCGAAGT+TGG + chr2.1:43330755-43330774 MS.gene75882:CDS 50.0%
CAAGTTTCAAGCCCTTGCTG+CGG + chr2.1:43331635-43331654 MS.gene75882:CDS 50.0%
CCACCTCTGACTAGGAGTTA+AGG + chr2.1:43329532-43329551 MS.gene75882:intron 50.0%
CCCCTCCTGCATATCAAGTT+TGG + chr2.1:43331332-43331351 MS.gene75882:CDS 50.0%
CCGTTCGAAGTAGACCAAAC+AGG - chr2.1:43331293-43331312 None:intergenic 50.0%
CCTTAACTCCTAGTCAGAGG+TGG - chr2.1:43329535-43329554 None:intergenic 50.0%
CCTTTCATTCTGTGCAGCGT+GGG - chr2.1:43332586-43332605 None:intergenic 50.0%
CGGCGTGAAACTCGAACTTA+CGG + chr2.1:43330633-43330652 MS.gene75882:CDS 50.0%
CGGCTATTGAAGTACGAAGC+TGG - chr2.1:43332653-43332672 None:intergenic 50.0%
CTTTCTGACTCCACCAACCA+TGG - chr2.1:43332510-43332529 None:intergenic 50.0%
GCAGCAAGGGCTTGAAACTT+GGG - chr2.1:43331636-43331655 None:intergenic 50.0%
GCAGCTTGATCAAGCTGCTT+TGG + chr2.1:43331371-43331390 MS.gene75882:CDS 50.0%
GCCAACAAATGGCTCAACTG+TGG - chr2.1:43331832-43331851 None:intergenic 50.0%
GCCACAGTTGAGCCATTTGT+TGG + chr2.1:43331828-43331847 MS.gene75882:intron 50.0%
GCCATGGATCAGATTACAGG+TGG + chr2.1:43331480-43331499 MS.gene75882:CDS 50.0%
GCTGATGCATTTCAGCGTCA+GGG + chr2.1:43328831-43328850 MS.gene75882:CDS 50.0%
GCTTCTTATTGTCCCAGCGA+TGG + chr2.1:43329474-43329493 MS.gene75882:intron 50.0%
GGATCATCAACAAGCGCTTG+GGG + chr2.1:43332882-43332901 MS.gene75882:CDS 50.0%
GTCAACGGGATCCTATGTTC+AGG - chr2.1:43331957-43331976 None:intergenic 50.0%
TATGCCAGGCCTTTGGATGA+TGG + chr2.1:43331669-43331688 MS.gene75882:CDS 50.0%
TCACCTTCACGACATTCCTG+GGG + chr2.1:43330573-43330592 MS.gene75882:CDS 50.0%
TGGAGTCTTTCCAACTTCGG+AGG - chr2.1:43330768-43330787 None:intergenic 50.0%
TTGGTCCAGAACATCGTCAC+AGG - chr2.1:43330806-43330825 None:intergenic 50.0%
! ACAGGTTTGAAGTGCCCTCA+TGG - chr2.1:43330788-43330807 None:intergenic 50.0%
! ACTCCGCTTCTAGAGAGCAA+AGG - chr2.1:43330502-43330521 None:intergenic 50.0%
! CAGTTTTGCCACCATGGTGA+TGG - chr2.1:43331565-43331584 None:intergenic 50.0%
! CTCCGCTTCTAGAGAGCAAA+GGG - chr2.1:43330501-43330520 None:intergenic 50.0%
! GATTGATGGTTACCTCGCAG+AGG + chr2.1:43331584-43331603 MS.gene75882:CDS 50.0%
! GGTTTGGTCGGATCAAACGA+GGG + chr2.1:43332723-43332742 MS.gene75882:CDS 50.0%
! TCATGGAATCTCGGGGCATT+AGG + chr2.1:43331064-43331083 MS.gene75882:CDS 50.0%
!! GCTCTCTAGAAGCGGAGTTT+TGG + chr2.1:43330504-43330523 MS.gene75882:CDS 50.0%
!! TCAAATGTTTTTGCCCCCCC+AGG - chr2.1:43330592-43330611 None:intergenic 50.0%
!! TGGTTTGGTCGGATCAAACG+AGG + chr2.1:43332722-43332741 MS.gene75882:CDS 50.0%
ACCTTCACGACATTCCTGGG+GGG + chr2.1:43330575-43330594 MS.gene75882:CDS 55.0%
ACTTCCAATGCAGAAGGGCC+TGG + chr2.1:43331254-43331273 MS.gene75882:CDS 55.0%
CACCTTCACGACATTCCTGG+GGG + chr2.1:43330574-43330593 MS.gene75882:CDS 55.0%
CCCACGCTGCACAGAATGAA+AGG + chr2.1:43332583-43332602 MS.gene75882:CDS 55.0%
CGCAGCAAGGGCTTGAAACT+TGG - chr2.1:43331637-43331656 None:intergenic 55.0%
CGGATCAAACGAGGGTGGTT+GGG + chr2.1:43332731-43332750 MS.gene75882:CDS 55.0%
GCCTTTCATTCTGTGCAGCG+TGG - chr2.1:43332587-43332606 None:intergenic 55.0%
GCGAAGGTGATCCGATCAAC+TGG - chr2.1:43331536-43331555 None:intergenic 55.0%
GTAGTCTCACCCATGGTTGG+TGG + chr2.1:43332497-43332516 MS.gene75882:intron 55.0%
GTCCGCAGTCAAGGAAAACC+AGG + chr2.1:43332755-43332774 MS.gene75882:CDS 55.0%
TCCAAAGGCCTGGCATACTC+TGG - chr2.1:43331666-43331685 None:intergenic 55.0%
TCCAGAGTATGCCAGGCCTT+TGG + chr2.1:43331662-43331681 MS.gene75882:CDS 55.0%
TCGGATCAAACGAGGGTGGT+TGG + chr2.1:43332730-43332749 MS.gene75882:CDS 55.0%
TTCGCTGACACCCATCACCA+TGG + chr2.1:43331551-43331570 MS.gene75882:CDS 55.0%
TTGGTCGGATCAAACGAGGG+TGG + chr2.1:43332726-43332745 MS.gene75882:CDS 55.0%
!! AAGTCGGGTACTGGACTCAC+CGG - chr2.1:43331163-43331182 None:intergenic 55.0%
!! ATGGTGATGGGTGTCAGCGA+AGG - chr2.1:43331552-43331571 None:intergenic 55.0%
!!! GCCCTGGTGGAAGTGTTTTG+TGG + chr2.1:43330938-43330957 MS.gene75882:CDS 55.0%
ACTTCCACCAGGGCTCTGCA+AGG - chr2.1:43330932-43330951 None:intergenic 60.0%
CCTTCACGACATTCCTGGGG+GGG + chr2.1:43330576-43330595 MS.gene75882:CDS 60.0%
CGGCTGTTCCAGAGTATGCC+AGG + chr2.1:43331655-43331674 MS.gene75882:CDS 60.0%
CGGGATCCTATGTTCAGGGC+CGG - chr2.1:43331952-43331971 None:intergenic 60.0%
CTACCTCCGGCCCTGAACAT+AGG + chr2.1:43331943-43331962 MS.gene75882:intron 60.0%
CTTCCACCAGGGCTCTGCAA+GGG - chr2.1:43330931-43330950 None:intergenic 60.0%
GATCCTATGTTCAGGGCCGG+AGG - chr2.1:43331949-43331968 None:intergenic 60.0%
GATGCTCGGCAGCACACCAT+AGG - chr2.1:43330675-43330694 None:intergenic 60.0%
GCTGACACCCATCACCATGG+TGG + chr2.1:43331554-43331573 MS.gene75882:CDS 60.0%
GGACCACCACGCTCCAATAC+CGG - chr2.1:43330910-43330929 None:intergenic 60.0%
GGTGGAGATACCAAAGCCGC+CGG - chr2.1:43331189-43331208 None:intergenic 60.0%
GTGGAGATACCAAAGCCGCC+GGG - chr2.1:43331188-43331207 None:intergenic 60.0%
TGGACCAGGCCCTTCTGCAT+TGG - chr2.1:43331261-43331280 None:intergenic 60.0%
TGGAGATACCAAAGCCGCCG+GGG - chr2.1:43331187-43331206 None:intergenic 60.0%
TTCAGCGTCAGGGTCAAGCC+TGG + chr2.1:43328841-43328860 MS.gene75882:CDS 60.0%
! GGAATCTCGGGGCATTAGGC+AGG + chr2.1:43331068-43331087 MS.gene75882:CDS 60.0%
!! ACTCTGGAACAGCCGCAGCA+AGG - chr2.1:43331650-43331669 None:intergenic 60.0%
!! CTCTGGAACAGCCGCAGCAA+GGG - chr2.1:43331649-43331668 None:intergenic 60.0%
CCCCCCCAGGAATGTCGTGA+AGG - chr2.1:43330579-43330598 None:intergenic 65.0%
TGGTTGGGCGTCCGCAGTCA+AGG + chr2.1:43332746-43332765 MS.gene75882:CDS 65.0%
! CATCTGGGGCAACCTCTGCG+AGG - chr2.1:43331599-43331618 None:intergenic 65.0%
! GTCCAGTACCCGACTTGCCC+CGG + chr2.1:43331167-43331186 MS.gene75882:CDS 65.0%
! TGGCCGGTATTGGAGCGTGG+TGG + chr2.1:43330904-43330923 MS.gene75882:CDS 65.0%
CAAAGCCGCCGGGGCAAGTC+GGG - chr2.1:43331178-43331197 None:intergenic 70.0%
CCAAAGCCGCCGGGGCAAGT+CGG - chr2.1:43331179-43331198 None:intergenic 70.0%
GGTCCCTTGCAGAGCCCTGG+TGG + chr2.1:43330925-43330944 MS.gene75882:CDS 70.0%
GGTGGTCCCTTGCAGAGCCC+TGG + chr2.1:43330922-43330941 MS.gene75882:CDS 70.0%
! CAGTACCCGACTTGCCCCGG+CGG + chr2.1:43331170-43331189 MS.gene75882:CDS 70.0%
! GGGTGGCCGGTATTGGAGCG+TGG + chr2.1:43330901-43330920 MS.gene75882:CDS 70.0%
CGCCGGGGCAAGTCGGGTAC+TGG - chr2.1:43331172-43331191 None:intergenic 75.0%
! CCGACTTGCCCCGGCGGCTT+TGG + chr2.1:43331176-43331195 MS.gene75882:CDS 75.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 43328804 43333088 43328804 ID=MS.gene75882
chr2.1 mRNA 43328804 43333088 43328804 ID=MS.gene75882.t1;Parent=MS.gene75882
chr2.1 exon 43328804 43328862 43328804 ID=MS.gene75882.t1.exon1;Parent=MS.gene75882.t1
chr2.1 CDS 43328804 43328862 43328804 ID=cds.MS.gene75882.t1;Parent=MS.gene75882.t1
chr2.1 exon 43329865 43329934 43329865 ID=MS.gene75882.t1.exon2;Parent=MS.gene75882.t1
chr2.1 CDS 43329865 43329934 43329865 ID=cds.MS.gene75882.t1;Parent=MS.gene75882.t1
chr2.1 exon 43330496 43331722 43330496 ID=MS.gene75882.t1.exon3;Parent=MS.gene75882.t1
chr2.1 CDS 43330496 43331722 43330496 ID=cds.MS.gene75882.t1;Parent=MS.gene75882.t1
chr2.1 exon 43332501 43333088 43332501 ID=MS.gene75882.t1.exon4;Parent=MS.gene75882.t1
chr2.1 CDS 43332501 43333088 43332501 ID=cds.MS.gene75882.t1;Parent=MS.gene75882.t1
Gene Sequence

>MS.gene75882

ATGGCTTGTGTGAAATTGGGTTCTAAAGCTGATGCATTTCAGCGTCAGGGTCAAGCCTGGTATTTATCTACCCTTATCCTTTTTATGCTCTTTTAATTTATGCTCGTTTTCGTTATTTGTTGTTATATTTTCTATTGAAATGTGAATTTTTTTTGAAGTGTTTGTGATTGTGAATTTTAGGATTTGGAAGAACATGTTTTTCTGCTTTAAGTTGTTGGTTTACTGATAGGTTACTTGGCATGTTTCTTTTAGTGTTTATCAGTGGTTAAGAATATTTTAACTCATGTTGAAGTGTAGTGAATGCATATTGTTTGAAGAAATGATTCTGTTAAGGTCTTATACTCATTTCTGTTCCTTGATAGATACTAGATAGATCCCTCTATGTAGAATTTGGGATTGGTTGGTGTTCTTATGGACTACATGTAAATCTCTGAGAGTACAAAAGTGTTTTATGAGTTCTTTCTTATTTTCTGATTGATATGATTTGATTAAACAATATATATGAGTGGTGAAAATCTGTAATCTGTGCATTTGGTAGAAACAGACCTGTCAATGAAGATTGAGACTGTGATTTTTATTCTTAACTTGACAAGTATTCAATTTAATTTATTTTCTTTGTGGTCTTTAGGAAGTAATTTATAAATTATTATTTCATTTTCAATTTTGTTTTGCTTCTTATTGTCCCAGCGATGGCAATTTGCATGTATAAGGCTCTTGCATTGTGTATACCACCTCTGACTAGGAGTTAAGGGAACCTTTTGTATGATAGGCCAAAGTCCAGTTACATGAACTTGCTCTGCATTCCTATTACTTAGTGCTATATTTTTTGGTTGTTCCATACGTTTATTTCATTCATACTACCCTTATGATACTTCAAACTCACATTTGTTCAAGATATGTTTATTATATGATGGTGAATCGGTGATTGACTCCGTTGTTATTTCCTTTAGGTCATTTTAATTGAGACTTCACAACATAACATGAATGAAATGCATTGTGTTTGTTGAATTTGTTGTTGAAGTTTTGCCACTTAATGTTTAATATTTTCATTGCTCTCATAGGTTCTGTACGACTGGGCTTCCCAGCGATATAGTTGTTGAAGTTGGTGAGATGTCTTTCCATCTTCACAAGGTATATGTTAATGTCTTTCTATATGATTTTTTTGAGATGAGTGTTAGAAACACACTCTCTTAACACACACTTTTCAACGCACTCTCTTTGATTGGTTAAAATTCATATGCGTCCCATTAAATCATTTGGGTCTCATATAAATTTGGGGGAACCCTTGTGAATTTTAACAAATCAAAGAGAGTGTGCTGGAAAGTGTGTGTTGTTAGCGTTGTTCATTTAGAGGACTGTTTGCAACAGACTCTCTAACACACATCTAGCTGATGCACTATTAATACGGATGTTATTAGTTTGCTCAAATTCTTAGTTCTTTTTTTTAAATGATGTTTGGCTGACTTGGAATTCGTCAAAGTTTGCATGAAGATGTGCGTATCAGAGTTTTTCTGTTGTACATTCGAAACATAATTTTTTTAATATGTTATGAAATCTGCTTTTAACTTATTATTCATTCAAAATACTCAATGTTGCTACTGTTTGGAAAATAATTCCAAACTCGCCCTCTGTATTTGTATATACGCTTTTGTGAACATAAAATAATCTGACCCCTATGCACACTTAATGCAGTTCCCTTTGCTCTCTAGAAGCGGAGTTTTGGAAAGATCAATTGCCAAAGCTTCTGAATCAGAGGAAGAATGCGTCATTCACCTTCACGACATTCCTGGGGGGGCAAAAACATTTGAACTCGTTGCAAAATTCTGCTACGGCGTGAAACTCGAACTTACGGCATCAAATGTTGTGTGCCTATGGTGTGCTGCCGAGCATCTTGAAATGACTGAGGAATATGGTGAAGGTAATCTTATTTCCCAAGCCGAAACCTTTTTCAATCAAGTGGTCCTCCGAAGTTGGAAAGACTCCATGAGGGCACTTCAAACCTGTGACGATGTTCTGGACCAAGCTGAAGAGCTTCACATTGTGAAGAGATGCATTGAATCGCTTGCAGCAAAGGCATCCACTGACCCAAATTTATTTGGGTGGCCGGTATTGGAGCGTGGTGGTCCCTTGCAGAGCCCTGGTGGAAGTGTTTTGTGGAATGGAATAAGTACTGGGGCAAGACCAAAGAATACAAGTTTAGATTGGTGGTACGAGGATGTAGCAAATTTGAGTTTACCGATTTATAAGAGGTTGATAGCTGTCATGGAATCTCGGGGCATTAGGCAGGAAATCATTGCCGGTTCTCTTGCTTTCTATGCTAAAACGTATTTGCCTGGTTTAAATCGACGTAAGGTTTCCGGTGAGTCCAGTACCCGACTTGCCCCGGCGGCTTTGGTATCTCCACCATCTGAAGAAGATCAAAAAATTCTTCTGGAAGAGATTGATCAACTACTTCCAATGCAGAAGGGCCTGGTCCAAACGAAGTTCCTGTTTGGTCTACTTCGAACGGCCATGATTTTACGAGTGAACCCCTCCTGCATATCAAGTTTGGAGAAACGGATCGGAATGCAGCTTGATCAAGCTGCTTTGGAAGATCTCTTGATGCCAAATTTCTCGTATTCAATGGAGACACTTTACAATGTCGACTGTGTGCAAAGAATTCTTGATCATTTCCTTGCCATGGATCAGATTACAGGTGGTGCGTCTCCATGCTCGATTGATGAAGATGGCCAGTTGATCGGATCACCTTCGCTGACACCCATCACCATGGTGGCAAAACTGATTGATGGTTACCTCGCAGAGGTTGCCCCAGATGTTAACTTAAAACTTCCCAAGTTTCAAGCCCTTGCTGCGGCTGTTCCAGAGTATGCCAGGCCTTTGGATGATGGTTTATATCGTGCCATAGATATTTACTTGAAGGTATGTAACTAGAGCAAGTCTGTTTATATCATTCTATAGTTAGTTTTAATATGCTTCGGTATGGTATATATTATAATGGGTTTATCTTATGGTTACATGCATCATGCCACAGTTGAGCCATTTGTTGGCCTGAGTGAATATTATATATGTTTGTCAAATAATATTTTCGATACTGCAATGCTTCTAGGTGTTAAATTTTTTACTTTTTATTAAAAAGTTACTACCTCCGGCCCTGAACATAGGATCCCGTTGACTAAATCACAAAAACTTTAAGAATGTTGGTATTGTTTTACAAGTTTACTCTTTAGGATAGAGAATTGGTTTATATTTCAAACAACTGTTTTTATTACATGTTGTAGAAAAATATGCAACATAATTAGGGGTACGTTGTTAAAGAAATAATTAACGCAGTTGAAAATTTAATAGGGGTCTAATAAGAATGGACAAGGGAAAATATAGATAGGGTTTAGGGATGGAGATAGTACTTGTTGCGCATGTTTAATTTTCATCCGTGATTTGAGTGACCTTACTTTACCCAAAGCATATTTGATTGAAAATCACATATCCTTGGCACCTTTGTAAAACGTTTTCAAACTATATTGTTGGCTTAAATAATTTTTTTAATGCTTGCAGATATACCAGTTTATGCTTTTATTCCCAATCCTTGAAAATACAGAAAATTTTCTTTGTTGTTTTGGTTTTAGTTACTGTTATGCTTATTGATGTTGGTTCTAACTACTGTCTACTGATTTAATTTTGCTCTCGTAAAAAAATGTAGTCTCACCCATGGTTGGTGGAGTCAGAAAGAGAGCAACTATGCAGGCTAATGGACTGCCAGAAGCTCTCATTAGAAGCATGCACCCACGCTGCACAGAATGAAAGGCTCCCCATTAGAATCATAGTTCAAGTTCTATTTTTTGAGCAGCTCCAGCTTCGTACTTCAATAGCCGGTTGCTTTCTAGTATCAGACAATCTTGATGGATCAAGAAATTTAAGAAGTGGTTTGGTCGGATCAAACGAGGGTGGTTGGGCGTCCGCAGTCAAGGAAAACCAGGTATTGAAAGTAGGGATGGATAACATGAGGATGAGGGTATCTGAGCTCGAGAAAGAGTGCTCAAACATGAGGCAAGAGATTGAGAAACTTGGTGGTAAGGCAAAAGGATCATCAACAAGCGCTTGGGGAGTTGTGTCGAAGAAACTCGGGTTTAAGATAAAGTCTCAAATGTGTAGTGCTCAAGAAGGATCGGTTAGCAAACAGAACAATGGACATAATAATGTTGAGAAGTTGAAGGACAGAAATGTAAAGCATAATAGAAGTTCTTCTATCAGTGACAAAGGATCAGTCTCTTCAATTATTCCTTCTTAG
Protein sequence

>MS.gene75882.t1

MACVKLGSKADAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVLERSIAKASESEEECVIHLHDIPGGAKTFELVAKFCYGVKLELTASNVVCLWCAAEHLEMTEEYGEGNLISQAETFFNQVVLRSWKDSMRALQTCDDVLDQAEELHIVKRCIESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKNTSLDWWYEDVANLSLPIYKRLIAVMESRGIRQEIIAGSLAFYAKTYLPGLNRRKVSGESSTRLAPAALVSPPSEEDQKILLEEIDQLLPMQKGLVQTKFLFGLLRTAMILRVNPSCISSLEKRIGMQLDQAALEDLLMPNFSYSMETLYNVDCVQRILDHFLAMDQITGGASPCSIDEDGQLIGSPSLTPITMVAKLIDGYLAEVAPDVNLKLPKFQALAAAVPEYARPLDDGLYRAIDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIVQVLFFEQLQLRTSIAGCFLVSDNLDGSRNLRSGLVGSNEGGWASAVKENQVLKVGMDNMRMRVSELEKECSNMRQEIEKLGGKAKGSSTSAWGVVSKKLGFKIKSQMCSAQEGSVSKQNNGHNNVEKLKDRNVKHNRSSSISDKGSVSSIIPS