Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75883.t1 | XP_003595493.2 | 95.1 | 637 | 29 | 1 | 1 | 637 | 1 | 635 | 0.00E+00 | 1126.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75883.t1 | Q93YU8 | 29.5 | 441 | 295 | 4 | 208 | 635 | 355 | 792 | 8.8e-47 | 189.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75883.t1 | G7IGH9 | 95.1 | 637 | 29 | 1 | 1 | 637 | 1 | 635 | 0.0e+00 | 1126.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050904 | MS.gene75883 | -0.801523 | 8.65E-49 | -1.69E-46 |
MS.gene053108 | MS.gene75883 | 0.825711 | 4.04E-54 | -1.69E-46 |
MS.gene056618 | MS.gene75883 | 0.847662 | 1.00E-59 | -1.69E-46 |
MS.gene05960 | MS.gene75883 | 0.818202 | 2.22E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75883.t1 | MTR_2g048360 | 95.133 | 637 | 29 | 1 | 1 | 637 | 1 | 635 | 0.0 | 1163 |
MS.gene75883.t1 | MTR_5g022530 | 34.598 | 448 | 275 | 8 | 199 | 635 | 195 | 635 | 1.64e-67 | 233 |
MS.gene75883.t1 | MTR_7g081705 | 32.579 | 442 | 277 | 9 | 208 | 635 | 405 | 839 | 8.97e-57 | 206 |
MS.gene75883.t1 | MTR_8g006850 | 31.320 | 447 | 284 | 7 | 208 | 635 | 277 | 719 | 6.64e-51 | 188 |
MS.gene75883.t1 | MTR_3g109450 | 29.336 | 467 | 297 | 10 | 188 | 633 | 248 | 702 | 1.21e-45 | 173 |
MS.gene75883.t1 | MTR_2g102050 | 27.962 | 422 | 283 | 7 | 213 | 621 | 325 | 738 | 2.96e-37 | 148 |
MS.gene75883.t1 | MTR_1g112850 | 26.949 | 449 | 292 | 10 | 207 | 626 | 273 | 714 | 8.73e-34 | 138 |
MS.gene75883.t1 | MTR_4g012430 | 28.655 | 342 | 223 | 7 | 213 | 546 | 128 | 456 | 2.29e-31 | 129 |
MS.gene75883.t1 | MTR_3g088190 | 25.966 | 466 | 293 | 11 | 208 | 636 | 454 | 904 | 9.04e-28 | 119 |
MS.gene75883.t1 | MTR_4g127620 | 24.786 | 351 | 234 | 8 | 196 | 525 | 323 | 664 | 3.64e-25 | 111 |
MS.gene75883.t1 | MTR_8g091250 | 31.048 | 248 | 153 | 5 | 293 | 529 | 382 | 622 | 4.86e-25 | 110 |
MS.gene75883.t1 | MTR_5g098980 | 30.855 | 269 | 169 | 4 | 297 | 552 | 438 | 702 | 2.19e-24 | 108 |
MS.gene75883.t1 | MTR_3g078830 | 30.833 | 240 | 150 | 4 | 293 | 520 | 444 | 679 | 8.43e-24 | 107 |
MS.gene75883.t1 | MTR_5g087740 | 30.417 | 240 | 151 | 4 | 293 | 520 | 428 | 663 | 9.04e-24 | 107 |
MS.gene75883.t1 | MTR_2g036920 | 26.944 | 360 | 215 | 10 | 201 | 524 | 496 | 843 | 8.90e-22 | 100 |
MS.gene75883.t1 | MTR_2g036920 | 26.944 | 360 | 215 | 10 | 201 | 524 | 467 | 814 | 1.01e-21 | 100 |
MS.gene75883.t1 | MTR_3g115120 | 23.362 | 351 | 233 | 7 | 296 | 637 | 362 | 685 | 2.12e-19 | 93.2 |
MS.gene75883.t1 | MTR_3g096950 | 28.017 | 232 | 155 | 4 | 298 | 523 | 436 | 661 | 5.25e-13 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75883.t1 | AT2G34670 | 42.777 | 713 | 295 | 17 | 1 | 635 | 1 | 678 | 1.47e-150 | 451 |
MS.gene75883.t1 | AT2G34670 | 43.304 | 575 | 216 | 16 | 1 | 500 | 1 | 540 | 4.55e-115 | 355 |
MS.gene75883.t1 | AT3G51290 | 34.234 | 444 | 276 | 5 | 199 | 635 | 191 | 625 | 5.68e-72 | 244 |
MS.gene75883.t1 | AT3G51290 | 34.234 | 444 | 276 | 5 | 199 | 635 | 191 | 625 | 3.74e-71 | 246 |
MS.gene75883.t1 | AT3G51290 | 33.333 | 444 | 274 | 6 | 199 | 635 | 191 | 619 | 2.01e-66 | 229 |
MS.gene75883.t1 | AT1G02110 | 31.837 | 490 | 311 | 8 | 158 | 635 | 221 | 699 | 6.75e-59 | 210 |
MS.gene75883.t1 | AT3G60320 | 28.798 | 441 | 298 | 4 | 208 | 635 | 355 | 792 | 3.38e-48 | 181 |
MS.gene75883.t1 | AT1G52320 | 27.626 | 438 | 289 | 9 | 210 | 631 | 25 | 450 | 1.98e-39 | 151 |
MS.gene75883.t1 | AT1G52320 | 27.626 | 438 | 289 | 9 | 210 | 631 | 25 | 450 | 1.98e-39 | 151 |
MS.gene75883.t1 | AT1G52320 | 27.064 | 436 | 294 | 7 | 210 | 631 | 351 | 776 | 3.71e-39 | 154 |
MS.gene75883.t1 | AT1G52320 | 27.064 | 436 | 294 | 7 | 210 | 631 | 351 | 776 | 3.71e-39 | 154 |
MS.gene75883.t1 | AT1G52320 | 27.064 | 436 | 294 | 7 | 210 | 631 | 328 | 753 | 3.78e-39 | 154 |
MS.gene75883.t1 | AT5G25590 | 27.335 | 439 | 293 | 8 | 209 | 631 | 330 | 758 | 3.53e-37 | 148 |
MS.gene75883.t1 | AT1G77500 | 31.054 | 351 | 204 | 7 | 208 | 532 | 449 | 787 | 4.93e-31 | 130 |
MS.gene75883.t1 | AT1G21740 | 25.761 | 493 | 303 | 11 | 187 | 637 | 476 | 947 | 6.80e-29 | 123 |
MS.gene75883.t1 | AT4G35240 | 25.000 | 456 | 259 | 11 | 208 | 629 | 419 | 825 | 4.97e-27 | 117 |
MS.gene75883.t1 | AT4G35240 | 25.000 | 456 | 259 | 11 | 208 | 629 | 419 | 825 | 4.97e-27 | 117 |
MS.gene75883.t1 | AT4G35240 | 25.000 | 456 | 259 | 11 | 208 | 629 | 419 | 825 | 5.28e-27 | 117 |
MS.gene75883.t1 | AT4G35240 | 25.000 | 456 | 259 | 11 | 208 | 629 | 419 | 825 | 5.28e-27 | 117 |
MS.gene75883.t1 | AT2G27090 | 33.463 | 257 | 150 | 7 | 293 | 536 | 424 | 672 | 6.82e-26 | 113 |
MS.gene75883.t1 | AT2G27090 | 33.463 | 257 | 150 | 7 | 293 | 536 | 424 | 672 | 6.82e-26 | 113 |
MS.gene75883.t1 | AT2G17110 | 28.723 | 376 | 215 | 12 | 213 | 553 | 314 | 671 | 1.46e-23 | 106 |
MS.gene75883.t1 | AT4G39790 | 27.897 | 233 | 152 | 3 | 293 | 513 | 371 | 599 | 3.44e-20 | 95.5 |
MS.gene75883.t1 | AT4G30130 | 29.032 | 248 | 158 | 4 | 293 | 524 | 397 | 642 | 1.47e-17 | 87.4 |
MS.gene75883.t1 | AT4G30130 | 29.032 | 248 | 158 | 4 | 293 | 524 | 397 | 642 | 1.47e-17 | 87.4 |
MS.gene75883.t1 | AT1G20530 | 27.473 | 273 | 170 | 8 | 297 | 552 | 310 | 571 | 8.69e-17 | 84.7 |
MS.gene75883.t1 | AT2G19090 | 28.800 | 250 | 158 | 4 | 293 | 524 | 478 | 725 | 3.14e-16 | 83.2 |
MS.gene75883.t1 | AT5G54480 | 22.932 | 266 | 169 | 7 | 298 | 548 | 401 | 645 | 1.74e-11 | 67.8 |
Find 153 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTTTCCACTTGCTTCTTTA+AGG | 0.121977 | 2.1:-43342661 | None:intergenic |
TGAAACAACTTCATCCATTT+TGG | 0.154541 | 2.1:+43341682 | MS.gene75883:CDS |
TTATACACGCTGAGGCTTTC+AGG | 0.162797 | 2.1:-43338601 | None:intergenic |
TCGATCAAATGTTGAGAAAT+TGG | 0.186597 | 2.1:+43341625 | MS.gene75883:CDS |
CTCGGCCTGTTGAGCAATTA+TGG | 0.187743 | 2.1:-43342469 | None:intergenic |
AAGTGTGAAAGCAGATTATT+TGG | 0.231735 | 2.1:+43342680 | MS.gene75883:CDS |
GGCGGGGAAGGCGGGGCTTC+AGG | 0.257567 | 2.1:-43338149 | None:intergenic |
CTTCCTCTCAAACTCCAATT+TGG | 0.258099 | 2.1:-43341543 | None:intergenic |
CAGTGGGAGCTTGGGCTTGA+TGG | 0.280020 | 2.1:+43342174 | MS.gene75883:CDS |
CGCTTTCAAATAAGCTAATA+AGG | 0.286610 | 2.1:-43338048 | None:intergenic |
TTCATCCTCAAATTCAGTTT+TGG | 0.303718 | 2.1:-43338381 | None:intergenic |
AGTCGTTTGAGGAGGAGAAT+TGG | 0.309003 | 2.1:+43338351 | MS.gene75883:CDS |
TTGAGAGTGAGGCTTCTTAT+TGG | 0.311587 | 2.1:+43342016 | MS.gene75883:CDS |
GTCGTTTGAGGAGGAGAATT+GGG | 0.314868 | 2.1:+43338352 | MS.gene75883:CDS |
TTCATCTATAAGTTCCAAAA+TGG | 0.322487 | 2.1:-43341696 | None:intergenic |
ACTCTTCTGCGGCAGAATTC+TGG | 0.331983 | 2.1:+43338662 | MS.gene75883:CDS |
ATCAGGCGGCGGGGAAGGCG+GGG | 0.344022 | 2.1:-43338156 | None:intergenic |
AATCAGGCGGCGGGGAAGGC+GGG | 0.350796 | 2.1:-43338157 | None:intergenic |
TTACATCAGCTTCTGAATCT+TGG | 0.353547 | 2.1:-43338406 | None:intergenic |
AGAAAACTCGGCGTCATCTT+TGG | 0.357338 | 2.1:-43339613 | None:intergenic |
GAATTAGACTTTGCCTCTAC+TGG | 0.357502 | 2.1:+43338122 | MS.gene75883:CDS |
GCTAAATACCCTTGCAGAAC+TGG | 0.365688 | 2.1:-43339550 | None:intergenic |
AGAGGGTGAGGACATTGATT+TGG | 0.376255 | 2.1:+43341586 | MS.gene75883:CDS |
AAATCAGGCGGCGGGGAAGG+CGG | 0.382061 | 2.1:-43338158 | None:intergenic |
TTTATGAAATAGCGGATGCC+TGG | 0.385105 | 2.1:-43342622 | None:intergenic |
CGGCAGTTAATGCAACCAAC+TGG | 0.389360 | 2.1:-43341730 | None:intergenic |
AGAAAAGGAGGCAGCGGCGG+AGG | 0.389892 | 2.1:-43338185 | None:intergenic |
GAAAGCCTCAGCGTGTATAA+AGG | 0.389967 | 2.1:+43338604 | MS.gene75883:CDS |
ATCTGTGAACAGTGGGAGCT+TGG | 0.397020 | 2.1:+43342165 | MS.gene75883:CDS |
ACGTTCCATAATTGCTCAAC+AGG | 0.401754 | 2.1:+43342464 | MS.gene75883:CDS |
GGAGGAGGGAATTACCAAAT+TGG | 0.413638 | 2.1:+43341529 | MS.gene75883:intron |
AGCGGCGGAGGTGGTAAATC+AGG | 0.416274 | 2.1:-43338173 | None:intergenic |
CACTGAGGTTACTCAGCTGC+TGG | 0.417437 | 2.1:-43341933 | None:intergenic |
AGAAGTTGTAGAGTCGTTTG+AGG | 0.425062 | 2.1:+43338340 | MS.gene75883:CDS |
CGCTTTCATTGCCATTCCTT+AGG | 0.430652 | 2.1:-43342119 | None:intergenic |
CATCTGCTGCAAATTGATCA+AGG | 0.433756 | 2.1:+43338278 | MS.gene75883:CDS |
GGGAAGGCGGGGCTTCAGGC+AGG | 0.447316 | 2.1:-43338145 | None:intergenic |
TCTGTGAACAGTGGGAGCTT+GGG | 0.453467 | 2.1:+43342166 | MS.gene75883:CDS |
AGGGTAAGAAGTACCTTATC+TGG | 0.459508 | 2.1:-43342201 | None:intergenic |
AATCGCAACAAGAGTATGTA+AGG | 0.460182 | 2.1:+43342064 | MS.gene75883:CDS |
GGTAAATCAGGCGGCGGGGA+AGG | 0.462696 | 2.1:-43338161 | None:intergenic |
CAATGAGCTCCCGGCCTGCA+TGG | 0.466880 | 2.1:-43339648 | None:intergenic |
AAAGCTATTCCCGTGATGAT+TGG | 0.468773 | 2.1:+43338527 | MS.gene75883:CDS |
ATCACGTAGCGGGAAGCAAC+CGG | 0.469892 | 2.1:+43338439 | MS.gene75883:CDS |
AGTGGGAGCTTGGGCTTGAT+GGG | 0.470747 | 2.1:+43342175 | MS.gene75883:CDS |
TCATCAACTGGTTCTTTGAC+CGG | 0.480247 | 2.1:-43338458 | None:intergenic |
CCCGGCCTGCATGGTTCACT+AGG | 0.481968 | 2.1:-43339639 | None:intergenic |
GGGTATTTAGCGTACTATCA+TGG | 0.482670 | 2.1:+43339562 | MS.gene75883:CDS |
TTTCACTGATGCACCGCCGC+AGG | 0.485850 | 2.1:-43341664 | None:intergenic |
TTTGAAGATGAGGGTGATGA+AGG | 0.485921 | 2.1:+43342588 | MS.gene75883:CDS |
GCAGAGGAACTATCATCAAC+TGG | 0.489604 | 2.1:-43338470 | None:intergenic |
GAAACTTTACAAGGCAGTAA+AGG | 0.489711 | 2.1:+43339704 | MS.gene75883:CDS |
CAGTTGGTTGCATTAACTGC+CGG | 0.490052 | 2.1:+43341731 | MS.gene75883:CDS |
AGTTGTAGAGTCGTTTGAGG+AGG | 0.494301 | 2.1:+43338343 | MS.gene75883:CDS |
ACATCTCTTCGTGTCACTGA+TGG | 0.494531 | 2.1:+43342758 | MS.gene75883:CDS |
TTATGAAATAGCGGATGCCT+GGG | 0.495642 | 2.1:-43342621 | None:intergenic |
CCTAGTGAACCATGCAGGCC+GGG | 0.499393 | 2.1:+43339639 | MS.gene75883:CDS |
TCCTAGTGAACCATGCAGGC+CGG | 0.503939 | 2.1:+43339638 | MS.gene75883:CDS |
TGCTTCCTCTCAAGCAATTG+AGG | 0.505979 | 2.1:+43342791 | MS.gene75883:CDS |
GCTTGATGGGTTACCAGATA+AGG | 0.507842 | 2.1:+43342188 | MS.gene75883:CDS |
AATAGCCTCAATTGCTTGAG+AGG | 0.509454 | 2.1:-43342796 | None:intergenic |
AGAAACCAAAACTGAATTTG+AGG | 0.510649 | 2.1:+43338376 | MS.gene75883:CDS |
GCGGAGGTGCTCGAAGTCCC+TGG | 0.515708 | 2.1:+43342536 | MS.gene75883:CDS |
AAAGTCTAATTCTAATGTAT+CGG | 0.518544 | 2.1:-43338111 | None:intergenic |
TACAATTCAGTTTGAGAGTG+AGG | 0.520111 | 2.1:+43342005 | MS.gene75883:CDS |
TTGAGCAATTATGGAACGTA+TGG | 0.520980 | 2.1:-43342460 | None:intergenic |
ATTGATGAGGATGGAAGGGT+TGG | 0.521693 | 2.1:+43337960 | MS.gene75883:CDS |
TGAACTAAACTTTGAAGATG+AGG | 0.521842 | 2.1:+43342578 | MS.gene75883:CDS |
ATTGCCATTCCTTAGGCAGT+TGG | 0.523231 | 2.1:-43342112 | None:intergenic |
GGAGGTGGTAAATCAGGCGG+CGG | 0.525320 | 2.1:-43338167 | None:intergenic |
AAAGGAGGCAGCGGCGGAGG+TGG | 0.526432 | 2.1:-43338182 | None:intergenic |
AGTTGGTTGCATTAACTGCC+GGG | 0.528298 | 2.1:+43341732 | MS.gene75883:CDS |
TTCAGCTTACCAACTGCCTA+AGG | 0.530755 | 2.1:+43342103 | MS.gene75883:CDS |
CCGTGATGATTGGTAGAAGC+GGG | 0.533019 | 2.1:+43338537 | MS.gene75883:CDS |
ATCGTTGCTATTTCAACCTG+TGG | 0.535495 | 2.1:+43338310 | MS.gene75883:CDS |
CAGAATTCAGAATTGTATTG+TGG | 0.537342 | 2.1:-43341960 | None:intergenic |
GGCAGTTAATGCAACCAACT+GGG | 0.539937 | 2.1:-43341729 | None:intergenic |
CAAGTATTGATGAGGATGGA+AGG | 0.542254 | 2.1:+43337955 | MS.gene75883:CDS |
ACAACTTCTACTTTATCCAC+AGG | 0.542390 | 2.1:-43338326 | None:intergenic |
GGCTTCAGGCAGGCCAGTAG+AGG | 0.542481 | 2.1:-43338135 | None:intergenic |
GAGGTGGTAAATCAGGCGGC+GGG | 0.543333 | 2.1:-43338166 | None:intergenic |
ATGTAAGGACCCTCAGTAAG+TGG | 0.544051 | 2.1:+43342079 | MS.gene75883:CDS |
GTGTGGGAAGATCACGTAGC+GGG | 0.550776 | 2.1:+43338429 | MS.gene75883:CDS |
ACAGTTAGTTTGTAATAGAG+AGG | 0.552074 | 2.1:+43338013 | MS.gene75883:CDS |
TTCAGAAGCTGATGTAAGTG+TGG | 0.554428 | 2.1:+43338412 | MS.gene75883:CDS |
GCATGGATGCCATCAGTCGC+AGG | 0.557421 | 2.1:+43341900 | MS.gene75883:CDS |
AGTGTGGCACAATGAGCTCC+CGG | 0.562495 | 2.1:-43339657 | None:intergenic |
CATAATTGCTCAACAGGCCG+AGG | 0.562768 | 2.1:+43342470 | MS.gene75883:CDS |
CTAGTCCTAGTGAACCATGC+AGG | 0.563303 | 2.1:+43339634 | MS.gene75883:CDS |
AATGAAATACTAGAGAATGA+TGG | 0.563894 | 2.1:+43338239 | MS.gene75883:CDS |
GGCGTCATCTTTGGTGAACG+TGG | 0.564520 | 2.1:-43339604 | None:intergenic |
AAGTATTGATGAGGATGGAA+GGG | 0.564904 | 2.1:+43337956 | MS.gene75883:CDS |
GCAAGAAAAGGAGGCAGCGG+CGG | 0.566054 | 2.1:-43338188 | None:intergenic |
TCAGCAAGAAAAGGAGGCAG+CGG | 0.569066 | 2.1:-43338191 | None:intergenic |
TAATTCTAATGTATCGGACT+CGG | 0.570082 | 2.1:-43338105 | None:intergenic |
ATCAGTGACACGAAGAGATG+TGG | 0.570760 | 2.1:-43342756 | None:intergenic |
GAACTAAACTTTGAAGATGA+GGG | 0.571616 | 2.1:+43342579 | MS.gene75883:CDS |
TTACCAAATTGGAGTTTGAG+AGG | 0.577960 | 2.1:+43341540 | MS.gene75883:CDS |
TCTGAGGTTATCAAGAGTCA+TGG | 0.581424 | 2.1:-43342724 | None:intergenic |
AGATCAGTGCCTGCGACTGA+TGG | 0.582431 | 2.1:-43341909 | None:intergenic |
TTAGCGTACTATCATGGAGT+AGG | 0.582628 | 2.1:+43339568 | MS.gene75883:CDS |
TTGAAAGCGTTGAGGAACAC+CGG | 0.583723 | 2.1:+43338062 | MS.gene75883:CDS |
AGAAGCCTTAAAGAAGCAAG+TGG | 0.583882 | 2.1:+43342656 | MS.gene75883:CDS |
TGGTAGAAGCGGGAGAACAT+TGG | 0.584904 | 2.1:+43338547 | MS.gene75883:CDS |
CAAGAGAACCAGTTCTGCAA+GGG | 0.586453 | 2.1:+43339542 | MS.gene75883:CDS |
CATATGCAAGGAAAGGAAGA+AGG | 0.587629 | 2.1:+43337983 | MS.gene75883:CDS |
CCCGTGATGATTGGTAGAAG+CGG | 0.592602 | 2.1:+43338536 | MS.gene75883:CDS |
ACTGAGGTTACTCAGCTGCT+GGG | 0.593378 | 2.1:-43341932 | None:intergenic |
TAGAAGCGGGAGAACATTGG+AGG | 0.594332 | 2.1:+43338550 | MS.gene75883:CDS |
CTTACCAACTGCCTAAGGAA+TGG | 0.597362 | 2.1:+43342108 | MS.gene75883:CDS |
GTAGGTTGTCACAAATGTGG+AGG | 0.597775 | 2.1:+43341872 | MS.gene75883:intron |
TCGCACCATCTGTGAACAGT+GGG | 0.598576 | 2.1:+43342158 | MS.gene75883:CDS |
TTATCAAGTATTGATGAGGA+TGG | 0.602269 | 2.1:+43337951 | MS.gene75883:CDS |
GCAAGAGAACCAGTTCTGCA+AGG | 0.603472 | 2.1:+43339541 | MS.gene75883:CDS |
CCGCTTCTACCAATCATCAC+GGG | 0.604064 | 2.1:-43338536 | None:intergenic |
TTTGTAGGTTGTCACAAATG+TGG | 0.604629 | 2.1:+43341869 | MS.gene75883:intron |
GAACTGCCTAAGTGTGGCAC+CGG | 0.605074 | 2.1:-43338081 | None:intergenic |
AAGCTGAATCCACTTACTGA+GGG | 0.607524 | 2.1:-43342088 | None:intergenic |
CCCGCTTCTACCAATCATCA+CGG | 0.607752 | 2.1:-43338537 | None:intergenic |
AAGCTCCCACTGTTCACAGA+TGG | 0.608574 | 2.1:-43342163 | None:intergenic |
TCAGAAGCTGATGTAAGTGT+GGG | 0.608804 | 2.1:+43338413 | MS.gene75883:CDS |
TAGCTTATTTGAAAGCGTTG+AGG | 0.611440 | 2.1:+43338054 | MS.gene75883:CDS |
TGGAAGGGTTGGCATATGCA+AGG | 0.624183 | 2.1:+43337971 | MS.gene75883:CDS |
TTCACTAGGACTAGAAAACT+CGG | 0.624299 | 2.1:-43339625 | None:intergenic |
CTAAGGAATGGCAATGAAAG+CGG | 0.626651 | 2.1:+43342120 | MS.gene75883:CDS |
GATGTGGAAGTCTAGTTCTG+AGG | 0.627153 | 2.1:-43342740 | None:intergenic |
CTCGGTGAACTGCCTAAGTG+TGG | 0.628590 | 2.1:-43338087 | None:intergenic |
TCTAAACAAAGTAATAGCAG+AGG | 0.632255 | 2.1:-43338486 | None:intergenic |
GGGTTGGCATATGCAAGGAA+AGG | 0.637575 | 2.1:+43337976 | MS.gene75883:CDS |
TGTCATATAATGTAGGAGGA+GGG | 0.638178 | 2.1:+43341515 | MS.gene75883:intron |
TCCGCTATTTCATAAAATAG+CGG | 0.639131 | 2.1:+43342629 | MS.gene75883:CDS |
ATGAAGGTAATATAAGCCCC+AGG | 0.640592 | 2.1:+43342604 | MS.gene75883:CDS |
CTGATTTGATAAGCCTGCGG+CGG | 0.640810 | 2.1:+43341651 | MS.gene75883:CDS |
TGGAACGTATGGATAACAGA+AGG | 0.642185 | 2.1:-43342449 | None:intergenic |
TTGTATTGTGGTTATCACTG+AGG | 0.645449 | 2.1:-43341948 | None:intergenic |
GTTCTTATTGATATCAGCAG+CGG | 0.646022 | 2.1:+43338635 | MS.gene75883:CDS |
GGCAGAGAAGAAACTTTACA+AGG | 0.650354 | 2.1:+43339695 | MS.gene75883:CDS |
GATTTCCTTTATACACGCTG+AGG | 0.652486 | 2.1:-43338609 | None:intergenic |
TAAGCTGAATCCACTTACTG+AGG | 0.654495 | 2.1:-43342089 | None:intergenic |
GGCGGAGGTGGTAAATCAGG+CGG | 0.655924 | 2.1:-43338170 | None:intergenic |
TATGAAATAGCGGATGCCTG+GGG | 0.656539 | 2.1:-43342620 | None:intergenic |
GCAGTTAATGCAACCAACTG+GGG | 0.660306 | 2.1:-43341728 | None:intergenic |
AGGTGGTAAATCAGGCGGCG+GGG | 0.661404 | 2.1:-43338165 | None:intergenic |
AACTTGAAAGAAAGTTGCGG+AGG | 0.663528 | 2.1:+43342520 | MS.gene75883:CDS |
AGAAGCGGGAGAACATTGGA+GGG | 0.666824 | 2.1:+43338551 | MS.gene75883:CDS |
GGAACACCGGTGCCACACTT+AGG | 0.668962 | 2.1:+43338075 | MS.gene75883:CDS |
TGTGTTATCAAGTATTGATG+AGG | 0.669531 | 2.1:+43337947 | MS.gene75883:CDS |
TTCGCACCATCTGTGAACAG+TGG | 0.670588 | 2.1:+43342157 | MS.gene75883:CDS |
CAAATGTGGAGGATAATGCA+TGG | 0.676138 | 2.1:+43341883 | MS.gene75883:CDS |
AGATGGTGCGAATAGAAGAG+TGG | 0.685672 | 2.1:-43342146 | None:intergenic |
AGTCTGATTTGATAAGCCTG+CGG | 0.688684 | 2.1:+43341648 | MS.gene75883:CDS |
GCAGCGGAGATACTCTTCTG+CGG | 0.753633 | 2.1:+43338651 | MS.gene75883:CDS |
AGTGTGGGAAGATCACGTAG+CGG | 0.767022 | 2.1:+43338428 | MS.gene75883:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGAAATTTCAATAATTTTAA+AGG | - | chr2.1:43338718-43338737 | None:intergenic | 10.0% |
!! | AAATTTCTTTATGATAGATT+AGG | + | chr2.1:43338730-43338749 | MS.gene75883:intron | 15.0% |
!! | ATAAGCTATAAATGTTATTA+TGG | - | chr2.1:43338914-43338933 | None:intergenic | 15.0% |
!! | ATTTAATGCAAAAGATATTT+AGG | + | chr2.1:43339889-43339908 | MS.gene75883:intron | 15.0% |
!! | GAAAACAAAAAAAATTACAA+GGG | + | chr2.1:43341071-43341090 | MS.gene75883:intron | 15.0% |
!! | TGAAAACAAAAAAAATTACA+AGG | + | chr2.1:43341070-43341089 | MS.gene75883:intron | 15.0% |
!! | TTATTTACTTACTTTACATT+TGG | + | chr2.1:43341465-43341484 | MS.gene75883:intron | 15.0% |
!! | TTTAATGCAAAAGATATTTA+GGG | + | chr2.1:43339890-43339909 | MS.gene75883:intron | 15.0% |
!! | AAAGTCTAATTCTAATGTAT+CGG | - | chr2.1:43338114-43338133 | None:intergenic | 20.0% |
!! | ATATGTAGAATAAGTTTGAT+AGG | - | chr2.1:43339398-43339417 | None:intergenic | 20.0% |
!! | TAATGAAAAACATTAGTTGT+TGG | - | chr2.1:43340044-43340063 | None:intergenic | 20.0% |
!! | TAGGCTTATTTAAATTCAAA+AGG | + | chr2.1:43341299-43341318 | MS.gene75883:intron | 20.0% |
!! | TATTTAGGGAAAAATAAATC+AGG | + | chr2.1:43339904-43339923 | MS.gene75883:intron | 20.0% |
!! | TGAAAAAAAGTTATTGAAAC+AGG | - | chr2.1:43339213-43339232 | None:intergenic | 20.0% |
!!! | CTGTTTATTGGTTTTATTAT+TGG | - | chr2.1:43339734-43339753 | None:intergenic | 20.0% |
!!! | GGAATGATAATATTTTTTTC+TGG | + | chr2.1:43342384-43342403 | MS.gene75883:intron | 20.0% |
!!! | GGTTATAGTCTTATATATTA+TGG | + | chr2.1:43341320-43341339 | MS.gene75883:intron | 20.0% |
!!! | TCATTTATTTATCTGGTTTT+TGG | + | chr2.1:43341247-43341266 | MS.gene75883:intron | 20.0% |
!!! | TGGAAAAATGTAAATTCTTT+TGG | + | chr2.1:43342252-43342271 | MS.gene75883:intron | 20.0% |
!!! | TTTGAAGTCATTTATTTATC+TGG | + | chr2.1:43341240-43341259 | MS.gene75883:intron | 20.0% |
!!! | TTTTAATACTCTTAAAACTG+AGG | + | chr2.1:43338847-43338866 | MS.gene75883:intron | 20.0% |
!!! | TTTTCAAGCAAATATTAATG+TGG | - | chr2.1:43339179-43339198 | None:intergenic | 20.0% |
! | AAAAACTTGAAAGAAAGTTG+CGG | + | chr2.1:43342517-43342536 | MS.gene75883:CDS | 25.0% |
! | AAATCAGGAACAAAATTTCA+AGG | + | chr2.1:43339919-43339938 | MS.gene75883:intron | 25.0% |
! | AATGAAATACTAGAGAATGA+TGG | + | chr2.1:43338239-43338258 | MS.gene75883:CDS | 25.0% |
! | ATAAATGACTTCAAAGACAA+AGG | - | chr2.1:43341235-43341254 | None:intergenic | 25.0% |
! | ATATTAGAAAACTGCAAACA+TGG | + | chr2.1:43339828-43339847 | MS.gene75883:intron | 25.0% |
! | CACACTCAAAAAATTATATG+CGG | + | chr2.1:43339674-43339693 | MS.gene75883:CDS | 25.0% |
! | CTAAGAAAGAATAAAAGCAA+AGG | - | chr2.1:43341282-43341301 | None:intergenic | 25.0% |
! | GTTCAAATGTCATATAATGT+AGG | + | chr2.1:43341508-43341527 | MS.gene75883:intron | 25.0% |
! | TTATATCTGATTCATATCCT+AGG | + | chr2.1:43341820-43341839 | MS.gene75883:intron | 25.0% |
! | TTCATCTATAAGTTCCAAAA+TGG | - | chr2.1:43341699-43341718 | None:intergenic | 25.0% |
! | TTTCGAAATGTTTGAATGTA+TGG | + | chr2.1:43338883-43338902 | MS.gene75883:intron | 25.0% |
!! | AGACAACATTCTAAAAAAGT+TGG | + | chr2.1:43342494-43342513 | MS.gene75883:CDS | 25.0% |
!! | AGATGTGTAAATTTTATGAG+CGG | + | chr2.1:43342363-43342382 | MS.gene75883:intron | 25.0% |
!! | TTGGCAAAACTTTTATGTAT+GGG | + | chr2.1:43342271-43342290 | MS.gene75883:intron | 25.0% |
!! | TTTGGCAAAACTTTTATGTA+TGG | + | chr2.1:43342270-43342289 | MS.gene75883:intron | 25.0% |
!!! | AAAACTGTTGTTTGTTTTGT+AGG | + | chr2.1:43341854-43341873 | MS.gene75883:intron | 25.0% |
!!! | AGAAACCTTTTTTATGATGT+TGG | - | chr2.1:43340480-43340499 | None:intergenic | 25.0% |
!!! | AGTTTTTTAAAGCAAAACCT+AGG | - | chr2.1:43341840-43341859 | None:intergenic | 25.0% |
!!! | CTTTGCTTTTATTCTTTCTT+AGG | + | chr2.1:43341280-43341299 | MS.gene75883:intron | 25.0% |
!!! | GTTGGTTTTTTTTTTAGCAA+GGG | - | chr2.1:43340026-43340045 | None:intergenic | 25.0% |
!!! | TGTTGGTTTTTTTTTTAGCA+AGG | - | chr2.1:43340027-43340046 | None:intergenic | 25.0% |
!!! | TGTTTGTTTCTTTTGATCAA+AGG | + | chr2.1:43341427-43341446 | MS.gene75883:intron | 25.0% |
AAAGGAGAAAGATAGAACAT+AGG | - | chr2.1:43341217-43341236 | None:intergenic | 30.0% | |
AAATCTCATATTCATAGCTC+TGG | - | chr2.1:43339341-43339360 | None:intergenic | 30.0% | |
AAATGATAACCACTATCCTT+AGG | - | chr2.1:43339098-43339117 | None:intergenic | 30.0% | |
AAGTCTATCATAACGCATAT+AGG | - | chr2.1:43339427-43339446 | None:intergenic | 30.0% | |
AAGTGTGAAAGCAGATTATT+TGG | + | chr2.1:43342680-43342699 | MS.gene75883:CDS | 30.0% | |
AATCTTTAATTAGTGCCCTA+AGG | + | chr2.1:43339079-43339098 | MS.gene75883:intron | 30.0% | |
AATGATAACCACTATCCTTA+GGG | - | chr2.1:43339097-43339116 | None:intergenic | 30.0% | |
AATTTCAAGGCATATTGTTC+AGG | + | chr2.1:43339932-43339951 | MS.gene75883:intron | 30.0% | |
AGAAACCAAAACTGAATTTG+AGG | + | chr2.1:43338376-43338395 | MS.gene75883:CDS | 30.0% | |
AGAAATTCTTCACGGAATTA+TGG | + | chr2.1:43340726-43340745 | MS.gene75883:intron | 30.0% | |
AGTCTATCATAACGCATATA+GGG | - | chr2.1:43339426-43339445 | None:intergenic | 30.0% | |
CAAATGTCATATAATGTAGG+AGG | + | chr2.1:43341511-43341530 | MS.gene75883:intron | 30.0% | |
CAAATTCTAGATTCTTCCAT+TGG | - | chr2.1:43340416-43340435 | None:intergenic | 30.0% | |
CAGAATTCAGAATTGTATTG+TGG | - | chr2.1:43341963-43341982 | None:intergenic | 30.0% | |
CATATTTACTGTCAATCTTG+AGG | - | chr2.1:43340088-43340107 | None:intergenic | 30.0% | |
CGCTTTCAAATAAGCTAATA+AGG | - | chr2.1:43338051-43338070 | None:intergenic | 30.0% | |
CTCAAGATTGACAGTAAATA+TGG | + | chr2.1:43340086-43340105 | MS.gene75883:intron | 30.0% | |
TAATTCTAATGTATCGGACT+CGG | - | chr2.1:43338108-43338127 | None:intergenic | 30.0% | |
TATATTATGGCTCAATTGAC+TGG | + | chr2.1:43341333-43341352 | MS.gene75883:intron | 30.0% | |
TCGATCAAATGTTGAGAAAT+TGG | + | chr2.1:43341625-43341644 | MS.gene75883:CDS | 30.0% | |
TCTAAACAAAGTAATAGCAG+AGG | - | chr2.1:43338489-43338508 | None:intergenic | 30.0% | |
TGACATTTGAACAATGAGAA+AGG | - | chr2.1:43341500-43341519 | None:intergenic | 30.0% | |
TTCTATCTATCCCTTAGTTA+GGG | + | chr2.1:43341383-43341402 | MS.gene75883:intron | 30.0% | |
! | AAACTCTTTTCAGCAAGAAA+AGG | - | chr2.1:43338203-43338222 | None:intergenic | 30.0% |
! | AAGGCTAAGATTTTTGACAT+CGG | - | chr2.1:43340671-43340690 | None:intergenic | 30.0% |
! | ACGTTCAAAGATGATTTTTC+CGG | + | chr2.1:43340350-43340369 | MS.gene75883:intron | 30.0% |
! | GAACTAAACTTTGAAGATGA+GGG | + | chr2.1:43342579-43342598 | MS.gene75883:CDS | 30.0% |
! | TCAGATTTGAAACATCGTAT+AGG | - | chr2.1:43339060-43339079 | None:intergenic | 30.0% |
! | TCCGCTATTTCATAAAATAG+CGG | + | chr2.1:43342629-43342648 | MS.gene75883:CDS | 30.0% |
! | TGAAACAACTTCATCCATTT+TGG | + | chr2.1:43341682-43341701 | MS.gene75883:CDS | 30.0% |
! | TGAACTAAACTTTGAAGATG+AGG | + | chr2.1:43342578-43342597 | MS.gene75883:CDS | 30.0% |
! | TTCATCCTCAAATTCAGTTT+TGG | - | chr2.1:43338384-43338403 | None:intergenic | 30.0% |
!! | ACAGTTAGTTTGTAATAGAG+AGG | + | chr2.1:43338013-43338032 | MS.gene75883:CDS | 30.0% |
!! | ATAACTTGCTGAGAAAAACT+AGG | + | chr2.1:43341024-43341043 | MS.gene75883:intron | 30.0% |
!! | CGTTTATTTTCTGTGTGTAT+GGG | + | chr2.1:43339476-43339495 | MS.gene75883:intron | 30.0% |
!! | GATAGATTAGGTTTTGTCAT+TGG | + | chr2.1:43338742-43338761 | MS.gene75883:intron | 30.0% |
!! | TAACTTGCTGAGAAAAACTA+GGG | + | chr2.1:43341025-43341044 | MS.gene75883:intron | 30.0% |
!! | TCCGCTATTTTATGAAATAG+CGG | - | chr2.1:43342633-43342652 | None:intergenic | 30.0% |
!! | TCGTTTATTTTCTGTGTGTA+TGG | + | chr2.1:43339475-43339494 | MS.gene75883:intron | 30.0% |
!! | TGTGTTATCAAGTATTGATG+AGG | + | chr2.1:43337947-43337966 | MS.gene75883:CDS | 30.0% |
!! | TTATCAAGTATTGATGAGGA+TGG | + | chr2.1:43337951-43337970 | MS.gene75883:CDS | 30.0% |
!!! | ACATTTTTTTTCTTCTGCTC+TGG | + | chr2.1:43339504-43339523 | MS.gene75883:intron | 30.0% |
!!! | CGCATATAATTTTTTGAGTG+TGG | - | chr2.1:43339676-43339695 | None:intergenic | 30.0% |
!!! | GTTTTTTTTTTAGCAAGGGT+CGG | - | chr2.1:43340022-43340041 | None:intergenic | 30.0% |
!!! | TTTTAGAATGTTGTCTTCCT+CGG | - | chr2.1:43342490-43342509 | None:intergenic | 30.0% |
AAACATCAAGCAATGGCTTA+GGG | - | chr2.1:43340864-43340883 | None:intergenic | 35.0% | |
ACAACTTCTACTTTATCCAC+AGG | - | chr2.1:43338329-43338348 | None:intergenic | 35.0% | |
ACTTTCCACTTGCTTCTTTA+AGG | - | chr2.1:43342664-43342683 | None:intergenic | 35.0% | |
AGTGGTGAAGAAATTCTTCA+CGG | + | chr2.1:43340718-43340737 | MS.gene75883:intron | 35.0% | |
ATCGTCATTGAAAAAGCAAG+AGG | + | chr2.1:43341568-43341587 | MS.gene75883:CDS | 35.0% | |
ATGCAGCCCAAAAATATTTG+GGG | - | chr2.1:43339858-43339877 | None:intergenic | 35.0% | |
ATGTCATATAATGTAGGAGG+AGG | + | chr2.1:43341514-43341533 | MS.gene75883:intron | 35.0% | |
ATTCTTCACGGAATTATGGA+TGG | + | chr2.1:43340730-43340749 | MS.gene75883:intron | 35.0% | |
CAAACGAAAGATGGTGAAAA+GGG | - | chr2.1:43341194-43341213 | None:intergenic | 35.0% | |
CAAGGCCAACATCATAAAAA+AGG | + | chr2.1:43340472-43340491 | MS.gene75883:intron | 35.0% | |
CAATATGCTGGACAGTAATT+AGG | + | chr2.1:43339301-43339320 | MS.gene75883:intron | 35.0% | |
CAGCATCATAGACTGTTTAT+TGG | - | chr2.1:43339746-43339765 | None:intergenic | 35.0% | |
CATGCAGCCCAAAAATATTT+GGG | - | chr2.1:43339859-43339878 | None:intergenic | 35.0% | |
CATTTCAGACTACAATATGC+TGG | + | chr2.1:43339289-43339308 | MS.gene75883:intron | 35.0% | |
CGAAATCTGAGAAATATACC+CGG | - | chr2.1:43341753-43341772 | None:intergenic | 35.0% | |
CTTCTATCTATCCCTTAGTT+AGG | + | chr2.1:43341382-43341401 | MS.gene75883:intron | 35.0% | |
GAAACTTTACAAGGCAGTAA+AGG | + | chr2.1:43339704-43339723 | MS.gene75883:CDS | 35.0% | |
GACTGTTTGGATAAGATTCA+AGG | - | chr2.1:43340569-43340588 | None:intergenic | 35.0% | |
GGAAAAATCATCTTTGAACG+TGG | - | chr2.1:43340351-43340370 | None:intergenic | 35.0% | |
GTTCTTATTGATATCAGCAG+CGG | + | chr2.1:43338635-43338654 | MS.gene75883:CDS | 35.0% | |
GTTTCCAATACAGAAAAGAC+AGG | - | chr2.1:43338788-43338807 | None:intergenic | 35.0% | |
TACAATTCAGTTTGAGAGTG+AGG | + | chr2.1:43342005-43342024 | MS.gene75883:CDS | 35.0% | |
TCATGCAGCCCAAAAATATT+TGG | - | chr2.1:43339860-43339879 | None:intergenic | 35.0% | |
TCCACTCTTAACTAACAAGT+TGG | - | chr2.1:43340915-43340934 | None:intergenic | 35.0% | |
TCCATTCGAAAAACAAAGCA+TGG | - | chr2.1:43342236-43342255 | None:intergenic | 35.0% | |
TCGTCATTGAAAAAGCAAGA+GGG | + | chr2.1:43341569-43341588 | MS.gene75883:CDS | 35.0% | |
TGTCATATAATGTAGGAGGA+GGG | + | chr2.1:43341515-43341534 | MS.gene75883:intron | 35.0% | |
TTACATCAGCTTCTGAATCT+TGG | - | chr2.1:43338409-43338428 | None:intergenic | 35.0% | |
TTACCAAATTGGAGTTTGAG+AGG | + | chr2.1:43341540-43341559 | MS.gene75883:CDS | 35.0% | |
TTCACTAGGACTAGAAAACT+CGG | - | chr2.1:43339628-43339647 | None:intergenic | 35.0% | |
TTGAGCAATTATGGAACGTA+TGG | - | chr2.1:43342463-43342482 | None:intergenic | 35.0% | |
TTGCGCTAAACACTTCTTAT+TGG | + | chr2.1:43342308-43342327 | MS.gene75883:intron | 35.0% | |
TTGTATTGTGGTTATCACTG+AGG | - | chr2.1:43341951-43341970 | None:intergenic | 35.0% | |
TTTGTAGGTTGTCACAAATG+TGG | + | chr2.1:43341869-43341888 | MS.gene75883:intron | 35.0% | |
! | AATCGCAACAAGAGTATGTA+AGG | + | chr2.1:43342064-43342083 | MS.gene75883:CDS | 35.0% |
! | CAATCATTTTCCAGAGAGAA+CGG | + | chr2.1:43340783-43340802 | MS.gene75883:intron | 35.0% |
! | GCTCAATTGACTGGTATTTT+TGG | + | chr2.1:43341342-43341361 | MS.gene75883:intron | 35.0% |
! | TTTACCCATGGAGTATTCTT+TGG | - | chr2.1:43340447-43340466 | None:intergenic | 35.0% |
!! | AAGTATTGATGAGGATGGAA+GGG | + | chr2.1:43337956-43337975 | MS.gene75883:CDS | 35.0% |
!! | CATAGTTGGTAAAAACCAGA+CGG | + | chr2.1:43340942-43340961 | MS.gene75883:intron | 35.0% |
!! | TAGCTTATTTGAAAGCGTTG+AGG | + | chr2.1:43338054-43338073 | MS.gene75883:CDS | 35.0% |
!! | TCCAACTTGTTAGTTAAGAG+TGG | + | chr2.1:43340911-43340930 | MS.gene75883:intron | 35.0% |
!! | TTTATGATGTTGGCCTTGTA+TGG | - | chr2.1:43340470-43340489 | None:intergenic | 35.0% |
!!! | AAATATTTTTGGGCTGCATG+AGG | + | chr2.1:43339859-43339878 | MS.gene75883:intron | 35.0% |
!!! | AATATTTTTGGGCTGCATGA+GGG | + | chr2.1:43339860-43339879 | MS.gene75883:intron | 35.0% |
!!! | CAGAAGGTTTTTTATCGCAT+TGG | - | chr2.1:43342436-43342455 | None:intergenic | 35.0% |
!!! | GAAAAGAGTTTTGTTCACGT+TGG | + | chr2.1:43338212-43338231 | MS.gene75883:CDS | 35.0% |
!!! | GATAGGTGTTTTGATATCCA+TGG | - | chr2.1:43340203-43340222 | None:intergenic | 35.0% |
!!! | TTTTTTCTGGCACTTTGATG+TGG | + | chr2.1:43342397-43342416 | MS.gene75883:intron | 35.0% |
AAAGCTATTCCCGTGATGAT+TGG | + | chr2.1:43338527-43338546 | MS.gene75883:CDS | 40.0% | |
AACAATTGCCACCCTAACTA+AGG | - | chr2.1:43341397-43341416 | None:intergenic | 40.0% | |
AACTTGAAAGAAAGTTGCGG+AGG | + | chr2.1:43342520-43342539 | MS.gene75883:CDS | 40.0% | |
AAGCTGAATCCACTTACTGA+GGG | - | chr2.1:43342091-43342110 | None:intergenic | 40.0% | |
AATAGCCTCAATTGCTTGAG+AGG | - | chr2.1:43342799-43342818 | None:intergenic | 40.0% | |
AATCGATGTTCTTGGTGAGA+TGG | + | chr2.1:43340822-43340841 | MS.gene75883:intron | 40.0% | |
AATTAGTGCCCTAAGGATAG+TGG | + | chr2.1:43339086-43339105 | MS.gene75883:intron | 40.0% | |
ACAATTGCCACCCTAACTAA+GGG | - | chr2.1:43341396-43341415 | None:intergenic | 40.0% | |
ACGAACCAAAGAATACTCCA+TGG | + | chr2.1:43340439-43340458 | MS.gene75883:intron | 40.0% | |
ACGAGATTTACCATGCTTTC+GGG | + | chr2.1:43340262-43340281 | MS.gene75883:intron | 40.0% | |
ACGTTCCATAATTGCTCAAC+AGG | + | chr2.1:43342464-43342483 | MS.gene75883:CDS | 40.0% | |
AGAAGCCTTAAAGAAGCAAG+TGG | + | chr2.1:43342656-43342675 | MS.gene75883:CDS | 40.0% | |
AGAAGTTGTAGAGTCGTTTG+AGG | + | chr2.1:43338340-43338359 | MS.gene75883:CDS | 40.0% | |
AGAGTTGAAAGTAGGTCCAA+TGG | + | chr2.1:43340397-43340416 | MS.gene75883:intron | 40.0% | |
AGGTTTGCCAAAATCTCATG+AGG | - | chr2.1:43340628-43340647 | None:intergenic | 40.0% | |
ATCTGATTCAGCCATGAGTT+AGG | + | chr2.1:43340973-43340992 | MS.gene75883:intron | 40.0% | |
ATGAAGGTAATATAAGCCCC+AGG | + | chr2.1:43342604-43342623 | MS.gene75883:CDS | 40.0% | |
ATTGAAAAAGCAAGAGGGTG+AGG | + | chr2.1:43341574-43341593 | MS.gene75883:CDS | 40.0% | |
CAAAACACCTATCGATAGTG+TGG | + | chr2.1:43340210-43340229 | MS.gene75883:intron | 40.0% | |
CAAAATCTCATGAGGGTTGT+TGG | - | chr2.1:43340620-43340639 | None:intergenic | 40.0% | |
CAAACATCAAGCAATGGCTT+AGG | - | chr2.1:43340865-43340884 | None:intergenic | 40.0% | |
CAAATGTGGAGGATAATGCA+TGG | + | chr2.1:43341883-43341902 | MS.gene75883:CDS | 40.0% | |
CAGAAAAGACAGGAAGCAAA+AGG | - | chr2.1:43338778-43338797 | None:intergenic | 40.0% | |
CATATGCAAGGAAAGGAAGA+AGG | + | chr2.1:43337983-43338002 | MS.gene75883:CDS | 40.0% | |
CATCTGCTGCAAATTGATCA+AGG | + | chr2.1:43338278-43338297 | MS.gene75883:CDS | 40.0% | |
CCATCTACTACTACTCAGAA+TGG | - | chr2.1:43339144-43339163 | None:intergenic | 40.0% | |
CCATTCTGAGTAGTAGTAGA+TGG | + | chr2.1:43339141-43339160 | MS.gene75883:intron | 40.0% | |
CGAACCAAAGAATACTCCAT+GGG | + | chr2.1:43340440-43340459 | MS.gene75883:intron | 40.0% | |
CTAAGGAATGGCAATGAAAG+CGG | + | chr2.1:43342120-43342139 | MS.gene75883:CDS | 40.0% | |
CTACTCAGAATGGTATTCAG+TGG | - | chr2.1:43339134-43339153 | None:intergenic | 40.0% | |
CTTCCTCTCAAACTCCAATT+TGG | - | chr2.1:43341546-43341565 | None:intergenic | 40.0% | |
GAACATAGGCAAACGAAAGA+TGG | - | chr2.1:43341203-43341222 | None:intergenic | 40.0% | |
GAATTAGACTTTGCCTCTAC+TGG | + | chr2.1:43338122-43338141 | MS.gene75883:CDS | 40.0% | |
GACATTGCAGAGTTGAAAGT+AGG | + | chr2.1:43340389-43340408 | MS.gene75883:intron | 40.0% | |
GACGAGATTTACCATGCTTT+CGG | + | chr2.1:43340261-43340280 | MS.gene75883:intron | 40.0% | |
GATTTCCTTTATACACGCTG+AGG | - | chr2.1:43338612-43338631 | None:intergenic | 40.0% | |
GCAAACGAAAGATGGTGAAA+AGG | - | chr2.1:43341195-43341214 | None:intergenic | 40.0% | |
GGCAGAGAAGAAACTTTACA+AGG | + | chr2.1:43339695-43339714 | MS.gene75883:CDS | 40.0% | |
GGGTATTTAGCGTACTATCA+TGG | + | chr2.1:43339562-43339581 | MS.gene75883:CDS | 40.0% | |
GGTCATCAAACATCAAGCAA+TGG | - | chr2.1:43340871-43340890 | None:intergenic | 40.0% | |
GGTTTGCCAAAATCTCATGA+GGG | - | chr2.1:43340627-43340646 | None:intergenic | 40.0% | |
GTCTACTTTGTTGCGTATAC+CGG | - | chr2.1:43340372-43340391 | None:intergenic | 40.0% | |
TAAGCTGAATCCACTTACTG+AGG | - | chr2.1:43342092-43342111 | None:intergenic | 40.0% | |
TATCTATCCCTTAGTTAGGG+TGG | + | chr2.1:43341386-43341405 | MS.gene75883:intron | 40.0% | |
TCAGAAGCTGATGTAAGTGT+GGG | + | chr2.1:43338413-43338432 | MS.gene75883:CDS | 40.0% | |
TCATTCTCAGTCAAGCCAAT+AGG | + | chr2.1:43342818-43342837 | MS.gene75883:CDS | 40.0% | |
TCTGATTCAGCCATGAGTTA+GGG | + | chr2.1:43340974-43340993 | MS.gene75883:intron | 40.0% | |
TGATACGAGAAGGTTATACC+AGG | - | chr2.1:43340648-43340667 | None:intergenic | 40.0% | |
TGATGACCATGAGTGATAGT+TGG | + | chr2.1:43340883-43340902 | MS.gene75883:intron | 40.0% | |
TGGAACGTATGGATAACAGA+AGG | - | chr2.1:43342452-43342471 | None:intergenic | 40.0% | |
TTAGCGTACTATCATGGAGT+AGG | + | chr2.1:43339568-43339587 | MS.gene75883:CDS | 40.0% | |
TTAGGGAAGAGAGAAATGTC+TGG | + | chr2.1:43340991-43341010 | MS.gene75883:intron | 40.0% | |
TTCAGAAGCTGATGTAAGTG+TGG | + | chr2.1:43338412-43338431 | MS.gene75883:CDS | 40.0% | |
TTCTCGCTGTTCATATTCCT+TGG | + | chr2.1:43340496-43340515 | MS.gene75883:intron | 40.0% | |
TTGAGAGTGAGGCTTCTTAT+TGG | + | chr2.1:43342016-43342035 | MS.gene75883:CDS | 40.0% | |
TTGGCATAACAGTAAGAGCA+AGG | + | chr2.1:43338948-43338967 | MS.gene75883:intron | 40.0% | |
TTGTGAGACTGTTTGGAAGA+AGG | - | chr2.1:43340690-43340709 | None:intergenic | 40.0% | |
TTTCTCTCTTCCCTAACTCA+TGG | - | chr2.1:43340987-43341006 | None:intergenic | 40.0% | |
TTTGAAGATGAGGGTGATGA+AGG | + | chr2.1:43342588-43342607 | MS.gene75883:CDS | 40.0% | |
! | AGTCTGATTTGATAAGCCTG+CGG | + | chr2.1:43341648-43341667 | MS.gene75883:CDS | 40.0% |
! | CAACAACCCTCATGAGATTT+TGG | + | chr2.1:43340618-43340637 | MS.gene75883:intron | 40.0% |
! | CTCTTTTCAGCAAGAAAAGG+AGG | - | chr2.1:43338200-43338219 | None:intergenic | 40.0% |
! | GCTTCCTGTCTTTTCTGTAT+TGG | + | chr2.1:43338781-43338800 | MS.gene75883:intron | 40.0% |
! | GCTTTTCGAAGTGGTGAATA+TGG | - | chr2.1:43340293-43340312 | None:intergenic | 40.0% |
! | GGTGTGCCCCAAATATTTTT+GGG | + | chr2.1:43339849-43339868 | MS.gene75883:intron | 40.0% |
! | TCATCAACTGGTTCTTTGAC+CGG | - | chr2.1:43338461-43338480 | None:intergenic | 40.0% |
! | TCTGAGGTTATCAAGAGTCA+TGG | - | chr2.1:43342727-43342746 | None:intergenic | 40.0% |
! | TGGTGTGCCCCAAATATTTT+TGG | + | chr2.1:43339848-43339867 | MS.gene75883:intron | 40.0% |
! | TTGTCACTTGTGAGACTGTT+TGG | - | chr2.1:43340697-43340716 | None:intergenic | 40.0% |
!! | AGGGTAAGAAGTACCTTATC+TGG | - | chr2.1:43342204-43342223 | None:intergenic | 40.0% |
!! | ATCGTTGCTATTTCAACCTG+TGG | + | chr2.1:43338310-43338329 | MS.gene75883:CDS | 40.0% |
!! | CAAGTATTGATGAGGATGGA+AGG | + | chr2.1:43337955-43337974 | MS.gene75883:CDS | 40.0% |
!! | TCATGAGATTTTGGCAAACC+TGG | + | chr2.1:43340627-43340646 | MS.gene75883:intron | 40.0% |
!! | TTATGAAATAGCGGATGCCT+GGG | - | chr2.1:43342624-43342643 | None:intergenic | 40.0% |
!! | TTTATGAAATAGCGGATGCC+TGG | - | chr2.1:43342625-43342644 | None:intergenic | 40.0% |
!!! | GCCATGCTTTGTTTTTCGAA+TGG | + | chr2.1:43342232-43342251 | MS.gene75883:intron | 40.0% |
AAGCCACCAACTATCACTCA+TGG | - | chr2.1:43340892-43340911 | None:intergenic | 45.0% | |
AATGAAATCATGCCTCCTGC+TGG | - | chr2.1:43340530-43340549 | None:intergenic | 45.0% | |
ACACGACACGAAGTCTTACT+TGG | - | chr2.1:43338695-43338714 | None:intergenic | 45.0% | |
AGAAAACTCGGCGTCATCTT+TGG | - | chr2.1:43339616-43339635 | None:intergenic | 45.0% | |
AGACAGGAAGCAAAAGGTCA+TGG | - | chr2.1:43338772-43338791 | None:intergenic | 45.0% | |
AGATGGTGCGAATAGAAGAG+TGG | - | chr2.1:43342149-43342168 | None:intergenic | 45.0% | |
AGTCGTTTGAGGAGGAGAAT+TGG | + | chr2.1:43338351-43338370 | MS.gene75883:CDS | 45.0% | |
AGTCTCACAAGTGACAAGAG+TGG | + | chr2.1:43340700-43340719 | MS.gene75883:intron | 45.0% | |
AGTTGGTTGCATTAACTGCC+GGG | + | chr2.1:43341732-43341751 | MS.gene75883:CDS | 45.0% | |
AGTTGTAGAGTCGTTTGAGG+AGG | + | chr2.1:43338343-43338362 | MS.gene75883:CDS | 45.0% | |
ATCAGTGACACGAAGAGATG+TGG | - | chr2.1:43342759-43342778 | None:intergenic | 45.0% | |
ATGGAACCATCAAGTCGTCT+AGG | + | chr2.1:43340593-43340612 | MS.gene75883:intron | 45.0% | |
ATGTAAGGACCCTCAGTAAG+TGG | + | chr2.1:43342079-43342098 | MS.gene75883:CDS | 45.0% | |
ATGTGGCAATGGTCACACTT+AGG | + | chr2.1:43340239-43340258 | MS.gene75883:intron | 45.0% | |
ATTGATGAGGATGGAAGGGT+TGG | + | chr2.1:43337960-43337979 | MS.gene75883:CDS | 45.0% | |
ATTGCCATTCCTTAGGCAGT+TGG | - | chr2.1:43342115-43342134 | None:intergenic | 45.0% | |
CAAGAGAACCAGTTCTGCAA+GGG | + | chr2.1:43339542-43339561 | MS.gene75883:CDS | 45.0% | |
CAATGTAACACAGACTGCAC+AGG | - | chr2.1:43340162-43340181 | None:intergenic | 45.0% | |
CACGACACGAAGTCTTACTT+GGG | - | chr2.1:43338694-43338713 | None:intergenic | 45.0% | |
CACTTTGATGTGGTTACAGG+AGG | + | chr2.1:43342407-43342426 | MS.gene75883:intron | 45.0% | |
CAGTTGGTTGCATTAACTGC+CGG | + | chr2.1:43341731-43341750 | MS.gene75883:CDS | 45.0% | |
CGCTGTTCATATTCCTTGGT+AGG | + | chr2.1:43340500-43340519 | MS.gene75883:intron | 45.0% | |
CGCTTTCATTGCCATTCCTT+AGG | - | chr2.1:43342122-43342141 | None:intergenic | 45.0% | |
CTCCATGGGTAAACCATACA+AGG | + | chr2.1:43340454-43340473 | MS.gene75883:intron | 45.0% | |
CTGTGCAGTCTGTGTTACAT+TGG | + | chr2.1:43340160-43340179 | MS.gene75883:intron | 45.0% | |
CTTACCAACTGCCTAAGGAA+TGG | + | chr2.1:43342108-43342127 | MS.gene75883:CDS | 45.0% | |
CTTATCCAAACAGTCAGCCA+TGG | + | chr2.1:43340574-43340593 | MS.gene75883:intron | 45.0% | |
GAAAGCCTCAGCGTGTATAA+AGG | + | chr2.1:43338604-43338623 | MS.gene75883:CDS | 45.0% | |
GCAGAGGAACTATCATCAAC+TGG | - | chr2.1:43338473-43338492 | None:intergenic | 45.0% | |
GCAGTTAATGCAACCAACTG+GGG | - | chr2.1:43341731-43341750 | None:intergenic | 45.0% | |
GCTAAATACCCTTGCAGAAC+TGG | - | chr2.1:43339553-43339572 | None:intergenic | 45.0% | |
GGAGGAGGGAATTACCAAAT+TGG | + | chr2.1:43341529-43341548 | MS.gene75883:intron | 45.0% | |
GGCAGTTAATGCAACCAACT+GGG | - | chr2.1:43341732-43341751 | None:intergenic | 45.0% | |
GGTCACAGAATCGATGTTCT+TGG | + | chr2.1:43340814-43340833 | MS.gene75883:intron | 45.0% | |
GTAGGTTGTCACAAATGTGG+AGG | + | chr2.1:43341872-43341891 | MS.gene75883:intron | 45.0% | |
GTCGTTTGAGGAGGAGAATT+GGG | + | chr2.1:43338352-43338371 | MS.gene75883:CDS | 45.0% | |
TGACCATGAGTGATAGTTGG+TGG | + | chr2.1:43340886-43340905 | MS.gene75883:intron | 45.0% | |
TGCTCTGGCATGTTCTTTGT+AGG | + | chr2.1:43339519-43339538 | MS.gene75883:intron | 45.0% | |
TGCTTCCTCTCAAGCAATTG+AGG | + | chr2.1:43342791-43342810 | MS.gene75883:CDS | 45.0% | |
TGGAACCATCAAGTCGTCTA+GGG | + | chr2.1:43340594-43340613 | MS.gene75883:intron | 45.0% | |
TGGCACTTTGATGTGGTTAC+AGG | + | chr2.1:43342404-43342423 | MS.gene75883:intron | 45.0% | |
TGTGACCATTGCCACATGAT+CGG | - | chr2.1:43340236-43340255 | None:intergenic | 45.0% | |
TTATACACGCTGAGGCTTTC+AGG | - | chr2.1:43338604-43338623 | None:intergenic | 45.0% | |
TTCAGCTTACCAACTGCCTA+AGG | + | chr2.1:43342103-43342122 | MS.gene75883:CDS | 45.0% | |
TTGACATCGGTGATACGAGA+AGG | - | chr2.1:43340658-43340677 | None:intergenic | 45.0% | |
TTGGTAAAAACCAGACGGTG+TGG | + | chr2.1:43340947-43340966 | MS.gene75883:intron | 45.0% | |
TTTGATGTGGTTACAGGAGG+TGG | + | chr2.1:43342410-43342429 | MS.gene75883:intron | 45.0% | |
! | ACATCTCTTCGTGTCACTGA+TGG | + | chr2.1:43342758-43342777 | MS.gene75883:CDS | 45.0% |
! | AGAGGGTGAGGACATTGATT+TGG | + | chr2.1:43341586-43341605 | MS.gene75883:CDS | 45.0% |
! | TAGACGACTTGATGGTTCCA+TGG | - | chr2.1:43340594-43340613 | None:intergenic | 45.0% |
! | TGAAGAGCTTTTACCCCAGT+TGG | + | chr2.1:43341715-43341734 | MS.gene75883:CDS | 45.0% |
! | TGTGTTACATTGGTTGTCCG+AGG | + | chr2.1:43340170-43340189 | MS.gene75883:intron | 45.0% |
! | TTACATTGGTTGTCCGAGGA+GGG | + | chr2.1:43340174-43340193 | MS.gene75883:intron | 45.0% |
! | TTTTCTCTGCATCTCGTCCA+GGG | - | chr2.1:43342556-43342575 | None:intergenic | 45.0% |
! | TTTTTCTCTGCATCTCGTCC+AGG | - | chr2.1:43342557-43342576 | None:intergenic | 45.0% |
!! | GATGTGGAAGTCTAGTTCTG+AGG | - | chr2.1:43342743-43342762 | None:intergenic | 45.0% |
!! | GCTTGATGGGTTACCAGATA+AGG | + | chr2.1:43342188-43342207 | MS.gene75883:CDS | 45.0% |
!! | TATGAAATAGCGGATGCCTG+GGG | - | chr2.1:43342623-43342642 | None:intergenic | 45.0% |
!! | TTGAAAGCGTTGAGGAACAC+CGG | + | chr2.1:43338062-43338081 | MS.gene75883:CDS | 45.0% |
!! | ATTACATTAAAAAAAAAAAA+AGG | - | chr2.1:43341107-43341126 | None:intergenic | 5.0% |
!!! | AAAAATATTTTAATTAATCT+TGG | + | chr2.1:43341155-43341174 | MS.gene75883:intron | 5.0% |
!!! | AAGATTAATTAAAATATTTT+TGG | - | chr2.1:43341156-43341175 | None:intergenic | 5.0% |
AAGCTCCCACTGTTCACAGA+TGG | - | chr2.1:43342166-43342185 | None:intergenic | 50.0% | |
ACTCTTCTGCGGCAGAATTC+TGG | + | chr2.1:43338662-43338681 | MS.gene75883:CDS | 50.0% | |
AGAAGCGGGAGAACATTGGA+GGG | + | chr2.1:43338551-43338570 | MS.gene75883:CDS | 50.0% | |
AGTGTGGGAAGATCACGTAG+CGG | + | chr2.1:43338428-43338447 | MS.gene75883:CDS | 50.0% | |
ATATCCATGGTCACCCTCCT+CGG | - | chr2.1:43340190-43340209 | None:intergenic | 50.0% | |
ATCTGTGAACAGTGGGAGCT+TGG | + | chr2.1:43342165-43342184 | MS.gene75883:CDS | 50.0% | |
CATAATTGCTCAACAGGCCG+AGG | + | chr2.1:43342470-43342489 | MS.gene75883:CDS | 50.0% | |
CCAGAGAGAACGGTCTGATT+CGG | + | chr2.1:43340793-43340812 | MS.gene75883:intron | 50.0% | |
CCCGCTTCTACCAATCATCA+CGG | - | chr2.1:43338540-43338559 | None:intergenic | 50.0% | |
CCCGTGATGATTGGTAGAAG+CGG | + | chr2.1:43338536-43338555 | MS.gene75883:CDS | 50.0% | |
CCGCTTCTACCAATCATCAC+GGG | - | chr2.1:43338539-43338558 | None:intergenic | 50.0% | |
CCGTGATGATTGGTAGAAGC+GGG | + | chr2.1:43338537-43338556 | MS.gene75883:CDS | 50.0% | |
CGGCAGTTAATGCAACCAAC+TGG | - | chr2.1:43341733-43341752 | None:intergenic | 50.0% | |
CTAGTCCTAGTGAACCATGC+AGG | + | chr2.1:43339634-43339653 | MS.gene75883:CDS | 50.0% | |
CTCGGCCTGTTGAGCAATTA+TGG | - | chr2.1:43342472-43342491 | None:intergenic | 50.0% | |
CTTATGCTGCGAGTGAGCTT+TGG | + | chr2.1:43338929-43338948 | MS.gene75883:intron | 50.0% | |
GAGTGGAGCAGTGACATAGT+TGG | + | chr2.1:43340928-43340947 | MS.gene75883:intron | 50.0% | |
GCAAGAGAACCAGTTCTGCA+AGG | + | chr2.1:43339541-43339560 | MS.gene75883:CDS | 50.0% | |
GTAAAAACCAGACGGTGTGG+AGG | + | chr2.1:43340950-43340969 | MS.gene75883:intron | 50.0% | |
TAGAAGCGGGAGAACATTGG+AGG | + | chr2.1:43338550-43338569 | MS.gene75883:CDS | 50.0% | |
TATGGTCGATCCCGAAAGCA+TGG | - | chr2.1:43340275-43340294 | None:intergenic | 50.0% | |
TCAGCAAGAAAAGGAGGCAG+CGG | - | chr2.1:43338194-43338213 | None:intergenic | 50.0% | |
TCGCACCATCTGTGAACAGT+GGG | + | chr2.1:43342158-43342177 | MS.gene75883:CDS | 50.0% | |
TCTGTGAACAGTGGGAGCTT+GGG | + | chr2.1:43342166-43342185 | MS.gene75883:CDS | 50.0% | |
TGATCGGCCACACTATCGAT+AGG | - | chr2.1:43340220-43340239 | None:intergenic | 50.0% | |
TGGTAGAAGCGGGAGAACAT+TGG | + | chr2.1:43338547-43338566 | MS.gene75883:CDS | 50.0% | |
TGGTTCCATGGCTGACTGTT+TGG | - | chr2.1:43340582-43340601 | None:intergenic | 50.0% | |
TTCACCACTTCGAAAAGCCG+AGG | + | chr2.1:43340295-43340314 | MS.gene75883:intron | 50.0% | |
TTCGCACCATCTGTGAACAG+TGG | + | chr2.1:43342157-43342176 | MS.gene75883:CDS | 50.0% | |
! | CACTGATTAGCAAGACCCTG+GGG | - | chr2.1:43338991-43339010 | None:intergenic | 50.0% |
! | CTGATTTGATAAGCCTGCGG+CGG | + | chr2.1:43341651-43341670 | MS.gene75883:CDS | 50.0% |
! | GGCCTTGTATGGTTTACCCA+TGG | - | chr2.1:43340459-43340478 | None:intergenic | 50.0% |
! | GGGTTGGCATATGCAAGGAA+AGG | + | chr2.1:43337976-43337995 | MS.gene75883:CDS | 50.0% |
! | GTTACATTGGTTGTCCGAGG+AGG | + | chr2.1:43340173-43340192 | MS.gene75883:intron | 50.0% |
! | TGGAAGGGTTGGCATATGCA+AGG | + | chr2.1:43337971-43337990 | MS.gene75883:CDS | 50.0% |
!! | AAGTGCCGAAAGTGTGATGG+TGG | + | chr2.1:43340113-43340132 | MS.gene75883:intron | 50.0% |
!! | CAGAAGTGCCGAAAGTGTGA+TGG | + | chr2.1:43340110-43340129 | MS.gene75883:intron | 50.0% |
!! | GCACTGATTAGCAAGACCCT+GGG | - | chr2.1:43338992-43339011 | None:intergenic | 50.0% |
!! | TGCACTGATTAGCAAGACCC+TGG | - | chr2.1:43338993-43339012 | None:intergenic | 50.0% |
ACAAAGCATGGCGCGTTGTG+AGG | - | chr2.1:43342224-43342243 | None:intergenic | 55.0% | |
ACTTCGAAAAGCCGAGGCAG+AGG | + | chr2.1:43340301-43340320 | MS.gene75883:intron | 55.0% | |
AGATCAGTGCCTGCGACTGA+TGG | - | chr2.1:43341912-43341931 | None:intergenic | 55.0% | |
AGGTAGCTTCCTCTCAGACG+CGG | - | chr2.1:43340142-43340161 | None:intergenic | 55.0% | |
AGTGGGAGCTTGGGCTTGAT+GGG | + | chr2.1:43342175-43342194 | MS.gene75883:CDS | 55.0% | |
AGTGTGGCACAATGAGCTCC+CGG | - | chr2.1:43339660-43339679 | None:intergenic | 55.0% | |
ATCAGATCCTCCACACCGTC+TGG | - | chr2.1:43340960-43340979 | None:intergenic | 55.0% | |
ATTAGCAAGACCCTGGGGAG+GGG | - | chr2.1:43338986-43339005 | None:intergenic | 55.0% | |
CAAAGCATGGCGCGTTGTGA+GGG | - | chr2.1:43342223-43342242 | None:intergenic | 55.0% | |
CCGAATCAGACCGTTCTCTC+TGG | - | chr2.1:43340796-43340815 | None:intergenic | 55.0% | |
CGATAGTGTGGCCGATCATG+TGG | + | chr2.1:43340222-43340241 | MS.gene75883:intron | 55.0% | |
CTCGGTGAACTGCCTAAGTG+TGG | - | chr2.1:43338090-43338109 | None:intergenic | 55.0% | |
GAACTGCCTAAGTGTGGCAC+CGG | - | chr2.1:43338084-43338103 | None:intergenic | 55.0% | |
GATTAGCAAGACCCTGGGGA+GGG | - | chr2.1:43338987-43339006 | None:intergenic | 55.0% | |
GCAGCGGAGATACTCTTCTG+CGG | + | chr2.1:43338651-43338670 | MS.gene75883:CDS | 55.0% | |
GGCGTCATCTTTGGTGAACG+TGG | - | chr2.1:43339607-43339626 | None:intergenic | 55.0% | |
GGCTGCCACCATCACACTTT+CGG | - | chr2.1:43340121-43340140 | None:intergenic | 55.0% | |
GTGTGGGAAGATCACGTAGC+GGG | + | chr2.1:43338429-43338448 | MS.gene75883:CDS | 55.0% | |
GTTGGCCCTAGACGACTTGA+TGG | - | chr2.1:43340602-43340621 | None:intergenic | 55.0% | |
TCCTAGTGAACCATGCAGGC+CGG | + | chr2.1:43339638-43339657 | MS.gene75883:CDS | 55.0% | |
TGATTAGCAAGACCCTGGGG+AGG | - | chr2.1:43338988-43339007 | None:intergenic | 55.0% | |
TGTGGCCGATCATGTGGCAA+TGG | + | chr2.1:43340228-43340247 | MS.gene75883:intron | 55.0% | |
! | ATCACGTAGCGGGAAGCAAC+CGG | + | chr2.1:43338439-43338458 | MS.gene75883:CDS | 55.0% |
! | TCTGCCTCGGCTTTTCGAAG+TGG | - | chr2.1:43340302-43340321 | None:intergenic | 55.0% |
!! | ACCTGTTGACTCCTCTGCCT+CGG | - | chr2.1:43340315-43340334 | None:intergenic | 55.0% |
ACACATACTCCCCCTCCCCA+GGG | + | chr2.1:43338973-43338992 | MS.gene75883:intron | 60.0% | |
AGCGGCGGAGGTGGTAAATC+AGG | - | chr2.1:43338176-43338195 | None:intergenic | 60.0% | |
AGGTGGTAAATCAGGCGGCG+GGG | - | chr2.1:43338168-43338187 | None:intergenic | 60.0% | |
CAGTGGGAGCTTGGGCTTGA+TGG | + | chr2.1:43342174-43342193 | MS.gene75883:CDS | 60.0% | |
CCTAGTGAACCATGCAGGCC+GGG | + | chr2.1:43339639-43339658 | MS.gene75883:CDS | 60.0% | |
GAGGTGGTAAATCAGGCGGC+GGG | - | chr2.1:43338169-43338188 | None:intergenic | 60.0% | |
GCAAGAAAAGGAGGCAGCGG+CGG | - | chr2.1:43338191-43338210 | None:intergenic | 60.0% | |
GCATGGATGCCATCAGTCGC+AGG | + | chr2.1:43341900-43341919 | MS.gene75883:CDS | 60.0% | |
GGAGGTGGTAAATCAGGCGG+CGG | - | chr2.1:43338170-43338189 | None:intergenic | 60.0% | |
GGCGGAGGTGGTAAATCAGG+CGG | - | chr2.1:43338173-43338192 | None:intergenic | 60.0% | |
TTAGCAAGACCCTGGGGAGG+GGG | - | chr2.1:43338985-43339004 | None:intergenic | 60.0% | |
TTGTCCGAGGAGGGTGACCA+TGG | + | chr2.1:43340183-43340202 | MS.gene75883:intron | 60.0% | |
TTTCACTGATGCACCGCCGC+AGG | - | chr2.1:43341667-43341686 | None:intergenic | 60.0% | |
!! | GGAACACCGGTGCCACACTT+AGG | + | chr2.1:43338075-43338094 | MS.gene75883:CDS | 60.0% |
AAATCAGGCGGCGGGGAAGG+CGG | - | chr2.1:43338161-43338180 | None:intergenic | 65.0% | |
AGAAAAGGAGGCAGCGGCGG+AGG | - | chr2.1:43338188-43338207 | None:intergenic | 65.0% | |
CAATGAGCTCCCGGCCTGCA+TGG | - | chr2.1:43339651-43339670 | None:intergenic | 65.0% | |
CACACATACTCCCCCTCCCC+AGG | + | chr2.1:43338972-43338991 | MS.gene75883:intron | 65.0% | |
CCCGGCCTGCATGGTTCACT+AGG | - | chr2.1:43339642-43339661 | None:intergenic | 65.0% | |
GCCGAGGCAGAGGAGTCAAC+AGG | + | chr2.1:43340311-43340330 | MS.gene75883:intron | 65.0% | |
GGCTTCAGGCAGGCCAGTAG+AGG | - | chr2.1:43338138-43338157 | None:intergenic | 65.0% | |
GGTAAATCAGGCGGCGGGGA+AGG | - | chr2.1:43338164-43338183 | None:intergenic | 65.0% | |
TCCTTGGTAGGCGCTCCAGC+AGG | + | chr2.1:43340512-43340531 | MS.gene75883:intron | 65.0% | |
TTGGTAGGCGCTCCAGCAGG+AGG | + | chr2.1:43340515-43340534 | MS.gene75883:intron | 65.0% | |
! | CTGGGGAGGGGGAGTATGTG+TGG | - | chr2.1:43338974-43338993 | None:intergenic | 65.0% |
! | TCCTGCTGGAGCGCCTACCA+AGG | - | chr2.1:43340516-43340535 | None:intergenic | 65.0% |
AAAGGAGGCAGCGGCGGAGG+TGG | - | chr2.1:43338185-43338204 | None:intergenic | 70.0% | |
AATCAGGCGGCGGGGAAGGC+GGG | - | chr2.1:43338160-43338179 | None:intergenic | 70.0% | |
TGGTGGCAGCCGCGTCTGAG+AGG | + | chr2.1:43340130-43340149 | MS.gene75883:intron | 70.0% | |
!! | GCGGAGGTGCTCGAAGTCCC+TGG | + | chr2.1:43342536-43342555 | MS.gene75883:CDS | 70.0% |
ATCAGGCGGCGGGGAAGGCG+GGG | - | chr2.1:43338159-43338178 | None:intergenic | 75.0% | |
GGGAAGGCGGGGCTTCAGGC+AGG | - | chr2.1:43338148-43338167 | None:intergenic | 75.0% | |
! | GGCGGGGAAGGCGGGGCTTC+AGG | - | chr2.1:43338152-43338171 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 43337939 | 43342839 | 43337939 | ID=MS.gene75883 |
chr2.1 | mRNA | 43337939 | 43342839 | 43337939 | ID=MS.gene75883.t1;Parent=MS.gene75883 |
chr2.1 | exon | 43337939 | 43338695 | 43337939 | ID=MS.gene75883.t1.exon1;Parent=MS.gene75883.t1 |
chr2.1 | CDS | 43337939 | 43338695 | 43337939 | ID=cds.MS.gene75883.t1;Parent=MS.gene75883.t1 |
chr2.1 | exon | 43339541 | 43339725 | 43339541 | ID=MS.gene75883.t1.exon2;Parent=MS.gene75883.t1 |
chr2.1 | CDS | 43339541 | 43339725 | 43339541 | ID=cds.MS.gene75883.t1;Parent=MS.gene75883.t1 |
chr2.1 | exon | 43341530 | 43341753 | 43341530 | ID=MS.gene75883.t1.exon3;Parent=MS.gene75883.t1 |
chr2.1 | CDS | 43341530 | 43341753 | 43341530 | ID=cds.MS.gene75883.t1;Parent=MS.gene75883.t1 |
chr2.1 | exon | 43341876 | 43342209 | 43341876 | ID=MS.gene75883.t1.exon4;Parent=MS.gene75883.t1 |
chr2.1 | CDS | 43341876 | 43342209 | 43341876 | ID=cds.MS.gene75883.t1;Parent=MS.gene75883.t1 |
chr2.1 | exon | 43342426 | 43342839 | 43342426 | ID=MS.gene75883.t1.exon5;Parent=MS.gene75883.t1 |
chr2.1 | CDS | 43342426 | 43342839 | 43342426 | ID=cds.MS.gene75883.t1;Parent=MS.gene75883.t1 |
Gene Sequence |
Protein sequence |