Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75920.t1 | XP_003618105.1 | 89.3 | 197 | 9 | 1 | 1 | 185 | 27 | 223 | 4.00E-92 | 347.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75920.t1 | G7KFE7 | 89.3 | 197 | 9 | 1 | 1 | 185 | 27 | 223 | 2.9e-92 | 347.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene75920 | -0.829273 | 5.64E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75920.t1 | MTR_5g099030 | 89.340 | 197 | 9 | 1 | 1 | 185 | 27 | 223 | 6.69e-128 | 358 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75920.t1 | AT4G38370 | 60.406 | 197 | 63 | 2 | 1 | 185 | 32 | 225 | 8.04e-82 | 242 |
Find 54 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTGGGTTGTTCTTGAAAA+AGG | 0.215376 | 5.1:+80698931 | None:intergenic |
| ATCGACAGTATGATCAGATT+TGG | 0.254816 | 5.1:-80698242 | MS.gene75920:intron |
| AAATTCAATTCACAGGAAAA+TGG | 0.281279 | 5.1:-80699179 | MS.gene75920:intron |
| TTAACACTTTCCCCTCCTTC+TGG | 0.283802 | 5.1:+80698189 | None:intergenic |
| TTCAATATTAGCGGCGGTTC+AGG | 0.288734 | 5.1:-80697712 | MS.gene75920:CDS |
| TCTGGGGCCAATTGGAATTC+AGG | 0.308129 | 5.1:+80699149 | None:intergenic |
| CGCCAGTATGCTCTGAATAC+TGG | 0.357359 | 5.1:-80697666 | MS.gene75920:CDS |
| TGTGCTTGATTAACGCCGTC+TGG | 0.365035 | 5.1:+80699131 | None:intergenic |
| TCGACAGTATGATCAGATTT+GGG | 0.380484 | 5.1:-80698241 | MS.gene75920:intron |
| TCAGAGCATACTGGCGGTGC+TGG | 0.382439 | 5.1:+80697673 | None:intergenic |
| TTCAAATTCTGATTCGAGAA+TGG | 0.412207 | 5.1:+80698134 | None:intergenic |
| TAACGCCGTCTGGGGCCAAT+TGG | 0.412841 | 5.1:+80699141 | None:intergenic |
| ATCATGCAGATGTGCGATTC+TGG | 0.416868 | 5.1:-80697823 | MS.gene75920:intron |
| GAATTGTTTGCAAGATCTGC+AGG | 0.433814 | 5.1:+80697781 | None:intergenic |
| GATGAGAAAGATCCTCTTGT+TGG | 0.442170 | 5.1:-80698213 | MS.gene75920:CDS |
| AGTAGCGCTCACGAAGATCT+TGG | 0.456148 | 5.1:+80698848 | None:intergenic |
| GATCTTCGTGAGCGCTACTT+TGG | 0.462299 | 5.1:-80698844 | MS.gene75920:CDS |
| GTGCTTGATTAACGCCGTCT+GGG | 0.468316 | 5.1:+80699132 | None:intergenic |
| CGATTCTGGTTGTCAGCCAT+GGG | 0.469114 | 5.1:-80697809 | MS.gene75920:CDS |
| CTCCAGTATTCAGAGCATAC+TGG | 0.471623 | 5.1:+80697664 | None:intergenic |
| AGAAGGAGGGGAAAGTGTTA+AGG | 0.483555 | 5.1:-80698187 | MS.gene75920:CDS |
| TGGCGGTGCTGGGACAAGAT+TGG | 0.489709 | 5.1:+80697684 | None:intergenic |
| GCATGCTGCTAAGAAACATA+AGG | 0.497206 | 5.1:-80697757 | MS.gene75920:CDS |
| TATTCTCCCTGAATTCCAAT+TGG | 0.506183 | 5.1:-80699156 | MS.gene75920:CDS |
| GATCCTCTTGTTGGGCCAGA+AGG | 0.507778 | 5.1:-80698204 | MS.gene75920:CDS |
| ATGAGAAAGATCCTCTTGTT+GGG | 0.508854 | 5.1:-80698212 | MS.gene75920:CDS |
| GCGATTCTGGTTGTCAGCCA+TGG | 0.511993 | 5.1:-80697810 | MS.gene75920:CDS |
| CTGGGGCCAATTGGAATTCA+GGG | 0.512536 | 5.1:+80699150 | None:intergenic |
| TTCTCGAATCAGAATTTGAA+GGG | 0.530175 | 5.1:-80698131 | MS.gene75920:intron |
| CAGAGCATACTGGCGGTGCT+GGG | 0.532312 | 5.1:+80697674 | None:intergenic |
| TGCAACAACATTAGCAGTGT+GGG | 0.533819 | 5.1:+80698915 | None:intergenic |
| TGACTTAGCTTCAATATTAG+CGG | 0.535064 | 5.1:-80697721 | MS.gene75920:CDS |
| CTCTTGTTGGGCCAGAAGGA+GGG | 0.539146 | 5.1:-80698200 | MS.gene75920:CDS |
| GTTAATCAAGCACAACTCGC+TGG | 0.541912 | 5.1:-80699122 | MS.gene75920:CDS |
| CTCTGAATACTGGAGAGCTC+AGG | 0.547008 | 5.1:-80697656 | MS.gene75920:CDS |
| AATATTAGCGGCGGTTCAGG+TGG | 0.558199 | 5.1:-80697709 | MS.gene75920:CDS |
| CCTCCTTCTGGCCCAACAAG+AGG | 0.558622 | 5.1:+80698201 | None:intergenic |
| TCTTGTTGGGCCAGAAGGAG+GGG | 0.564650 | 5.1:-80698199 | MS.gene75920:CDS |
| CCTCTTGTTGGGCCAGAAGG+AGG | 0.569026 | 5.1:-80698201 | MS.gene75920:CDS |
| TGAAGCTAAGTCATCAGAAG+TGG | 0.576783 | 5.1:+80697731 | None:intergenic |
| TGCTTGATTAACGCCGTCTG+GGG | 0.585399 | 5.1:+80699133 | None:intergenic |
| ATTCTCGAATCAGAATTTGA+AGG | 0.587018 | 5.1:-80698132 | MS.gene75920:CDS |
| GAATTCCAATTGGCCCCAGA+CGG | 0.595083 | 5.1:-80699146 | MS.gene75920:CDS |
| ATCATGAGATAAAAGCTCAA+AGG | 0.601806 | 5.1:+80698816 | None:intergenic |
| AATTGTTTGCAAGATCTGCA+GGG | 0.616735 | 5.1:+80697782 | None:intergenic |
| CAAATGCGCACATTAGCAAG+TGG | 0.629630 | 5.1:+80698961 | None:intergenic |
| TGAGATAAAAGCTCAAAGGA+AGG | 0.631369 | 5.1:+80698820 | None:intergenic |
| ATTGTTTGCAAGATCTGCAG+GGG | 0.632923 | 5.1:+80697783 | None:intergenic |
| CTTAGCTTCAATATTAGCGG+CGG | 0.633224 | 5.1:-80697718 | MS.gene75920:CDS |
| GAAGCTAAGTCATCAGAAGT+GGG | 0.635529 | 5.1:+80697732 | None:intergenic |
| AGATCTGCAGGGGATCCCCA+TGG | 0.642367 | 5.1:+80697793 | None:intergenic |
| TTGCAACAACATTAGCAGTG+TGG | 0.655752 | 5.1:+80698914 | None:intergenic |
| CAGTATTCAGAGCATACTGG+CGG | 0.703219 | 5.1:+80697667 | None:intergenic |
| GATTCTGGTTGTCAGCCATG+GGG | 0.723007 | 5.1:-80697808 | MS.gene75920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGATATTACAGATAATTA+TGG | + | chr5.1:80698300-80698319 | None:intergenic | 15.0% |
| !! | GAATTTCAAATGATATTTAA+AGG | + | chr5.1:80698804-80698823 | None:intergenic | 15.0% |
| !! | TATTTATTTATTTATTGGAC+AGG | - | chr5.1:80697893-80697912 | MS.gene75920:intron | 15.0% |
| !! | TCATATTCATAAATTCTAAT+TGG | - | chr5.1:80698147-80698166 | MS.gene75920:CDS | 15.0% |
| !! | TTGATATTTATAACAATACT+CGG | - | chr5.1:80698354-80698373 | MS.gene75920:intron | 15.0% |
| !!! | AATATCAACATTTTATATCA+CGG | + | chr5.1:80698342-80698361 | None:intergenic | 15.0% |
| !!! | AGATAGTGAATATTTTATTT+TGG | - | chr5.1:80698924-80698943 | MS.gene75920:CDS | 15.0% |
| !!! | TATATCTTTAAGTATGTTTT+TGG | - | chr5.1:80699005-80699024 | MS.gene75920:intron | 15.0% |
| !! | ATAAATTCTAATTGGTATTG+AGG | - | chr5.1:80698155-80698174 | MS.gene75920:CDS | 20.0% |
| !! | TTTCAGCATACTTATATAAA+GGG | + | chr5.1:80698593-80698612 | None:intergenic | 20.0% |
| ! | AAATTCAATTCACAGGAAAA+TGG | - | chr5.1:80697718-80697737 | MS.gene75920:CDS | 25.0% |
| ! | ATGATATTTAAAGGCAGAAA+TGG | + | chr5.1:80698795-80698814 | None:intergenic | 25.0% |
| ! | CAAATTCAAATTCAATTCAC+AGG | - | chr5.1:80697711-80697730 | MS.gene75920:CDS | 25.0% |
| ! | GTTTCAGCATACTTATATAA+AGG | + | chr5.1:80698594-80698613 | None:intergenic | 25.0% |
| ! | TGATATTTAAAGGCAGAAAT+GGG | + | chr5.1:80698794-80698813 | None:intergenic | 25.0% |
| ! | TTCAGCATACTTATATAAAG+GGG | + | chr5.1:80698592-80698611 | None:intergenic | 25.0% |
| !! | AATTGGTATTGAGGTATAAT+TGG | - | chr5.1:80698164-80698183 | MS.gene75920:CDS | 25.0% |
| !! | TTTTATCTCATGATATGGTA+TGG | - | chr5.1:80698090-80698109 | MS.gene75920:intron | 25.0% |
| AAAATGAGTTTCGCAAACTA+CGG | + | chr5.1:80698619-80698638 | None:intergenic | 30.0% | |
| ACTACTTACATATTCTGTAG+CGG | - | chr5.1:80698402-80698421 | MS.gene75920:intron | 30.0% | |
| ATCATGAGATAAAAGCTCAA+AGG | + | chr5.1:80698084-80698103 | None:intergenic | 30.0% | |
| ATTCTCGAATCAGAATTTGA+AGG | - | chr5.1:80698765-80698784 | MS.gene75920:intron | 30.0% | |
| CAGATAATTATGGTCAAAAG+TGG | + | chr5.1:80698290-80698309 | None:intergenic | 30.0% | |
| CATGAAAAACTTAAACGATG+TGG | + | chr5.1:80698246-80698265 | None:intergenic | 30.0% | |
| TGACTTAGCTTCAATATTAG+CGG | - | chr5.1:80699176-80699195 | MS.gene75920:intron | 30.0% | |
| TGTTTGTTTGTTTGCATGTT+AGG | + | chr5.1:80697838-80697857 | None:intergenic | 30.0% | |
| TTCTCGAATCAGAATTTGAA+GGG | - | chr5.1:80698766-80698785 | MS.gene75920:intron | 30.0% | |
| ! | GCATTGAATATTCCTTTTCA+TGG | - | chr5.1:80698008-80698027 | MS.gene75920:intron | 30.0% |
| ! | TGAGCTTTTATCTCATGATA+TGG | - | chr5.1:80698085-80698104 | MS.gene75920:intron | 30.0% |
| ! | TTCAAATTCTGATTCGAGAA+TGG | + | chr5.1:80698766-80698785 | None:intergenic | 30.0% |
| AATTGTTTGCAAGATCTGCA+GGG | + | chr5.1:80699118-80699137 | None:intergenic | 35.0% | |
| ATAATTGGATAGTTAGCAGC+AGG | - | chr5.1:80698179-80698198 | MS.gene75920:CDS | 35.0% | |
| ATCGACAGTATGATCAGATT+TGG | - | chr5.1:80698655-80698674 | MS.gene75920:intron | 35.0% | |
| ATGAGAAAGATCCTCTTGTT+GGG | - | chr5.1:80698685-80698704 | MS.gene75920:intron | 35.0% | |
| ATGTAAGTAGTGGCACTAAA+CGG | + | chr5.1:80698393-80698412 | None:intergenic | 35.0% | |
| CAGTAGACTTGCAAAAACAA+TGG | - | chr5.1:80698740-80698759 | MS.gene75920:intron | 35.0% | |
| GCTACAGAATATGTAAGTAG+TGG | + | chr5.1:80698403-80698422 | None:intergenic | 35.0% | |
| TATTCTCCCTGAATTCCAAT+TGG | - | chr5.1:80697741-80697760 | MS.gene75920:CDS | 35.0% | |
| TCGACAGTATGATCAGATTT+GGG | - | chr5.1:80698656-80698675 | MS.gene75920:intron | 35.0% | |
| TGAGATAAAAGCTCAAAGGA+AGG | + | chr5.1:80698080-80698099 | None:intergenic | 35.0% | |
| ! | ACATTTTATATCACGGTCAC+AGG | + | chr5.1:80698335-80698354 | None:intergenic | 35.0% |
| ! | CGCTGGATTTTCATTTCAAA+AGG | - | chr5.1:80697792-80697811 | MS.gene75920:CDS | 35.0% |
| ! | TGTGGGTTGTTCTTGAAAAA+GGG | + | chr5.1:80697968-80697987 | None:intergenic | 35.0% |
| !!! | CATTGTTTTTGCAAGTCTAC+TGG | + | chr5.1:80698742-80698761 | None:intergenic | 35.0% |
| !!! | TCTTTTTTAGCACAAGCTTG+TGG | - | chr5.1:80698838-80698857 | MS.gene75920:CDS | 35.0% |
| AAACTCATGACTGAGTGAGT+AGG | + | chr5.1:80698468-80698487 | None:intergenic | 40.0% | |
| ATTGTTTGCAAGATCTGCAG+GGG | + | chr5.1:80699117-80699136 | None:intergenic | 40.0% | |
| CAACTTCAACTGTTGCAATG+AGG | + | chr5.1:80698435-80698454 | None:intergenic | 40.0% | |
| CTTACATATTCTGTAGCGGT+AGG | - | chr5.1:80698406-80698425 | MS.gene75920:intron | 40.0% | |
| CTTAGCTTCAATATTAGCGG+CGG | - | chr5.1:80699179-80699198 | MS.gene75920:intron | 40.0% | |
| CTTGGATGACCTTACAATGA+GGG | + | chr5.1:80698034-80698053 | None:intergenic | 40.0% | |
| GAAGCTAAGTCATCAGAAGT+GGG | + | chr5.1:80699168-80699187 | None:intergenic | 40.0% | |
| GAATTGTTTGCAAGATCTGC+AGG | + | chr5.1:80699119-80699138 | None:intergenic | 40.0% | |
| GATGAGAAAGATCCTCTTGT+TGG | - | chr5.1:80698684-80698703 | MS.gene75920:intron | 40.0% | |
| GCATGCTGCTAAGAAACATA+AGG | - | chr5.1:80699140-80699159 | MS.gene75920:CDS | 40.0% | |
| GCTTCAGTAAACCCTTTCTT+GGG | - | chr5.1:80698529-80698548 | MS.gene75920:intron | 40.0% | |
| GTGTTAGAAAGCTCTTGTCA+CGG | + | chr5.1:80698563-80698582 | None:intergenic | 40.0% | |
| TCTTGGATGACCTTACAATG+AGG | + | chr5.1:80698035-80698054 | None:intergenic | 40.0% | |
| TGAAGCTAAGTCATCAGAAG+TGG | + | chr5.1:80699169-80699188 | None:intergenic | 40.0% | |
| TGCAACAACATTAGCAGTGT+GGG | + | chr5.1:80697985-80698004 | None:intergenic | 40.0% | |
| TGCTTCAGTAAACCCTTTCT+TGG | - | chr5.1:80698528-80698547 | MS.gene75920:intron | 40.0% | |
| TGTAAGTAGTGGCACTAAAC+GGG | + | chr5.1:80698392-80698411 | None:intergenic | 40.0% | |
| TTACAATGAGGGCCATGAAA+AGG | + | chr5.1:80698023-80698042 | None:intergenic | 40.0% | |
| TTGCAACAACATTAGCAGTG+TGG | + | chr5.1:80697986-80698005 | None:intergenic | 40.0% | |
| ! | GTGGGTTGTTCTTGAAAAAG+GGG | + | chr5.1:80697967-80697986 | None:intergenic | 40.0% |
| ! | GTGTGGGTTGTTCTTGAAAA+AGG | + | chr5.1:80697969-80697988 | None:intergenic | 40.0% |
| ! | TGCACAGGGTTTTTCATCTA+TGG | - | chr5.1:80698959-80698978 | MS.gene75920:CDS | 40.0% |
| ! | TTTTCATGGCCCTCATTGTA+AGG | - | chr5.1:80698022-80698041 | MS.gene75920:intron | 40.0% |
| AATCGCACATCTGCATGATG+TGG | + | chr5.1:80699073-80699092 | None:intergenic | 45.0% | |
| ATCATGCAGATGTGCGATTC+TGG | - | chr5.1:80699074-80699093 | MS.gene75920:intron | 45.0% | |
| ATGAGTTTCGCAAACTACGG+TGG | + | chr5.1:80698616-80698635 | None:intergenic | 45.0% | |
| CAAATGCGCACATTAGCAAG+TGG | + | chr5.1:80697939-80697958 | None:intergenic | 45.0% | |
| CACATCTGCATGATGTGGAA+TGG | + | chr5.1:80699068-80699087 | None:intergenic | 45.0% | |
| CAGTATTCAGAGCATACTGG+CGG | + | chr5.1:80699233-80699252 | None:intergenic | 45.0% | |
| CTCCAGTATTCAGAGCATAC+TGG | + | chr5.1:80699236-80699255 | None:intergenic | 45.0% | |
| GTCAGCTTGAACTAACTGCA+GGG | + | chr5.1:80698864-80698883 | None:intergenic | 45.0% | |
| GTTAATCAAGCACAACTCGC+TGG | - | chr5.1:80697775-80697794 | MS.gene75920:CDS | 45.0% | |
| TGTCAGCTTGAACTAACTGC+AGG | + | chr5.1:80698865-80698884 | None:intergenic | 45.0% | |
| TTAACACTTTCCCCTCCTTC+TGG | + | chr5.1:80698711-80698730 | None:intergenic | 45.0% | |
| TTAGAAAGCTCTTGTCACGG+CGG | + | chr5.1:80698560-80698579 | None:intergenic | 45.0% | |
| TTCAATATTAGCGGCGGTTC+AGG | - | chr5.1:80699185-80699204 | MS.gene75920:intron | 45.0% | |
| !! | AGAAGGAGGGGAAAGTGTTA+AGG | - | chr5.1:80698710-80698729 | MS.gene75920:intron | 45.0% |
| !! | CTATTTATTTATTTATTTAT+TGG | - | chr5.1:80697888-80697907 | MS.gene75920:intron | 5.0% |
| AATATTAGCGGCGGTTCAGG+TGG | - | chr5.1:80699188-80699207 | MS.gene75920:intron | 50.0% | |
| AGTAGCGCTCACGAAGATCT+TGG | + | chr5.1:80698052-80698071 | None:intergenic | 50.0% | |
| CTCTGAATACTGGAGAGCTC+AGG | - | chr5.1:80699241-80699260 | MS.gene75920:intron | 50.0% | |
| CTGGGGCCAATTGGAATTCA+GGG | + | chr5.1:80697750-80697769 | None:intergenic | 50.0% | |
| GAATTCCAATTGGCCCCAGA+CGG | - | chr5.1:80697751-80697770 | MS.gene75920:CDS | 50.0% | |
| GATCTTCGTGAGCGCTACTT+TGG | - | chr5.1:80698053-80698072 | MS.gene75920:intron | 50.0% | |
| GGCTTGTGATCTAGTGCACA+GGG | - | chr5.1:80698945-80698964 | MS.gene75920:CDS | 50.0% | |
| GTGCTTGATTAACGCCGTCT+GGG | + | chr5.1:80697768-80697787 | None:intergenic | 50.0% | |
| TGCTTGATTAACGCCGTCTG+GGG | + | chr5.1:80697767-80697786 | None:intergenic | 50.0% | |
| TGTGCTTGATTAACGCCGTC+TGG | + | chr5.1:80697769-80697788 | None:intergenic | 50.0% | |
| ! | CGATTCTGGTTGTCAGCCAT+GGG | - | chr5.1:80699088-80699107 | MS.gene75920:intron | 50.0% |
| ! | CGCCAGTATGCTCTGAATAC+TGG | - | chr5.1:80699231-80699250 | MS.gene75920:intron | 50.0% |
| ! | GATTCTGGTTGTCAGCCATG+GGG | - | chr5.1:80699089-80699108 | MS.gene75920:intron | 50.0% |
| ! | TCTGGGGCCAATTGGAATTC+AGG | + | chr5.1:80697751-80697770 | None:intergenic | 50.0% |
| ! | TGGCTTGTGATCTAGTGCAC+AGG | - | chr5.1:80698944-80698963 | MS.gene75920:CDS | 50.0% |
| CTCTTGTTGGGCCAGAAGGA+GGG | - | chr5.1:80698697-80698716 | MS.gene75920:intron | 55.0% | |
| GATCCTCTTGTTGGGCCAGA+AGG | - | chr5.1:80698693-80698712 | MS.gene75920:intron | 55.0% | |
| TCTTGTTGGGCCAGAAGGAG+GGG | - | chr5.1:80698698-80698717 | MS.gene75920:intron | 55.0% | |
| ! | GCGATTCTGGTTGTCAGCCA+TGG | - | chr5.1:80699087-80699106 | MS.gene75920:intron | 55.0% |
| AAAGCTCTTGTCACGGCGGC+AGG | + | chr5.1:80698556-80698575 | None:intergenic | 60.0% | |
| AGATCTGCAGGGGATCCCCA+TGG | + | chr5.1:80699107-80699126 | None:intergenic | 60.0% | |
| CAGAGCATACTGGCGGTGCT+GGG | + | chr5.1:80699226-80699245 | None:intergenic | 60.0% | |
| CCTCCTTCTGGCCCAACAAG+AGG | + | chr5.1:80698699-80698718 | None:intergenic | 60.0% | |
| CCTCTTGTTGGGCCAGAAGG+AGG | - | chr5.1:80698696-80698715 | MS.gene75920:intron | 60.0% | |
| TCAGAGCATACTGGCGGTGC+TGG | + | chr5.1:80699227-80699246 | None:intergenic | 60.0% | |
| ! | TAACGCCGTCTGGGGCCAAT+TGG | + | chr5.1:80697759-80697778 | None:intergenic | 60.0% |
| ! | TGGCGGTGCTGGGACAAGAT+TGG | + | chr5.1:80699216-80699235 | None:intergenic | 60.0% |
| ACGGCGGCAGGTCCCAAGAA+AGG | + | chr5.1:80698544-80698563 | None:intergenic | 65.0% | |
| CGGCGGCAGGTCCCAAGAAA+GGG | + | chr5.1:80698543-80698562 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 80697644 | 80699275 | 80697644 | ID=MS.gene75920 |
| chr5.1 | mRNA | 80697644 | 80699275 | 80697644 | ID=MS.gene75920.t1;Parent=MS.gene75920 |
| chr5.1 | exon | 80699273 | 80699275 | 80699273 | ID=MS.gene75920.t1.exon1;Parent=MS.gene75920.t1 |
| chr5.1 | CDS | 80699273 | 80699275 | 80699273 | ID=cds.MS.gene75920.t1;Parent=MS.gene75920.t1 |
| chr5.1 | exon | 80699106 | 80699186 | 80699106 | ID=MS.gene75920.t1.exon2;Parent=MS.gene75920.t1 |
| chr5.1 | CDS | 80699106 | 80699186 | 80699106 | ID=cds.MS.gene75920.t1;Parent=MS.gene75920.t1 |
| chr5.1 | exon | 80698912 | 80699004 | 80698912 | ID=MS.gene75920.t1.exon3;Parent=MS.gene75920.t1 |
| chr5.1 | CDS | 80698912 | 80699004 | 80698912 | ID=cds.MS.gene75920.t1;Parent=MS.gene75920.t1 |
| chr5.1 | exon | 80698813 | 80698875 | 80698813 | ID=MS.gene75920.t1.exon4;Parent=MS.gene75920.t1 |
| chr5.1 | CDS | 80698813 | 80698875 | 80698813 | ID=cds.MS.gene75920.t1;Parent=MS.gene75920.t1 |
| chr5.1 | exon | 80698132 | 80698256 | 80698132 | ID=MS.gene75920.t1.exon5;Parent=MS.gene75920.t1 |
| chr5.1 | CDS | 80698132 | 80698256 | 80698132 | ID=cds.MS.gene75920.t1;Parent=MS.gene75920.t1 |
| chr5.1 | exon | 80697644 | 80697836 | 80697644 | ID=MS.gene75920.t1.exon6;Parent=MS.gene75920.t1 |
| chr5.1 | CDS | 80697644 | 80697836 | 80697644 | ID=cds.MS.gene75920.t1;Parent=MS.gene75920.t1 |
| Gene Sequence |
| Protein sequence |
