Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76285.t1 | XP_013470199.1 | 96.3 | 431 | 12 | 1 | 1 | 431 | 10 | 436 | 1.40E-196 | 695.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76285.t1 | Q9SQI8 | 71.6 | 429 | 112 | 3 | 5 | 431 | 26 | 446 | 2.0e-130 | 467.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76285.t1 | A0A072VR15 | 96.3 | 431 | 12 | 1 | 1 | 431 | 10 | 436 | 1.0e-196 | 695.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene84379 | MS.gene76285 | PPI |
| MS.gene76285 | MS.gene009450 | PPI |
| MS.gene76285 | MS.gene51623 | PPI |
| MS.gene76285 | MS.gene56252 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76285.t1 | MTR_1g111140 | 97.680 | 431 | 6 | 1 | 1 | 431 | 10 | 436 | 0.0 | 838 |
| MS.gene76285.t1 | MTR_1g096240 | 61.239 | 436 | 137 | 9 | 4 | 430 | 10 | 422 | 1.42e-156 | 451 |
| MS.gene76285.t1 | MTR_8g018770 | 33.750 | 400 | 223 | 10 | 40 | 417 | 115 | 494 | 4.80e-54 | 189 |
| MS.gene76285.t1 | MTR_1g091037 | 32.824 | 393 | 235 | 10 | 44 | 423 | 213 | 589 | 1.81e-46 | 170 |
| MS.gene76285.t1 | MTR_1g091037 | 35.537 | 121 | 67 | 3 | 44 | 153 | 87 | 207 | 1.55e-12 | 70.1 |
| MS.gene76285.t1 | MTR_1g091037 | 32.824 | 393 | 235 | 10 | 44 | 423 | 205 | 581 | 1.92e-46 | 170 |
| MS.gene76285.t1 | MTR_1g091037 | 44.872 | 78 | 42 | 1 | 44 | 120 | 79 | 156 | 1.71e-12 | 69.7 |
| MS.gene76285.t1 | MTR_5g093300 | 24.282 | 383 | 224 | 11 | 41 | 418 | 88 | 409 | 2.93e-21 | 96.3 |
| MS.gene76285.t1 | MTR_2g006820 | 23.822 | 382 | 228 | 10 | 41 | 418 | 85 | 407 | 2.42e-20 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76285.t1 | AT3G25860 | 73.529 | 408 | 104 | 2 | 24 | 431 | 43 | 446 | 0.0 | 546 |
| MS.gene76285.t1 | AT1G34430 | 57.919 | 442 | 155 | 5 | 7 | 430 | 2 | 430 | 3.35e-153 | 443 |
| MS.gene76285.t1 | AT1G54220 | 34.794 | 388 | 234 | 9 | 40 | 417 | 112 | 490 | 1.31e-54 | 190 |
| MS.gene76285.t1 | AT1G54220 | 34.794 | 388 | 234 | 9 | 40 | 417 | 112 | 490 | 1.31e-54 | 190 |
| MS.gene76285.t1 | AT3G13930 | 33.247 | 385 | 244 | 7 | 40 | 417 | 112 | 490 | 1.66e-50 | 179 |
| MS.gene76285.t1 | AT3G52200 | 32.031 | 384 | 234 | 7 | 44 | 416 | 217 | 584 | 2.73e-46 | 169 |
| MS.gene76285.t1 | AT3G52200 | 35.593 | 118 | 75 | 1 | 44 | 160 | 90 | 207 | 5.35e-15 | 77.8 |
| MS.gene76285.t1 | AT3G52200 | 32.031 | 384 | 234 | 7 | 44 | 416 | 293 | 660 | 3.85e-46 | 170 |
| MS.gene76285.t1 | AT3G52200 | 35.593 | 118 | 75 | 1 | 44 | 160 | 166 | 283 | 2.79e-15 | 78.6 |
| MS.gene76285.t1 | AT4G26910 | 24.219 | 384 | 226 | 12 | 41 | 418 | 94 | 418 | 7.35e-22 | 98.2 |
| MS.gene76285.t1 | AT4G26910 | 24.219 | 384 | 226 | 12 | 41 | 418 | 93 | 417 | 7.87e-22 | 97.8 |
| MS.gene76285.t1 | AT4G26910 | 24.074 | 378 | 222 | 12 | 47 | 418 | 1 | 319 | 9.30e-21 | 93.6 |
| MS.gene76285.t1 | AT3G06850 | 25.134 | 374 | 231 | 9 | 51 | 410 | 87 | 425 | 1.83e-19 | 90.9 |
| MS.gene76285.t1 | AT3G06850 | 25.134 | 374 | 231 | 9 | 51 | 410 | 87 | 425 | 1.83e-19 | 90.9 |
| MS.gene76285.t1 | AT5G55070 | 34.884 | 129 | 82 | 2 | 281 | 409 | 281 | 407 | 1.31e-13 | 72.8 |
| MS.gene76285.t1 | AT5G55070 | 34.884 | 129 | 82 | 2 | 281 | 409 | 281 | 407 | 1.31e-13 | 72.8 |
Find 129 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTTCACGCTTTCCAATT+TGG | 0.148648 | 1.1:+78500120 | MS.gene76285:CDS |
| TGCTCCACCAGCTGCGATTC+CGG | 0.189762 | 1.1:+78498883 | MS.gene76285:CDS |
| CAACCAAATGAGTATAATTC+AGG | 0.242664 | 1.1:+78500011 | MS.gene76285:CDS |
| TGTGACGATGACTGCTATTT+TGG | 0.262165 | 1.1:+78499694 | MS.gene76285:CDS |
| AACTCCAAACATACCCAAAT+TGG | 0.269101 | 1.1:-78500134 | None:intergenic |
| GCGGATGTGGAGGCTGCTGC+TGG | 0.275235 | 1.1:+78498785 | MS.gene76285:CDS |
| AAAGTTCTTGCCATCTTTGC+AGG | 0.290313 | 1.1:-78499765 | None:intergenic |
| AGGAGGAGAGTGGTGAATTG+AGG | 0.310006 | 1.1:-78498215 | None:intergenic |
| GCTCCACCAGCTGCGATTCC+GGG | 0.315025 | 1.1:+78498884 | MS.gene76285:CDS |
| ACTTTCACGCTTTCCAATTT+GGG | 0.319099 | 1.1:+78500121 | MS.gene76285:CDS |
| CTTTCCAATTTGGGTATGTT+TGG | 0.319328 | 1.1:+78500130 | MS.gene76285:CDS |
| AAACCTGAATTATACTCATT+TGG | 0.322353 | 1.1:-78500014 | None:intergenic |
| CTTGATAACTCCAGTTCTTC+AGG | 0.323849 | 1.1:+78499838 | MS.gene76285:CDS |
| TGCGGCGAGGGGAGGAGCGG+TGG | 0.347960 | 1.1:-78498241 | None:intergenic |
| AACCTGGCCTGGTGGAAGTA+TGG | 0.348432 | 1.1:-78500170 | None:intergenic |
| CTGTTCCTACTTTCCGTGTT+GGG | 0.363238 | 1.1:+78498972 | MS.gene76285:CDS |
| TCAAGAGCATCGGTGATAAC+TGG | 0.374487 | 1.1:-78498998 | None:intergenic |
| CGCCGGAGGAGGAGAGGAAG+AGG | 0.399022 | 1.1:-78498585 | None:intergenic |
| GGAGGAGAGTGGTGAATTGA+GGG | 0.399212 | 1.1:-78498214 | None:intergenic |
| GTTGACATTGCTTCTGTAAA+CGG | 0.407465 | 1.1:+78498734 | MS.gene76285:CDS |
| CGGATTTGACGGATTTAGCC+TGG | 0.408800 | 1.1:-78498553 | None:intergenic |
| ACTGCCGCCGGTGGAGGTGG+TGG | 0.411169 | 1.1:-78498638 | None:intergenic |
| TTATCAGCATCCTGAAGAAC+TGG | 0.417467 | 1.1:-78499848 | None:intergenic |
| GCTCCGGTTGGTGCTCCAAT+TGG | 0.424384 | 1.1:+78498488 | MS.gene76285:CDS |
| GCCGCCGGTGGAGGTGGTGG+AGG | 0.424910 | 1.1:-78498635 | None:intergenic |
| TTGACATTGCTTCTGTAAAC+GGG | 0.427430 | 1.1:+78498735 | MS.gene76285:CDS |
| TTAACTGCCGCCGGTGGAGG+TGG | 0.428114 | 1.1:-78498641 | None:intergenic |
| GCCGGTGGAGGTGGTGGAGG+AGG | 0.429244 | 1.1:-78498632 | None:intergenic |
| AGTTCTTCAGGATGCTGATA+AGG | 0.430433 | 1.1:+78499850 | MS.gene76285:CDS |
| GGCGAGGGGAGGAGCGGTGG+GGG | 0.432308 | 1.1:-78498238 | None:intergenic |
| TTGCAGGTGGCATTAACAAC+TGG | 0.437102 | 1.1:-78499749 | None:intergenic |
| GCAGCAGAAGAACCACCTTT+CGG | 0.438712 | 1.1:-78498863 | None:intergenic |
| GCAGTCATCGTCACACCCTT+AGG | 0.441303 | 1.1:-78499686 | None:intergenic |
| TCCTCCTCCGGCGACTCCTC+AGG | 0.441707 | 1.1:+78498595 | MS.gene76285:CDS |
| TAGGATTACTCCGGCGGATG+TGG | 0.442153 | 1.1:+78498772 | MS.gene76285:CDS |
| TCTGTTCCTACTTTCCGTGT+TGG | 0.452700 | 1.1:+78498971 | MS.gene76285:CDS |
| CGGCGAGGGGAGGAGCGGTG+GGG | 0.453111 | 1.1:-78498239 | None:intergenic |
| ACTGTTCTTGCTGATGCAGA+TGG | 0.453492 | 1.1:+78500334 | MS.gene76285:CDS |
| AACAACGACACTATCACCTT+TGG | 0.458858 | 1.1:-78498381 | None:intergenic |
| GGAAGAAGAAGCGGATTTGA+CGG | 0.460996 | 1.1:-78498564 | None:intergenic |
| GTTAATGCCACCTGCAAAGA+TGG | 0.461294 | 1.1:+78499755 | MS.gene76285:CDS |
| TTCCTCTTCCTCTCCTCCTC+CGG | 0.468287 | 1.1:+78498583 | MS.gene76285:CDS |
| GTTTCAGCAAGTAAACCAAT+TGG | 0.469325 | 1.1:-78498503 | None:intergenic |
| TGTATCTGTTGTCTCAAAAG+TGG | 0.473862 | 1.1:+78499952 | MS.gene76285:CDS |
| TGCCATACTTCCACCAGGCC+AGG | 0.474712 | 1.1:+78500168 | MS.gene76285:CDS |
| GCGGCGAGGGGAGGAGCGGT+GGG | 0.476702 | 1.1:-78498240 | None:intergenic |
| TGCCCTGCGGCCATCGTATG+AGG | 0.478017 | 1.1:+78500510 | MS.gene76285:CDS |
| TTTGGAGAGAGTGTCGCCTT+CGG | 0.478453 | 1.1:-78498363 | None:intergenic |
| CGGATGTGGAGGCTGCTGCT+GGG | 0.484662 | 1.1:+78498786 | MS.gene76285:CDS |
| TCCTGAGGAGTCGCCGGAGG+AGG | 0.486371 | 1.1:-78498596 | None:intergenic |
| CTACCTCATACGATGGCCGC+AGG | 0.490769 | 1.1:-78500513 | None:intergenic |
| GTAAACGGGACTGGTCCGTT+TGG | 0.493993 | 1.1:+78498749 | MS.gene76285:CDS |
| GCCGCTATCGTTGTCGATGA+AGG | 0.494445 | 1.1:+78498458 | MS.gene76285:CDS |
| AAACCAATTGGAGCACCAAC+CGG | 0.494669 | 1.1:-78498491 | None:intergenic |
| CCTTTCGGCGCAGTCGGAGC+AGG | 0.504832 | 1.1:-78498848 | None:intergenic |
| CCGAGGGTAAAATCGTCTCT+TGG | 0.507291 | 1.1:+78498333 | MS.gene76285:CDS |
| GCTCCGACTGCGCCGAAAGG+TGG | 0.509066 | 1.1:+78498851 | MS.gene76285:CDS |
| AAATAAGCACTAACCTGGCC+TGG | 0.510203 | 1.1:-78500181 | None:intergenic |
| TTTGGCGAAGGCTGTAGCTA+TGG | 0.511396 | 1.1:+78499712 | MS.gene76285:CDS |
| TTCGCAAGCTTCTTCGCTTG+AGG | 0.512107 | 1.1:-78498701 | None:intergenic |
| CAGAGTGAAAAGTAAAATGC+TGG | 0.512136 | 1.1:+78500363 | MS.gene76285:CDS |
| GACTTAACTGCCGCCGGTGG+AGG | 0.513814 | 1.1:-78498644 | None:intergenic |
| TCCTCCTCCACCACCTCCAC+CGG | 0.517556 | 1.1:+78498631 | MS.gene76285:CDS |
| AGATTTCACGGATCTTAGCT+TGG | 0.518622 | 1.1:-78498283 | None:intergenic |
| CAAAAGTGGAAAGAACTAGT+TGG | 0.519897 | 1.1:+78499966 | MS.gene76285:CDS |
| CTCGAACCCGGAATCGCAGC+TGG | 0.528731 | 1.1:-78498890 | None:intergenic |
| CAATAGTAACATTAATGTTG+CGG | 0.528854 | 1.1:+78499793 | MS.gene76285:CDS |
| AAAGGATTTGCGGCGAGGGG+AGG | 0.531052 | 1.1:-78498249 | None:intergenic |
| GTGCTGGCATGAAGATTTCA+CGG | 0.531697 | 1.1:-78498295 | None:intergenic |
| TGCTGTTGCTAAGAATATGA+TGG | 0.531804 | 1.1:+78498940 | MS.gene76285:CDS |
| CGATGAAGGCGAAACAGCTC+CGG | 0.534516 | 1.1:+78498472 | MS.gene76285:CDS |
| AGAGGAAGAGGAAGAAGAAG+CGG | 0.534566 | 1.1:-78498573 | None:intergenic |
| GAAGCTTGCGAAGCAGCATA+AGG | 0.537108 | 1.1:+78498712 | MS.gene76285:CDS |
| AGGAAAAGGATTTGCGGCGA+GGG | 0.537627 | 1.1:-78498253 | None:intergenic |
| GTCATAGTGGAACTGAGTGC+TGG | 0.539153 | 1.1:-78498311 | None:intergenic |
| GGCCGCAGGGCAATGACAGA+AGG | 0.540157 | 1.1:-78500499 | None:intergenic |
| AGGAGTCGCCGGAGGAGGAG+AGG | 0.540356 | 1.1:-78498591 | None:intergenic |
| GAACCACCTTTCGGCGCAGT+CGG | 0.541376 | 1.1:-78498854 | None:intergenic |
| ACGGGACTGGTCCGTTTGGT+AGG | 0.545073 | 1.1:+78498753 | MS.gene76285:CDS |
| GTGGAAAGAACTAGTTGGAA+AGG | 0.549323 | 1.1:+78499971 | MS.gene76285:CDS |
| GGTGAAGAGTAATGTAGCTC+CGG | 0.553456 | 1.1:+78498817 | MS.gene76285:CDS |
| GTCGGAGCAGGAGTCGCCAC+CGG | 0.555438 | 1.1:-78498836 | None:intergenic |
| TATCGCTGAAGCTCAAGCCC+AGG | 0.558264 | 1.1:+78498535 | MS.gene76285:CDS |
| TCTTGATGCTTTCTATGAGA+AGG | 0.560121 | 1.1:+78499015 | MS.gene76285:CDS |
| GAAGTTTCCTGAGGAGTCGC+CGG | 0.562506 | 1.1:-78498602 | None:intergenic |
| GATTACTCCGGCGGATGTGG+AGG | 0.566437 | 1.1:+78498775 | MS.gene76285:CDS |
| GGATACCCAACACGGAAAGT+AGG | 0.566850 | 1.1:-78498977 | None:intergenic |
| CCTGCTCCGACTGCGCCGAA+AGG | 0.568690 | 1.1:+78498848 | MS.gene76285:CDS |
| GGAAAAGGATTTGCGGCGAG+GGG | 0.568740 | 1.1:-78498252 | None:intergenic |
| ATTGCTTCTGTAAACGGGAC+TGG | 0.574531 | 1.1:+78498740 | MS.gene76285:CDS |
| GCAGCAGCCTCCACATCCGC+CGG | 0.578668 | 1.1:-78498782 | None:intergenic |
| ATTTGCGGCGAGGGGAGGAG+CGG | 0.582187 | 1.1:-78498244 | None:intergenic |
| GGATTTGACGGATTTAGCCT+GGG | 0.588827 | 1.1:-78498552 | None:intergenic |
| GAGGAGAGTGGTGAATTGAG+GGG | 0.588927 | 1.1:-78498213 | None:intergenic |
| TCCTCCACCACCTCCACCGG+CGG | 0.594386 | 1.1:+78498634 | MS.gene76285:CDS |
| GCCGGAGTAATCCTACCAAA+CGG | 0.596459 | 1.1:-78498764 | None:intergenic |
| TAAGGTTCTACCTCATACGA+TGG | 0.597682 | 1.1:-78500520 | None:intergenic |
| GTTCTTGCCATCTTTGCAGG+TGG | 0.598180 | 1.1:-78499762 | None:intergenic |
| CATTAATGTTGCGGTTGCTG+TGG | 0.599216 | 1.1:+78499802 | MS.gene76285:CDS |
| GCGGTTGCTGTGGCAATCAA+CGG | 0.599221 | 1.1:+78499812 | MS.gene76285:CDS |
| TCCGTTTGGTAGGATTACTC+CGG | 0.603724 | 1.1:+78498763 | MS.gene76285:CDS |
| GGCTGCTGCTGGGATTACAC+TGG | 0.608806 | 1.1:+78498796 | MS.gene76285:CDS |
| CTTCTTCGCTTGAGGTGTCG+CGG | 0.610118 | 1.1:-78498693 | None:intergenic |
| GCCTTCATCGACAACGATAG+CGG | 0.618056 | 1.1:-78498459 | None:intergenic |
| TCTGCATCAGCAAGAACAGT+GGG | 0.618200 | 1.1:-78500331 | None:intergenic |
| AAGGAAAAGGATTTGCGGCG+AGG | 0.618617 | 1.1:-78498254 | None:intergenic |
| ACTCAGTTCCACTATGACCG+AGG | 0.619876 | 1.1:+78498316 | MS.gene76285:CDS |
| GTCTCTTGGATCAAATCCGA+AGG | 0.623986 | 1.1:+78498347 | MS.gene76285:CDS |
| GAAGAGTAATGTAGCTCCGG+TGG | 0.629192 | 1.1:+78498820 | MS.gene76285:CDS |
| GAAACAGACTTAACTGCCGC+CGG | 0.630082 | 1.1:-78498650 | None:intergenic |
| GACGTTGAAACTTTCTACGA+CGG | 0.630695 | 1.1:+78498428 | MS.gene76285:CDS |
| TGAATCTGATAAAGCTGACA+TGG | 0.631095 | 1.1:+78498406 | MS.gene76285:CDS |
| ATAGAAAGCATCAAGAGCAT+CGG | 0.631130 | 1.1:-78499008 | None:intergenic |
| GTTTCCTGAGGAGTCGCCGG+AGG | 0.633462 | 1.1:-78498599 | None:intergenic |
| ACAGACTTAACTGCCGCCGG+TGG | 0.635188 | 1.1:-78498647 | None:intergenic |
| GAACCCGGAATCGCAGCTGG+TGG | 0.635209 | 1.1:-78498887 | None:intergenic |
| TTTGATGCCATACTTCCACC+AGG | 0.635423 | 1.1:+78500163 | MS.gene76285:CDS |
| CTCAGTTCCACTATGACCGA+GGG | 0.637079 | 1.1:+78498317 | MS.gene76285:CDS |
| GTTTGGTAGGATTACTCCGG+CGG | 0.637694 | 1.1:+78498766 | MS.gene76285:CDS |
| TACCTCATACGATGGCCGCA+GGG | 0.638281 | 1.1:-78500512 | None:intergenic |
| GAAGGCGACACTCTCTCCAA+AGG | 0.645069 | 1.1:+78498365 | MS.gene76285:CDS |
| GAAGGCGAAACAGCTCCGGT+TGG | 0.647729 | 1.1:+78498476 | MS.gene76285:CDS |
| TAAGCACTAACCTGGCCTGG+TGG | 0.654901 | 1.1:-78500178 | None:intergenic |
| AAAGCAACATTACTCGAACC+CGG | 0.665722 | 1.1:-78498902 | None:intergenic |
| GGAGACTGAGAAGTTTCCTG+AGG | 0.667713 | 1.1:-78498611 | None:intergenic |
| ATCTGCATCAGCAAGAACAG+TGG | 0.669175 | 1.1:-78500332 | None:intergenic |
| TGATAACTGGATACCCAACA+CGG | 0.682536 | 1.1:-78498985 | None:intergenic |
| GTTGCTGTGGCAATCAACGG+TGG | 0.689072 | 1.1:+78499815 | MS.gene76285:CDS |
| GGCCTTCTGTCATTGCCCTG+CGG | 0.712543 | 1.1:+78500497 | MS.gene76285:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr1.1:78499342-78499361 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr1.1:78499343-78499362 | None:intergenic | 10.0% |
| !!! | ATTGTTTAATTTGAAAATTT+AGG | + | chr1.1:78499580-78499599 | MS.gene76285:intron | 10.0% |
| !! | AATAGTATTATTATTGCATT+GGG | + | chr1.1:78499135-78499154 | MS.gene76285:intron | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr1.1:78499341-78499360 | None:intergenic | 15.0% |
| !! | ATTGAATATTATTGTTGTAT+TGG | + | chr1.1:78499622-78499641 | MS.gene76285:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr1.1:78499277-78499296 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr1.1:78499278-78499297 | None:intergenic | 15.0% |
| !!! | AACATTTTCTTAATAGAATA+AGG | + | chr1.1:78500476-78500495 | MS.gene76285:intron | 15.0% |
| !!! | TTTTTATTTTATTTTGGTGA+TGG | + | chr1.1:78499099-78499118 | MS.gene76285:intron | 15.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr1.1:78499318-78499337 | None:intergenic | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | - | chr1.1:78499245-78499264 | None:intergenic | 20.0% |
| !! | ATAGTATTATTATTGCATTG+GGG | + | chr1.1:78499136-78499155 | MS.gene76285:intron | 20.0% |
| !! | GAATAGTATTATTATTGCAT+TGG | + | chr1.1:78499134-78499153 | MS.gene76285:intron | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | - | chr1.1:78499244-78499263 | None:intergenic | 20.0% |
| !! | TAATTTGAAAATTTAGGTGA+TGG | + | chr1.1:78499586-78499605 | MS.gene76285:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr1.1:78499208-78499227 | None:intergenic | 20.0% |
| !!! | TAAACTTGTCATTTATTTCA+GGG | + | chr1.1:78500280-78500299 | MS.gene76285:intron | 20.0% |
| !!! | TTAAACTTGTCATTTATTTC+AGG | + | chr1.1:78500279-78500298 | MS.gene76285:intron | 20.0% |
| ! | AAACCTGAATTATACTCATT+TGG | - | chr1.1:78500017-78500036 | None:intergenic | 25.0% |
| ! | CAATAGTAACATTAATGTTG+CGG | + | chr1.1:78499793-78499812 | MS.gene76285:CDS | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr1.1:78499319-78499338 | None:intergenic | 25.0% |
| !! | AAACTTGTCATTTATTTCAG+GGG | + | chr1.1:78500281-78500300 | MS.gene76285:intron | 25.0% |
| !! | CAATTTCATTTGTTGATTGT+AGG | + | chr1.1:78499908-78499927 | MS.gene76285:intron | 25.0% |
| !! | GATGTTGAATTTTTCTTTTC+AGG | + | chr1.1:78499658-78499677 | MS.gene76285:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr1.1:78499209-78499228 | None:intergenic | 25.0% |
| !!! | TATTACTTGAACGTTTTAAC+CGG | + | chr1.1:78500069-78500088 | MS.gene76285:intron | 25.0% |
| !!! | TCATTTTTTCAAATTACCTC+CGG | + | chr1.1:78499503-78499522 | MS.gene76285:intron | 25.0% |
| AAACAGGCACAATTAATATC+CGG | - | chr1.1:78500091-78500110 | None:intergenic | 30.0% | |
| ATTAGAAATAAGCACTAACC+TGG | - | chr1.1:78500189-78500208 | None:intergenic | 30.0% | |
| CAACCAAATGAGTATAATTC+AGG | + | chr1.1:78500011-78500030 | MS.gene76285:CDS | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr1.1:78499334-78499353 | None:intergenic | 30.0% | |
| TGTCATCATCTATAAAGCAT+TGG | - | chr1.1:78499561-78499580 | None:intergenic | 30.0% | |
| TTCGTTTATGTTATCACTCA+GGG | - | chr1.1:78500458-78500477 | None:intergenic | 30.0% | |
| ! | AACTTGTCATTTATTTCAGG+GGG | + | chr1.1:78500282-78500301 | MS.gene76285:intron | 30.0% |
| ! | GGTTTGTTTATTGTTGTTGT+TGG | + | chr1.1:78500032-78500051 | MS.gene76285:intron | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | - | chr1.1:78499231-78499250 | None:intergenic | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | - | chr1.1:78499230-78499249 | None:intergenic | 30.0% |
| !! | TGGCTTATTTTCTAGCAATT+TGG | + | chr1.1:78500238-78500257 | MS.gene76285:intron | 30.0% |
| !! | TTGAAAATTTAGGTGATGGA+TGG | + | chr1.1:78499590-78499609 | MS.gene76285:intron | 30.0% |
| !! | TTTTGAAGGAAAAGGATTTG+CGG | - | chr1.1:78498262-78498281 | None:intergenic | 30.0% |
| !!! | AGCAATTTGGACCTTTTTTT+GGG | + | chr1.1:78500251-78500270 | MS.gene76285:intron | 30.0% |
| !!! | CATTTTTTCAAATTACCTCC+GGG | + | chr1.1:78499504-78499523 | MS.gene76285:intron | 30.0% |
| !!! | TAGCAATTTGGACCTTTTTT+TGG | + | chr1.1:78500250-78500269 | MS.gene76285:intron | 30.0% |
| AACTCCAAACATACCCAAAT+TGG | - | chr1.1:78500137-78500156 | None:intergenic | 35.0% | |
| AACTTTCACGCTTTCCAATT+TGG | + | chr1.1:78500120-78500139 | MS.gene76285:CDS | 35.0% | |
| ACTTTCACGCTTTCCAATTT+GGG | + | chr1.1:78500121-78500140 | MS.gene76285:CDS | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr1.1:78499195-78499214 | None:intergenic | 35.0% | |
| ATTGGCACATACATAGACAT+AGG | - | chr1.1:78499543-78499562 | None:intergenic | 35.0% | |
| CAAAAGTGGAAAGAACTAGT+TGG | + | chr1.1:78499966-78499985 | MS.gene76285:CDS | 35.0% | |
| CAGAGTGAAAAGTAAAATGC+TGG | + | chr1.1:78500363-78500382 | MS.gene76285:CDS | 35.0% | |
| CTTTCCAATTTGGGTATGTT+TGG | + | chr1.1:78500130-78500149 | MS.gene76285:CDS | 35.0% | |
| GTTCGTTTATGTTATCACTC+AGG | - | chr1.1:78500459-78500478 | None:intergenic | 35.0% | |
| GTTGACATTGCTTCTGTAAA+CGG | + | chr1.1:78498734-78498753 | MS.gene76285:CDS | 35.0% | |
| GTTTAACACCTCCCAAAAAA+AGG | - | chr1.1:78500265-78500284 | None:intergenic | 35.0% | |
| GTTTCAGCAAGTAAACCAAT+TGG | - | chr1.1:78498506-78498525 | None:intergenic | 35.0% | |
| TCTTGATGCTTTCTATGAGA+AGG | + | chr1.1:78499015-78499034 | MS.gene76285:CDS | 35.0% | |
| TGAATCTGATAAAGCTGACA+TGG | + | chr1.1:78498406-78498425 | MS.gene76285:CDS | 35.0% | |
| TGCTGTTGCTAAGAATATGA+TGG | + | chr1.1:78498940-78498959 | MS.gene76285:CDS | 35.0% | |
| TGTATCTGTTGTCTCAAAAG+TGG | + | chr1.1:78499952-78499971 | MS.gene76285:CDS | 35.0% | |
| TTGACATTGCTTCTGTAAAC+GGG | + | chr1.1:78498735-78498754 | MS.gene76285:CDS | 35.0% | |
| ! | TATTGTTGTTGTTGGCTATC+TGG | + | chr1.1:78500040-78500059 | MS.gene76285:intron | 35.0% |
| ! | TGTTAGTTTGAGAGATTCTC+TGG | + | chr1.1:78500218-78500237 | MS.gene76285:intron | 35.0% |
| !! | AAATTTAGGTGATGGATGGA+TGG | + | chr1.1:78499594-78499613 | MS.gene76285:intron | 35.0% |
| !! | AGCTTGGATTTTGAAGGAAA+AGG | - | chr1.1:78498270-78498289 | None:intergenic | 35.0% |
| !! | ATAGAAAGCATCAAGAGCAT+CGG | - | chr1.1:78499011-78499030 | None:intergenic | 35.0% |
| !! | GATCTTAGCTTGGATTTTGA+AGG | - | chr1.1:78498276-78498295 | None:intergenic | 35.0% |
| !!! | AATTTGGACCTTTTTTTGGG+AGG | + | chr1.1:78500254-78500273 | MS.gene76285:intron | 35.0% |
| !!! | TCTTTTCAGGTGAAACCTAA+GGG | + | chr1.1:78499671-78499690 | MS.gene76285:intron | 35.0% |
| !!! | TTCTTTTCAGGTGAAACCTA+AGG | + | chr1.1:78499670-78499689 | MS.gene76285:intron | 35.0% |
| AAAGCAACATTACTCGAACC+CGG | - | chr1.1:78498905-78498924 | None:intergenic | 40.0% | |
| AAAGTTCTTGCCATCTTTGC+AGG | - | chr1.1:78499768-78499787 | None:intergenic | 40.0% | |
| AACAACGACACTATCACCTT+TGG | - | chr1.1:78498384-78498403 | None:intergenic | 40.0% | |
| AATCTGTGTGAAATGAGCCA+AGG | + | chr1.1:78499362-78499381 | MS.gene76285:intron | 40.0% | |
| AGATTTCACGGATCTTAGCT+TGG | - | chr1.1:78498286-78498305 | None:intergenic | 40.0% | |
| AGCCAAGGGGTCAAATAAAT+TGG | + | chr1.1:78499377-78499396 | MS.gene76285:intron | 40.0% | |
| AGGGGTCAAATAAATTGGGA+CGG | + | chr1.1:78499382-78499401 | MS.gene76285:intron | 40.0% | |
| AGTTCTTCAGGATGCTGATA+AGG | + | chr1.1:78499850-78499869 | MS.gene76285:CDS | 40.0% | |
| ATCTGTGTGAAATGAGCCAA+GGG | + | chr1.1:78499363-78499382 | MS.gene76285:intron | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr1.1:78499194-78499213 | None:intergenic | 40.0% | |
| GACGTTGAAACTTTCTACGA+CGG | + | chr1.1:78498428-78498447 | MS.gene76285:CDS | 40.0% | |
| GCATGAATGCATAAACAGCA+AGG | - | chr1.1:78500413-78500432 | None:intergenic | 40.0% | |
| GCCAAGGGGTCAAATAAATT+GGG | + | chr1.1:78499378-78499397 | MS.gene76285:intron | 40.0% | |
| GTAGGTTGTTGTGTTGTAGT+TGG | + | chr1.1:78499926-78499945 | MS.gene76285:intron | 40.0% | |
| GTCAAATAAATTGGGACGGA+GGG | + | chr1.1:78499386-78499405 | MS.gene76285:intron | 40.0% | |
| GTGGAAAGAACTAGTTGGAA+AGG | + | chr1.1:78499971-78499990 | MS.gene76285:CDS | 40.0% | |
| TCCCAATTTATTTGACCCCT+TGG | - | chr1.1:78499382-78499401 | None:intergenic | 40.0% | |
| TGATAACTGGATACCCAACA+CGG | - | chr1.1:78498988-78499007 | None:intergenic | 40.0% | |
| TTATCAGCATCCTGAAGAAC+TGG | - | chr1.1:78499851-78499870 | None:intergenic | 40.0% | |
| TTTATTTCAGGGGGCTATCA+TGG | + | chr1.1:78500291-78500310 | MS.gene76285:intron | 40.0% | |
| ! | CTTCTAATTTGAGGCGTGTT+TGG | + | chr1.1:78499443-78499462 | MS.gene76285:intron | 40.0% |
| ! | CTTGATAACTCCAGTTCTTC+AGG | + | chr1.1:78499838-78499857 | MS.gene76285:CDS | 40.0% |
| ! | GGTGATTTTCTTCGGATCAT+CGG | - | chr1.1:78498675-78498694 | None:intergenic | 40.0% |
| !! | GCCTCAAATTAGAAGTGTCA+GGG | - | chr1.1:78499438-78499457 | None:intergenic | 40.0% |
| !! | TGTGACGATGACTGCTATTT+TGG | + | chr1.1:78499694-78499713 | MS.gene76285:CDS | 40.0% |
| AAATAAGCACTAACCTGGCC+TGG | - | chr1.1:78500184-78500203 | None:intergenic | 45.0% | |
| ACTGTTCTTGCTGATGCAGA+TGG | + | chr1.1:78500334-78500353 | MS.gene76285:CDS | 45.0% | |
| AGAGGAAGAGGAAGAAGAAG+CGG | - | chr1.1:78498576-78498595 | None:intergenic | 45.0% | |
| ATCTGCATCAGCAAGAACAG+TGG | - | chr1.1:78500335-78500354 | None:intergenic | 45.0% | |
| ATTGCTTCTGTAAACGGGAC+TGG | + | chr1.1:78498740-78498759 | MS.gene76285:CDS | 45.0% | |
| CATTAATGTTGCGGTTGCTG+TGG | + | chr1.1:78499802-78499821 | MS.gene76285:CDS | 45.0% | |
| CTGTTCCTACTTTCCGTGTT+GGG | + | chr1.1:78498972-78498991 | MS.gene76285:CDS | 45.0% | |
| GCCCTGACACTTCTAATTTG+AGG | + | chr1.1:78499434-78499453 | MS.gene76285:intron | 45.0% | |
| GGTCAAATAAATTGGGACGG+AGG | + | chr1.1:78499385-78499404 | MS.gene76285:intron | 45.0% | |
| GGTGAAGAGTAATGTAGCTC+CGG | + | chr1.1:78498817-78498836 | MS.gene76285:CDS | 45.0% | |
| GTCTCTTGGATCAAATCCGA+AGG | + | chr1.1:78498347-78498366 | MS.gene76285:CDS | 45.0% | |
| GTTAATGCCACCTGCAAAGA+TGG | + | chr1.1:78499755-78499774 | MS.gene76285:CDS | 45.0% | |
| TCCGTTTGGTAGGATTACTC+CGG | + | chr1.1:78498763-78498782 | MS.gene76285:CDS | 45.0% | |
| TCTGCATCAGCAAGAACAGT+GGG | - | chr1.1:78500334-78500353 | None:intergenic | 45.0% | |
| TCTGTGTGAAATGAGCCAAG+GGG | + | chr1.1:78499364-78499383 | MS.gene76285:intron | 45.0% | |
| TCTGTTCCTACTTTCCGTGT+TGG | + | chr1.1:78498971-78498990 | MS.gene76285:CDS | 45.0% | |
| TTGCAGGTGGCATTAACAAC+TGG | - | chr1.1:78499752-78499771 | None:intergenic | 45.0% | |
| TTTGATGCCATACTTCCACC+AGG | + | chr1.1:78500163-78500182 | MS.gene76285:CDS | 45.0% | |
| ! | AAACCAATTGGAGCACCAAC+CGG | - | chr1.1:78498494-78498513 | None:intergenic | 45.0% |
| ! | CCAAGAGACGATTTTACCCT+CGG | - | chr1.1:78498336-78498355 | None:intergenic | 45.0% |
| ! | GATTTTACCCTCGGTCATAG+TGG | - | chr1.1:78498327-78498346 | None:intergenic | 45.0% |
| ! | GGAAGAAGAAGCGGATTTGA+CGG | - | chr1.1:78498567-78498586 | None:intergenic | 45.0% |
| ! | GTGCTGGCATGAAGATTTCA+CGG | - | chr1.1:78498298-78498317 | None:intergenic | 45.0% |
| !! | CGCCTCAAATTAGAAGTGTC+AGG | - | chr1.1:78499439-78499458 | None:intergenic | 45.0% |
| !! | GGATTTGACGGATTTAGCCT+GGG | - | chr1.1:78498555-78498574 | None:intergenic | 45.0% |
| !! | TCAAGAGCATCGGTGATAAC+TGG | - | chr1.1:78499001-78499020 | None:intergenic | 45.0% |
| !!! | GATGACTGCTATTTTGGCGA+AGG | + | chr1.1:78499700-78499719 | MS.gene76285:CDS | 45.0% |
| !!! | TGATTTTTTTTATTTTATTT+TGG | + | chr1.1:78499093-78499112 | MS.gene76285:intron | 5.0% |
| AAGGAAAAGGATTTGCGGCG+AGG | - | chr1.1:78498257-78498276 | None:intergenic | 50.0% | |
| AATGATTACTCCCTCCGTCC+CGG | + | chr1.1:78499173-78499192 | MS.gene76285:intron | 50.0% | |
| AATTGTGCCTGTTTGCCTGC+AGG | + | chr1.1:78500097-78500116 | MS.gene76285:intron | 50.0% | |
| ACTCAGTTCCACTATGACCG+AGG | + | chr1.1:78498316-78498335 | MS.gene76285:CDS | 50.0% | |
| AGGAAAAGGATTTGCGGCGA+GGG | - | chr1.1:78498256-78498275 | None:intergenic | 50.0% | |
| AGGAGGAGAGTGGTGAATTG+AGG | - | chr1.1:78498218-78498237 | None:intergenic | 50.0% | |
| ATAGGACACACGTCAACACC+CGG | - | chr1.1:78499525-78499544 | None:intergenic | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr1.1:78499190-78499209 | None:intergenic | 50.0% | |
| CCGAGGGTAAAATCGTCTCT+TGG | + | chr1.1:78498333-78498352 | MS.gene76285:CDS | 50.0% | |
| CTCAGTTCCACTATGACCGA+GGG | + | chr1.1:78498317-78498336 | MS.gene76285:CDS | 50.0% | |
| GAAACAGACTTAACTGCCGC+CGG | - | chr1.1:78498653-78498672 | None:intergenic | 50.0% | |
| GAAAGTTCCTGCAGGCAAAC+AGG | - | chr1.1:78500107-78500126 | None:intergenic | 50.0% | |
| GAAGAGTAATGTAGCTCCGG+TGG | + | chr1.1:78498820-78498839 | MS.gene76285:CDS | 50.0% | |
| GAAGCTTGCGAAGCAGCATA+AGG | + | chr1.1:78498712-78498731 | MS.gene76285:CDS | 50.0% | |
| GAGGAGAGTGGTGAATTGAG+GGG | - | chr1.1:78498216-78498235 | None:intergenic | 50.0% | |
| GCAGCAGAAGAACCACCTTT+CGG | - | chr1.1:78498866-78498885 | None:intergenic | 50.0% | |
| GCCGGAGTAATCCTACCAAA+CGG | - | chr1.1:78498767-78498786 | None:intergenic | 50.0% | |
| GCCTTCATCGACAACGATAG+CGG | - | chr1.1:78498462-78498481 | None:intergenic | 50.0% | |
| GGAGACTGAGAAGTTTCCTG+AGG | - | chr1.1:78498614-78498633 | None:intergenic | 50.0% | |
| GGAGGAGAGTGGTGAATTGA+GGG | - | chr1.1:78498217-78498236 | None:intergenic | 50.0% | |
| GGATACCCAACACGGAAAGT+AGG | - | chr1.1:78498980-78498999 | None:intergenic | 50.0% | |
| GTTCTTGCCATCTTTGCAGG+TGG | - | chr1.1:78499765-78499784 | None:intergenic | 50.0% | |
| GTTTGGTAGGATTACTCCGG+CGG | + | chr1.1:78498766-78498785 | MS.gene76285:CDS | 50.0% | |
| TTCGCAAGCTTCTTCGCTTG+AGG | - | chr1.1:78498704-78498723 | None:intergenic | 50.0% | |
| TTTGGCGAAGGCTGTAGCTA+TGG | + | chr1.1:78499712-78499731 | MS.gene76285:CDS | 50.0% | |
| ! | GAAAGCGTGAAAGTTCCTGC+AGG | - | chr1.1:78500115-78500134 | None:intergenic | 50.0% |
| ! | GTCATAGTGGAACTGAGTGC+TGG | - | chr1.1:78498314-78498333 | None:intergenic | 50.0% |
| !! | CGGATTTGACGGATTTAGCC+TGG | - | chr1.1:78498556-78498575 | None:intergenic | 50.0% |
| !! | GGTGTCGCGGTGATTTTCTT+CGG | - | chr1.1:78498683-78498702 | None:intergenic | 50.0% |
| !! | TTTGGAGAGAGTGTCGCCTT+CGG | - | chr1.1:78498366-78498385 | None:intergenic | 50.0% |
| AACCTGGCCTGGTGGAAGTA+TGG | - | chr1.1:78500173-78500192 | None:intergenic | 55.0% | |
| CGATGAAGGCGAAACAGCTC+CGG | + | chr1.1:78498472-78498491 | MS.gene76285:CDS | 55.0% | |
| GAAGGCGACACTCTCTCCAA+AGG | + | chr1.1:78498365-78498384 | MS.gene76285:CDS | 55.0% | |
| GAAGTTTCCTGAGGAGTCGC+CGG | - | chr1.1:78498605-78498624 | None:intergenic | 55.0% | |
| GCAGTCATCGTCACACCCTT+AGG | - | chr1.1:78499689-78499708 | None:intergenic | 55.0% | |
| GCCGCTATCGTTGTCGATGA+AGG | + | chr1.1:78498458-78498477 | MS.gene76285:CDS | 55.0% | |
| GCGGTTGCTGTGGCAATCAA+CGG | + | chr1.1:78499812-78499831 | MS.gene76285:CDS | 55.0% | |
| GGAAAAGGATTTGCGGCGAG+GGG | - | chr1.1:78498255-78498274 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr1.1:78499186-78499205 | None:intergenic | 55.0% | |
| GTTGCTGTGGCAATCAACGG+TGG | + | chr1.1:78499815-78499834 | MS.gene76285:CDS | 55.0% | |
| TAAGCACTAACCTGGCCTGG+TGG | - | chr1.1:78500181-78500200 | None:intergenic | 55.0% | |
| TAGGATTACTCCGGCGGATG+TGG | + | chr1.1:78498772-78498791 | MS.gene76285:CDS | 55.0% | |
| TATCGCTGAAGCTCAAGCCC+AGG | + | chr1.1:78498535-78498554 | MS.gene76285:CDS | 55.0% | |
| TTCCTCTTCCTCTCCTCCTC+CGG | + | chr1.1:78498583-78498602 | MS.gene76285:CDS | 55.0% | |
| !! | CTTCTTCGCTTGAGGTGTCG+CGG | - | chr1.1:78498696-78498715 | None:intergenic | 55.0% |
| !! | GTAAACGGGACTGGTCCGTT+TGG | + | chr1.1:78498749-78498768 | MS.gene76285:CDS | 55.0% |
| AAAGGATTTGCGGCGAGGGG+AGG | - | chr1.1:78498252-78498271 | None:intergenic | 60.0% | |
| ACAGACTTAACTGCCGCCGG+TGG | - | chr1.1:78498650-78498669 | None:intergenic | 60.0% | |
| CAGGGGGCTATCATGGCTGT+TGG | + | chr1.1:78500298-78500317 | MS.gene76285:intron | 60.0% | |
| GAACCACCTTTCGGCGCAGT+CGG | - | chr1.1:78498857-78498876 | None:intergenic | 60.0% | |
| GAAGGCGAAACAGCTCCGGT+TGG | + | chr1.1:78498476-78498495 | MS.gene76285:CDS | 60.0% | |
| GATTACTCCGGCGGATGTGG+AGG | + | chr1.1:78498775-78498794 | MS.gene76285:CDS | 60.0% | |
| GGCCTTCTGTCATTGCCCTG+CGG | + | chr1.1:78500497-78500516 | MS.gene76285:CDS | 60.0% | |
| GGCTGCTGCTGGGATTACAC+TGG | + | chr1.1:78498796-78498815 | MS.gene76285:CDS | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr1.1:78499187-78499206 | None:intergenic | 60.0% | |
| TGCCATACTTCCACCAGGCC+AGG | + | chr1.1:78500168-78500187 | MS.gene76285:CDS | 60.0% | |
| TGCTCCACCAGCTGCGATTC+CGG | + | chr1.1:78498883-78498902 | MS.gene76285:CDS | 60.0% | |
| ! | GCTCCGGTTGGTGCTCCAAT+TGG | + | chr1.1:78498488-78498507 | MS.gene76285:CDS | 60.0% |
| !! | ACGGGACTGGTCCGTTTGGT+AGG | + | chr1.1:78498753-78498772 | MS.gene76285:CDS | 60.0% |
| ATTTGCGGCGAGGGGAGGAG+CGG | - | chr1.1:78498247-78498266 | None:intergenic | 65.0% | |
| CGGATGTGGAGGCTGCTGCT+GGG | + | chr1.1:78498786-78498805 | MS.gene76285:CDS | 65.0% | |
| CTCGAACCCGGAATCGCAGC+TGG | - | chr1.1:78498893-78498912 | None:intergenic | 65.0% | |
| GAACCCGGAATCGCAGCTGG+TGG | - | chr1.1:78498890-78498909 | None:intergenic | 65.0% | |
| GACTTAACTGCCGCCGGTGG+AGG | - | chr1.1:78498647-78498666 | None:intergenic | 65.0% | |
| GCTCCACCAGCTGCGATTCC+GGG | + | chr1.1:78498884-78498903 | MS.gene76285:CDS | 65.0% | |
| GGACACACGTCAACACCCGG+AGG | - | chr1.1:78499522-78499541 | None:intergenic | 65.0% | |
| GGCCGCAGGGCAATGACAGA+AGG | - | chr1.1:78500502-78500521 | None:intergenic | 65.0% | |
| GTTTCCTGAGGAGTCGCCGG+AGG | - | chr1.1:78498602-78498621 | None:intergenic | 65.0% | |
| TCCTCCTCCACCACCTCCAC+CGG | + | chr1.1:78498631-78498650 | MS.gene76285:CDS | 65.0% | |
| TTAACTGCCGCCGGTGGAGG+TGG | - | chr1.1:78498644-78498663 | None:intergenic | 65.0% | |
| AGGAGTCGCCGGAGGAGGAG+AGG | - | chr1.1:78498594-78498613 | None:intergenic | 70.0% | |
| CCTGCTCCGACTGCGCCGAA+AGG | + | chr1.1:78498848-78498867 | MS.gene76285:CDS | 70.0% | |
| CCTTTCGGCGCAGTCGGAGC+AGG | - | chr1.1:78498851-78498870 | None:intergenic | 70.0% | |
| CGCCGGAGGAGGAGAGGAAG+AGG | - | chr1.1:78498588-78498607 | None:intergenic | 70.0% | |
| GCAGCAGCCTCCACATCCGC+CGG | - | chr1.1:78498785-78498804 | None:intergenic | 70.0% | |
| GCGGATGTGGAGGCTGCTGC+TGG | + | chr1.1:78498785-78498804 | MS.gene76285:CDS | 70.0% | |
| GCTCCGACTGCGCCGAAAGG+TGG | + | chr1.1:78498851-78498870 | MS.gene76285:CDS | 70.0% | |
| GTCGGAGCAGGAGTCGCCAC+CGG | - | chr1.1:78498839-78498858 | None:intergenic | 70.0% | |
| TCCTCCACCACCTCCACCGG+CGG | + | chr1.1:78498634-78498653 | MS.gene76285:CDS | 70.0% | |
| TCCTCCTCCGGCGACTCCTC+AGG | + | chr1.1:78498595-78498614 | MS.gene76285:CDS | 70.0% | |
| TCCTGAGGAGTCGCCGGAGG+AGG | - | chr1.1:78498599-78498618 | None:intergenic | 70.0% | |
| ACTGCCGCCGGTGGAGGTGG+TGG | - | chr1.1:78498641-78498660 | None:intergenic | 75.0% | |
| GCGGTGGGGGAGGAGGAGAG+TGG | - | chr1.1:78498228-78498247 | None:intergenic | 75.0% | |
| !! | GCCGGTGGAGGTGGTGGAGG+AGG | - | chr1.1:78498635-78498654 | None:intergenic | 75.0% |
| ! | CGGCGAGGGGAGGAGCGGTG+GGG | - | chr1.1:78498242-78498261 | None:intergenic | 80.0% |
| ! | GAGGGGAGGAGCGGTGGGGG+AGG | - | chr1.1:78498238-78498257 | None:intergenic | 80.0% |
| ! | GCGGCGAGGGGAGGAGCGGT+GGG | - | chr1.1:78498243-78498262 | None:intergenic | 80.0% |
| ! | GGCGAGGGGAGGAGCGGTGG+GGG | - | chr1.1:78498241-78498260 | None:intergenic | 80.0% |
| ! | GGGAGGAGCGGTGGGGGAGG+AGG | - | chr1.1:78498235-78498254 | None:intergenic | 80.0% |
| ! | TGCGGCGAGGGGAGGAGCGG+TGG | - | chr1.1:78498244-78498263 | None:intergenic | 80.0% |
| !! | GCCGCCGGTGGAGGTGGTGG+AGG | - | chr1.1:78498638-78498657 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 78498179 | 78500530 | 78498179 | ID=MS.gene76285 |
| chr1.1 | mRNA | 78498179 | 78500530 | 78498179 | ID=MS.gene76285.t1;Parent=MS.gene76285 |
| chr1.1 | exon | 78498179 | 78499036 | 78498179 | ID=MS.gene76285.t1.exon1;Parent=MS.gene76285.t1 |
| chr1.1 | CDS | 78498179 | 78499036 | 78498179 | ID=cds.MS.gene76285.t1;Parent=MS.gene76285.t1 |
| chr1.1 | exon | 78499680 | 78499871 | 78499680 | ID=MS.gene76285.t1.exon2;Parent=MS.gene76285.t1 |
| chr1.1 | CDS | 78499680 | 78499871 | 78499680 | ID=cds.MS.gene76285.t1;Parent=MS.gene76285.t1 |
| chr1.1 | exon | 78499945 | 78500032 | 78499945 | ID=MS.gene76285.t1.exon3;Parent=MS.gene76285.t1 |
| chr1.1 | CDS | 78499945 | 78500032 | 78499945 | ID=cds.MS.gene76285.t1;Parent=MS.gene76285.t1 |
| chr1.1 | exon | 78500119 | 78500189 | 78500119 | ID=MS.gene76285.t1.exon4;Parent=MS.gene76285.t1 |
| chr1.1 | CDS | 78500119 | 78500189 | 78500119 | ID=cds.MS.gene76285.t1;Parent=MS.gene76285.t1 |
| chr1.1 | exon | 78500301 | 78500384 | 78500301 | ID=MS.gene76285.t1.exon5;Parent=MS.gene76285.t1 |
| chr1.1 | CDS | 78500301 | 78500384 | 78500301 | ID=cds.MS.gene76285.t1;Parent=MS.gene76285.t1 |
| chr1.1 | exon | 78500492 | 78500530 | 78500492 | ID=MS.gene76285.t1.exon6;Parent=MS.gene76285.t1 |
| chr1.1 | CDS | 78500492 | 78500530 | 78500492 | ID=cds.MS.gene76285.t1;Parent=MS.gene76285.t1 |
| Gene Sequence |
| Protein sequence |
