Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76413.t1 | XP_024628404.1 | 97.8 | 180 | 4 | 0 | 1 | 180 | 1 | 180 | 7.10E-62 | 246.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76413.t1 | G7LDZ5 | 97.8 | 180 | 4 | 0 | 1 | 180 | 1 | 180 | 5.1e-62 | 246.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055455 | MS.gene76413 | 0.806943 | 6.44E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76413.t1 | MTR_8g077440 | 97.778 | 180 | 4 | 0 | 1 | 180 | 73 | 252 | 7.41e-126 | 354 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76413.t1 | AT3G51010 | 54.450 | 191 | 70 | 4 | 3 | 180 | 1 | 187 | 1.09e-61 | 189 |
Find 52 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCCCTTGATTAGGCTTAT+TGG | 0.196474 | 8.1:-30475179 | None:intergenic |
| CTCCCTTGATTAGGCTTATT+GGG | 0.266061 | 8.1:-30475178 | None:intergenic |
| CTCTTGATGCTCCCTTGATT+AGG | 0.327155 | 8.1:-30475187 | None:intergenic |
| GTCGTCCAGGGCCTTATGCT+TGG | 0.331141 | 8.1:+30475125 | MS.gene76413:intron |
| ATTAGGCTTATTGGGAAGTA+TGG | 0.347303 | 8.1:-30475170 | None:intergenic |
| TCTTCTTTGCAACCATCTTC+CGG | 0.379881 | 8.1:+30474905 | MS.gene76413:CDS |
| TCGTCCAGGGCCTTATGCTT+GGG | 0.393020 | 8.1:+30475126 | MS.gene76413:intron |
| CAAGCTAGCCCGCTTTCGAC+GGG | 0.400130 | 8.1:-30475020 | None:intergenic |
| TAAGAAGGTAGAGCGTAAAA+TGG | 0.403135 | 8.1:+30476424 | MS.gene76413:CDS |
| GGTGGTTTGCTGCCGGAAGA+TGG | 0.417214 | 8.1:-30474917 | None:intergenic |
| GCTAATATATACCAGTATAA+AGG | 0.421466 | 8.1:-30475245 | None:intergenic |
| GCTGTGAAAGTGGCTCAAAA+AGG | 0.426398 | 8.1:-30474954 | None:intergenic |
| TCAAGCTAGCCCGCTTTCGA+CGG | 0.435563 | 8.1:-30475021 | None:intergenic |
| TTATCAGAAGGTCGTCTCTT+GGG | 0.451983 | 8.1:-30474995 | None:intergenic |
| AAGAGAGTGGGCAGAAAGAC+TGG | 0.452985 | 8.1:+30476463 | MS.gene76413:CDS |
| GCTTGGGTTGAACACACAAC+TGG | 0.459757 | 8.1:+30475142 | MS.gene76413:CDS |
| CTTCCCAATAAGCCTAATCA+AGG | 0.465217 | 8.1:+30475175 | MS.gene76413:CDS |
| TGATAAACCCCGTCGAAAGC+GGG | 0.471130 | 8.1:+30475012 | MS.gene76413:CDS |
| GTGTGTTCAACCCAAGCATA+AGG | 0.483354 | 8.1:-30475136 | None:intergenic |
| GCAGCGCCGTGCCTTTATAC+TGG | 0.484793 | 8.1:+30475234 | MS.gene76413:CDS |
| TTTATCAGAAGGTCGTCTCT+TGG | 0.486620 | 8.1:-30474996 | None:intergenic |
| CGGGCTAGCTTGAGACCCTC+TGG | 0.489778 | 8.1:+30475031 | MS.gene76413:CDS |
| TTTCGACGGGGTTTATCAGA+AGG | 0.512993 | 8.1:-30475007 | None:intergenic |
| AGATTCGGAAGAGGAGTCCT+CGG | 0.513910 | 8.1:+30474800 | MS.gene76413:CDS |
| GCGGAAGAAGAACGTTAAGA+AGG | 0.519807 | 8.1:+30476409 | MS.gene76413:CDS |
| GAATTGGGGTGGTTTGCTGC+CGG | 0.523920 | 8.1:-30474924 | None:intergenic |
| TGATCTCACTCTCGTCGTCA+AGG | 0.527754 | 8.1:+30474840 | MS.gene76413:CDS |
| CTCACTCTCGTCGTCAAGGA+CGG | 0.532447 | 8.1:+30474844 | MS.gene76413:CDS |
| TGTAGGCGGAAAAGAAGAAA+AGG | 0.538675 | 8.1:+30476363 | MS.gene76413:intron |
| TGTCTGTCAAGCTGTGAAAG+TGG | 0.568033 | 8.1:-30474964 | None:intergenic |
| GTAAAATGGCTGCAGTTGCA+AGG | 0.569157 | 8.1:+30476438 | MS.gene76413:CDS |
| CTGATAAACCCCGTCGAAAG+CGG | 0.575794 | 8.1:+30475011 | MS.gene76413:CDS |
| TAAAATGGCTGCAGTTGCAA+GGG | 0.587269 | 8.1:+30476439 | MS.gene76413:CDS |
| GGTTGCAAAGAAGAATGAAA+CGG | 0.590402 | 8.1:-30474896 | None:intergenic |
| GATTCGGAAGAGGAGTCCTC+GGG | 0.593998 | 8.1:+30474801 | MS.gene76413:CDS |
| GGTTGAATTGCAGCGCCTTG+AGG | 0.594805 | 8.1:+30476484 | MS.gene76413:CDS |
| AGTTGCAAGGGAAAGAGAGT+GGG | 0.599831 | 8.1:+30476451 | MS.gene76413:CDS |
| CTCAGATGCAAGAGGCTAAG+CGG | 0.604543 | 8.1:+30476390 | MS.gene76413:CDS |
| CAGTTGCAAGGGAAAGAGAG+TGG | 0.605780 | 8.1:+30476450 | MS.gene76413:CDS |
| ACGACGAGAGTGAGATCAGA+GGG | 0.612151 | 8.1:-30474835 | None:intergenic |
| TTCCCAATAAGCCTAATCAA+GGG | 0.632102 | 8.1:+30475176 | MS.gene76413:CDS |
| CTAATCAAGGGAGCATCAAG+AGG | 0.644871 | 8.1:+30475188 | MS.gene76413:CDS |
| TATATACCAGTATAAAGGCA+CGG | 0.647751 | 8.1:-30475240 | None:intergenic |
| AAGGAAAGCTCAGATGCAAG+AGG | 0.649661 | 8.1:+30476382 | MS.gene76413:CDS |
| AAGCTAGCCCGCTTTCGACG+GGG | 0.650879 | 8.1:-30475019 | None:intergenic |
| AGAATGAAACGGCAATGTGG+AGG | 0.653637 | 8.1:-30474885 | None:intergenic |
| AAGGGAAGAAGGAATTGGGG+TGG | 0.654054 | 8.1:-30474935 | None:intergenic |
| ATCAAGGGAGCATCAAGAGG+AGG | 0.654645 | 8.1:+30475191 | MS.gene76413:CDS |
| GGAATGAGAAGAAACGCATG+AGG | 0.662356 | 8.1:+30475212 | MS.gene76413:CDS |
| AGAAGAATGAAACGGCAATG+TGG | 0.685252 | 8.1:-30474888 | None:intergenic |
| GACGACGAGAGTGAGATCAG+AGG | 0.687668 | 8.1:-30474836 | None:intergenic |
| GAGGGCGTAAAACATTCCCG+AGG | 0.745952 | 8.1:-30474817 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATAAAATGAAATTAAG+TGG | - | chr8.1:30475270-30475289 | None:intergenic | 10.0% |
| !!! | TTAATTTCATTTTATATATC+AGG | + | chr8.1:30475271-30475290 | MS.gene76413:intron | 10.0% |
| !!! | TTCATTTTTTTAAAAAGAAT+AGG | - | chr8.1:30476197-30476216 | None:intergenic | 10.0% |
| !! | AATATAATTGTATGTTCATT+GGG | + | chr8.1:30476328-30476347 | MS.gene76413:intron | 15.0% |
| !! | AATGAACATACAATTATATT+AGG | - | chr8.1:30476328-30476347 | None:intergenic | 15.0% |
| !! | TAATATAATTGTATGTTCAT+TGG | + | chr8.1:30476327-30476346 | MS.gene76413:intron | 15.0% |
| !! | TATTTAACATAAACTAATCT+TGG | + | chr8.1:30475549-30475568 | MS.gene76413:intron | 15.0% |
| !! | AAAAAATGAAAGTTTCTCTA+TGG | + | chr8.1:30476207-30476226 | MS.gene76413:intron | 20.0% |
| !! | AAAGTTCAAATTCTTCTATA+AGG | - | chr8.1:30476248-30476267 | None:intergenic | 20.0% |
| !! | TATGAGTTTCATTTAAATCT+TGG | - | chr8.1:30475818-30475837 | None:intergenic | 20.0% |
| !! | TTATAGAAGAATTTGAACTT+TGG | + | chr8.1:30476247-30476266 | MS.gene76413:intron | 20.0% |
| !!! | AATTCTTCTATAAGGAATTT+TGG | - | chr8.1:30476240-30476259 | None:intergenic | 20.0% |
| !!! | AATTTTCTATTGAATGTCAA+CGG | + | chr8.1:30475852-30475871 | MS.gene76413:intron | 20.0% |
| !!! | ACTTTCTTATTTCTATTTTG+TGG | - | chr8.1:30475909-30475928 | None:intergenic | 20.0% |
| !!! | TTTCTATTTTGTGGTTATTA+TGG | - | chr8.1:30475900-30475919 | None:intergenic | 20.0% |
| ! | ATACTTATGAACGATAGATA+AGG | + | chr8.1:30475667-30475686 | MS.gene76413:intron | 25.0% |
| ! | CTTTGTGAATATTGTTTACT+AGG | + | chr8.1:30475374-30475393 | MS.gene76413:intron | 25.0% |
| ! | GATACCTTAAACATACATAT+AGG | - | chr8.1:30475950-30475969 | None:intergenic | 25.0% |
| ! | GCTAATATATACCAGTATAA+AGG | - | chr8.1:30475248-30475267 | None:intergenic | 25.0% |
| ! | TTGACCTATATGTATGTTTA+AGG | + | chr8.1:30475943-30475962 | MS.gene76413:intron | 25.0% |
| !! | AATAGGACATGTATTTTGTT+AGG | - | chr8.1:30476180-30476199 | None:intergenic | 25.0% |
| !! | GTTATTCTAGCTATGTATTA+GGG | + | chr8.1:30476129-30476148 | MS.gene76413:intron | 25.0% |
| !! | TGTTATTCTAGCTATGTATT+AGG | + | chr8.1:30476128-30476147 | MS.gene76413:intron | 25.0% |
| !!! | CTTTTATTTTTGCTACAAGT+TGG | - | chr8.1:30475644-30475663 | None:intergenic | 25.0% |
| ATAACAGCAAAGAAAACATG+AGG | - | chr8.1:30475616-30475635 | None:intergenic | 30.0% | |
| ATGTTTATCCAAAGACCATT+TGG | - | chr8.1:30476284-30476303 | None:intergenic | 30.0% | |
| GATAAACATAACTGTGATCA+TGG | + | chr8.1:30476295-30476314 | MS.gene76413:intron | 30.0% | |
| GGTTATTATGGCTATAAGTA+TGG | - | chr8.1:30475888-30475907 | None:intergenic | 30.0% | |
| TATATACCAGTATAAAGGCA+CGG | - | chr8.1:30475243-30475262 | None:intergenic | 30.0% | |
| TGCATGGAGTATAAACTATA+AGG | + | chr8.1:30475410-30475429 | MS.gene76413:intron | 30.0% | |
| AAAAAGGGAAGAAGGAATTG+GGG | - | chr8.1:30474941-30474960 | None:intergenic | 35.0% | |
| AAATCTTGGACCATCTGTAT+TGG | - | chr8.1:30475804-30475823 | None:intergenic | 35.0% | |
| AACTATAAGGTGCATGAGTT+TGG | + | chr8.1:30475423-30475442 | MS.gene76413:intron | 35.0% | |
| AAGTGTCAACTAAAGCTAGA+AGG | + | chr8.1:30476030-30476049 | MS.gene76413:intron | 35.0% | |
| AATCTTGGACCATCTGTATT+GGG | - | chr8.1:30475803-30475822 | None:intergenic | 35.0% | |
| AGGAAACATATCATCTTGCA+TGG | + | chr8.1:30475394-30475413 | MS.gene76413:intron | 35.0% | |
| ATAAGAAAGTGACAACTGAG+AGG | + | chr8.1:30475919-30475938 | MS.gene76413:intron | 35.0% | |
| ATTAGGCTTATTGGGAAGTA+TGG | - | chr8.1:30475173-30475192 | None:intergenic | 35.0% | |
| CAAAAAGGGAAGAAGGAATT+GGG | - | chr8.1:30474942-30474961 | None:intergenic | 35.0% | |
| CATACTATCATACCAGTATG+TGG | + | chr8.1:30475969-30475988 | MS.gene76413:intron | 35.0% | |
| GACTCACACATGTAAATCAA+AGG | - | chr8.1:30475326-30475345 | None:intergenic | 35.0% | |
| GGAAGAGAAGAAAAAGTCTA+TGG | + | chr8.1:30476505-30476524 | MS.gene76413:CDS | 35.0% | |
| GGTTGCAAAGAAGAATGAAA+CGG | - | chr8.1:30474899-30474918 | None:intergenic | 35.0% | |
| TAAGAAGGTAGAGCGTAAAA+TGG | + | chr8.1:30476424-30476443 | MS.gene76413:CDS | 35.0% | |
| TATATCAGCCAAATGGTCTT+TGG | + | chr8.1:30476273-30476292 | MS.gene76413:intron | 35.0% | |
| TCAAAAAGGGAAGAAGGAAT+TGG | - | chr8.1:30474943-30474962 | None:intergenic | 35.0% | |
| TCTGTAACCATCATAAACAC+TGG | + | chr8.1:30475746-30475765 | MS.gene76413:intron | 35.0% | |
| TTCCCAATAAGCCTAATCAA+GGG | + | chr8.1:30475176-30475195 | MS.gene76413:CDS | 35.0% | |
| TTGGTTGTATATCAGCCAAA+TGG | + | chr8.1:30476266-30476285 | MS.gene76413:intron | 35.0% | |
| ! | ATTCTAGCTATGTATTAGGG+AGG | + | chr8.1:30476132-30476151 | MS.gene76413:intron | 35.0% |
| !! | ACTTTTTCTTCTCTTCCTCA+AGG | - | chr8.1:30476502-30476521 | None:intergenic | 35.0% |
| !! | AGAAGTACCAGTGTTTATGA+TGG | - | chr8.1:30475756-30475775 | None:intergenic | 35.0% |
| !! | TTTGGAACAAAGGTATTGTC+TGG | + | chr8.1:30475441-30475460 | MS.gene76413:intron | 35.0% |
| !!! | TTGGGAACTTTTTTGCATGT+AGG | + | chr8.1:30476346-30476365 | MS.gene76413:intron | 35.0% |
| ACAGCCAATTATTTGCCACA+GGG | - | chr8.1:30476009-30476028 | None:intergenic | 40.0% | |
| ACTCCATTACCCAATACAGA+TGG | + | chr8.1:30475791-30475810 | MS.gene76413:intron | 40.0% | |
| AGAAGAATGAAACGGCAATG+TGG | - | chr8.1:30474891-30474910 | None:intergenic | 40.0% | |
| CTCCCTTGATTAGGCTTATT+GGG | - | chr8.1:30475181-30475200 | None:intergenic | 40.0% | |
| CTGTGAAAGTGGCTCAAAAA+GGG | - | chr8.1:30474956-30474975 | None:intergenic | 40.0% | |
| CTTCCCAATAAGCCTAATCA+AGG | + | chr8.1:30475175-30475194 | MS.gene76413:CDS | 40.0% | |
| TAAAATGGCTGCAGTTGCAA+GGG | + | chr8.1:30476439-30476458 | MS.gene76413:CDS | 40.0% | |
| TATGATGAACTTGTCGTCCA+GGG | + | chr8.1:30475113-30475132 | MS.gene76413:intron | 40.0% | |
| TCTTCTTTGCAACCATCTTC+CGG | + | chr8.1:30474905-30474924 | MS.gene76413:CDS | 40.0% | |
| TGTAGGCGGAAAAGAAGAAA+AGG | + | chr8.1:30476363-30476382 | MS.gene76413:intron | 40.0% | |
| TTATCAGAAGGTCGTCTCTT+GGG | - | chr8.1:30474998-30475017 | None:intergenic | 40.0% | |
| TTATGATGAACTTGTCGTCC+AGG | + | chr8.1:30475112-30475131 | MS.gene76413:intron | 40.0% | |
| TTTATCAGAAGGTCGTCTCT+TGG | - | chr8.1:30474999-30475018 | None:intergenic | 40.0% | |
| !! | AACAAAGGTATTGTCTGGAG+TGG | + | chr8.1:30475446-30475465 | MS.gene76413:intron | 40.0% |
| !! | CACAGTGAAAGCATCTTTAG+AGG | + | chr8.1:30475703-30475722 | MS.gene76413:intron | 40.0% |
| !! | CTGTATTGGGTAATGGAGTT+AGG | - | chr8.1:30475790-30475809 | None:intergenic | 40.0% |
| !! | GGGTAATGGAGTTAGGTTTA+TGG | - | chr8.1:30475783-30475802 | None:intergenic | 40.0% |
| !! | GTTATGAGAGAGCATCAAGA+TGG | - | chr8.1:30475575-30475594 | None:intergenic | 40.0% |
| !!! | GGAACTTTTTTGCATGTAGG+CGG | + | chr8.1:30476349-30476368 | MS.gene76413:intron | 40.0% |
| AAGGAAAGCTCAGATGCAAG+AGG | + | chr8.1:30476382-30476401 | MS.gene76413:CDS | 45.0% | |
| AGAATGAAACGGCAATGTGG+AGG | - | chr8.1:30474888-30474907 | None:intergenic | 45.0% | |
| AGCAGCAGCTGACAGATAAA+TGG | - | chr8.1:30476108-30476127 | None:intergenic | 45.0% | |
| AGCCAATTATTTGCCACAGG+GGG | - | chr8.1:30476007-30476026 | None:intergenic | 45.0% | |
| AGTGGCTCAAAAAGGGAAGA+AGG | - | chr8.1:30474949-30474968 | None:intergenic | 45.0% | |
| AGTTGCAAGGGAAAGAGAGT+GGG | + | chr8.1:30476451-30476470 | MS.gene76413:CDS | 45.0% | |
| CAGCCAATTATTTGCCACAG+GGG | - | chr8.1:30476008-30476027 | None:intergenic | 45.0% | |
| CAGTAATACGGACCACATAC+TGG | - | chr8.1:30475984-30476003 | None:intergenic | 45.0% | |
| CTCTTGATGCTCCCTTGATT+AGG | - | chr8.1:30475190-30475209 | None:intergenic | 45.0% | |
| GACAGCCAATTATTTGCCAC+AGG | - | chr8.1:30476010-30476029 | None:intergenic | 45.0% | |
| GCGCTGAGGCTAAATTGATT+TGG | + | chr8.1:30476076-30476095 | MS.gene76413:intron | 45.0% | |
| GCGGAAGAAGAACGTTAAGA+AGG | + | chr8.1:30476409-30476428 | MS.gene76413:CDS | 45.0% | |
| GCTCCCTTGATTAGGCTTAT+TGG | - | chr8.1:30475182-30475201 | None:intergenic | 45.0% | |
| GCTGTGAAAGTGGCTCAAAA+AGG | - | chr8.1:30474957-30474976 | None:intergenic | 45.0% | |
| GGAATGAGAAGAAACGCATG+AGG | + | chr8.1:30475212-30475231 | MS.gene76413:CDS | 45.0% | |
| GGACCATCTGTATTGGGTAA+TGG | - | chr8.1:30475797-30475816 | None:intergenic | 45.0% | |
| GTAAAATGGCTGCAGTTGCA+AGG | + | chr8.1:30476438-30476457 | MS.gene76413:CDS | 45.0% | |
| GTGTGTTCAACCCAAGCATA+AGG | - | chr8.1:30475139-30475158 | None:intergenic | 45.0% | |
| TACAACTTCACAATGCGCTG+AGG | + | chr8.1:30476062-30476081 | MS.gene76413:intron | 45.0% | |
| TGTCTGTCAAGCTGTGAAAG+TGG | - | chr8.1:30474967-30474986 | None:intergenic | 45.0% | |
| TTTCGACGGGGTTTATCAGA+AGG | - | chr8.1:30475010-30475029 | None:intergenic | 45.0% | |
| ! | GGTGCATGAGTTTGGAACAA+AGG | + | chr8.1:30475431-30475450 | MS.gene76413:intron | 45.0% |
| !! | CTAATCAAGGGAGCATCAAG+AGG | + | chr8.1:30475188-30475207 | MS.gene76413:CDS | 45.0% |
| AAGAGAGTGGGCAGAAAGAC+TGG | + | chr8.1:30476463-30476482 | MS.gene76413:CDS | 50.0% | |
| AAGGGAAGAAGGAATTGGGG+TGG | - | chr8.1:30474938-30474957 | None:intergenic | 50.0% | |
| ACGACGAGAGTGAGATCAGA+GGG | - | chr8.1:30474838-30474857 | None:intergenic | 50.0% | |
| AGATTCGGAAGAGGAGTCCT+CGG | + | chr8.1:30474800-30474819 | MS.gene76413:CDS | 50.0% | |
| CAGTTGCAAGGGAAAGAGAG+TGG | + | chr8.1:30476450-30476469 | MS.gene76413:CDS | 50.0% | |
| CTCAGATGCAAGAGGCTAAG+CGG | + | chr8.1:30476390-30476409 | MS.gene76413:CDS | 50.0% | |
| CTGATAAACCCCGTCGAAAG+CGG | + | chr8.1:30475011-30475030 | MS.gene76413:CDS | 50.0% | |
| TGATAAACCCCGTCGAAAGC+GGG | + | chr8.1:30475012-30475031 | MS.gene76413:CDS | 50.0% | |
| TGATCTCACTCTCGTCGTCA+AGG | + | chr8.1:30474840-30474859 | MS.gene76413:CDS | 50.0% | |
| TGCCCCCTGTGGCAAATAAT+TGG | + | chr8.1:30476002-30476021 | MS.gene76413:intron | 50.0% | |
| !! | ATCAAGGGAGCATCAAGAGG+AGG | + | chr8.1:30475191-30475210 | MS.gene76413:CDS | 50.0% |
| !! | GCTTGGGTTGAACACACAAC+TGG | + | chr8.1:30475142-30475161 | MS.gene76413:CDS | 50.0% |
| AAGCAACGCAACGCACCAGA+GGG | - | chr8.1:30475049-30475068 | None:intergenic | 55.0% | |
| CTCACTCTCGTCGTCAAGGA+CGG | + | chr8.1:30474844-30474863 | MS.gene76413:CDS | 55.0% | |
| GACGACGAGAGTGAGATCAG+AGG | - | chr8.1:30474839-30474858 | None:intergenic | 55.0% | |
| GATTCGGAAGAGGAGTCCTC+GGG | + | chr8.1:30474801-30474820 | MS.gene76413:CDS | 55.0% | |
| GGTTGAATTGCAGCGCCTTG+AGG | + | chr8.1:30476484-30476503 | MS.gene76413:CDS | 55.0% | |
| TCAACCCAAGCATAAGGCCC+TGG | - | chr8.1:30475133-30475152 | None:intergenic | 55.0% | |
| TCAAGCTAGCCCGCTTTCGA+CGG | - | chr8.1:30475024-30475043 | None:intergenic | 55.0% | |
| TGCCACAGGGGGCAGTAATA+CGG | - | chr8.1:30475996-30476015 | None:intergenic | 55.0% | |
| ! | GAGGGCGTAAAACATTCCCG+AGG | - | chr8.1:30474820-30474839 | None:intergenic | 55.0% |
| ! | TCGTCCAGGGCCTTATGCTT+GGG | + | chr8.1:30475126-30475145 | MS.gene76413:intron | 55.0% |
| !! | GAATTGGGGTGGTTTGCTGC+CGG | - | chr8.1:30474927-30474946 | None:intergenic | 55.0% |
| AAGCTAGCCCGCTTTCGACG+GGG | - | chr8.1:30475022-30475041 | None:intergenic | 60.0% | |
| CAAGCTAGCCCGCTTTCGAC+GGG | - | chr8.1:30475023-30475042 | None:intergenic | 60.0% | |
| GAAGCAACGCAACGCACCAG+AGG | - | chr8.1:30475050-30475069 | None:intergenic | 60.0% | |
| GCAGCGCCGTGCCTTTATAC+TGG | + | chr8.1:30475234-30475253 | MS.gene76413:CDS | 60.0% | |
| GTCCGTATTACTGCCCCCTG+TGG | + | chr8.1:30475991-30476010 | MS.gene76413:intron | 60.0% | |
| ! | GTCGTCCAGGGCCTTATGCT+TGG | + | chr8.1:30475125-30475144 | MS.gene76413:intron | 60.0% |
| !! | GGTGGTTTGCTGCCGGAAGA+TGG | - | chr8.1:30474920-30474939 | None:intergenic | 60.0% |
| !! | CGGGCTAGCTTGAGACCCTC+TGG | + | chr8.1:30475031-30475050 | MS.gene76413:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 30474797 | 30476532 | 30474797 | ID=MS.gene76413 |
| chr8.1 | mRNA | 30474797 | 30476532 | 30474797 | ID=MS.gene76413.t1;Parent=MS.gene76413 |
| chr8.1 | exon | 30474797 | 30475052 | 30474797 | ID=MS.gene76413.t1.exon1;Parent=MS.gene76413.t1 |
| chr8.1 | CDS | 30474797 | 30475052 | 30474797 | ID=cds.MS.gene76413.t1;Parent=MS.gene76413.t1 |
| chr8.1 | exon | 30475134 | 30475255 | 30475134 | ID=MS.gene76413.t1.exon2;Parent=MS.gene76413.t1 |
| chr8.1 | CDS | 30475134 | 30475255 | 30475134 | ID=cds.MS.gene76413.t1;Parent=MS.gene76413.t1 |
| chr8.1 | exon | 30476368 | 30476532 | 30476368 | ID=MS.gene76413.t1.exon3;Parent=MS.gene76413.t1 |
| chr8.1 | CDS | 30476368 | 30476532 | 30476368 | ID=cds.MS.gene76413.t1;Parent=MS.gene76413.t1 |
| Gene Sequence |
| Protein sequence |
