AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene77717

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77717.t1 MTR_4g036030 83.380 355 19 3 1 324 1 346 0.0 600
MS.gene77717.t1 MTR_4g101680 53.600 375 103 10 1 322 1 357 3.43e-120 350
MS.gene77717.t1 MTR_5g012080 55.864 324 78 13 1 285 1 298 1.77e-108 320
MS.gene77717.t1 MTR_5g021710 52.997 317 85 6 5 285 6 294 2.68e-93 281
MS.gene77717.t1 MTR_8g076110 52.281 285 112 6 5 286 4 267 6.13e-93 279
MS.gene77717.t1 MTR_1g096430 77.241 145 33 0 1 145 1 145 4.72e-82 252
MS.gene77717.t1 MTR_8g024480 45.190 343 128 9 1 289 9 345 1.35e-81 254
MS.gene77717.t1 MTR_2g062730 75.540 139 33 1 7 144 10 148 3.98e-74 232
MS.gene77717.t1 MTR_4g035590 72.857 140 33 1 7 141 8 147 5.42e-73 229
MS.gene77717.t1 MTR_2g064090 62.016 129 48 1 7 135 6 133 2.54e-57 189
MS.gene77717.t1 MTR_2g078700 61.194 134 47 2 5 136 21 151 2.19e-56 187
MS.gene77717.t1 MTR_6g477900 58.647 133 54 1 7 139 6 137 2.21e-56 183
MS.gene77717.t1 MTR_4g108760 62.308 130 46 1 7 136 17 143 1.63e-55 184
MS.gene77717.t1 MTR_3g435150 63.077 130 45 1 7 136 16 142 2.37e-55 182
MS.gene77717.t1 MTR_3g064580 56.835 139 59 1 7 145 6 143 1.15e-54 189
MS.gene77717.t1 MTR_7g011130 62.992 127 44 1 10 136 22 145 8.94e-54 180
MS.gene77717.t1 MTR_6g012670 60.000 130 49 1 7 136 20 146 8.05e-53 176
MS.gene77717.t1 MTR_6g084430 60.000 130 49 1 7 136 5 131 1.10e-52 176
MS.gene77717.t1 MTR_3g070030 58.140 129 51 1 8 136 20 145 1.35e-52 177
MS.gene77717.t1 MTR_7g085260 57.463 134 50 2 7 136 17 147 1.36e-52 177
MS.gene77717.t1 MTR_1g008740 59.701 134 48 3 7 137 13 143 2.37e-52 176
MS.gene77717.t1 MTR_5g076850 54.167 144 65 1 7 150 6 148 2.47e-52 182
MS.gene77717.t1 MTR_1g008740 59.701 134 48 3 7 137 27 157 3.86e-52 176
MS.gene77717.t1 MTR_2g064470 56.429 140 55 3 5 144 9 142 1.17e-51 173
MS.gene77717.t1 MTR_7g011120 61.417 127 46 1 10 136 11 134 3.52e-51 172
MS.gene77717.t1 MTR_7g085220 54.286 140 52 2 5 135 6 142 4.08e-51 172
MS.gene77717.t1 MTR_3g116070 57.463 134 51 3 7 137 23 153 6.48e-51 172
MS.gene77717.t1 MTR_4g081870 57.252 131 53 1 5 135 7 134 3.59e-50 168
MS.gene77717.t1 MTR_1g069805 54.887 133 55 2 7 137 10 139 4.41e-50 168
MS.gene77717.t1 MTR_5g041940 56.589 129 53 1 7 135 3 128 6.49e-50 167
MS.gene77717.t1 MTR_5g014300 51.773 141 60 2 5 138 4 143 1.83e-49 168
MS.gene77717.t1 MTR_6g032770 53.788 132 56 2 7 136 18 146 6.77e-49 168
MS.gene77717.t1 MTR_3g096920 47.368 171 81 4 7 175 7 170 9.19e-49 166
MS.gene77717.t1 MTR_3g096920 56.589 129 52 2 7 135 7 131 1.09e-48 165
MS.gene77717.t1 MTR_4g089135 47.879 165 78 3 6 165 14 175 1.15e-48 166
MS.gene77717.t1 MTR_3g109340 55.639 133 54 2 7 137 22 151 1.23e-48 166
MS.gene77717.t1 MTR_3g109340 55.639 133 54 2 7 137 22 151 1.26e-48 166
MS.gene77717.t1 MTR_7g097090 54.074 135 57 2 5 137 8 139 1.50e-48 164
MS.gene77717.t1 MTR_4g098630 54.015 137 59 2 5 138 4 139 1.95e-48 165
MS.gene77717.t1 MTR_8g467490 52.143 140 60 3 9 144 16 152 2.70e-48 166
MS.gene77717.t1 MTR_5g069030 56.818 132 56 1 3 134 21 151 3.39e-48 171
MS.gene77717.t1 MTR_8g094580 55.814 129 53 2 7 135 7 131 4.26e-48 163
MS.gene77717.t1 MTR_6g011860 45.763 177 86 4 1 174 9 178 5.88e-48 166
MS.gene77717.t1 MTR_3g088110 55.385 130 54 2 6 135 6 131 1.75e-47 161
MS.gene77717.t1 MTR_5g040420 53.435 131 56 2 7 135 14 141 2.77e-47 164
MS.gene77717.t1 MTR_3g096140 46.875 160 78 3 9 162 9 167 5.36e-47 160
MS.gene77717.t1 MTR_2g080010 53.030 132 57 2 6 135 14 142 8.64e-47 161
MS.gene77717.t1 MTR_2g093810 56.818 132 48 3 8 135 15 141 8.96e-47 160
MS.gene77717.t1 MTR_3g093040 54.015 137 61 2 7 142 108 243 9.97e-47 160
MS.gene77717.t1 MTR_7g100990 53.788 132 56 2 6 135 10 138 1.52e-46 160
MS.gene77717.t1 MTR_2157s0010 54.545 132 54 2 7 135 8 136 3.01e-46 157
MS.gene77717.t1 MTR_1g090720 57.480 127 49 3 9 133 44 167 3.27e-46 163
MS.gene77717.t1 MTR_3g096140 46.875 160 78 3 9 162 9 167 4.03e-46 160
MS.gene77717.t1 MTR_7g005280 54.676 139 55 3 7 143 15 147 7.03e-46 156
MS.gene77717.t1 MTR_2g068920 52.555 137 58 3 7 138 20 154 7.47e-46 157
MS.gene77717.t1 MTR_1g097300 51.908 131 62 1 9 139 21 150 8.80e-46 163
MS.gene77717.t1 MTR_3g093050 53.788 132 60 1 3 134 18 148 1.07e-45 164
MS.gene77717.t1 MTR_3g093050 53.788 132 60 1 3 134 18 148 1.25e-45 164
MS.gene77717.t1 MTR_2g068880 52.555 137 58 3 7 138 21 155 1.61e-45 157
MS.gene77717.t1 MTR_2g079990 52.713 129 58 1 7 135 16 141 2.22e-45 158
MS.gene77717.t1 MTR_2g079990 52.713 129 58 1 7 135 16 141 4.14e-45 158
MS.gene77717.t1 MTR_5g090970 41.714 175 84 4 7 173 18 182 4.31e-45 156
MS.gene77717.t1 MTR_4g134460 46.939 147 74 2 7 152 54 197 1.42e-44 157
MS.gene77717.t1 MTR_8g059170 51.938 129 59 1 7 135 14 139 1.77e-44 155
MS.gene77717.t1 MTR_5g090970 41.714 175 83 4 7 173 18 181 7.93e-44 152
MS.gene77717.t1 MTR_2g086880 53.600 125 56 1 9 133 20 142 1.02e-43 158
MS.gene77717.t1 MTR_2g086880 53.600 125 56 1 9 133 20 142 1.09e-43 157
MS.gene77717.t1 MTR_0036s0150 52.273 132 61 2 9 139 7 137 1.97e-43 157
MS.gene77717.t1 MTR_8g063550 50.000 128 63 1 9 136 8 134 4.10e-43 151
MS.gene77717.t1 MTR_1g090723 53.125 128 58 2 9 135 10 136 6.63e-43 156
MS.gene77717.t1 MTR_1g090723 53.125 128 58 2 9 135 10 136 6.66e-43 156
MS.gene77717.t1 MTR_3g070040 53.968 126 52 1 11 136 12 131 6.74e-43 151
MS.gene77717.t1 MTR_1g090723 53.125 128 58 2 9 135 10 136 7.18e-43 156
MS.gene77717.t1 MTR_8g063550 50.000 128 63 1 9 136 8 134 1.01e-42 153
MS.gene77717.t1 MTR_8g063550 50.000 128 63 1 9 136 8 134 2.28e-42 152
MS.gene77717.t1 MTR_4g075980 50.769 130 58 2 9 135 17 143 7.11e-42 147
MS.gene77717.t1 MTR_8g093580 36.975 238 126 6 9 240 8 227 2.60e-41 150
MS.gene77717.t1 MTR_8g099750 50.000 136 61 2 2 135 9 139 2.79e-40 141
MS.gene77717.t1 MTR_3g098810 45.695 151 71 4 2 148 9 152 2.02e-38 134
MS.gene77717.t1 MTR_4g052620 34.420 276 141 11 8 271 6 253 3.46e-37 134
MS.gene77717.t1 MTR_3g098810 45.033 151 72 4 2 148 9 152 5.05e-37 133
MS.gene77717.t1 MTR_3g096140 43.151 146 76 3 23 162 2 146 1.29e-36 134
MS.gene77717.t1 MTR_8g023840 49.296 142 64 5 2 137 3 142 7.90e-36 134
MS.gene77717.t1 MTR_8g023860 47.518 141 69 4 3 140 8 146 1.90e-34 130
MS.gene77717.t1 MTR_2g086690 46.269 134 62 5 8 134 5 135 1.20e-33 124
MS.gene77717.t1 MTR_7g105170 40.580 138 77 4 7 139 4 141 5.50e-29 112
MS.gene77717.t1 MTR_4g094302 41.985 131 63 3 7 135 11 130 5.66e-29 109
MS.gene77717.t1 MTR_4g094302 41.985 131 63 3 7 135 11 130 2.52e-28 108
MS.gene77717.t1 MTR_8g023900 43.077 130 69 4 7 133 12 139 1.02e-26 109
MS.gene77717.t1 MTR_8g023900 44.882 127 65 4 10 133 196 320 3.69e-25 105
MS.gene77717.t1 MTR_8g094580 60.274 73 28 1 63 135 6 77 4.13e-26 103
MS.gene77717.t1 MTR_8g023930 42.308 130 70 4 7 133 24 151 2.02e-25 106
MS.gene77717.t1 MTR_8g023880 39.333 150 70 6 1 133 1 146 1.02e-24 101
MS.gene77717.t1 MTR_7g070140 44.554 101 51 3 52 148 5 104 1.39e-22 92.0
MS.gene77717.t1 MTR_8g093790 38.235 136 63 6 7 140 10 126 2.53e-16 76.3
MS.gene77717.t1 MTR_7g083330 30.303 132 87 4 7 137 18 145 6.94e-14 69.7
MS.gene77717.t1 MTR_7g083360 30.070 143 92 5 7 145 10 148 9.20e-14 68.2
MS.gene77717.t1 MTR_3g096400 31.818 132 77 5 7 135 7 128 7.59e-13 67.0
MS.gene77717.t1 MTR_7g083370 28.906 128 86 4 7 133 10 133 1.46e-11 62.0
MS.gene77717.t1 MTR_1g087190 53.333 45 20 1 9 52 7 51 6.51e-11 57.4
MS.gene77717.t1 MTR_7g070150 40.299 67 34 2 106 166 8 74 8.05e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77717.t1 AT1G12260 51.637 397 113 12 1 324 1 391 7.79e-116 340
MS.gene77717.t1 AT1G12260 53.846 351 122 12 1 324 1 338 1.53e-110 325
MS.gene77717.t1 AT1G62700 50.275 364 102 12 1 302 1 347 2.55e-103 308
MS.gene77717.t1 AT1G62700 50.275 364 102 12 1 302 1 347 2.55e-103 308
MS.gene77717.t1 AT4G36160 50.588 340 113 8 7 304 10 336 6.93e-99 296
MS.gene77717.t1 AT4G36160 50.588 340 113 8 7 304 10 336 6.93e-99 296
MS.gene77717.t1 AT4G36160 50.588 340 113 8 7 304 14 340 7.85e-99 296
MS.gene77717.t1 AT5G62380 49.688 320 133 8 1 297 1 315 9.84e-95 285
MS.gene77717.t1 AT5G62380 49.688 320 133 8 1 297 1 315 9.84e-95 285
MS.gene77717.t1 AT2G18060 50.450 333 100 11 7 299 9 316 1.97e-93 282
MS.gene77717.t1 AT2G18060 50.450 333 100 11 7 299 9 316 1.97e-93 282
MS.gene77717.t1 AT5G66300 50.680 294 118 11 7 286 12 292 1.66e-84 257
MS.gene77717.t1 AT2G46770 44.986 349 99 11 1 302 10 312 1.50e-80 249
MS.gene77717.t1 AT3G61910 45.183 301 131 5 1 290 5 282 8.32e-79 244
MS.gene77717.t1 AT1G71930 75.556 135 33 0 5 139 7 141 3.07e-76 237
MS.gene77717.t1 AT1G71930 75.556 135 33 0 5 139 7 141 3.07e-76 237
MS.gene77717.t1 AT1G32770 41.813 342 156 8 1 323 10 327 2.35e-75 236
MS.gene77717.t1 AT4G10350 72.857 140 36 1 7 146 9 146 2.08e-73 230
MS.gene77717.t1 AT1G33280 71.642 134 38 0 7 140 8 141 9.84e-71 222
MS.gene77717.t1 AT1G79580 74.815 135 33 1 7 140 17 151 4.20e-70 223
MS.gene77717.t1 AT1G79580 74.815 135 33 1 7 140 17 151 4.20e-70 223
MS.gene77717.t1 AT1G79580 74.815 135 33 1 7 140 17 151 4.20e-70 223
MS.gene77717.t1 AT1G79580 74.815 135 33 1 7 140 17 151 4.20e-70 223
MS.gene77717.t1 AT1G79580 74.815 135 33 1 7 140 17 151 4.20e-70 223
MS.gene77717.t1 AT3G17730 56.944 144 61 1 7 150 6 148 8.77e-58 187
MS.gene77717.t1 AT3G18400 58.696 138 54 1 6 143 4 138 2.30e-56 185
MS.gene77717.t1 AT5G61430 60.769 130 48 1 7 136 16 142 3.94e-55 183
MS.gene77717.t1 AT3G29035 60.769 130 48 1 7 136 24 150 9.80e-55 181
MS.gene77717.t1 AT1G65910 58.647 133 54 1 7 139 6 137 1.40e-54 188
MS.gene77717.t1 AT5G07680 60.000 130 49 1 7 136 3 129 3.96e-54 179
MS.gene77717.t1 AT5G39610 60.769 130 48 1 7 136 20 146 5.83e-54 178
MS.gene77717.t1 AT5G07680 60.000 130 49 1 7 136 17 143 5.87e-54 179
MS.gene77717.t1 AT5G46590 56.944 144 58 3 5 147 4 144 3.30e-53 176
MS.gene77717.t1 AT5G17260 57.143 133 56 1 7 139 6 137 3.58e-53 181
MS.gene77717.t1 AT5G46590 56.944 144 58 3 5 147 4 144 3.65e-53 176
MS.gene77717.t1 AT3G03200 57.895 133 55 1 7 139 6 137 5.26e-53 181
MS.gene77717.t1 AT1G76420 58.955 134 50 2 7 138 22 152 1.51e-52 176
MS.gene77717.t1 AT3G15170 60.448 134 48 2 5 136 18 148 1.70e-52 175
MS.gene77717.t1 AT2G24430 58.647 133 50 2 7 137 16 145 3.71e-52 174
MS.gene77717.t1 AT2G24430 58.647 133 50 2 7 137 16 145 3.71e-52 174
MS.gene77717.t1 AT5G53950 59.398 133 49 2 6 136 16 145 4.88e-52 176
MS.gene77717.t1 AT1G69490 54.225 142 62 1 5 146 7 145 5.83e-52 172
MS.gene77717.t1 AT3G12977 57.895 133 51 3 5 136 16 144 1.56e-51 172
MS.gene77717.t1 AT1G54330 60.465 129 50 1 7 135 6 133 3.23e-51 172
MS.gene77717.t1 AT5G18270 56.489 131 53 2 7 136 21 148 4.05e-51 172
MS.gene77717.t1 AT5G18270 56.489 131 53 2 7 136 21 148 4.91e-51 172
MS.gene77717.t1 AT3G10490 55.714 140 58 2 5 141 25 163 6.29e-51 169
MS.gene77717.t1 AT3G04060 57.252 131 52 2 7 136 20 147 6.56e-51 172
MS.gene77717.t1 AT3G10480 56.115 139 57 2 7 142 27 164 1.00e-50 174
MS.gene77717.t1 AT3G10480 56.115 139 57 2 7 142 27 164 1.09e-50 174
MS.gene77717.t1 AT4G35580 58.333 132 54 1 3 134 5 135 1.29e-50 175
MS.gene77717.t1 AT3G04070 56.618 136 51 2 5 135 8 140 1.60e-50 171
MS.gene77717.t1 AT4G35580 58.333 132 54 1 3 134 5 135 1.75e-50 176
MS.gene77717.t1 AT4G35580 58.333 132 54 1 3 134 5 135 1.78e-50 176
MS.gene77717.t1 AT3G04070 56.618 136 51 2 5 135 8 140 2.40e-50 171
MS.gene77717.t1 AT3G10490 57.353 136 54 2 9 141 29 163 5.96e-50 172
MS.gene77717.t1 AT4G17980 57.143 133 54 2 5 135 4 135 1.64e-49 166
MS.gene77717.t1 AT1G61110 55.882 136 55 3 6 140 15 146 1.88e-49 167
MS.gene77717.t1 AT1G56010 54.887 133 56 2 5 136 17 146 2.15e-49 167
MS.gene77717.t1 AT4G17980 57.143 133 54 2 5 135 4 135 3.31e-49 166
MS.gene77717.t1 AT1G33060 55.319 141 59 2 7 144 24 163 3.74e-49 174
MS.gene77717.t1 AT1G33060 55.319 141 59 2 7 144 24 163 3.87e-49 174
MS.gene77717.t1 AT5G63790 56.154 130 53 2 6 135 59 184 8.88e-49 166
MS.gene77717.t1 AT5G63790 56.154 130 53 2 6 135 49 174 9.26e-49 166
MS.gene77717.t1 AT5G08790 54.815 135 57 2 1 135 1 131 3.49e-48 163
MS.gene77717.t1 AT5G39820 52.632 133 58 2 7 137 20 149 1.04e-47 164
MS.gene77717.t1 AT1G01720 52.593 135 60 2 1 135 1 131 1.38e-47 162
MS.gene77717.t1 AT5G24590 54.930 142 61 3 3 142 9 149 1.86e-47 166
MS.gene77717.t1 AT2G43000 48.571 140 69 1 9 148 20 156 3.01e-47 160
MS.gene77717.t1 AT4G27410 54.264 129 56 1 7 135 14 139 3.75e-47 161
MS.gene77717.t1 AT1G77450 54.615 130 55 2 6 135 9 134 4.49e-47 159
MS.gene77717.t1 AT3G10500 50.685 146 68 2 2 144 4 148 7.10e-47 166
MS.gene77717.t1 AT5G04410 49.669 151 70 3 2 148 4 152 7.71e-47 166
MS.gene77717.t1 AT4G10350 75.789 95 21 1 52 146 7 99 2.83e-46 159
MS.gene77717.t1 AT3G49530 50.000 146 71 2 7 151 13 157 3.57e-46 161
MS.gene77717.t1 AT3G49530 50.000 146 71 2 7 151 13 157 6.40e-46 162
MS.gene77717.t1 AT2G33480 53.077 130 55 1 6 135 14 137 7.18e-46 157
MS.gene77717.t1 AT2G33480 53.077 130 55 1 6 135 14 137 9.67e-46 156
MS.gene77717.t1 AT1G26870 53.125 128 55 2 9 134 18 142 9.83e-46 160
MS.gene77717.t1 AT1G34180 48.872 133 67 1 9 141 18 149 1.16e-45 161
MS.gene77717.t1 AT4G27410 50.350 143 57 2 7 135 14 156 2.31e-45 157
MS.gene77717.t1 AT3G10480 45.977 174 57 4 5 142 25 197 2.37e-45 162
MS.gene77717.t1 AT1G32510 50.725 138 60 2 5 135 4 140 2.62e-45 155
MS.gene77717.t1 AT1G34180 48.872 133 67 1 9 141 18 149 2.90e-45 162
MS.gene77717.t1 AT2G02450 46.053 152 78 2 7 157 51 199 3.66e-45 158
MS.gene77717.t1 AT2G02450 46.053 152 78 2 7 157 51 199 4.55e-45 159
MS.gene77717.t1 AT2G27300 47.857 140 67 2 5 144 12 145 1.48e-44 155
MS.gene77717.t1 AT3G15500 51.938 129 59 1 7 135 14 139 4.90e-44 153
MS.gene77717.t1 AT1G34190 49.624 133 66 1 9 141 18 149 8.35e-44 158
MS.gene77717.t1 AT4G28530 48.026 152 56 4 5 137 8 155 8.46e-44 154
MS.gene77717.t1 AT1G52890 51.938 129 59 1 7 135 14 139 1.35e-43 152
MS.gene77717.t1 AT3G15510 53.543 127 54 2 11 135 21 144 3.91e-43 152
MS.gene77717.t1 AT5G13180 50.735 136 59 3 2 135 9 138 7.68e-43 148
MS.gene77717.t1 AT1G34180 44.444 144 69 1 9 141 18 161 8.73e-43 153
MS.gene77717.t1 AT1G34180 44.444 144 69 1 9 141 18 161 1.87e-42 154
MS.gene77717.t1 AT2G17040 48.462 130 61 2 9 135 8 134 6.26e-42 147
MS.gene77717.t1 AT5G04395 46.053 152 69 3 5 143 26 177 8.88e-42 144
MS.gene77717.t1 AT5G22290 48.062 129 65 1 5 133 19 145 1.74e-41 147
MS.gene77717.t1 AT1G52880 55.039 129 51 2 11 135 21 146 4.14e-41 146
MS.gene77717.t1 AT5G64060 46.212 132 70 1 5 136 4 134 4.68e-41 147
MS.gene77717.t1 AT5G09330 46.212 132 70 1 5 136 4 134 6.33e-41 149
MS.gene77717.t1 AT5G09330 46.212 132 70 1 5 136 4 134 6.33e-41 149
MS.gene77717.t1 AT5G09330 46.212 132 70 1 5 136 4 134 6.33e-41 149
MS.gene77717.t1 AT5G09330 46.212 132 70 1 5 136 4 134 6.33e-41 149
MS.gene77717.t1 AT5G09330 46.212 132 70 1 5 136 4 134 6.33e-41 149
MS.gene77717.t1 AT3G44290 45.600 125 66 1 9 133 16 138 6.38e-40 140
MS.gene77717.t1 AT3G44290 45.600 125 66 1 9 133 16 138 3.82e-39 141
MS.gene77717.t1 AT3G12910 48.227 141 62 4 9 143 23 158 1.72e-38 139
MS.gene77717.t1 AT1G32870 48.120 133 66 2 7 139 10 139 2.90e-36 137
MS.gene77717.t1 AT1G32870 48.120 133 66 2 7 139 10 139 3.09e-36 137
MS.gene77717.t1 AT1G32870 48.120 133 66 2 7 139 46 175 4.21e-36 137
MS.gene77717.t1 AT5G61430 70.270 74 22 0 63 136 6 79 5.83e-35 128
MS.gene77717.t1 AT3G12977 61.176 85 30 1 52 136 10 91 6.27e-34 124
MS.gene77717.t1 AT2G18060 39.331 239 84 10 88 286 2 219 1.17e-33 125
MS.gene77717.t1 AT1G56010 66.667 72 24 0 65 136 8 79 2.13e-32 121
MS.gene77717.t1 AT5G22380 44.275 131 63 5 10 133 8 135 1.07e-29 113
MS.gene77717.t1 AT3G44350 41.221 131 68 5 10 134 8 135 6.69e-27 103
MS.gene77717.t1 AT3G44350 41.221 131 68 5 10 134 8 135 8.14e-27 106
MS.gene77717.t1 AT2G33480 55.128 78 35 0 58 135 3 80 9.62e-27 105
MS.gene77717.t1 AT1G02230 46.565 131 61 6 8 133 4 130 2.77e-26 107
MS.gene77717.t1 AT4G28530 41.045 134 56 4 5 119 8 137 3.85e-26 106
MS.gene77717.t1 AT4G01520 38.346 133 76 4 8 135 5 136 1.19e-25 104
MS.gene77717.t1 AT1G02250 46.565 131 61 5 8 133 4 130 1.21e-25 105
MS.gene77717.t1 AT3G04420 42.636 129 69 3 8 133 4 130 2.22e-25 103
MS.gene77717.t1 AT5G64530 41.221 131 60 4 7 135 3 118 5.57e-25 99.0
MS.gene77717.t1 AT3G04420 42.636 129 69 3 8 133 4 130 6.86e-25 103
MS.gene77717.t1 AT5G64530 41.221 131 60 4 7 135 3 118 1.90e-24 98.6
MS.gene77717.t1 AT4G01540 38.168 131 75 4 10 135 7 136 1.96e-24 102
MS.gene77717.t1 AT4G01540 38.168 131 75 4 10 135 7 136 2.13e-24 102
MS.gene77717.t1 AT4G01540 38.168 131 75 4 10 135 7 136 2.35e-24 102
MS.gene77717.t1 AT4G01540 38.168 131 75 4 10 135 7 136 2.64e-24 103
MS.gene77717.t1 AT4G01550 38.462 130 75 3 10 135 7 135 6.98e-24 101
MS.gene77717.t1 AT1G02220 41.085 129 70 4 7 133 3 127 9.32e-21 92.4
MS.gene77717.t1 AT1G01010 36.296 135 71 5 10 133 6 136 5.56e-19 87.4
MS.gene77717.t1 AT5G50820 37.410 139 62 6 6 135 16 138 1.94e-18 82.4
MS.gene77717.t1 AT2G43000 50.000 66 33 0 72 137 2 67 4.54e-18 81.3
MS.gene77717.t1 AT3G10490 58.065 62 23 1 83 141 2 63 5.46e-18 84.0
MS.gene77717.t1 AT3G10490 58.065 62 23 1 83 141 2 63 5.46e-18 84.0
MS.gene77717.t1 AT3G56530 30.370 135 90 2 8 140 53 185 1.29e-16 79.7
MS.gene77717.t1 AT5G14000 29.771 131 85 2 7 135 15 140 3.20e-14 69.7
MS.gene77717.t1 AT3G55210 30.070 143 85 4 7 136 11 151 1.00e-13 70.9
MS.gene77717.t1 AT5G22290 55.556 45 20 0 89 133 2 46 2.56e-13 68.9
MS.gene77717.t1 AT5G14000 29.197 137 90 2 1 135 9 140 2.74e-13 68.2
MS.gene77717.t1 AT3G04430 35.075 134 70 6 13 133 6 135 1.80e-11 62.8
MS.gene77717.t1 AT1G28470 27.439 164 94 6 7 150 77 235 6.48e-11 62.8

Find 57 sgRNAs with CRISPR-Local

Find 151 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGATACTTCTTATCTTTA+TGG 0.078281 4.4:+68184524 None:intergenic
CAATATTGAATTCAGAAATT+TGG 0.171673 4.4:-68182834 MS.gene77717:CDS
GAGCAACTGCAGCTGGATTT+TGG 0.212597 4.4:-68184483 MS.gene77717:CDS
TGTTGTAACCATTGGATTAG+AGG 0.295684 4.4:+68183096 None:intergenic
TAATTGTTGGTATATCAAAT+TGG 0.305571 4.4:+68183240 None:intergenic
AATTGTCACGAGACATGTTT+TGG 0.317098 4.4:+68183176 None:intergenic
AATAATAACAACATCTTTCA+TGG 0.344913 4.4:-68182857 MS.gene77717:CDS
GAAGAAGATTGAACAAGCTT+TGG 0.352286 4.4:+68183127 None:intergenic
AGTTTCATTCATGCAAGATA+TGG 0.353877 4.4:-68183287 MS.gene77717:CDS
TTTATAGAGATTTGCAGAAT+AGG 0.359693 4.4:-68184580 MS.gene77717:intron
TATAGTAAGCATAATTTGAT+AGG 0.379805 4.4:-68184433 MS.gene77717:CDS
AAAGATAAGAAGTATCCAAC+TGG 0.410251 4.4:-68184520 MS.gene77717:CDS
CTATTTGTTCTTGTCCCAGT+TGG 0.412869 4.4:+68184505 None:intergenic
AGGCTTGAAACAGATGAAAA+TGG 0.413374 4.4:-68184334 MS.gene77717:CDS
CAAAACTTTCATGCTATGTA+TGG 0.416700 4.4:-68182989 MS.gene77717:CDS
CAAACACAAGTTGGATATGA+TGG 0.442162 4.4:-68182772 None:intergenic
TCAAATTGGATTGAGAGGTT+TGG 0.444509 4.4:+68183254 None:intergenic
GTGTCATATGTTGTAACCAT+TGG 0.449797 4.4:+68183088 None:intergenic
ACAAATAGAGCAACTGCAGC+TGG 0.455592 4.4:-68184490 MS.gene77717:CDS
GGAAGAAAATTGATTCAAGA+AGG 0.463332 4.4:-68185051 MS.gene77717:CDS
CCTCTACATCAAACACAAGT+TGG 0.475978 4.4:-68182781 MS.gene77717:CDS
TTCCAATGTTGAACAAGGTA+TGG 0.483739 4.4:-68182960 MS.gene77717:CDS
CCAACTTGTGTTTGATGTAG+AGG 0.486977 4.4:+68182781 None:intergenic
TTGGATTGAGAGGTTTGGTT+TGG 0.487041 4.4:+68183259 None:intergenic
ATTGGATAATGCATGAGTAT+AGG 0.487765 4.4:-68184354 MS.gene77717:CDS
CCTTTACAAAATTGAACCAT+GGG 0.489236 4.4:-68184999 MS.gene77717:CDS
AACCATACCTTGTTCAACAT+TGG 0.489325 4.4:+68182958 None:intergenic
CCAATGGACAAAAGTCAGAT+TGG 0.499786 4.4:-68184372 MS.gene77717:CDS
ATTGAACCATGGGATCTTGA+AGG 0.503378 4.4:-68184989 MS.gene77717:intron
TTGATGATCAAGTTACTGAT+TGG 0.505048 4.4:-68182937 MS.gene77717:CDS
AACTTGTGGATTACTACCTT+AGG 0.520831 4.4:-68185072 MS.gene77717:CDS
GATAGGAATGAGGAAAACAT+TGG 0.522127 4.4:-68184416 MS.gene77717:CDS
AAATTTGGAGAAACAAGAAA+TGG 0.525812 4.4:-68182819 MS.gene77717:CDS
AAGAATATGATGGTAATTGT+TGG 0.533908 4.4:+68183227 None:intergenic
TGGGATGGAACCTAAACCCC+GGG 0.538292 4.4:+68185104 None:intergenic
TCCCACAGATGAGGAACTTG+TGG 0.541887 4.4:-68185086 MS.gene77717:CDS
GTATATCAAATTGGATTGAG+AGG 0.548657 4.4:+68183249 None:intergenic
ATCCACAAGTTCCTCATCTG+TGG 0.551212 4.4:+68185084 None:intergenic
ACCTTTACAAAATTGAACCA+TGG 0.552414 4.4:-68185000 MS.gene77717:CDS
AGCATAATTTGATAGGAATG+AGG 0.556802 4.4:-68184426 MS.gene77717:CDS
GAAGAACAAGTTATACAAAG+TGG 0.557940 4.4:-68183019 MS.gene77717:CDS
CTTATACCTTCAAGATCCCA+TGG 0.563913 4.4:+68184983 None:intergenic
AAACATAACCTCTAATCCAA+TGG 0.567146 4.4:-68183104 MS.gene77717:CDS
TCTTGTAAGAGCATTGATGA+AGG 0.569946 4.4:+68183040 None:intergenic
AGCTTTGGACTCTCTAGAAG+TGG 0.581594 4.4:+68183142 None:intergenic
CAAGTTCCTCATCTGTGGGA+TGG 0.581878 4.4:+68185089 None:intergenic
TCCACAAGTTCCTCATCTGT+GGG 0.587470 4.4:+68185085 None:intergenic
AGATGAAAATGGCACACCAC+AGG 0.593474 4.4:-68184323 MS.gene77717:CDS
TAGGTTCCATCCCACAGATG+AGG 0.602397 4.4:-68185095 MS.gene77717:CDS
TATAAAGGTCGAGCTCCCAA+TGG 0.627931 4.4:-68184388 MS.gene77717:CDS
AACAATTCCAATGTTGAACA+AGG 0.643045 4.4:-68182965 MS.gene77717:CDS
GTGGGATGGAACCTAAACCC+CGG 0.647443 4.4:+68185103 None:intergenic
GAAAGCAACAGGAAGAGACA+AGG 0.657167 4.4:-68184461 MS.gene77717:CDS
GAACCGAAGAACAAAATGAG+TGG 0.672469 4.4:-68184558 MS.gene77717:CDS
AAGATAAGAAGTATCCAACT+GGG 0.681306 4.4:-68184519 MS.gene77717:CDS
GGATGGAACCTAAACCCCGG+GGG 0.731147 4.4:+68185106 None:intergenic
GGGATGGAACCTAAACCCCG+GGG 0.785968 4.4:+68185105 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAAAAAAGAAAAATAAAAA+AGG + chr4.4:68183301-68183320 None:intergenic 10.0%
!! TCTAAATATATGTTTATAAG+TGG + chr4.4:68184030-68184049 None:intergenic 15.0%
!! AAAATAATTTGATACTGAAG+CGG + chr4.4:68183163-68183182 None:intergenic 20.0%
!! AATAATAACAACATCTTTCA+TGG - chr4.4:68185045-68185064 MS.gene77717:CDS 20.0%
!! CAATATTGAATTCAGAAATT+TGG - chr4.4:68185068-68185087 MS.gene77717:CDS 20.0%
!! TAATTGTTGGTATATCAAAT+TGG + chr4.4:68184665-68184684 None:intergenic 20.0%
!! TATAGTAAGCATAATTTGAT+AGG - chr4.4:68183469-68183488 MS.gene77717:intron 20.0%
!! TCTCTAGATTTATTTAATGT+TGG - chr4.4:68183623-68183642 MS.gene77717:intron 20.0%
!! TTTGGATTAATATCAAAGTT+TGG + chr4.4:68182995-68183014 None:intergenic 20.0%
!!! AAAACATTGGTGTTTTATAA+AGG - chr4.4:68183499-68183518 MS.gene77717:intron 20.0%
!!! AAATAGTGAACTTTTTTTGT+GGG + chr4.4:68183135-68183154 None:intergenic 20.0%
!!! ATGTTATAGATTAGTTTGTA+CGG - chr4.4:68184307-68184326 MS.gene77717:intron 20.0%
!!! GTAATTCTCATTTTACAAAT+CGG + chr4.4:68184004-68184023 None:intergenic 20.0%
!!! TAAATAGTGAACTTTTTTTG+TGG + chr4.4:68183136-68183155 None:intergenic 20.0%
!!! TTATTTTTCAGTTTCTTAGT+AGG - chr4.4:68183176-68183195 MS.gene77717:CDS 20.0%
!!! TTTGTTTTTGTTATTTTCGA+CGG - chr4.4:68184484-68184503 MS.gene77717:CDS 20.0%
! AAATTTGGAGAAACAAGAAA+TGG - chr4.4:68185083-68185102 MS.gene77717:CDS 25.0%
! AAGAATATGATGGTAATTGT+TGG + chr4.4:68184678-68184697 None:intergenic 25.0%
! AGTTGAAATCGTAATTTCTA+TGG - chr4.4:68184124-68184143 MS.gene77717:intron 25.0%
! ATCGACAACAATAACAATTA+GGG + chr4.4:68184233-68184252 None:intergenic 25.0%
! CATATACACAACAAAATATG+AGG - chr4.4:68184151-68184170 MS.gene77717:intron 25.0%
! GCAATAGATAAGTCTAATAT+TGG + chr4.4:68184064-68184083 None:intergenic 25.0%
! TTGGATACTTCTTATCTTTA+TGG + chr4.4:68183381-68183400 None:intergenic 25.0%
! TTTATAGAGATTTGCAGAAT+AGG - chr4.4:68183322-68183341 MS.gene77717:intron 25.0%
!! AACAATAACAATTAGGGTTT+TGG + chr4.4:68184227-68184246 None:intergenic 25.0%
!! TTGAATCAATTTTCTTCCTA+AGG + chr4.4:68182849-68182868 None:intergenic 25.0%
!!! TAACAAATGTTAGTCTTCTA+AGG + chr4.4:68184423-68184442 None:intergenic 25.0%
!!! TCTTTTTTGCAAGAATATGA+TGG + chr4.4:68184688-68184707 None:intergenic 25.0%
!!! TGTTATAGATTAGTTTGTAC+GGG - chr4.4:68184308-68184327 MS.gene77717:intron 25.0%
!!! TTTACAAATCGGTTTTGTAA+TGG + chr4.4:68183993-68184012 None:intergenic 25.0%
AAACATAACCTCTAATCCAA+TGG - chr4.4:68184798-68184817 MS.gene77717:intron 30.0%
AACAATTCCAATGTTGAACA+AGG - chr4.4:68184937-68184956 MS.gene77717:intron 30.0%
ACAAATATCATCTTCGTGTT+TGG - chr4.4:68183951-68183970 MS.gene77717:intron 30.0%
ACATTACGTAATATATGCAG+GGG - chr4.4:68183070-68183089 MS.gene77717:CDS 30.0%
ACCTTTACAAAATTGAACCA+TGG - chr4.4:68182902-68182921 MS.gene77717:CDS 30.0%
AGCATAATTTGATAGGAATG+AGG - chr4.4:68183476-68183495 MS.gene77717:intron 30.0%
AGTTTCATTCATGCAAGATA+TGG - chr4.4:68184615-68184634 MS.gene77717:intron 30.0%
ATTGGATAATGCATGAGTAT+AGG - chr4.4:68183548-68183567 MS.gene77717:intron 30.0%
CAAAACTTTCATGCTATGTA+TGG - chr4.4:68184913-68184932 MS.gene77717:intron 30.0%
CCTTTACAAAATTGAACCAT+GGG - chr4.4:68182903-68182922 MS.gene77717:CDS 30.0%
GAAGAACAAGTTATACAAAG+TGG - chr4.4:68184883-68184902 MS.gene77717:intron 30.0%
GACATTACGTAATATATGCA+GGG - chr4.4:68183069-68183088 MS.gene77717:CDS 30.0%
GATAAAGTTGTGTTAACTCT+TGG - chr4.4:68184265-68184284 MS.gene77717:intron 30.0%
GATCGACAACAATAACAATT+AGG + chr4.4:68184234-68184253 None:intergenic 30.0%
GATTGTATTTATGTGCAGTT+TGG + chr4.4:68183013-68183032 None:intergenic 30.0%
GTATATCAAATTGGATTGAG+AGG + chr4.4:68184656-68184675 None:intergenic 30.0%
GTGTTTATCCAACATTCATT+GGG + chr4.4:68183933-68183952 None:intergenic 30.0%
TGTGTTTATCCAACATTCAT+TGG + chr4.4:68183934-68183953 None:intergenic 30.0%
! ATACCACTCATTTTGTTCTT+CGG + chr4.4:68183350-68183369 None:intergenic 30.0%
! GGAAGAAAATTGATTCAAGA+AGG - chr4.4:68182851-68182870 MS.gene77717:CDS 30.0%
! TATCAAAGTTTGGAGCATAA+TGG + chr4.4:68182985-68183004 None:intergenic 30.0%
! TTGATGATCAAGTTACTGAT+TGG - chr4.4:68184965-68184984 MS.gene77717:intron 30.0%
!! AAAGATAAGAAGTATCCAAC+TGG - chr4.4:68183382-68183401 MS.gene77717:intron 30.0%
!! AAGATAAGAAGTATCCAACT+GGG - chr4.4:68183383-68183402 MS.gene77717:intron 30.0%
!! AGACATTGAGAGTATTAAGA+AGG + chr4.4:68184378-68184397 None:intergenic 30.0%
!!! TTTTGTTATTTTCGACGGTT+TGG - chr4.4:68184489-68184508 MS.gene77717:CDS 30.0%
AACCATACCTTGTTCAACAT+TGG + chr4.4:68184947-68184966 None:intergenic 35.0%
ACTTGATCTTCATACCAACA+AGG + chr4.4:68184598-68184617 None:intergenic 35.0%
AGGCTTGAAACAGATGAAAA+TGG - chr4.4:68183568-68183587 MS.gene77717:intron 35.0%
ATGAGGCAAAATAAACCTAG+AGG - chr4.4:68184168-68184187 MS.gene77717:intron 35.0%
GAAGAAGATTGAACAAGCTT+TGG + chr4.4:68184778-68184797 None:intergenic 35.0%
GATAGGAATGAGGAAAACAT+TGG - chr4.4:68183486-68183505 MS.gene77717:intron 35.0%
GGACATTACGTAATATATGC+AGG - chr4.4:68183068-68183087 MS.gene77717:CDS 35.0%
GTGTCATATGTTGTAACCAT+TGG + chr4.4:68184817-68184836 None:intergenic 35.0%
TCAAATTGGATTGAGAGGTT+TGG + chr4.4:68184651-68184670 None:intergenic 35.0%
TGTGGGACTACAATATAAGT+GGG + chr4.4:68183118-68183137 None:intergenic 35.0%
TTCCAATGTTGAACAAGGTA+TGG - chr4.4:68184942-68184961 MS.gene77717:intron 35.0%
TTGTGGGACTACAATATAAG+TGG + chr4.4:68183119-68183138 None:intergenic 35.0%
! AACTTGTGGATTACTACCTT+AGG - chr4.4:68182830-68182849 MS.gene77717:CDS 35.0%
! AAGAGTTTCGCCAAAAGTAT+CGG - chr4.4:68183710-68183729 MS.gene77717:intron 35.0%
! AATTGTCACGAGACATGTTT+TGG + chr4.4:68184729-68184748 None:intergenic 35.0%
! ACCTTACAAGTTCACCTTTT+AGG + chr4.4:68183767-68183786 None:intergenic 35.0%
! CAATCTGACTTTTGTCCATT+GGG + chr4.4:68183532-68183551 None:intergenic 35.0%
! CCCATGGTTCAATTTTGTAA+AGG + chr4.4:68182906-68182925 None:intergenic 35.0%
! CCTTACAAGTTCACCTTTTA+GGG + chr4.4:68183766-68183785 None:intergenic 35.0%
! CTTACAAGTTCACCTTTTAG+GGG + chr4.4:68183765-68183784 None:intergenic 35.0%
! TGGTTTCAAACCGATACTTT+TGG + chr4.4:68183723-68183742 None:intergenic 35.0%
! TGTTGTAACCATTGGATTAG+AGG + chr4.4:68184809-68184828 None:intergenic 35.0%
!! TCTTGTAAGAGCATTGATGA+AGG + chr4.4:68184865-68184884 None:intergenic 35.0%
AAGAGTGACCCAATGAATGT+TGG - chr4.4:68183922-68183941 MS.gene77717:intron 40.0%
ATTGAACCATGGGATCTTGA+AGG - chr4.4:68182913-68182932 MS.gene77717:CDS 40.0%
CCAACTTGTGTTTGATGTAG+AGG + chr4.4:68185124-68185143 None:intergenic 40.0%
CCAATGGACAAAAGTCAGAT+TGG - chr4.4:68183530-68183549 MS.gene77717:intron 40.0%
CCCTAAAAGGTGAACTTGTA+AGG - chr4.4:68183763-68183782 MS.gene77717:intron 40.0%
CCTCTACATCAAACACAAGT+TGG - chr4.4:68185121-68185140 MS.gene77717:CDS 40.0%
CTATTTGTTCTTGTCCCAGT+TGG + chr4.4:68183400-68183419 None:intergenic 40.0%
CTTATACCTTCAAGATCCCA+TGG + chr4.4:68182922-68182941 None:intergenic 40.0%
GAACCGAAGAACAAAATGAG+TGG - chr4.4:68183344-68183363 MS.gene77717:intron 40.0%
GAGCATAATGGCAACAACAA+CGG + chr4.4:68182973-68182992 None:intergenic 40.0%
GGAAAAAGTTCCAAGACTCT+TGG + chr4.4:68184206-68184225 None:intergenic 40.0%
TAAGGCGTAGTACAATGGTA+TGG + chr4.4:68184405-68184424 None:intergenic 40.0%
TCTCATGTGTGTAGCTCATT+TGG - chr4.4:68183042-68183061 MS.gene77717:CDS 40.0%
! CCAATCTGACTTTTGTCCAT+TGG + chr4.4:68183533-68183552 None:intergenic 40.0%
! TTGGATTGAGAGGTTTGGTT+TGG + chr4.4:68184646-68184665 None:intergenic 40.0%
!! AAGTTCACCTTTTAGGGGTT+GGG + chr4.4:68183760-68183779 None:intergenic 40.0%
!! ACAATATAAGTGGGTTGTCC+AGG + chr4.4:68183109-68183128 None:intergenic 40.0%
!! CAATATAAGTGGGTTGTCCA+GGG + chr4.4:68183108-68183127 None:intergenic 40.0%
!! TCTTCTAAGGCGTAGTACAA+TGG + chr4.4:68184410-68184429 None:intergenic 40.0%
!!! AGTTTTGAATCACTTGCCTG+TGG + chr4.4:68183598-68183617 None:intergenic 40.0%
!!! CACGAGACATGTTTTGGAAT+GGG + chr4.4:68184723-68184742 None:intergenic 40.0%
!!! GATGTAGAGGCATTTTCATG+AGG + chr4.4:68185111-68185130 None:intergenic 40.0%
!!! TACTTTTTCTCATGTTCCCC+CGG - chr4.4:68182780-68182799 MS.gene77717:CDS 40.0%
!!! TCACGAGACATGTTTTGGAA+TGG + chr4.4:68184724-68184743 None:intergenic 40.0%
AAGTTCCAAGACTCTTGGCT+TGG + chr4.4:68184201-68184220 None:intergenic 45.0%
ACAAATAGAGCAACTGCAGC+TGG - chr4.4:68183412-68183431 MS.gene77717:intron 45.0%
AGATGAAAATGGCACACCAC+AGG - chr4.4:68183579-68183598 MS.gene77717:intron 45.0%
ATCCACAAGTTCCTCATCTG+TGG + chr4.4:68182821-68182840 None:intergenic 45.0%
CATTCCAAACGTCCAACCTT+AGG + chr4.4:68183869-68183888 None:intergenic 45.0%
GAAAGCAACAGGAAGAGACA+AGG - chr4.4:68183441-68183460 MS.gene77717:intron 45.0%
TATAAAGGTCGAGCTCCCAA+TGG - chr4.4:68183514-68183533 MS.gene77717:intron 45.0%
TCCACAAGTTCCTCATCTGT+GGG + chr4.4:68182820-68182839 None:intergenic 45.0%
TGTGTGTAGCTCATTTGGCA+TGG - chr4.4:68183047-68183066 MS.gene77717:CDS 45.0%
!! ACTTTTTCTCATGTTCCCCC+GGG - chr4.4:68182781-68182800 MS.gene77717:CDS 45.0%
!! AGCTTTGGACTCTCTAGAAG+TGG + chr4.4:68184763-68184782 None:intergenic 45.0%
!! ATTAGTTTGTACGGGTCGAG+AGG - chr4.4:68184316-68184335 MS.gene77717:intron 45.0%
!! CAAGTTCACCTTTTAGGGGT+TGG + chr4.4:68183761-68183780 None:intergenic 45.0%
!! GCTGGATTTTGGAAAGCAAC+AGG - chr4.4:68183430-68183449 MS.gene77717:intron 45.0%
!! GTTTGGAATGCGACTTGGTT+GGG - chr4.4:68183879-68183898 MS.gene77717:intron 45.0%
!! TATTTTCGACGGTTTGGAGC+AGG - chr4.4:68184495-68184514 MS.gene77717:CDS 45.0%
!! TGGGCTAGTACTGGTAACAT+GGG - chr4.4:68183898-68183917 MS.gene77717:intron 45.0%
!! TTGGGCTAGTACTGGTAACA+TGG - chr4.4:68183897-68183916 MS.gene77717:intron 45.0%
AGCCTAACCCAACCCCTAAA+AGG - chr4.4:68183750-68183769 MS.gene77717:intron 50.0%
CAAGTTCCTCATCTGTGGGA+TGG + chr4.4:68182816-68182835 None:intergenic 50.0%
CGTAATATATGCAGGGGTCG+TGG - chr4.4:68183076-68183095 MS.gene77717:CDS 50.0%
GTAGTCCAAGCCAAGAGTCT+TGG - chr4.4:68184193-68184212 MS.gene77717:intron 50.0%
GTGAGCATGACTCTCCTTGT+TGG - chr4.4:68184581-68184600 MS.gene77717:intron 50.0%
TAGGTTCCATCCCACAGATG+AGG - chr4.4:68182807-68182826 MS.gene77717:CDS 50.0%
TCCCACAGATGAGGAACTTG+TGG - chr4.4:68182816-68182835 MS.gene77717:CDS 50.0%
! CTTTTTCTCATGTTCCCCCG+GGG - chr4.4:68182782-68182801 MS.gene77717:CDS 50.0%
! GAGCAACTGCAGCTGGATTT+TGG - chr4.4:68183419-68183438 MS.gene77717:intron 50.0%
! GTTGGGTTAGGCTCAACTCA+TGG + chr4.4:68183743-68183762 None:intergenic 50.0%
! TGGACGTTTGGAATGCGACT+TGG - chr4.4:68183874-68183893 MS.gene77717:intron 50.0%
! TGGCTTGGACTACATCCTCT+AGG + chr4.4:68184186-68184205 None:intergenic 50.0%
! TTTGGAGCAGGAGGAAGGAT+GGG - chr4.4:68184507-68184526 MS.gene77717:CDS 50.0%
!! CACCTTTTAGGGGTTGGGTT+AGG + chr4.4:68183755-68183774 None:intergenic 50.0%
!! CGTTTGGAATGCGACTTGGT+TGG - chr4.4:68183878-68183897 MS.gene77717:intron 50.0%
ACACACACCACTCACGCCTA+AGG - chr4.4:68183850-68183869 MS.gene77717:intron 55.0%
ACACCACTCACGCCTAAGGT+TGG - chr4.4:68183854-68183873 MS.gene77717:intron 55.0%
CACGCCTAAGGTTGGACGTT+TGG - chr4.4:68183862-68183881 MS.gene77717:intron 55.0%
GCGTGAGTGGTGTGTGTTGA+AGG + chr4.4:68183847-68183866 None:intergenic 55.0%
GTGGGATGGAACCTAAACCC+CGG + chr4.4:68182802-68182821 None:intergenic 55.0%
TGGGATGGAACCTAAACCCC+GGG + chr4.4:68182801-68182820 None:intergenic 55.0%
! GTTTGGAGCAGGAGGAAGGA+TGG - chr4.4:68184506-68184525 MS.gene77717:CDS 55.0%
! TTTCGACGGTTTGGAGCAGG+AGG - chr4.4:68184498-68184517 MS.gene77717:CDS 55.0%
!! CGACTTGGTTGGGCTAGTAC+TGG - chr4.4:68183889-68183908 MS.gene77717:intron 55.0%
CGTCCAACCTTAGGCGTGAG+TGG + chr4.4:68183860-68183879 None:intergenic 60.0%
CTCATGTTCCCCCGGGGTTT+AGG - chr4.4:68182788-68182807 MS.gene77717:CDS 60.0%
GGATGGAACCTAAACCCCGG+GGG + chr4.4:68182799-68182818 None:intergenic 60.0%
GGGATGGAACCTAAACCCCG+GGG + chr4.4:68182800-68182819 None:intergenic 60.0%
! GACGGTTTGGAGCAGGAGGA+AGG - chr4.4:68184502-68184521 MS.gene77717:CDS 60.0%
AGGGGTCGTGGTTCGAACCC+TGG - chr4.4:68183088-68183107 MS.gene77717:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 68182775 68185149 68182775 ID=MS.gene77717
chr4.4 mRNA 68182775 68185149 68182775 ID=MS.gene77717.t1;Parent=MS.gene77717
chr4.4 exon 68184990 68185149 68184990 ID=MS.gene77717.t1.exon1;Parent=MS.gene77717.t1
chr4.4 CDS 68184990 68185149 68184990 ID=cds.MS.gene77717.t1;Parent=MS.gene77717.t1
chr4.4 exon 68184320 68184595 68184320 ID=MS.gene77717.t1.exon2;Parent=MS.gene77717.t1
chr4.4 CDS 68184320 68184595 68184320 ID=cds.MS.gene77717.t1;Parent=MS.gene77717.t1
chr4.4 exon 68182775 68183313 68182775 ID=MS.gene77717.t1.exon3;Parent=MS.gene77717.t1
chr4.4 CDS 68182775 68183313 68182775 ID=cds.MS.gene77717.t1;Parent=MS.gene77717.t1
Gene Sequence

>MS.gene77717

ATGAATACTTTTTCTCATGTTCCCCCGGGGTTTAGGTTCCATCCCACAGATGAGGAACTTGTGGATTACTACCTTAGGAAGAAAATTGATTCAAGAAGGATTGATCTTGATGTCATAAGAGATGTTGACCTTTACAAAATTGAACCATGGGATCTTGAAGGTATAAGATATAACATTGTTTCGAAATTGCAGTTACCGTTGTTGTTGCCATTATGCTCCAAACTTTGATATTAATCCAAACTGCACATAAATACAATCAATATGCATTCTCATGTGTGTAGCTCATTTGGCATGGACATTACGTAATATATGCAGGGGTCGTGGTTCGAACCCTGGACAACCCACTTATATTGTAGTCCCACAAAAAAAGTTCACTATTTAGTGACCGCTTCAGTATCAAATTATTTTTCAGTTTCTTAGTAGGTCTCTAATTTCAATTGCTATGTGACAATTTTATTTTTAACAAAAATGACAATCTTTTTAAGTTTGTGATCGATATATTTTTAACTTGTGATCAATAATTCCTTTTTTATTTTTCTTTTTTGAATTTATAGAGATTTGCAGAATAGGAACCGAAGAACAAAATGAGTGGTATTTTTTTAGCCATAAAGATAAGAAGTATCCAACTGGGACAAGAACAAATAGAGCAACTGCAGCTGGATTTTGGAAAGCAACAGGAAGAGACAAGGCAATCTATAGTAAGCATAATTTGATAGGAATGAGGAAAACATTGGTGTTTTATAAAGGTCGAGCTCCCAATGGACAAAAGTCAGATTGGATAATGCATGAGTATAGGCTTGAAACAGATGAAAATGGCACACCACAGGCAAGTGATTCAAAACTTCAATTCTCTAGATTTATTTAATGTTGGTTAGTTCAAAATTTCTTTATGATTCATTTATATGTGTATAATTAGCTTAAATACATACACGAAAAAGAGTTTCGCCAAAAGTATCGGTTTGAAACCATGAGTTGAGCCTAACCCAACCCCTAAAAGGTGAACTTGTAAGGTAATGATTAAACATCACTTACAAACATATTTTAATGTTTTATCTAATTGAATACGAGACCTTCAACACACACCACTCACGCCTAAGGTTGGACGTTTGGAATGCGACTTGGTTGGGCTAGTACTGGTAACATGGGAAAGAGTGACCCAATGAATGTTGGATAAACACAAATATCATCTTCGTGTTTGGATTGTGTCTTAATCAACCATTACAAAACCGATTTGTAAAATGAGAATTACGCACCACTTATAAACATATATTTAGATCTTATGTCATCCAATATTAGACTTATCTATTGCGTAATGAGTAGAAAATAATTAACATTATTGTTATCATATTAGTTGAAATCGTAATTTCTATGGCAGACATATACACAACAAAATATGAGGCAAAATAAACCTAGAGGATGTAGTCCAAGCCAAGAGTCTTGGAACTTTTTCCAAAACCCTAATTGTTATTGTTGTCGATCGAAAGCTAATTGATAAAGTTGTGTTAACTCTTGGTTTTTTTATAGACAAATGTATGTTATAGATTAGTTTGTACGGGTCGAGAGGAATGTGTTAAAACAGCATTGAGCGAACTTTGAACTTCCTTCTTAATACTCTCAATGTCTCAATCCATACCATTGTACTACGCCTTAGAAGACTAACATTTGTTATTTTGATGAATATATTGTTTAACTCTTTCTATAAACTAACATTTGTTTTTGTTATTTTCGACGGTTTGGAGCAGGAGGAAGGATGGGTTGTATGTAGAGTATTCAAGAAGAGAGTAACAACAACAATTCGCAAAATGAGTGAGCATGACTCTCCTTGTTGGTATGAAGATCAAGTTTCATTCATGCAAGATATGGACTCACCAAACCAAACCTCTCAATCCAATTTGATATACCAACAATTACCATCATATTCTTGCAAAAAAGAGCTAGATAATTTCCCATTCCAAAACATGTCTCGTGACAATTATCTTAATCTTCCACTTCTAGAGAGTCCAAAGCTTGTTCAATCTTCTTCAAACATAACCTCTAATCCAATGGTTACAACATATGACACTATAGATCATTCAAATTCTATGCTTCCTTCATCAATGCTCTTACAAGAAGAACAAGTTATACAAAGTGGTAATCAACAAAACTTTCATGCTATGTATGGAAACAATTCCAATGTTGAACAAGGTATGGTTGATGATCAAGTTACTGATTGGAGAGTTCTTGACAAGTTTGTTGCTTCACAACTTAGTCAAGAAGATGCATCTAAAGTGAATAATAACAACATCTTTCATGGCAATATTGAATTCAGAAATTTGGAGAAACAAGAAATGGTGCCTCATGAAAATGCCTCTACATCAAACACAAGTTGGATATGA
Protein sequence

>MS.gene77717.t1

MNTFSHVPPGFRFHPTDEELVDYYLRKKIDSRRIDLDVIRDVDLYKIEPWDLEEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHNLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQANQVSFMQDMDSPNQTSQSNLIYQQLPSYSCKKELDNFPFQNMSRDNYLNLPLLESPKLVQSSSNITSNPMVTTYDTIDHSNSMLPSSMLLQEEQVIQSGNQQNFHAMYGNNSNVEQGMVDDQVTDWRVLDKFVASQLSQEDASKVNNNNIFHGNIEFRNLEKQEMVPHENASTSNTSWI