AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene78374

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78374.t1 MTR_2g098240 94.778 383 17 3 1 381 1 382 0.0 713
MS.gene78374.t1 MTR_4g065080 64.232 397 96 9 6 357 4 399 3.18e-174 492
MS.gene78374.t1 MTR_8g011780 44.789 355 161 6 9 333 12 361 4.14e-98 298
MS.gene78374.t1 MTR_7g053200 41.408 355 175 6 10 336 6 355 9.84e-89 274
MS.gene78374.t1 MTR_3g010260 37.887 388 195 9 11 355 411 795 1.08e-76 253
MS.gene78374.t1 MTR_4g113790 39.037 374 174 7 12 334 88 458 1.09e-76 245
MS.gene78374.t1 MTR_1g060790 39.944 358 176 7 12 333 467 821 2.88e-76 252
MS.gene78374.t1 MTR_2g027240 38.736 364 178 8 12 333 201 561 7.70e-76 246
MS.gene78374.t1 MTR_8g446990 39.011 364 179 8 8 333 125 483 2.77e-75 243
MS.gene78374.t1 MTR_2g062850 38.933 375 182 9 1 337 159 524 9.60e-75 242
MS.gene78374.t1 MTR_8g070530 40.549 328 172 5 10 331 592 902 1.00e-74 249
MS.gene78374.t1 MTR_6g004720 38.333 360 178 8 12 333 248 601 4.04e-74 242
MS.gene78374.t1 MTR_2g095980 43.252 326 171 6 10 330 366 682 1.32e-73 243
MS.gene78374.t1 MTR_2g085065 38.872 337 169 7 23 323 97 432 1.61e-72 233
MS.gene78374.t1 MTR_2g095980 43.252 326 171 6 10 330 621 937 5.04e-72 242
MS.gene78374.t1 MTR_2g095980 43.252 326 171 6 10 330 621 937 6.36e-72 242
MS.gene78374.t1 MTR_7g081665 38.770 374 179 9 11 343 360 724 6.62e-72 239
MS.gene78374.t1 MTR_8g006870 39.481 347 174 6 12 323 367 712 1.12e-71 238
MS.gene78374.t1 MTR_7g033640 36.538 364 186 7 12 333 229 589 2.31e-71 234
MS.gene78374.t1 MTR_7g104180 37.302 378 191 8 12 353 489 856 2.63e-71 239
MS.gene78374.t1 MTR_4g061610 41.692 331 159 8 8 330 637 941 6.24e-70 236
MS.gene78374.t1 MTR_2g069990 40.841 333 177 6 12 330 91 417 9.01e-70 227
MS.gene78374.t1 MTR_2g018990 38.310 355 183 10 12 333 74 425 3.49e-69 224
MS.gene78374.t1 MTR_8g089420 36.975 357 187 11 12 333 70 423 1.08e-68 223
MS.gene78374.t1 MTR_4g107280 32.641 337 171 8 20 345 92 383 1.92e-48 169
MS.gene78374.t1 MTR_7g073520 31.804 327 172 7 12 333 143 423 1.27e-46 166
MS.gene78374.t1 MTR_6g470940 30.982 397 216 13 3 379 863 1221 1.68e-46 171
MS.gene78374.t1 MTR_5g069000 31.268 339 209 9 3 334 748 1069 3.53e-44 164
MS.gene78374.t1 MTR_4g035835 31.268 339 209 9 3 334 744 1065 7.33e-44 163
MS.gene78374.t1 MTR_4g107280 30.699 329 149 8 20 345 92 344 3.21e-39 144
MS.gene78374.t1 MTR_2g040150 31.183 372 211 16 20 369 116 464 9.13e-38 142
MS.gene78374.t1 MTR_1g042700 28.857 350 201 9 12 337 110 435 1.45e-36 139
MS.gene78374.t1 MTR_1g019340 30.194 361 217 14 12 354 103 446 3.56e-36 137
MS.gene78374.t1 MTR_3g104700 29.948 384 220 15 12 370 89 448 4.04e-36 138
MS.gene78374.t1 MTR_1g019340 30.699 329 202 11 12 326 103 419 5.07e-36 137
MS.gene78374.t1 MTR_1g069735 28.531 354 225 11 12 352 115 453 7.95e-35 134
MS.gene78374.t1 MTR_1g069735 28.531 354 225 11 12 352 115 453 8.02e-35 134
MS.gene78374.t1 MTR_3g104700 29.323 399 220 16 12 370 89 465 1.16e-34 134
MS.gene78374.t1 MTR_1g069735 28.531 354 225 11 12 352 115 453 1.48e-34 134
MS.gene78374.t1 MTR_1g075880 27.451 357 223 11 12 349 112 451 3.76e-33 130
MS.gene78374.t1 MTR_1g442790 29.830 352 220 13 15 351 108 447 2.07e-32 127
MS.gene78374.t1 MTR_1g442790 29.830 352 220 13 15 351 108 447 3.11e-32 127
MS.gene78374.t1 MTR_7g097150 27.901 362 217 12 12 352 115 453 3.98e-32 127
MS.gene78374.t1 MTR_3g110405 29.110 292 154 7 14 300 34 277 1.13e-29 116
MS.gene78374.t1 MTR_1g090917 28.659 328 186 8 8 329 47 332 1.20e-28 117
MS.gene78374.t1 MTR_1g090917 28.659 328 186 8 8 329 47 332 1.24e-28 117
MS.gene78374.t1 MTR_8g035890 27.333 300 157 7 10 300 9 256 1.48e-28 112
MS.gene78374.t1 MTR_8g040300 26.756 299 162 6 10 301 3 251 2.47e-27 109
MS.gene78374.t1 MTR_3g095620 28.197 305 159 9 23 317 31 285 3.55e-27 109
MS.gene78374.t1 MTR_1g080020 28.767 292 141 8 23 300 15 253 5.72e-26 105
MS.gene78374.t1 MTR_2g020380 27.217 327 182 10 14 337 1 274 9.54e-26 109
MS.gene78374.t1 MTR_6g087000 31.330 233 110 6 113 340 855 1042 1.76e-25 108
MS.gene78374.t1 MTR_1g090917 30.579 242 128 5 92 329 2 207 2.63e-25 105
MS.gene78374.t1 MTR_1g090917 30.992 242 127 5 92 329 2 207 3.60e-25 105
MS.gene78374.t1 MTR_7g116390 27.632 304 158 8 10 300 9 263 8.35e-25 103
MS.gene78374.t1 MTR_5g045190 25.000 320 186 7 20 335 242 511 4.54e-24 104
MS.gene78374.t1 MTR_3g099920 26.708 322 180 8 1 316 1 272 2.70e-23 101
MS.gene78374.t1 MTR_1g076370 27.157 313 172 10 1 304 5 270 6.33e-22 97.1
MS.gene78374.t1 MTR_2g016340 25.281 356 192 13 21 370 16 303 1.37e-21 96.3
MS.gene78374.t1 MTR_8g024100 25.743 303 165 10 23 312 21 276 2.37e-21 96.3
MS.gene78374.t1 MTR_7g113490 25.079 315 165 9 21 317 72 333 3.04e-21 95.9
MS.gene78374.t1 MTR_3g466400 25.667 300 171 9 21 316 18 269 5.98e-21 94.4
MS.gene78374.t1 MTR_4g006970 25.309 324 185 11 1 316 1 275 1.44e-20 93.2
MS.gene78374.t1 MTR_6g012980 26.198 313 171 10 11 316 67 326 4.88e-20 91.7
MS.gene78374.t1 MTR_4g132070 26.266 316 153 12 21 316 95 350 1.65e-19 90.5
MS.gene78374.t1 MTR_2g078740 27.500 240 128 6 20 258 18 212 1.94e-19 90.5
MS.gene78374.t1 MTR_2g078740 27.500 240 128 6 20 258 18 212 1.95e-19 90.5
MS.gene78374.t1 MTR_2g078740 27.500 240 128 6 20 258 18 212 1.98e-19 90.5
MS.gene78374.t1 MTR_3g099767 25.161 310 167 10 23 323 118 371 3.42e-19 89.4
MS.gene78374.t1 MTR_8g086380 26.159 302 168 10 21 316 30 282 3.71e-19 89.4
MS.gene78374.t1 MTR_7g106710 27.184 309 155 11 23 316 141 394 4.54e-19 88.6
MS.gene78374.t1 MTR_7g106710 27.184 309 155 11 23 316 141 394 8.73e-19 88.2
MS.gene78374.t1 MTR_2g100030 25.676 296 174 8 41 319 42 308 1.57e-18 87.4
MS.gene78374.t1 MTR_7g106710 27.184 309 155 11 23 316 141 394 1.83e-18 87.4
MS.gene78374.t1 MTR_7g106710 27.184 309 155 11 23 316 141 394 2.21e-18 87.4
MS.gene78374.t1 MTR_4g029020 24.403 377 202 15 21 375 16 331 2.32e-18 86.7
MS.gene78374.t1 MTR_3g466480 25.321 312 164 10 21 313 25 286 3.76e-18 85.9
MS.gene78374.t1 MTR_7g072575 24.506 253 144 6 21 270 16 224 5.37e-18 85.5
MS.gene78374.t1 MTR_1g048630 22.742 299 179 6 20 316 10 258 7.89e-18 85.9
MS.gene78374.t1 MTR_1g100250 25.141 354 181 13 4 337 395 684 9.71e-18 85.5
MS.gene78374.t1 MTR_1g013700 23.592 284 169 7 21 300 17 256 1.09e-17 84.3
MS.gene78374.t1 MTR_5g075060 23.102 303 175 10 21 316 16 267 1.10e-17 84.7
MS.gene78374.t1 MTR_5g075100 26.897 290 153 11 21 300 27 267 1.11e-17 84.7
MS.gene78374.t1 MTR_8g093730 24.843 318 169 10 13 316 295 556 5.69e-17 83.2
MS.gene78374.t1 MTR_3g088715 38.532 109 56 3 213 316 24 126 6.90e-17 77.0
MS.gene78374.t1 MTR_4g128820 24.437 311 175 11 13 316 6 263 1.10e-16 81.6
MS.gene78374.t1 MTR_5g067150 22.830 311 165 11 21 316 13 263 1.67e-16 80.5
MS.gene78374.t1 MTR_1g040875 28.745 247 126 9 21 262 28 229 2.10e-16 80.9
MS.gene78374.t1 MTR_5g067150 22.830 311 165 11 21 316 13 263 2.36e-16 80.5
MS.gene78374.t1 MTR_5g067150 22.830 311 165 11 21 316 13 263 2.42e-16 80.5
MS.gene78374.t1 MTR_1g081000 22.727 242 143 2 20 260 7 205 5.21e-16 80.1
MS.gene78374.t1 MTR_1g081000 22.727 242 143 2 20 260 7 205 5.59e-16 80.1
MS.gene78374.t1 MTR_4g051648 21.136 317 195 5 20 333 11 275 6.84e-16 80.1
MS.gene78374.t1 MTR_3g096230 24.691 243 132 5 21 258 248 444 9.54e-16 79.0
MS.gene78374.t1 MTR_3g096230 24.691 243 132 5 21 258 248 444 1.62e-15 78.6
MS.gene78374.t1 MTR_1g103760 24.138 261 149 8 21 277 16 231 6.34e-15 76.3
MS.gene78374.t1 MTR_1g105290 24.206 252 141 5 21 265 59 267 1.06e-14 76.3
MS.gene78374.t1 MTR_1g105290 24.206 252 141 5 21 265 59 267 1.12e-14 75.9
MS.gene78374.t1 MTR_1g105290 24.206 252 141 5 21 265 59 267 1.35e-14 75.9
MS.gene78374.t1 MTR_4g075410 25.424 236 134 1 23 258 26 219 1.44e-14 75.9
MS.gene78374.t1 MTR_4g075410 25.424 236 134 1 23 258 26 219 1.51e-14 75.9
MS.gene78374.t1 MTR_4g074875 26.667 195 101 1 64 258 67 219 4.37e-14 74.7
MS.gene78374.t1 MTR_4g074875 26.667 195 101 1 64 258 67 219 4.55e-14 74.3
MS.gene78374.t1 MTR_1g052115 21.379 290 180 6 14 299 1 246 5.31e-14 74.3
MS.gene78374.t1 MTR_3g076970 25.194 258 149 8 23 275 32 250 1.60e-13 71.6
MS.gene78374.t1 MTR_7g011800 23.889 360 190 12 12 336 115 425 7.27e-13 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78374.t1 AT1G51170 56.709 395 145 8 7 378 13 404 1.94e-147 423
MS.gene78374.t1 AT3G20830 56.927 397 140 7 12 381 16 408 1.16e-146 421
MS.gene78374.t1 AT3G25250 47.839 347 155 5 12 338 12 352 8.48e-103 310
MS.gene78374.t1 AT4G13000 45.507 345 170 5 4 337 7 344 8.53e-99 298
MS.gene78374.t1 AT1G79250 38.220 382 188 8 12 347 141 520 1.22e-78 252
MS.gene78374.t1 AT1G79250 38.220 382 188 8 12 347 141 520 1.22e-78 252
MS.gene78374.t1 AT1G79250 38.220 382 188 8 12 347 141 520 1.22e-78 252
MS.gene78374.t1 AT1G79250 38.220 382 188 8 12 347 141 520 1.22e-78 252
MS.gene78374.t1 AT5G55910 39.617 366 179 7 12 337 104 467 2.61e-77 247
MS.gene78374.t1 AT5G55910 39.617 366 179 7 12 337 104 467 2.61e-77 247
MS.gene78374.t1 AT5G58140 41.493 335 163 7 8 331 568 880 5.15e-77 255
MS.gene78374.t1 AT5G58140 41.493 335 163 7 8 331 568 880 5.15e-77 255
MS.gene78374.t1 AT5G58140 41.493 335 163 7 8 331 568 880 5.15e-77 255
MS.gene78374.t1 AT5G58140 41.493 335 163 7 8 331 568 880 5.15e-77 255
MS.gene78374.t1 AT5G58140 41.493 335 163 7 8 331 568 880 5.15e-77 255
MS.gene78374.t1 AT2G36350 40.110 364 174 7 12 333 554 915 6.06e-77 256
MS.gene78374.t1 AT5G47750 40.055 362 174 9 12 333 186 544 8.58e-77 248
MS.gene78374.t1 AT3G12690 40.057 352 176 8 12 333 180 526 1.76e-76 247
MS.gene78374.t1 AT3G12690 40.057 352 176 8 12 333 180 526 1.76e-76 247
MS.gene78374.t1 AT3G12690 40.057 352 176 8 12 333 180 526 1.76e-76 247
MS.gene78374.t1 AT5G58140 41.945 329 158 7 8 325 568 874 3.04e-76 253
MS.gene78374.t1 AT5G40030 40.166 361 182 9 9 337 106 464 1.48e-75 243
MS.gene78374.t1 AT2G44830 40.669 359 174 8 12 333 358 714 1.49e-74 246
MS.gene78374.t1 AT2G44830 40.669 359 174 8 12 333 358 714 1.49e-74 246
MS.gene78374.t1 AT2G44830 40.669 359 174 8 12 333 358 714 1.49e-74 246
MS.gene78374.t1 AT4G26610 39.344 366 176 8 12 337 118 477 1.64e-74 240
MS.gene78374.t1 AT2G34650 38.793 348 187 8 10 334 68 412 3.35e-74 237
MS.gene78374.t1 AT1G16440 37.468 395 202 10 12 380 108 483 5.93e-74 238
MS.gene78374.t1 AT3G45780 42.988 328 167 5 8 330 654 966 1.68e-73 247
MS.gene78374.t1 AT3G45780 42.988 328 167 5 8 330 654 966 1.68e-73 247
MS.gene78374.t1 AT3G44610 38.506 348 166 7 23 323 75 421 1.36e-72 233
MS.gene78374.t1 AT3G52890 39.211 380 178 10 12 347 533 903 3.24e-72 243
MS.gene78374.t1 AT3G52890 39.211 380 178 10 12 347 533 903 3.24e-72 243
MS.gene78374.t1 AT3G52890 39.211 380 178 10 12 347 533 903 3.24e-72 243
MS.gene78374.t1 AT3G52890 39.211 380 178 10 12 347 533 903 3.24e-72 243
MS.gene78374.t1 AT5G03640 39.118 363 177 8 12 333 536 895 3.65e-71 239
MS.gene78374.t1 AT5G03640 39.118 363 177 8 12 333 536 895 3.65e-71 239
MS.gene78374.t1 AT3G27580 37.500 360 184 7 12 333 177 533 1.13e-70 232
MS.gene78374.t1 AT3G27580 37.500 360 184 7 12 333 177 533 1.13e-70 232
MS.gene78374.t1 AT1G53700 40.469 341 189 7 3 332 79 416 8.33e-69 224
MS.gene78374.t1 AT3G14370 37.971 345 179 8 8 330 79 410 2.23e-65 215
MS.gene78374.t1 AT3G08730 32.523 329 166 9 12 333 129 408 1.57e-49 173
MS.gene78374.t1 AT3G08730 32.523 329 166 9 12 333 129 408 1.57e-49 173
MS.gene78374.t1 AT3G08720 32.749 342 172 10 2 334 123 415 3.20e-49 172
MS.gene78374.t1 AT3G08720 32.749 342 172 10 2 334 123 415 3.20e-49 172
MS.gene78374.t1 AT3G08720 32.749 342 172 10 2 334 123 415 3.20e-49 172
MS.gene78374.t1 AT3G08720 32.749 342 172 10 2 334 123 415 3.20e-49 172
MS.gene78374.t1 AT3G17850 29.923 391 216 14 3 363 869 1231 4.13e-44 164
MS.gene78374.t1 AT1G45160 33.134 335 184 10 12 333 665 972 4.56e-44 163
MS.gene78374.t1 AT1G45160 33.735 332 186 10 12 333 665 972 4.59e-44 163
MS.gene78374.t1 AT1G48490 29.674 337 209 7 12 342 823 1137 1.42e-43 162
MS.gene78374.t1 AT1G48490 29.674 337 209 7 12 342 823 1137 1.42e-43 162
MS.gene78374.t1 AT1G48490 29.674 337 209 7 12 342 823 1137 1.42e-43 162
MS.gene78374.t1 AT1G48490 29.674 337 209 7 12 342 824 1138 1.49e-43 162
MS.gene78374.t1 AT5G62310 28.537 410 231 12 3 381 739 1117 2.59e-43 161
MS.gene78374.t1 AT3G10540 31.034 319 177 7 21 333 49 330 3.37e-42 154
MS.gene78374.t1 AT2G19400 32.047 337 196 11 12 326 100 425 3.84e-41 152
MS.gene78374.t1 AT5G04510 30.094 319 180 7 21 333 48 329 2.45e-39 145
MS.gene78374.t1 AT5G04510 30.094 319 180 7 21 333 48 329 7.37e-39 145
MS.gene78374.t1 AT1G30640 30.409 342 208 11 10 334 20 348 3.23e-38 143
MS.gene78374.t1 AT1G30640 30.409 342 208 11 10 334 113 441 1.29e-37 143
MS.gene78374.t1 AT1G30640 30.409 342 208 11 10 334 113 441 1.29e-37 143
MS.gene78374.t1 AT2G26700 46.203 158 82 2 12 166 82 239 3.07e-37 141
MS.gene78374.t1 AT2G26700 45.652 138 64 2 214 341 354 490 3.07e-31 124
MS.gene78374.t1 AT4G33080 28.869 336 207 8 12 326 89 413 2.69e-36 138
MS.gene78374.t1 AT4G33080 28.869 336 207 8 12 326 89 413 3.03e-36 138
MS.gene78374.t1 AT5G09890 28.977 352 216 12 12 345 97 432 1.99e-35 136
MS.gene78374.t1 AT5G09890 28.977 352 216 12 12 345 97 432 2.35e-35 136
MS.gene78374.t1 AT3G23310 29.024 379 221 14 12 366 115 469 5.36e-35 135
MS.gene78374.t1 AT4G14350 29.070 344 208 11 12 337 114 439 3.62e-33 130
MS.gene78374.t1 AT4G14350 29.070 344 208 11 12 337 114 439 3.94e-33 130
MS.gene78374.t1 AT4G14350 29.070 344 208 11 12 337 114 439 3.94e-33 130
MS.gene78374.t1 AT4G14350 29.070 344 208 11 12 337 114 439 3.94e-33 130
MS.gene78374.t1 AT5G04510 30.686 277 150 8 21 292 48 287 1.11e-31 122
MS.gene78374.t1 AT1G03920 27.851 377 225 15 12 366 19 370 1.33e-31 124
MS.gene78374.t1 AT2G45490 29.329 283 147 5 23 300 28 262 2.49e-31 120
MS.gene78374.t1 AT1G03920 27.851 377 225 15 12 366 132 483 4.75e-31 124
MS.gene78374.t1 AT1G03920 27.851 377 225 15 12 366 132 483 4.75e-31 124
MS.gene78374.t1 AT2G20470 26.462 359 225 11 12 352 119 456 1.51e-28 117
MS.gene78374.t1 AT2G20470 26.462 359 225 11 12 352 119 456 1.76e-28 117
MS.gene78374.t1 AT2G20470 26.462 359 225 11 12 352 119 456 1.76e-28 117
MS.gene78374.t1 AT2G45490 28.405 257 134 4 23 277 28 236 1.88e-28 112
MS.gene78374.t1 AT5G18700 27.829 327 176 9 14 337 1 270 2.77e-27 114
MS.gene78374.t1 AT2G25880 27.622 286 154 7 21 301 29 266 6.05e-27 108
MS.gene78374.t1 AT4G32830 28.070 285 152 7 21 300 35 271 8.32e-27 108
MS.gene78374.t1 AT2G25880 27.622 286 154 7 21 301 42 279 8.84e-27 108
MS.gene78374.t1 AT2G20050 29.796 245 123 4 116 355 877 1077 1.06e-26 112
MS.gene78374.t1 AT2G20050 29.796 245 123 4 116 355 880 1080 1.22e-26 112
MS.gene78374.t1 AT2G25880 27.622 286 154 7 21 301 90 327 3.62e-26 108
MS.gene78374.t1 AT4G18700 27.619 315 172 10 8 316 17 281 2.59e-24 104
MS.gene78374.t1 AT4G04720 26.814 317 152 12 21 317 84 340 3.13e-23 101
MS.gene78374.t1 AT4G04720 26.814 317 152 12 21 317 84 340 3.13e-23 101
MS.gene78374.t1 AT3G06030 26.332 319 163 9 21 321 72 336 6.33e-22 98.2
MS.gene78374.t1 AT4G29810 26.994 326 176 9 3 316 56 331 7.14e-22 96.3
MS.gene78374.t1 AT4G29810 26.994 326 176 9 3 316 65 340 7.45e-22 96.3
MS.gene78374.t1 AT1G29230 27.362 307 164 12 3 300 61 317 3.37e-21 95.5
MS.gene78374.t1 AT1G69220 24.342 304 178 6 20 319 252 507 8.29e-21 94.7
MS.gene78374.t1 AT4G29810 26.861 309 168 8 3 299 65 327 1.85e-20 91.7
MS.gene78374.t1 AT1G69220 23.750 320 192 6 4 319 209 480 5.20e-20 92.4
MS.gene78374.t1 AT5G25110 24.296 284 167 7 21 300 47 286 5.94e-20 91.7
MS.gene78374.t1 AT1G54960 25.896 251 136 5 21 264 72 279 7.28e-20 92.0
MS.gene78374.t1 AT1G54960 25.896 251 136 5 21 264 72 279 7.28e-20 92.0
MS.gene78374.t1 AT4G26070 26.154 325 178 8 4 316 42 316 7.61e-20 90.1
MS.gene78374.t1 AT4G21940 25.879 313 160 11 21 317 106 362 8.91e-20 91.3
MS.gene78374.t1 AT4G26070 26.154 325 178 8 4 316 55 329 9.66e-20 89.7
MS.gene78374.t1 AT4G26070 26.154 325 178 8 4 316 55 329 9.66e-20 89.7
MS.gene78374.t1 AT4G21940 25.879 313 160 11 21 317 106 362 1.03e-19 91.3
MS.gene78374.t1 AT4G21940 25.879 313 160 11 21 317 106 362 1.12e-19 91.3
MS.gene78374.t1 AT4G26070 26.154 325 178 8 4 316 54 328 1.26e-19 89.7
MS.gene78374.t1 AT2G34180 26.235 324 179 13 2 316 40 312 1.30e-19 90.9
MS.gene78374.t1 AT1G12680 24.497 298 159 10 23 312 113 352 1.61e-19 90.1
MS.gene78374.t1 AT1G09000 25.498 251 137 5 21 264 73 280 1.90e-19 90.5
MS.gene78374.t1 AT2G26980 25.836 329 175 13 21 340 18 286 2.32e-19 89.0
MS.gene78374.t1 AT1G09000 25.100 251 138 4 21 264 73 280 2.53e-19 90.1
MS.gene78374.t1 AT2G26980 26.074 326 172 13 21 337 18 283 3.44e-19 89.0
MS.gene78374.t1 AT2G26980 25.836 329 175 13 21 340 28 296 3.45e-19 89.4
MS.gene78374.t1 AT5G45810 25.253 297 170 9 10 300 21 271 3.73e-19 89.4
MS.gene78374.t1 AT2G26980 25.836 329 175 13 21 340 18 286 3.98e-19 89.0
MS.gene78374.t1 AT3G50530 26.846 298 177 11 23 300 154 430 4.48e-19 89.4
MS.gene78374.t1 AT3G15220 27.500 240 128 6 20 258 18 212 6.99e-19 89.0
MS.gene78374.t1 AT5G10930 23.509 285 169 7 21 300 16 256 1.26e-18 87.4
MS.gene78374.t1 AT5G45820 25.172 290 157 9 21 300 16 255 1.60e-18 87.0
MS.gene78374.t1 AT4G26070 26.766 269 149 5 4 270 55 277 1.75e-18 85.5
MS.gene78374.t1 AT1G50240 22.623 305 184 6 20 322 9 263 1.79e-18 88.2
MS.gene78374.t1 AT1G50240 22.623 305 184 6 20 322 9 263 1.79e-18 88.2
MS.gene78374.t1 AT2G30360 26.667 285 161 10 21 300 25 266 3.23e-18 86.3
MS.gene78374.t1 AT1G08650 26.557 305 167 8 8 300 3 262 3.26e-18 84.3
MS.gene78374.t1 AT1G08650 26.557 305 167 8 8 300 3 262 5.20e-18 83.6
MS.gene78374.t1 AT3G04530 25.424 295 166 6 15 300 9 258 5.67e-18 83.6
MS.gene78374.t1 AT1G54510 23.967 242 140 3 20 260 7 205 7.49e-18 85.9
MS.gene78374.t1 AT1G54510 23.967 242 140 3 20 260 7 205 7.49e-18 85.9
MS.gene78374.t1 AT1G54510 23.967 242 140 3 20 260 7 205 7.49e-18 85.9
MS.gene78374.t1 AT1G54510 23.967 242 140 3 20 260 7 205 7.49e-18 85.9
MS.gene78374.t1 AT5G01810 25.000 284 165 9 21 300 16 255 9.50e-18 84.3
MS.gene78374.t1 AT5G14720 23.438 384 214 10 12 381 11 328 1.09e-17 85.1
MS.gene78374.t1 AT5G14720 23.438 384 214 10 12 381 11 328 1.09e-17 85.1
MS.gene78374.t1 AT5G01810 24.648 284 166 8 21 300 16 255 1.26e-17 84.3
MS.gene78374.t1 AT5G01810 24.648 284 166 8 21 300 16 255 1.26e-17 84.3
MS.gene78374.t1 AT3G63280 22.635 296 179 5 20 312 7 255 1.34e-17 84.7
MS.gene78374.t1 AT3G63280 22.635 296 179 5 20 312 7 255 1.34e-17 84.7
MS.gene78374.t1 AT3G63280 22.635 296 179 5 20 312 7 255 1.34e-17 84.7
MS.gene78374.t1 AT3G63280 22.635 296 179 5 20 312 61 309 1.80e-17 84.7
MS.gene78374.t1 AT2G26980 26.224 286 154 11 21 297 18 255 2.96e-17 81.3
MS.gene78374.t1 AT2G17890 26.280 293 156 10 21 300 112 357 3.92e-17 83.6
MS.gene78374.t1 AT1G53165 27.083 240 129 6 20 258 18 212 4.14e-17 83.6
MS.gene78374.t1 AT1G53165 27.083 240 129 6 20 258 18 212 4.53e-17 83.6
MS.gene78374.t1 AT1G53165 27.083 240 129 6 20 258 18 212 4.94e-17 83.2
MS.gene78374.t1 AT4G14580 25.321 312 175 10 1 300 1 266 5.95e-17 82.4
MS.gene78374.t1 AT4G04740 26.103 272 130 10 61 317 114 329 7.35e-17 82.4
MS.gene78374.t1 AT4G04740 26.103 272 130 10 61 317 114 329 7.35e-17 82.4
MS.gene78374.t1 AT4G04740 26.103 272 130 10 61 317 114 329 7.35e-17 82.4
MS.gene78374.t1 AT4G04740 26.103 272 130 10 61 317 114 329 7.35e-17 82.4
MS.gene78374.t1 AT4G04740 26.103 272 130 10 61 317 114 329 7.35e-17 82.4
MS.gene78374.t1 AT4G04740 26.103 272 130 10 61 317 114 329 7.35e-17 82.4
MS.gene78374.t1 AT3G44200 22.667 300 182 5 20 316 11 263 7.40e-17 82.8
MS.gene78374.t1 AT3G44200 22.667 300 182 5 20 316 11 263 7.40e-17 82.8
MS.gene78374.t1 AT4G04740 26.103 272 130 10 61 317 114 329 7.41e-17 82.4
MS.gene78374.t1 AT4G24400 24.590 305 165 11 21 315 13 262 7.84e-17 82.0
MS.gene78374.t1 AT4G24400 24.194 310 160 11 21 315 13 262 9.52e-17 81.6
MS.gene78374.t1 AT2G38490 25.410 244 137 6 21 262 32 232 1.23e-16 81.6
MS.gene78374.t1 AT5G28290 22.500 280 171 4 20 296 7 243 1.36e-16 81.6
MS.gene78374.t1 AT3G04810 24.498 249 142 5 14 260 1 205 1.51e-16 81.6
MS.gene78374.t1 AT3G04810 24.498 249 142 5 14 260 1 205 1.51e-16 81.6
MS.gene78374.t1 AT3G04810 24.498 249 142 5 14 260 1 205 1.51e-16 81.6
MS.gene78374.t1 AT5G28290 22.500 280 171 4 20 296 7 243 1.53e-16 81.6
MS.gene78374.t1 AT5G28290 22.500 280 171 4 20 296 7 243 1.53e-16 81.6
MS.gene78374.t1 AT1G53570 25.065 387 204 14 5 371 206 526 2.45e-16 81.3
MS.gene78374.t1 AT1G53570 25.065 387 204 14 5 371 206 526 2.45e-16 81.3
MS.gene78374.t1 AT1G63700 26.032 315 157 11 21 318 404 659 2.53e-16 81.3
MS.gene78374.t1 AT1G63700 26.032 315 157 11 21 318 404 659 2.53e-16 81.3
MS.gene78374.t1 AT1G53570 24.548 387 207 14 5 371 206 527 3.36e-16 80.5
MS.gene78374.t1 AT1G18350 22.101 276 160 7 3 271 30 257 4.79e-16 78.6
MS.gene78374.t1 AT1G53570 24.740 384 203 14 5 368 206 523 1.65e-15 78.6
MS.gene78374.t1 AT1G53570 24.675 385 203 14 5 368 206 524 2.16e-15 78.2
MS.gene78374.t1 AT3G20860 20.430 279 177 2 23 299 10 245 2.55e-15 77.4
MS.gene78374.t1 AT1G53570 24.675 385 203 14 5 368 206 524 2.55e-15 77.8
MS.gene78374.t1 AT3G23000 24.561 285 162 10 23 300 31 269 3.09e-15 77.4
MS.gene78374.t1 AT5G07070 23.320 253 147 7 21 270 16 224 7.07e-15 76.3
MS.gene78374.t1 AT4G30960 24.686 239 135 5 64 300 72 267 1.69e-14 75.1
MS.gene78374.t1 AT1G73500 22.741 321 183 8 9 316 39 307 1.78e-14 73.9
MS.gene78374.t1 AT3G13530 25.424 236 134 1 23 258 26 219 3.06e-14 75.1
MS.gene78374.t1 AT3G07980 25.000 236 135 1 23 258 26 219 3.40e-14 75.1
MS.gene78374.t1 AT3G07980 25.000 236 135 1 23 258 26 219 3.80e-14 74.7
MS.gene78374.t1 AT1G32320 25.237 317 167 11 13 316 44 303 1.21e-13 71.2
MS.gene78374.t1 AT2G25880 33.333 99 63 1 206 301 136 234 1.43e-12 67.8
MS.gene78374.t1 AT1G51660 24.066 241 129 4 23 258 85 276 2.73e-12 67.8
MS.gene78374.t1 AT5G50180 23.944 284 170 9 23 299 26 270 8.65e-12 66.2
MS.gene78374.t1 AT5G58140 30.435 115 77 2 8 120 568 681 6.40e-11 64.3

Find 95 sgRNAs with CRISPR-Local

Find 112 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTATGGGAAAACACCGTTTA+AGG 0.214990 2.3:-5119412 MS.gene78374:CDS
TTTGAAACGGCTCAGTTAAT+TGG 0.230681 2.3:-5119921 MS.gene78374:CDS
CCGTCGCCGCGGATTACTTC+CGG 0.327605 2.3:+5119489 None:intergenic
GTTTGAGGTTGTTGAGGTTA+AGG 0.334202 2.3:+5120135 None:intergenic
AACGTTCTTATTCAACAATC+TGG 0.349756 2.3:-5119732 MS.gene78374:CDS
CGTCGCCGCGGATTACTTCC+GGG 0.352639 2.3:+5119490 None:intergenic
AGATCACCTCCTGAGCAATA+TGG 0.363728 2.3:+5119888 None:intergenic
TTCAAGAAGCTTGAATTTGT+TGG 0.364298 2.3:-5119354 MS.gene78374:CDS
CTCCCAACGTGCTCGACGTT+CGG 0.366197 2.3:+5119998 None:intergenic
TGGAGGAGCTAATGAAATTA+AGG 0.369595 2.3:-5119259 MS.gene78374:CDS
CGCCGAACGTCGAGCACGTT+GGG 0.370229 2.3:-5120000 MS.gene78374:CDS
AGGTTAAGGTCTTGTGTACT+AGG 0.388335 2.3:+5120149 None:intergenic
TTCTTATTCTTCCCCTTAAA+CGG 0.388670 2.3:+5119399 None:intergenic
TATTTGACGGCGGAGGAATT+CGG 0.390287 2.3:-5119153 MS.gene78374:CDS
TATGGGAAAACACCGTTTAA+GGG 0.398885 2.3:-5119411 MS.gene78374:CDS
TCCATTCCTCCCATCCATCC+TGG 0.408154 2.3:-5119949 MS.gene78374:CDS
TGCCGTCGTCGTCGCCGTTA+CGG 0.416328 2.3:-5119092 MS.gene78374:CDS
TGGAAGGAAAACAGCGTTAA+CGG 0.421220 2.3:-5119334 MS.gene78374:CDS
CTCAAACCACTCAAAATATT+AGG 0.425265 2.3:-5120119 MS.gene78374:CDS
AAGGATCCATTGAAGAGATT+AGG 0.425634 2.3:-5119288 MS.gene78374:CDS
TTAAGCTACGAGATGTTGTA+TGG 0.433577 2.3:-5119429 MS.gene78374:CDS
TCATCTCTCGACGGAATAAA+CGG 0.437394 2.3:+5119180 None:intergenic
GTCACCGTCGTCTGAGTTTG+AGG 0.438899 2.3:-5119070 MS.gene78374:CDS
ACTCAATCGGCGAATTAGTC+CGG 0.447258 2.3:-5119586 MS.gene78374:CDS
GAAAAGTCTAACTCGTTTGT+TGG 0.462299 2.3:-5119531 MS.gene78374:CDS
ACGTAAACTTTCACACAAAA+CGG 0.466415 2.3:-5119679 MS.gene78374:CDS
AAACGGCTCAGTTAATTGGC+TGG 0.467130 2.3:-5119917 MS.gene78374:CDS
TCAAAGTTGCCCAGGATGGA+TGG 0.472882 2.3:+5119939 None:intergenic
AGAAGACACGGTCCGTTTGT+TGG 0.477023 2.3:+5119850 None:intergenic
CTCAATCCACGACGACTCAC+CGG 0.481389 2.3:+5119567 None:intergenic
ATATTAGGCAAAGGAGCAAT+GGG 0.488514 2.3:-5120104 MS.gene78374:CDS
CCCAGGATGGATGGGAGGAA+TGG 0.499957 2.3:+5119948 None:intergenic
ACGTAACCTAATCTCTTCAA+TGG 0.502638 2.3:+5119282 None:intergenic
GGTAAAATGGGAAATGTTGA+CGG 0.504814 2.3:-5119217 MS.gene78374:CDS
GATGGAGAATTCCACTCAAT+CGG 0.506985 2.3:-5119599 MS.gene78374:CDS
AATATTAGGCAAAGGAGCAA+TGG 0.515425 2.3:-5120105 MS.gene78374:CDS
GAATCTCTGCTATGTAGAAA+CGG 0.516064 2.3:+5119814 None:intergenic
AACGGCTCAGTTAATTGGCT+GGG 0.516902 2.3:-5119916 MS.gene78374:CDS
CAAAGTTGCCCAGGATGGAT+GGG 0.520980 2.3:+5119940 None:intergenic
TGCGCTCCGTTACCAACAAA+CGG 0.524239 2.3:-5119862 MS.gene78374:CDS
AAATGTTGACGGAGGTTGTA+CGG 0.525214 2.3:-5119206 MS.gene78374:CDS
AAGAGATTAGGTTACGTTGG+AGG 0.527362 2.3:-5119276 MS.gene78374:CDS
GGACTAATTCGCCGATTGAG+TGG 0.528324 2.3:+5119588 None:intergenic
GAGGAATGGATGTGATAAAG+TGG 0.538669 2.3:+5119962 None:intergenic
GAGCCGTTTCAAAGTTGCCC+AGG 0.539709 2.3:+5119931 None:intergenic
CATCCTGGGCAACTTTGAAA+CGG 0.540547 2.3:-5119934 MS.gene78374:CDS
CACAGCAGAGTACGTCGCCC+CGG 0.544316 2.3:-5119508 MS.gene78374:CDS
GATCGAACGGTTGTTAGAGA+AGG 0.544362 2.3:-5119307 MS.gene78374:CDS
CACGGTCCGTTTGTTGGTAA+CGG 0.546711 2.3:+5119856 None:intergenic
CCATTCCTCCCATCCATCCT+GGG 0.550555 2.3:-5119948 MS.gene78374:CDS
TGGGCCGTTCCATATTGCTC+AGG 0.553646 2.3:-5119897 MS.gene78374:CDS
AGAAGCTTGAATTTGTTGGA+AGG 0.553916 2.3:-5119350 MS.gene78374:CDS
TTGAAGAGATTAGGTTACGT+TGG 0.554323 2.3:-5119279 MS.gene78374:CDS
GTCAACTACTTTGAGTGCCA+TGG 0.555726 2.3:+5120040 None:intergenic
ACGTTCGGCGTCGTGTGTGG+AGG 0.558783 2.3:+5120013 None:intergenic
GTGGATTCTGCTATCTTCGA+CGG 0.561764 2.3:+5119644 None:intergenic
GAGAGATGACGGTTATTTGA+CGG 0.561885 2.3:-5119166 MS.gene78374:CDS
TTTATTCCGTCGAGAGATGA+CGG 0.563993 2.3:-5119177 MS.gene78374:CDS
CGTTTCAAAGTTGCCCAGGA+TGG 0.564263 2.3:+5119935 None:intergenic
GGCGGAGGAATTCGGTGGAG+TGG 0.569972 2.3:-5119145 MS.gene78374:CDS
ATTAGTCCGGTGAGTCGTCG+TGG 0.574660 2.3:-5119573 MS.gene78374:CDS
TGAGTGGTTTGAGGTTGTTG+AGG 0.578898 2.3:+5120129 None:intergenic
TGACGGTTATTTGACGGCGG+AGG 0.580618 2.3:-5119160 MS.gene78374:CDS
TAAGCTACGAGATGTTGTAT+GGG 0.582681 2.3:-5119428 MS.gene78374:CDS
TCGACGTTCGGCGTCGTGTG+TGG 0.585011 2.3:+5120010 None:intergenic
CCGGAAGTAATCCGCGGCGA+CGG 0.589107 2.3:-5119489 MS.gene78374:CDS
GTCGCCGCGGATTACTTCCG+GGG 0.591913 2.3:+5119491 None:intergenic
CCACTCAAAATATTAGGCAA+AGG 0.592566 2.3:-5120113 MS.gene78374:CDS
ATGGGAAAACACCGTTTAAG+GGG 0.596069 2.3:-5119410 MS.gene78374:CDS
CTTGAACATCTTCATACCAT+GGG 0.597222 2.3:-5119783 MS.gene78374:CDS
GACCGTAACGGCGACGACGA+CGG 0.597227 2.3:+5119090 None:intergenic
TCTTGAACATCTTCATACCA+TGG 0.599326 2.3:-5119784 MS.gene78374:CDS
GCCGTTCCATATTGCTCAGG+AGG 0.603060 2.3:-5119894 MS.gene78374:CDS
TTGACGGCGGAGGAATTCGG+TGG 0.604647 2.3:-5119150 MS.gene78374:CDS
CGAAATCAGTTAACGTGACG+TGG 0.610579 2.3:+5119709 None:intergenic
ACCTCCTGAGCAATATGGAA+CGG 0.615838 2.3:+5119893 None:intergenic
ACGAATCTCAACGTAAAACT+CGG 0.616793 2.3:-5119623 MS.gene78374:CDS
TCTTGTGTACTAGGTGATGT+TGG 0.617524 2.3:+5120158 None:intergenic
CTCAACGTAAAACTCGGCGA+TGG 0.629173 2.3:-5119617 MS.gene78374:CDS
CGTTAACGGATTTGATCGAA+CGG 0.633392 2.3:-5119320 MS.gene78374:CDS
CGAATTCATGTCCGTCGCCG+CGG 0.635238 2.3:+5119478 None:intergenic
TCAGACGACGGTGACCGTAA+CGG 0.637892 2.3:+5119078 None:intergenic
TTGCTGTTGTTGAGAAGACA+CGG 0.638083 2.3:+5119838 None:intergenic
CTATCCTCAAACTCAGACGA+CGG 0.647272 2.3:+5119066 None:intergenic
AGTTGCCCAGGATGGATGGG+AGG 0.654044 2.3:+5119943 None:intergenic
GTCGCCCCGGAAGTAATCCG+CGG 0.664172 2.3:-5119495 MS.gene78374:CDS
CGTGGATTGAGTTTCTCCGA+CGG 0.669810 2.3:-5119555 MS.gene78374:CDS
AAATAACCGTCATCTCTCGA+CGG 0.670876 2.3:+5119171 None:intergenic
ACGCCGAACGTCGAGCACGT+TGG 0.671279 2.3:-5120001 MS.gene78374:CDS
GTCACGATAAGCTATGCCCA+TGG 0.680568 2.3:+5119767 None:intergenic
AACTACTTTGAGTGCCATGG+TGG 0.680601 2.3:+5120043 None:intergenic
AAAATGGGAAATGTTGACGG+AGG 0.693491 2.3:-5119214 MS.gene78374:CDS
CAACAACGTTAACACCACCA+TGG 0.694696 2.3:-5120057 MS.gene78374:CDS
AGATGACGGTTATTTGACGG+CGG 0.716338 2.3:-5119163 MS.gene78374:CDS
TCTCTCGACGGAATAAACGG+TGG 0.757144 2.3:+5119183 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AACGTTCTTATTCAACAATC+TGG - chr2.3:5119479-5119498 MS.gene78374:CDS 30.0%
ACGTAAACTTTCACACAAAA+CGG - chr2.3:5119532-5119551 MS.gene78374:CDS 30.0%
CTCAAACCACTCAAAATATT+AGG - chr2.3:5119092-5119111 MS.gene78374:CDS 30.0%
TTCAAGAAGCTTGAATTTGT+TGG - chr2.3:5119857-5119876 MS.gene78374:CDS 30.0%
TTCTTATTCTTCCCCTTAAA+CGG + chr2.3:5119815-5119834 None:intergenic 30.0%
! TGTTGAATAAGAACGTTTTC+TGG + chr2.3:5119476-5119495 None:intergenic 30.0%
!! ATGAATTCGCAGTTGATTTT+TGG - chr2.3:5119747-5119766 MS.gene78374:CDS 30.0%
!! CTAATATTTTGAGTGGTTTG+AGG + chr2.3:5119094-5119113 None:intergenic 30.0%
!! TGAATTCGCAGTTGATTTTT+GGG - chr2.3:5119748-5119767 MS.gene78374:CDS 30.0%
!!! AGTTTTTTAGAGGGGTAAAA+TGG - chr2.3:5119981-5120000 MS.gene78374:CDS 30.0%
!!! GTTTTTTAGAGGGGTAAAAT+GGG - chr2.3:5119982-5120001 MS.gene78374:CDS 30.0%
!!! TAAGAACGTTTTCTGGTTTA+AGG + chr2.3:5119469-5119488 None:intergenic 30.0%
!!! TGTTAACGTTGTTGTTTTGT+TGG + chr2.3:5119148-5119167 None:intergenic 30.0%
AAGGATCCATTGAAGAGATT+AGG - chr2.3:5119923-5119942 MS.gene78374:CDS 35.0%
AATATTAGGCAAAGGAGCAA+TGG - chr2.3:5119106-5119125 MS.gene78374:CDS 35.0%
ACGAATCTCAACGTAAAACT+CGG - chr2.3:5119588-5119607 MS.gene78374:CDS 35.0%
ACGTAACCTAATCTCTTCAA+TGG + chr2.3:5119932-5119951 None:intergenic 35.0%
ATATTAGGCAAAGGAGCAAT+GGG - chr2.3:5119107-5119126 MS.gene78374:CDS 35.0%
CCACTCAAAATATTAGGCAA+AGG - chr2.3:5119098-5119117 MS.gene78374:CDS 35.0%
CTTGAACATCTTCATACCAT+GGG - chr2.3:5119428-5119447 MS.gene78374:CDS 35.0%
GAAAAGTCTAACTCGTTTGT+TGG - chr2.3:5119680-5119699 MS.gene78374:CDS 35.0%
GAATCTCTGCTATGTAGAAA+CGG + chr2.3:5119400-5119419 None:intergenic 35.0%
GGTAAAATGGGAAATGTTGA+CGG - chr2.3:5119994-5120013 MS.gene78374:CDS 35.0%
TAAGCTACGAGATGTTGTAT+GGG - chr2.3:5119783-5119802 MS.gene78374:CDS 35.0%
TATGGGAAAACACCGTTTAA+GGG - chr2.3:5119800-5119819 MS.gene78374:CDS 35.0%
TCTTGAACATCTTCATACCA+TGG - chr2.3:5119427-5119446 MS.gene78374:CDS 35.0%
TGGAGGAGCTAATGAAATTA+AGG - chr2.3:5119952-5119971 MS.gene78374:CDS 35.0%
TTAAGCTACGAGATGTTGTA+TGG - chr2.3:5119782-5119801 MS.gene78374:CDS 35.0%
TTGAAGAGATTAGGTTACGT+TGG - chr2.3:5119932-5119951 MS.gene78374:CDS 35.0%
! TTTGAAACGGCTCAGTTAAT+TGG - chr2.3:5119290-5119309 MS.gene78374:CDS 35.0%
!! AGAAGCTTGAATTTGTTGGA+AGG - chr2.3:5119861-5119880 MS.gene78374:CDS 35.0%
!! CCTTTGCCTAATATTTTGAG+TGG + chr2.3:5119101-5119120 None:intergenic 35.0%
!! GTTTTGTTGGATGAGGAAAA+CGG + chr2.3:5119135-5119154 None:intergenic 35.0%
!!! AAGGAGCATGAGTTTTTTAG+AGG - chr2.3:5119971-5119990 MS.gene78374:CDS 35.0%
!!! AGGAGCATGAGTTTTTTAGA+GGG - chr2.3:5119972-5119991 MS.gene78374:CDS 35.0%
AAAATGGGAAATGTTGACGG+AGG - chr2.3:5119997-5120016 MS.gene78374:CDS 40.0%
AAATAACCGTCATCTCTCGA+CGG + chr2.3:5120043-5120062 None:intergenic 40.0%
AAATGTTGACGGAGGTTGTA+CGG - chr2.3:5120005-5120024 MS.gene78374:CDS 40.0%
AAGAGATTAGGTTACGTTGG+AGG - chr2.3:5119935-5119954 MS.gene78374:CDS 40.0%
ATGGGAAAACACCGTTTAAG+GGG - chr2.3:5119801-5119820 MS.gene78374:CDS 40.0%
GAGGAATGGATGTGATAAAG+TGG + chr2.3:5119252-5119271 None:intergenic 40.0%
GATGGAGAATTCCACTCAAT+CGG - chr2.3:5119612-5119631 MS.gene78374:CDS 40.0%
GTATGGGAAAACACCGTTTA+AGG - chr2.3:5119799-5119818 MS.gene78374:CDS 40.0%
TCATCTCTCGACGGAATAAA+CGG + chr2.3:5120034-5120053 None:intergenic 40.0%
TCTTGTGTACTAGGTGATGT+TGG + chr2.3:5119056-5119075 None:intergenic 40.0%
TGGAAGGAAAACAGCGTTAA+CGG - chr2.3:5119877-5119896 MS.gene78374:CDS 40.0%
TTTATTCCGTCGAGAGATGA+CGG - chr2.3:5120034-5120053 MS.gene78374:CDS 40.0%
! AGGTTAAGGTCTTGTGTACT+AGG + chr2.3:5119065-5119084 None:intergenic 40.0%
! GAGAGATGACGGTTATTTGA+CGG - chr2.3:5120045-5120064 MS.gene78374:CDS 40.0%
! GAGTTTTACGTTGAGATTCG+TGG + chr2.3:5119589-5119608 None:intergenic 40.0%
! GTTTGAGGTTGTTGAGGTTA+AGG + chr2.3:5119079-5119098 None:intergenic 40.0%
! TTGCTGTTGTTGAGAAGACA+CGG + chr2.3:5119376-5119395 None:intergenic 40.0%
!! CGTTAACGGATTTGATCGAA+CGG - chr2.3:5119891-5119910 MS.gene78374:CDS 40.0%
!!! CGTTGTTGTTTTGTTGGATG+AGG + chr2.3:5119142-5119161 None:intergenic 40.0%
!!! GGAGCATGAGTTTTTTAGAG+GGG - chr2.3:5119973-5119992 MS.gene78374:CDS 40.0%
AAACGGCTCAGTTAATTGGC+TGG - chr2.3:5119294-5119313 MS.gene78374:CDS 45.0%
AACGGCTCAGTTAATTGGCT+GGG - chr2.3:5119295-5119314 MS.gene78374:CDS 45.0%
AACTACTTTGAGTGCCATGG+TGG + chr2.3:5119171-5119190 None:intergenic 45.0%
ACCTCCTGAGCAATATGGAA+CGG + chr2.3:5119321-5119340 None:intergenic 45.0%
ACTCAATCGGCGAATTAGTC+CGG - chr2.3:5119625-5119644 MS.gene78374:CDS 45.0%
AGATCACCTCCTGAGCAATA+TGG + chr2.3:5119326-5119345 None:intergenic 45.0%
CAACAACGTTAACACCACCA+TGG - chr2.3:5119154-5119173 MS.gene78374:CDS 45.0%
CGAAATCAGTTAACGTGACG+TGG + chr2.3:5119505-5119524 None:intergenic 45.0%
CTATCCTCAAACTCAGACGA+CGG + chr2.3:5120148-5120167 None:intergenic 45.0%
GATCGAACGGTTGTTAGAGA+AGG - chr2.3:5119904-5119923 MS.gene78374:CDS 45.0%
GTCAACTACTTTGAGTGCCA+TGG + chr2.3:5119174-5119193 None:intergenic 45.0%
GTGGATTCTGCTATCTTCGA+CGG + chr2.3:5119570-5119589 None:intergenic 45.0%
TATTTGACGGCGGAGGAATT+CGG - chr2.3:5120058-5120077 MS.gene78374:CDS 45.0%
! AGATGACGGTTATTTGACGG+CGG - chr2.3:5120048-5120067 MS.gene78374:CDS 45.0%
! CATCCTGGGCAACTTTGAAA+CGG - chr2.3:5119277-5119296 MS.gene78374:CDS 45.0%
! CGAGTTAGACTTTTCACCGT+CGG + chr2.3:5119675-5119694 None:intergenic 45.0%
! TGAGTGGTTTGAGGTTGTTG+AGG + chr2.3:5119085-5119104 None:intergenic 45.0%
!! GCAGTTGATTTTTGGGCTCT+TGG - chr2.3:5119755-5119774 MS.gene78374:CDS 45.0%
AGAAGACACGGTCCGTTTGT+TGG + chr2.3:5119364-5119383 None:intergenic 50.0%
CAAAGTTGCCCAGGATGGAT+GGG + chr2.3:5119274-5119293 None:intergenic 50.0%
CGTTTCAAAGTTGCCCAGGA+TGG + chr2.3:5119279-5119298 None:intergenic 50.0%
CTCAACGTAAAACTCGGCGA+TGG - chr2.3:5119594-5119613 MS.gene78374:CDS 50.0%
GTCACGATAAGCTATGCCCA+TGG + chr2.3:5119447-5119466 None:intergenic 50.0%
TCAAAGTTGCCCAGGATGGA+TGG + chr2.3:5119275-5119294 None:intergenic 50.0%
TCTCTCGACGGAATAAACGG+TGG + chr2.3:5120031-5120050 None:intergenic 50.0%
TGCGCTCCGTTACCAACAAA+CGG - chr2.3:5119349-5119368 MS.gene78374:CDS 50.0%
! CACGGTCCGTTTGTTGGTAA+CGG + chr2.3:5119358-5119377 None:intergenic 50.0%
! CGTGGATTGAGTTTCTCCGA+CGG - chr2.3:5119656-5119675 MS.gene78374:CDS 50.0%
! GGACTAATTCGCCGATTGAG+TGG + chr2.3:5119626-5119645 None:intergenic 50.0%
ATTAGTCCGGTGAGTCGTCG+TGG - chr2.3:5119638-5119657 MS.gene78374:CDS 55.0%
CCATTCCTCCCATCCATCCT+GGG - chr2.3:5119263-5119282 MS.gene78374:CDS 55.0%
CTCAATCCACGACGACTCAC+CGG + chr2.3:5119647-5119666 None:intergenic 55.0%
GAGCCGTTTCAAAGTTGCCC+AGG + chr2.3:5119283-5119302 None:intergenic 55.0%
GCCGTTCCATATTGCTCAGG+AGG - chr2.3:5119317-5119336 MS.gene78374:CDS 55.0%
GTCACCGTCGTCTGAGTTTG+AGG - chr2.3:5120141-5120160 MS.gene78374:CDS 55.0%
TCAGACGACGGTGACCGTAA+CGG + chr2.3:5120136-5120155 None:intergenic 55.0%
TCCATTCCTCCCATCCATCC+TGG - chr2.3:5119262-5119281 MS.gene78374:CDS 55.0%
TGACGGTTATTTGACGGCGG+AGG - chr2.3:5120051-5120070 MS.gene78374:CDS 55.0%
TGGGCCGTTCCATATTGCTC+AGG - chr2.3:5119314-5119333 MS.gene78374:CDS 55.0%
AGTTGCCCAGGATGGATGGG+AGG + chr2.3:5119271-5119290 None:intergenic 60.0%
CCCAGGATGGATGGGAGGAA+TGG + chr2.3:5119266-5119285 None:intergenic 60.0%
CGAATTCATGTCCGTCGCCG+CGG + chr2.3:5119736-5119755 None:intergenic 60.0%
CTCCCAACGTGCTCGACGTT+CGG + chr2.3:5119216-5119235 None:intergenic 60.0%
TTGACGGCGGAGGAATTCGG+TGG - chr2.3:5120061-5120080 MS.gene78374:CDS 60.0%
ACGCCGAACGTCGAGCACGT+TGG - chr2.3:5119210-5119229 MS.gene78374:CDS 65.0%
ACGTTCGGCGTCGTGTGTGG+AGG + chr2.3:5119201-5119220 None:intergenic 65.0%
CACAGCAGAGTACGTCGCCC+CGG - chr2.3:5119703-5119722 MS.gene78374:CDS 65.0%
CCGGAAGTAATCCGCGGCGA+CGG - chr2.3:5119722-5119741 MS.gene78374:CDS 65.0%
CGCCGAACGTCGAGCACGTT+GGG - chr2.3:5119211-5119230 MS.gene78374:CDS 65.0%
GACCGTAACGGCGACGACGA+CGG + chr2.3:5120124-5120143 None:intergenic 65.0%
GTCGCCCCGGAAGTAATCCG+CGG - chr2.3:5119716-5119735 MS.gene78374:CDS 65.0%
TCGACGTTCGGCGTCGTGTG+TGG + chr2.3:5119204-5119223 None:intergenic 65.0%
TGCCGTCGTCGTCGCCGTTA+CGG - chr2.3:5120119-5120138 MS.gene78374:CDS 65.0%
! CCGTCGCCGCGGATTACTTC+CGG + chr2.3:5119725-5119744 None:intergenic 65.0%
! CGTCGCCGCGGATTACTTCC+GGG + chr2.3:5119724-5119743 None:intergenic 65.0%
! GGCGGAGGAATTCGGTGGAG+TGG - chr2.3:5120066-5120085 MS.gene78374:CDS 65.0%
! GTCGCCGCGGATTACTTCCG+GGG + chr2.3:5119723-5119742 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 5119044 5120189 5119044 ID=MS.gene78374
chr2.3 mRNA 5119044 5120189 5119044 ID=MS.gene78374.t1;Parent=MS.gene78374
chr2.3 exon 5119044 5120189 5119044 ID=MS.gene78374.t1.exon1;Parent=MS.gene78374.t1
chr2.3 CDS 5119044 5120189 5119044 ID=cds.MS.gene78374.t1;Parent=MS.gene78374.t1
Gene Sequence

>MS.gene78374

ATGGATTCACCAACATCACCTAGTACACAAGACCTTAACCTCAACAACCTCAAACCACTCAAAATATTAGGCAAAGGAGCAATGGGAACCGTTTTCCTCATCCAACAAAACAACAACGTTAACACCACCATGGCACTCAAAGTAGTTGACAAATCCTCCACACACGACGCCGAACGTCGAGCACGTTGGGAGATCGACGTCTTATCCACTTTATCACATCCATTCCTCCCATCCATCCTGGGCAACTTTGAAACGGCTCAGTTAATTGGCTGGGCCGTTCCATATTGCTCAGGAGGTGATCTGAATGCGCTCCGTTACCAACAAACGGACCGTGTCTTCTCAACAACAGCAATCCGTTTCTACATAGCAGAGATTCTCTGCGCTCTTGAACATCTTCATACCATGGGCATAGCTTATCGTGACCTTAAACCAGAAAACGTTCTTATTCAACAATCTGGCCACGTCACGTTAACTGATTTCGATCTCTCACGTAAACTTTCACACAAAACGGTTAGAACTTTAACCGTCGAAGATAGCAGAATCCACGAATCTCAACGTAAAACTCGGCGATGGAGAATTCCACTCAATCGGCGAATTAGTCCGGTGAGTCGTCGTGGATTGAGTTTCTCCGACGGTGAAAAGTCTAACTCGTTTGTTGGCACAGCAGAGTACGTCGCCCCGGAAGTAATCCGCGGCGACGGACATGAATTCGCAGTTGATTTTTGGGCTCTTGGAATTTTAAGCTACGAGATGTTGTATGGGAAAACACCGTTTAAGGGGAAGAATAAGAAAGAAACTTTTTCAAACGTGCTTTTCAAGAAGCTTGAATTTGTTGGAAGGAAAACAGCGTTAACGGATTTGATCGAACGGTTGTTAGAGAAGGATCCATTGAAGAGATTAGGTTACGTTGGAGGAGCTAATGAAATTAAGGAGCATGAGTTTTTTAGAGGGGTAAAATGGGAAATGTTGACGGAGGTTGTACGGCCACCGTTTATTCCGTCGAGAGATGACGGTTATTTGACGGCGGAGGAATTCGGTGGAGTGGATATAAGTGATTATTTCGATAAGCTGAAATTGCCGTCGTCGTCGCCGTTACGGTCACCGTCGTCTGAGTTTGAGGATAGCGTTTCATTTGATGAGTTCTGA
Protein sequence

>MS.gene78374.t1

MDSPTSPSTQDLNLNNLKPLKILGKGAMGTVFLIQQNNNVNTTMALKVVDKSSTHDAERRARWEIDVLSTLSHPFLPSILGNFETAQLIGWAVPYCSGGDLNALRYQQTDRVFSTTAIRFYIAEILCALEHLHTMGIAYRDLKPENVLIQQSGHVTLTDFDLSRKLSHKTVRTLTVEDSRIHESQRKTRRWRIPLNRRISPVSRRGLSFSDGEKSNSFVGTAEYVAPEVIRGDGHEFAVDFWALGILSYEMLYGKTPFKGKNKKETFSNVLFKKLEFVGRKTALTDLIERLLEKDPLKRLGYVGGANEIKEHEFFRGVKWEMLTEVVRPPFIPSRDDGYLTAEEFGGVDISDYFDKLKLPSSSPLRSPSSEFEDSVSFDEF