Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78581.t1 | XP_003626259.1 | 97 | 428 | 13 | 0 | 1 | 428 | 6 | 433 | 2.80E-234 | 820.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78581.t1 | Q3E6S8 | 61.9 | 425 | 143 | 6 | 8 | 425 | 14 | 426 | 1.2e-140 | 501.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78581.t1 | A2Q336 | 97.0 | 428 | 13 | 0 | 1 | 428 | 6 | 433 | 2.1e-234 | 820.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene78581 | MS.gene036453 | PPI |
| MS.gene67376 | MS.gene78581 | PPI |
| MS.gene78581 | MS.gene021049 | PPI |
| MS.gene004101 | MS.gene78581 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78581.t1 | MTR_7g113170 | 96.963 | 428 | 13 | 0 | 1 | 428 | 6 | 433 | 0.0 | 838 |
| MS.gene78581.t1 | MTR_7g113170 | 96.936 | 359 | 11 | 0 | 1 | 359 | 6 | 364 | 0.0 | 705 |
| MS.gene78581.t1 | MTR_6g007030 | 30.293 | 307 | 170 | 10 | 123 | 408 | 128 | 411 | 5.44e-32 | 126 |
| MS.gene78581.t1 | MTR_6g011810 | 28.571 | 308 | 182 | 10 | 142 | 425 | 165 | 458 | 2.90e-30 | 122 |
| MS.gene78581.t1 | MTR_2g019140 | 35.519 | 183 | 108 | 5 | 142 | 315 | 133 | 314 | 2.58e-22 | 97.4 |
| MS.gene78581.t1 | MTR_5g464730 | 29.740 | 269 | 145 | 7 | 173 | 411 | 93 | 347 | 1.40e-20 | 93.2 |
| MS.gene78581.t1 | MTR_5g064160 | 27.143 | 280 | 159 | 7 | 162 | 410 | 137 | 402 | 2.49e-19 | 90.1 |
| MS.gene78581.t1 | MTR_5g064160 | 27.046 | 281 | 160 | 7 | 162 | 411 | 102 | 368 | 2.55e-19 | 89.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78581.t1 | AT5G27660 | 62.824 | 425 | 145 | 5 | 8 | 425 | 14 | 432 | 0.0 | 525 |
| MS.gene78581.t1 | AT5G27660 | 61.882 | 425 | 143 | 6 | 8 | 425 | 9 | 421 | 1.12e-180 | 510 |
| MS.gene78581.t1 | AT3G27925 | 31.193 | 327 | 178 | 11 | 123 | 424 | 135 | 439 | 1.34e-33 | 131 |
| MS.gene78581.t1 | AT3G27925 | 31.193 | 327 | 178 | 11 | 123 | 424 | 135 | 439 | 1.34e-33 | 131 |
| MS.gene78581.t1 | AT5G39830 | 29.545 | 308 | 179 | 10 | 142 | 425 | 155 | 448 | 2.52e-31 | 125 |
| MS.gene78581.t1 | AT5G39830 | 28.525 | 305 | 172 | 10 | 142 | 425 | 155 | 434 | 7.82e-27 | 112 |
| MS.gene78581.t1 | AT4G18370 | 36.458 | 192 | 110 | 6 | 142 | 323 | 131 | 320 | 1.85e-21 | 95.1 |
Find 126 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATTCCCTAATGTCAATA+AGG | 0.269170 | 7.4:-3548985 | MS.gene78581:CDS |
| TGTATGGCACAGGGAAATTC+TGG | 0.299439 | 7.4:-3549510 | MS.gene78581:intron |
| TCCTTCTTCGGACATGTCTA+AGG | 0.309122 | 7.4:-3551569 | MS.gene78581:CDS |
| TGGAGGGCCACTTGTCAATA+TGG | 0.315113 | 7.4:-3549490 | MS.gene78581:CDS |
| CTAGGCTTCGTCCCGGGGAT+TGG | 0.328014 | 7.4:-3549934 | MS.gene78581:CDS |
| TGACCGTAAAAGCAGTGATT+TGG | 0.333135 | 7.4:-3549685 | MS.gene78581:CDS |
| TGCGACTTTAACTGTGATTC+CGG | 0.336668 | 7.4:-3547625 | MS.gene78581:CDS |
| AGAATGCCCTTATTGACATT+AGG | 0.346180 | 7.4:+3548978 | None:intergenic |
| GGGTCCCCTGGTGATCGTGC+TGG | 0.357975 | 7.4:-3548114 | MS.gene78581:CDS |
| GAATGCCCTTATTGACATTA+GGG | 0.359755 | 7.4:+3548979 | None:intergenic |
| AAGCCATCTAAGGATACTTT+TGG | 0.364970 | 7.4:-3551517 | MS.gene78581:CDS |
| GACCGTAAAAGCAGTGATTT+GGG | 0.371160 | 7.4:-3549684 | MS.gene78581:CDS |
| GACATGTCTAAGGAAACTTC+TGG | 0.371904 | 7.4:-3551559 | MS.gene78581:CDS |
| ATCTGTTTGTAAATACTCTC+TGG | 0.378364 | 7.4:+3549647 | None:intergenic |
| TGATGAATCAAAGCCATCTA+AGG | 0.379781 | 7.4:-3551527 | MS.gene78581:CDS |
| AGCAGTGATTTGGGATTTAG+TGG | 0.380979 | 7.4:-3549675 | MS.gene78581:CDS |
| GATGTTGTCATTGAATTTGA+TGG | 0.389841 | 7.4:-3548078 | MS.gene78581:CDS |
| AGTTAGCCCTGTTCCTTCTT+CGG | 0.392277 | 7.4:-3551581 | MS.gene78581:CDS |
| TTGAACACAAACCTTCCCTT+TGG | 0.396372 | 7.4:+3551222 | None:intergenic |
| AAATGATGGTGGACAAAGTT+GGG | 0.397529 | 7.4:-3547689 | MS.gene78581:CDS |
| TAGGCTTCGTCCCGGGGATT+GGG | 0.404252 | 7.4:-3549933 | MS.gene78581:CDS |
| CAAAGCTTGGTTCTTCAACT+AGG | 0.415056 | 7.4:-3549952 | MS.gene78581:CDS |
| CCAAGCTTTGCTTCCGGAAG+TGG | 0.420101 | 7.4:+3549965 | None:intergenic |
| AAATTCTGAAACCCCACTTC+CGG | 0.423531 | 7.4:-3549978 | MS.gene78581:CDS |
| CAAGATGGAAGGACATTTGA+GGG | 0.423591 | 7.4:-3550049 | MS.gene78581:CDS |
| CTTCAACTAGGCTTCGTCCC+GGG | 0.427401 | 7.4:-3549940 | MS.gene78581:CDS |
| CGGAACCCAGCACGATCACC+AGG | 0.431496 | 7.4:+3548108 | None:intergenic |
| TGCCATTGCAAGATATATCA+TGG | 0.437451 | 7.4:-3551795 | MS.gene78581:CDS |
| CTACCAAAAGTATCCTTAGA+TGG | 0.439534 | 7.4:+3551514 | None:intergenic |
| TCATTCCCTAATGTCAATAA+GGG | 0.444524 | 7.4:-3548984 | MS.gene78581:CDS |
| GGAATCCAATCTCAGCTTGT+AGG | 0.450834 | 7.4:-3547601 | None:intergenic |
| AGTCTCCTACAAGCTGAGAT+TGG | 0.457251 | 7.4:+3547596 | None:intergenic |
| GGTCCCCTGGTGATCGTGCT+GGG | 0.461837 | 7.4:-3548113 | MS.gene78581:CDS |
| ACTGGAATTAGTGTGGTTAT+CGG | 0.462039 | 7.4:+3552105 | None:intergenic |
| ACATGTCTAAGGAAACTTCT+GGG | 0.469601 | 7.4:-3551558 | MS.gene78581:CDS |
| GAAGAACCAAGCTTTGCTTC+CGG | 0.472595 | 7.4:+3549959 | None:intergenic |
| GTGGACGTAACAAATCAAAC+GGG | 0.472824 | 7.4:+3551758 | None:intergenic |
| TTTGCTACAGGGAAGAGTAT+TGG | 0.475530 | 7.4:-3551328 | MS.gene78581:CDS |
| GTTGCAGGTTATTGAAATGA+TGG | 0.475950 | 7.4:-3547703 | MS.gene78581:intron |
| TAGGTAACTCCTGGGTCCCC+TGG | 0.475953 | 7.4:-3548126 | MS.gene78581:CDS |
| AGTGTTGGCTGCTGATGGGT+TGG | 0.476294 | 7.4:-3549436 | MS.gene78581:CDS |
| TCCTTAGACATGTCCGAAGA+AGG | 0.477491 | 7.4:+3551568 | None:intergenic |
| ATAGAGCATTTCAAGAAAAG+TGG | 0.478194 | 7.4:-3549378 | MS.gene78581:CDS |
| TGTGGACGTAACAAATCAAA+CGG | 0.478244 | 7.4:+3551757 | None:intergenic |
| GTGTTGGCTGCTGATGGGTT+GGG | 0.482417 | 7.4:-3549435 | MS.gene78581:CDS |
| GACATGTCCGAAGAAGGAAC+AGG | 0.489693 | 7.4:+3551574 | None:intergenic |
| TACCTCCTTCATGCTTTCCA+CGG | 0.491263 | 7.4:+3548050 | None:intergenic |
| CAAGCTTTGCTTCCGGAAGT+GGG | 0.491393 | 7.4:+3549966 | None:intergenic |
| AGCTCTGCCGTTGGAGCTGT+GGG | 0.496151 | 7.4:-3552160 | MS.gene78581:CDS |
| GATCGTGCTGGGTTCCGTCC+TGG | 0.498642 | 7.4:-3548102 | MS.gene78581:CDS |
| GCAAGATGGAAGGACATTTG+AGG | 0.500220 | 7.4:-3550050 | MS.gene78581:CDS |
| ATTGAAGTCACTTTGCAAGA+TGG | 0.504105 | 7.4:-3550064 | MS.gene78581:CDS |
| CGGGGATTGGGTAATAGCCA+TGG | 0.506433 | 7.4:-3549921 | MS.gene78581:CDS |
| ATCGAAATATTAACAACAGC+AGG | 0.506520 | 7.4:+3551457 | None:intergenic |
| CCACTTCCGGAAGCAAAGCT+TGG | 0.510741 | 7.4:-3549965 | MS.gene78581:CDS |
| AAGGACATTTGAGGGGAAAG+TGG | 0.512120 | 7.4:-3550041 | MS.gene78581:CDS |
| AGAGTGATACGGCCATGGCT+TGG | 0.514213 | 7.4:-3549065 | MS.gene78581:CDS |
| GGAACAATCATTAACAAAGA+TGG | 0.515974 | 7.4:-3551301 | MS.gene78581:CDS |
| ATGAAAGTGTTGGCTGCTGA+TGG | 0.519245 | 7.4:-3549441 | MS.gene78581:CDS |
| TTCAACTAGGCTTCGTCCCG+GGG | 0.519860 | 7.4:-3549939 | MS.gene78581:CDS |
| AAGCTCTGCCGTTGGAGCTG+TGG | 0.521174 | 7.4:-3552161 | MS.gene78581:CDS |
| GCAAATGCTGCTGCTAAAGT+TGG | 0.521599 | 7.4:-3551481 | MS.gene78581:CDS |
| GAAATGATGGTGGACAAAGT+TGG | 0.526009 | 7.4:-3547690 | MS.gene78581:CDS |
| ACCTCCTTCATGCTTTCCAC+GGG | 0.531605 | 7.4:+3548051 | None:intergenic |
| GCACAAAAGGTTCATCCAAA+GGG | 0.534147 | 7.4:-3551237 | MS.gene78581:CDS |
| CATGAAAATCAACGACAACA+TGG | 0.539853 | 7.4:+3551260 | None:intergenic |
| TCTTCAACTAGGCTTCGTCC+CGG | 0.539957 | 7.4:-3549941 | MS.gene78581:CDS |
| TCAGGAGAGTGATACGGCCA+TGG | 0.540162 | 7.4:-3549070 | MS.gene78581:intron |
| ACAGGGAAGAGTATTGGCTC+TGG | 0.541432 | 7.4:-3551322 | MS.gene78581:CDS |
| CTGTCACTGCTGGTATTGTA+AGG | 0.545354 | 7.4:-3549874 | MS.gene78581:intron |
| CATGGCTATTACCCAATCCC+CGG | 0.547015 | 7.4:+3549922 | None:intergenic |
| AAGGGAATGCGGACAACCCA+TGG | 0.551296 | 7.4:+3549904 | None:intergenic |
| GGCACAAAAGGTTCATCCAA+AGG | 0.554675 | 7.4:-3551238 | MS.gene78581:CDS |
| TAAGGGCATTCTTGTACCAA+TGG | 0.554993 | 7.4:-3548967 | MS.gene78581:intron |
| TTGAACAGAAGCTCTGCCGT+TGG | 0.555512 | 7.4:-3552169 | MS.gene78581:CDS |
| GGGCCACTTGTCAATATGGA+TGG | 0.558327 | 7.4:-3549486 | MS.gene78581:CDS |
| CTTCAGAATACTGTCACTGC+TGG | 0.562372 | 7.4:-3549884 | MS.gene78581:CDS |
| TAGAGCATTTCAAGAAAAGT+GGG | 0.563537 | 7.4:-3549377 | MS.gene78581:intron |
| ACACACAGAGTCGATTGGTA+CGG | 0.565045 | 7.4:+3549407 | None:intergenic |
| AGATATATCATGGTTGACAT+TGG | 0.565755 | 7.4:-3551785 | MS.gene78581:CDS |
| AACCATGATATATCTTGCAA+TGG | 0.566757 | 7.4:+3551793 | None:intergenic |
| GATATATCTTGCAATGGCAA+AGG | 0.570631 | 7.4:+3551799 | None:intergenic |
| CAGCAGTGACAGTATTCTGA+AGG | 0.571751 | 7.4:+3549885 | None:intergenic |
| TAGGAACGTTCGTACGTGTG+CGG | 0.573882 | 7.4:-3551825 | MS.gene78581:CDS |
| AATATGGATGGAGAAATTGT+TGG | 0.576439 | 7.4:-3549474 | MS.gene78581:CDS |
| TCTGTTTGTAAATACTCTCT+GGG | 0.577942 | 7.4:+3549648 | None:intergenic |
| AACGATACCCACAGCTCCAA+CGG | 0.578717 | 7.4:+3552153 | None:intergenic |
| GCTGTGGGTATCGTTGCTGT+TGG | 0.578767 | 7.4:-3552145 | MS.gene78581:CDS |
| AAGCTGAGATTGGATTCCTC+CGG | 0.580230 | 7.4:+3547606 | None:intergenic |
| AAGTCACTTTGCAAGATGGA+AGG | 0.582092 | 7.4:-3550060 | MS.gene78581:CDS |
| GGGGATTGGGTAATAGCCAT+GGG | 0.587526 | 7.4:-3549920 | MS.gene78581:CDS |
| ATGAAAATCAACGACAACAT+GGG | 0.587711 | 7.4:+3551261 | None:intergenic |
| AAAAGGTTCATCCAAAGGGA+AGG | 0.590674 | 7.4:-3551233 | MS.gene78581:intron |
| ATGGCTATTACCCAATCCCC+GGG | 0.595774 | 7.4:+3549923 | None:intergenic |
| TGAAAGTGTTGGCTGCTGAT+GGG | 0.600081 | 7.4:-3549440 | MS.gene78581:CDS |
| GAACCCAGCACGATCACCAG+GGG | 0.600193 | 7.4:+3548110 | None:intergenic |
| GCACGATCACCAGGGGACCC+AGG | 0.601429 | 7.4:+3548117 | None:intergenic |
| ATTGCTCACTGGAATTAGTG+TGG | 0.602326 | 7.4:+3552098 | None:intergenic |
| TCTCCATCCATATTGACAAG+TGG | 0.603386 | 7.4:+3549483 | None:intergenic |
| CAAAGTTGGGGTGCCCATGA+AGG | 0.604534 | 7.4:-3547676 | MS.gene78581:CDS |
| AACAGATTGTGCAATTAATG+TGG | 0.605597 | 7.4:-3549631 | MS.gene78581:intron |
| CATGTCTAAGGAAACTTCTG+GGG | 0.608468 | 7.4:-3551557 | MS.gene78581:CDS |
| TGAATTTGATGGAAAGCCCG+TGG | 0.609844 | 7.4:-3548067 | MS.gene78581:CDS |
| TGGTCGAAAGACGACAAATG+TGG | 0.613228 | 7.4:+3551739 | None:intergenic |
| AAAGCCCGTGGAAAGCATGA+AGG | 0.616163 | 7.4:-3548055 | MS.gene78581:CDS |
| AAGCTTTGCTTCCGGAAGTG+GGG | 0.621714 | 7.4:+3549967 | None:intergenic |
| TTGTCGTCTTTCGACCAACA+TGG | 0.625198 | 7.4:-3551733 | MS.gene78581:intron |
| AATTCAATGACAACATCACC+AGG | 0.627515 | 7.4:+3548084 | None:intergenic |
| AGCATTCTTAGTCCAAGCCA+TGG | 0.630955 | 7.4:+3549053 | None:intergenic |
| AGCAGTGACAGTATTCTGAA+GGG | 0.641778 | 7.4:+3549886 | None:intergenic |
| GTTAATATTTCGATTCCACA+AGG | 0.645580 | 7.4:-3551448 | MS.gene78581:intron |
| AGAAAGAGGACAAACCATGT+TGG | 0.646314 | 7.4:+3551719 | None:intergenic |
| GGAACCCAGCACGATCACCA+GGG | 0.647337 | 7.4:+3548109 | None:intergenic |
| GACTTTAACTGTGATTCCGG+AGG | 0.651382 | 7.4:-3547622 | MS.gene78581:CDS |
| ACAGTATTCTGAAGGGAATG+CGG | 0.654266 | 7.4:+3549893 | None:intergenic |
| ATGGCACAGGGAAATTCTGG+AGG | 0.659592 | 7.4:-3549507 | MS.gene78581:intron |
| CAATGACAACATCACCAGGA+CGG | 0.663393 | 7.4:+3548088 | None:intergenic |
| GCCCGTGGAAAGCATGAAGG+AGG | 0.665398 | 7.4:-3548052 | MS.gene78581:intron |
| GCAGGTTATTGAAATGATGG+TGG | 0.673889 | 7.4:-3547700 | MS.gene78581:intron |
| AGTGAACATCATGAAAGTGT+TGG | 0.676552 | 7.4:-3549451 | MS.gene78581:CDS |
| ACATGTCCGAAGAAGGAACA+GGG | 0.682454 | 7.4:+3551575 | None:intergenic |
| TGGCACAGGGAAATTCTGGA+GGG | 0.686679 | 7.4:-3549506 | MS.gene78581:intron |
| AAGATGGAAGGACATTTGAG+GGG | 0.693003 | 7.4:-3550048 | MS.gene78581:CDS |
| AATGATGGTGGACAAAGTTG+GGG | 0.709009 | 7.4:-3547688 | MS.gene78581:CDS |
| ATGTCTAAGGAAACTTCTGG+GGG | 0.710738 | 7.4:-3551556 | MS.gene78581:CDS |
| TGGACGTAACAAATCAAACG+GGG | 0.745894 | 7.4:+3551759 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAAAGTAAAAGAAAAT+AGG | + | chr7.4:3549985-3550004 | None:intergenic | 10.0% |
| !!! | TTTTTTTATAACAATAACAA+CGG | - | chr7.4:3551396-3551415 | MS.gene78581:intron | 10.0% |
| !! | AAGATAAAATAAAATGATCT+GGG | - | chr7.4:3551824-3551843 | MS.gene78581:CDS | 15.0% |
| !! | TAAGATAAAATAAAATGATC+TGG | - | chr7.4:3551823-3551842 | MS.gene78581:CDS | 15.0% |
| !! | TAATCTTGAAATAAAGTTAA+TGG | - | chr7.4:3547737-3547756 | MS.gene78581:intron | 15.0% |
| !!! | TATTTTCAGAATAATTTTCT+AGG | + | chr7.4:3551165-3551184 | None:intergenic | 15.0% |
| !! | AAAATTACACAAAACATAAG+CGG | + | chr7.4:3551476-3551495 | None:intergenic | 20.0% |
| !! | AATAATCAATTCATCTAACA+TGG | - | chr7.4:3547929-3547948 | MS.gene78581:intron | 20.0% |
| !! | AGATAAAATAAAATGATCTG+GGG | - | chr7.4:3551825-3551844 | MS.gene78581:CDS | 20.0% |
| !! | CAAACTTATACTAATCTTTA+GGG | - | chr7.4:3551893-3551912 | MS.gene78581:intron | 20.0% |
| !! | GATCATAATATATCCATAAA+AGG | + | chr7.4:3550598-3550617 | None:intergenic | 20.0% |
| !! | TGTTAAATCTAACATTGAAA+TGG | + | chr7.4:3550011-3550030 | None:intergenic | 20.0% |
| !!! | AAATTTAAACGTTTTTGACT+AGG | - | chr7.4:3551641-3551660 | MS.gene78581:intron | 20.0% |
| !!! | AGTAAACTTTTTTTCTTTTC+AGG | - | chr7.4:3550698-3550717 | MS.gene78581:intron | 20.0% |
| !!! | ATTTAGAACTGAAAATTTGT+AGG | - | chr7.4:3548158-3548177 | MS.gene78581:intron | 20.0% |
| !!! | CTGATTTTTTAAATGTCTTT+TGG | - | chr7.4:3550035-3550054 | MS.gene78581:CDS | 20.0% |
| !!! | TTCATGTATTGTATGATTTT+TGG | - | chr7.4:3550067-3550086 | MS.gene78581:CDS | 20.0% |
| !!! | TTTAGAACTGAAAATTTGTA+GGG | - | chr7.4:3548159-3548178 | MS.gene78581:intron | 20.0% |
| ! | AATTCAATTGTTAGAGTGAT+AGG | + | chr7.4:3549215-3549234 | None:intergenic | 25.0% |
| ! | AGGATGTTAAGAAAGATAAA+GGG | + | chr7.4:3549313-3549332 | None:intergenic | 25.0% |
| ! | ATTACAAATCAAAGAGAAGA+TGG | - | chr7.4:3551284-3551303 | MS.gene78581:CDS | 25.0% |
| ! | CATAATGAAGAATAATCTCA+CGG | + | chr7.4:3552017-3552036 | None:intergenic | 25.0% |
| ! | CATCTAAAGATCGATTAATT+GGG | + | chr7.4:3550851-3550870 | None:intergenic | 25.0% |
| ! | CCAAACTTATACTAATCTTT+AGG | - | chr7.4:3551892-3551911 | MS.gene78581:intron | 25.0% |
| ! | CCTAAAGATTAGTATAAGTT+TGG | + | chr7.4:3551895-3551914 | None:intergenic | 25.0% |
| ! | GTCAATCAAAATTGTTTATG+CGG | + | chr7.4:3550620-3550639 | None:intergenic | 25.0% |
| ! | TATCATGTTACTATCATACT+TGG | - | chr7.4:3551107-3551126 | MS.gene78581:intron | 25.0% |
| ! | TATTAAAAGTGAATGTGGAA+AGG | + | chr7.4:3549247-3549266 | None:intergenic | 25.0% |
| ! | TCTTGATATTCTTATGTTGT+AGG | - | chr7.4:3549478-3549497 | MS.gene78581:CDS | 25.0% |
| ! | TGGTATATACTAACTAGTTA+TGG | + | chr7.4:3549092-3549111 | None:intergenic | 25.0% |
| ! | TGTAACTATCACAATTAGAT+AGG | + | chr7.4:3551362-3551381 | None:intergenic | 25.0% |
| ! | TTCAGATTGTCACATATAAA+CGG | + | chr7.4:3550519-3550538 | None:intergenic | 25.0% |
| ! | TTTGATCTATCAATAAGATG+AGG | + | chr7.4:3551190-3551209 | None:intergenic | 25.0% |
| !! | AAGAAATATATCTTGACTTG+TGG | + | chr7.4:3549112-3549131 | None:intergenic | 25.0% |
| !! | CTTACAATTTTCACCTTTTA+TGG | - | chr7.4:3550582-3550601 | MS.gene78581:intron | 25.0% |
| !! | TTGAGTCTTAAATGATTTTC+AGG | + | chr7.4:3549587-3549606 | None:intergenic | 25.0% |
| !! | TTGATTGACATACTTTTATG+TGG | - | chr7.4:3550631-3550650 | MS.gene78581:intron | 25.0% |
| !!! | ATTGGCTTTGTAGATTTTTA+TGG | - | chr7.4:3548434-3548453 | MS.gene78581:intron | 25.0% |
| !!! | ATTTTTATGGTTTTGCTACA+GGG | - | chr7.4:3548447-3548466 | MS.gene78581:intron | 25.0% |
| !!! | CCACATTCACTTTTAATAAT+GGG | - | chr7.4:3549249-3549268 | MS.gene78581:intron | 25.0% |
| !!! | TCCACATTCACTTTTAATAA+TGG | - | chr7.4:3549248-3549267 | MS.gene78581:intron | 25.0% |
| AACAGATTGTGCAATTAATG+TGG | - | chr7.4:3550155-3550174 | MS.gene78581:intron | 30.0% | |
| AACCATGATATATCTTGCAA+TGG | + | chr7.4:3547996-3548015 | None:intergenic | 30.0% | |
| AACGATTCATTCAGATGAAA+AGG | + | chr7.4:3548372-3548391 | None:intergenic | 30.0% | |
| AAGTGAACACAAAAACAAAG+AGG | - | chr7.4:3551208-3551227 | MS.gene78581:intron | 30.0% | |
| AATATGGATGGAGAAATTGT+TGG | - | chr7.4:3550312-3550331 | MS.gene78581:intron | 30.0% | |
| AATATTGACGATGCATACAA+AGG | - | chr7.4:3547893-3547912 | MS.gene78581:intron | 30.0% | |
| AATGTTGTCTAATCAGAAAG+AGG | + | chr7.4:3551432-3551451 | None:intergenic | 30.0% | |
| ACTTGTAATGAGCTTATGTA+TGG | + | chr7.4:3549368-3549387 | None:intergenic | 30.0% | |
| AGATATATCATGGTTGACAT+TGG | - | chr7.4:3548001-3548020 | MS.gene78581:intron | 30.0% | |
| AGATTTAGTTAATTGCTCAC+TGG | + | chr7.4:3547702-3547721 | None:intergenic | 30.0% | |
| ATAAACTACCCAAGTAGATA+TGG | - | chr7.4:3550204-3550223 | MS.gene78581:intron | 30.0% | |
| ATATAACTGTAGCTTGATAC+TGG | + | chr7.4:3548741-3548760 | None:intergenic | 30.0% | |
| ATATCAAGAACCAATTGTTC+TGG | + | chr7.4:3549467-3549486 | None:intergenic | 30.0% | |
| ATATTGAGAACCAATTGATC+CGG | + | chr7.4:3549525-3549544 | None:intergenic | 30.0% | |
| ATCCATATTCCATATCTACT+TGG | + | chr7.4:3550216-3550235 | None:intergenic | 30.0% | |
| ATCGAAATATTAACAACAGC+AGG | + | chr7.4:3548332-3548351 | None:intergenic | 30.0% | |
| ATCTGTTTGTAAATACTCTC+TGG | + | chr7.4:3550142-3550161 | None:intergenic | 30.0% | |
| ATGAAAATCAACGACAACAT+GGG | + | chr7.4:3548528-3548547 | None:intergenic | 30.0% | |
| ATGATAGTTTATCATGCTGT+AGG | - | chr7.4:3549392-3549411 | MS.gene78581:CDS | 30.0% | |
| ATTAATTGGGAACATACCAT+TGG | + | chr7.4:3550838-3550857 | None:intergenic | 30.0% | |
| CAAGATTAGAGAGAAAATTG+TGG | + | chr7.4:3549280-3549299 | None:intergenic | 30.0% | |
| CATAGATGTAAAATTGTTGC+AGG | - | chr7.4:3552068-3552087 | MS.gene78581:intron | 30.0% | |
| CCCATTATTAAAAGTGAATG+TGG | + | chr7.4:3549252-3549271 | None:intergenic | 30.0% | |
| CTACATGAGTTAGAATAAGA+CGG | - | chr7.4:3549064-3549083 | MS.gene78581:CDS | 30.0% | |
| CTAGGATTCTCACTTTAATA+GGG | + | chr7.4:3551147-3551166 | None:intergenic | 30.0% | |
| CTTGTAATGAGCTTATGTAT+GGG | + | chr7.4:3549367-3549386 | None:intergenic | 30.0% | |
| GAAAGAAAGTTCAACTGTTA+GGG | + | chr7.4:3549174-3549193 | None:intergenic | 30.0% | |
| GAAATAATGTGTTTGTCACA+AGG | - | chr7.4:3551618-3551637 | MS.gene78581:intron | 30.0% | |
| GAGGATGTTAAGAAAGATAA+AGG | + | chr7.4:3549314-3549333 | None:intergenic | 30.0% | |
| GATGTATTTGTGCAAAACTA+AGG | + | chr7.4:3548997-3549016 | None:intergenic | 30.0% | |
| GATGTTGTCATTGAATTTGA+TGG | - | chr7.4:3551708-3551727 | MS.gene78581:intron | 30.0% | |
| GCATCTAAAGATCGATTAAT+TGG | + | chr7.4:3550852-3550871 | None:intergenic | 30.0% | |
| GGAACAATCATTAACAAAGA+TGG | - | chr7.4:3548485-3548504 | MS.gene78581:intron | 30.0% | |
| GTAGATATGGAATATGGATT+TGG | - | chr7.4:3550217-3550236 | MS.gene78581:intron | 30.0% | |
| GTTAATATTTCGATTCCACA+AGG | - | chr7.4:3548338-3548357 | MS.gene78581:intron | 30.0% | |
| GTTACTATCATACTTGGATA+GGG | - | chr7.4:3551113-3551132 | MS.gene78581:intron | 30.0% | |
| TAAAAGTTCAAACCAGAAAG+AGG | + | chr7.4:3548084-3548103 | None:intergenic | 30.0% | |
| TATTATGTTAGTGAAGCCAT+GGG | - | chr7.4:3551057-3551076 | MS.gene78581:intron | 30.0% | |
| TCATTCCCTAATGTCAATAA+GGG | - | chr7.4:3550802-3550821 | MS.gene78581:intron | 30.0% | |
| TCCAAGCAGAAAGTTTAATT+AGG | - | chr7.4:3550553-3550572 | MS.gene78581:intron | 30.0% | |
| TCCATATTCCATATCTACTT+GGG | + | chr7.4:3550215-3550234 | None:intergenic | 30.0% | |
| TCTAACATGGCTTCAAATTT+AGG | - | chr7.4:3547942-3547961 | MS.gene78581:intron | 30.0% | |
| TCTGTTTGTAAATACTCTCT+GGG | + | chr7.4:3550141-3550160 | None:intergenic | 30.0% | |
| TGAAAGAAAGTTCAACTGTT+AGG | + | chr7.4:3549175-3549194 | None:intergenic | 30.0% | |
| TGGTTAATACTTGAGTAGTT+AGG | - | chr7.4:3550651-3550670 | MS.gene78581:intron | 30.0% | |
| TGTTACTATCATACTTGGAT+AGG | - | chr7.4:3551112-3551131 | MS.gene78581:intron | 30.0% | |
| TTATTATGTTAGTGAAGCCA+TGG | - | chr7.4:3551056-3551075 | MS.gene78581:intron | 30.0% | |
| TTCAAAGTTGTTTGCAAAGT+TGG | - | chr7.4:3550954-3550973 | MS.gene78581:intron | 30.0% | |
| TTCAAGACAGTGTACATATT+TGG | + | chr7.4:3548606-3548625 | None:intergenic | 30.0% | |
| TTCATTCCCTAATGTCAATA+AGG | - | chr7.4:3550801-3550820 | MS.gene78581:intron | 30.0% | |
| ! | ATAGAGCATTTCAAGAAAAG+TGG | - | chr7.4:3550408-3550427 | MS.gene78581:intron | 30.0% |
| ! | TAGAGCATTTCAAGAAAAGT+GGG | - | chr7.4:3550409-3550428 | MS.gene78581:intron | 30.0% |
| ! | TCTAGGATTCTCACTTTAAT+AGG | + | chr7.4:3551148-3551167 | None:intergenic | 30.0% |
| ! | TTAATGGCATGCTTTTCAAT+TGG | - | chr7.4:3547753-3547772 | MS.gene78581:intron | 30.0% |
| ! | TTTTCAGAATCTAGATTCAC+AGG | - | chr7.4:3550884-3550903 | MS.gene78581:intron | 30.0% |
| !! | CTTTTAACTACAACCTTCAT+GGG | + | chr7.4:3552126-3552145 | None:intergenic | 30.0% |
| !! | GATTTTTATGGTTTTGCTAC+AGG | - | chr7.4:3548446-3548465 | MS.gene78581:intron | 30.0% |
| !! | TCTTTTAACTACAACCTTCA+TGG | + | chr7.4:3552127-3552146 | None:intergenic | 30.0% |
| !!! | TCGATTTTTTTTACTGTCTG+TGG | + | chr7.4:3551994-3552013 | None:intergenic | 30.0% |
| AAAAGTGAATGTGGAAAGGA+AGG | + | chr7.4:3549243-3549262 | None:intergenic | 35.0% | |
| AAGAAAAGTGGGTATGTTTC+TGG | - | chr7.4:3550420-3550439 | MS.gene78581:intron | 35.0% | |
| AATTCAATGACAACATCACC+AGG | + | chr7.4:3551705-3551724 | None:intergenic | 35.0% | |
| ACATGTCTAAGGAAACTTCT+GGG | - | chr7.4:3548228-3548247 | MS.gene78581:intron | 35.0% | |
| ACCCAAGTAGATATGGAATA+TGG | - | chr7.4:3550211-3550230 | MS.gene78581:intron | 35.0% | |
| ACTGGAATTAGTGTGGTTAT+CGG | + | chr7.4:3547684-3547703 | None:intergenic | 35.0% | |
| ACTGTAACAACCAAACCTTT+AGG | - | chr7.4:3549032-3549051 | MS.gene78581:CDS | 35.0% | |
| AGAATGCCCTTATTGACATT+AGG | + | chr7.4:3550811-3550830 | None:intergenic | 35.0% | |
| AGTTCAACTGTTAGGGTAAA+AGG | + | chr7.4:3549167-3549186 | None:intergenic | 35.0% | |
| AGTTCTCTGTGATGTAAATG+TGG | - | chr7.4:3548658-3548677 | MS.gene78581:intron | 35.0% | |
| ATAGTAGCTCATTTAGCTGT+AGG | - | chr7.4:3549421-3549440 | MS.gene78581:CDS | 35.0% | |
| ATCTACTTGGGTAGTTTATG+CGG | + | chr7.4:3550203-3550222 | None:intergenic | 35.0% | |
| CACATACATCTAAACATGCA+TGG | + | chr7.4:3548134-3548153 | None:intergenic | 35.0% | |
| CATGAAAATCAACGACAACA+TGG | + | chr7.4:3548529-3548548 | None:intergenic | 35.0% | |
| CTAATCAGAAAGAGGAGTAA+GGG | + | chr7.4:3551424-3551443 | None:intergenic | 35.0% | |
| CTTTGTATGACTCAAAGCTA+GGG | - | chr7.4:3548817-3548836 | MS.gene78581:intron | 35.0% | |
| GAAAAGGTAGAAAAACCTTG+TGG | + | chr7.4:3548356-3548375 | None:intergenic | 35.0% | |
| GAAGGTTTGTGTTCAAGAAA+GGG | - | chr7.4:3548571-3548590 | MS.gene78581:intron | 35.0% | |
| GAATGCCCTTATTGACATTA+GGG | + | chr7.4:3550810-3550829 | None:intergenic | 35.0% | |
| GAGCAACACAATGCATATTA+TGG | + | chr7.4:3551571-3551590 | None:intergenic | 35.0% | |
| GATATATCTTGCAATGGCAA+AGG | + | chr7.4:3547990-3548009 | None:intergenic | 35.0% | |
| GATCCATTCCCAACAAAATA+GGG | - | chr7.4:3548898-3548917 | MS.gene78581:intron | 35.0% | |
| GCCTAATTAAACTTTCTGCT+TGG | + | chr7.4:3550557-3550576 | None:intergenic | 35.0% | |
| GCTAAATGAGCTACTATACA+AGG | + | chr7.4:3549418-3549437 | None:intergenic | 35.0% | |
| GTACTTTCTGAGTCATGATT+TGG | - | chr7.4:3548866-3548885 | MS.gene78581:intron | 35.0% | |
| GTTGCAGGTTATTGAAATGA+TGG | - | chr7.4:3552083-3552102 | MS.gene78581:intron | 35.0% | |
| TAATCAGAAAGAGGAGTAAG+GGG | + | chr7.4:3551423-3551442 | None:intergenic | 35.0% | |
| TACACAAAACATAAGCGGAA+TGG | + | chr7.4:3551471-3551490 | None:intergenic | 35.0% | |
| TCTAATCAGAAAGAGGAGTA+AGG | + | chr7.4:3551425-3551444 | None:intergenic | 35.0% | |
| TGATCCATTCCCAACAAAAT+AGG | - | chr7.4:3548897-3548916 | MS.gene78581:intron | 35.0% | |
| TGATGAATCAAAGCCATCTA+AGG | - | chr7.4:3548259-3548278 | MS.gene78581:intron | 35.0% | |
| TGCCATTGCAAGATATATCA+TGG | - | chr7.4:3547991-3548010 | MS.gene78581:intron | 35.0% | |
| TGTGGACGTAACAAATCAAA+CGG | + | chr7.4:3548032-3548051 | None:intergenic | 35.0% | |
| TTGAGATTATGCTGATGGTT+TGG | - | chr7.4:3548408-3548427 | MS.gene78581:intron | 35.0% | |
| TTGCATGTTATCTGCTTGTA+TGG | - | chr7.4:3550260-3550279 | MS.gene78581:intron | 35.0% | |
| TTGTGATAGTTACATGTAGC+AGG | - | chr7.4:3551368-3551387 | MS.gene78581:intron | 35.0% | |
| ! | AAGCAATGCCCTATTTTGTT+GGG | + | chr7.4:3548909-3548928 | None:intergenic | 35.0% |
| ! | AAGCCATCTAAGGATACTTT+TGG | - | chr7.4:3548269-3548288 | MS.gene78581:intron | 35.0% |
| ! | AGTGAACATCATGAAAGTGT+TGG | - | chr7.4:3550335-3550354 | MS.gene78581:intron | 35.0% |
| ! | ATGCAAACGAAACATGCTTT+TGG | + | chr7.4:3548708-3548727 | None:intergenic | 35.0% |
| ! | ATGTGGTAGAAGAGTACAAT+TGG | - | chr7.4:3548675-3548694 | MS.gene78581:intron | 35.0% |
| ! | ATTGAAGTCACTTTGCAAGA+TGG | - | chr7.4:3549722-3549741 | MS.gene78581:intron | 35.0% |
| ! | ATTTTACACACAGAGTCGAT+TGG | + | chr7.4:3550387-3550406 | None:intergenic | 35.0% |
| ! | TAAGCAATGCCCTATTTTGT+TGG | + | chr7.4:3548910-3548929 | None:intergenic | 35.0% |
| ! | TCGTTTTCATTCAGTTCTGT+AGG | + | chr7.4:3548952-3548971 | None:intergenic | 35.0% |
| ! | TGCAAACGAAACATGCTTTT+GGG | + | chr7.4:3548707-3548726 | None:intergenic | 35.0% |
| !! | AAATGATGGTGGACAAAGTT+GGG | - | chr7.4:3552097-3552116 | MS.gene78581:intron | 35.0% |
| !! | ATCCCAAATCACTGCTTTTA+CGG | + | chr7.4:3550107-3550126 | None:intergenic | 35.0% |
| !! | CTACCAAAAGTATCCTTAGA+TGG | + | chr7.4:3548275-3548294 | None:intergenic | 35.0% |
| !! | GTTGATTTTCATGGCACAAA+AGG | - | chr7.4:3548536-3548555 | MS.gene78581:intron | 35.0% |
| !! | TGCTTTCTTTTGCTATGCTT+TGG | - | chr7.4:3551016-3551035 | MS.gene78581:intron | 35.0% |
| !! | TTCTTTTCAGGAGAGTGATA+CGG | - | chr7.4:3550710-3550729 | MS.gene78581:intron | 35.0% |
| !! | TTTTTGACTAGGTAACTCCT+GGG | - | chr7.4:3551652-3551671 | MS.gene78581:intron | 35.0% |
| !!! | CATGTTGTCGTTGATTTTCA+TGG | - | chr7.4:3548527-3548546 | MS.gene78581:intron | 35.0% |
| !!! | CTCTTTTGAGATTATGCTGA+TGG | - | chr7.4:3548403-3548422 | MS.gene78581:intron | 35.0% |
| AAAAGGTTCATCCAAAGGGA+AGG | - | chr7.4:3548553-3548572 | MS.gene78581:intron | 40.0% | |
| AACAACCAAACCTTTAGGTG+AGG | - | chr7.4:3549037-3549056 | MS.gene78581:CDS | 40.0% | |
| AACGACGATTCTGTGAATTC+TGG | - | chr7.4:3548967-3548986 | MS.gene78581:intron | 40.0% | |
| AAGATGGAAGGACATTTGAG+GGG | - | chr7.4:3549738-3549757 | MS.gene78581:intron | 40.0% | |
| AGAAAGAGGACAAACCATGT+TGG | + | chr7.4:3548070-3548089 | None:intergenic | 40.0% | |
| AGCAGTGACAGTATTCTGAA+GGG | + | chr7.4:3549903-3549922 | None:intergenic | 40.0% | |
| ATGTAGTTGACCTCACCTAA+AGG | + | chr7.4:3549050-3549069 | None:intergenic | 40.0% | |
| ATGTCTAAGGAAACTTCTGG+GGG | - | chr7.4:3548230-3548249 | MS.gene78581:intron | 40.0% | |
| ATTGCTCACTGGAATTAGTG+TGG | + | chr7.4:3547691-3547710 | None:intergenic | 40.0% | |
| CAAGATGGAAGGACATTTGA+GGG | - | chr7.4:3549737-3549756 | MS.gene78581:intron | 40.0% | |
| CACAATGCATATTATGGCAG+AGG | + | chr7.4:3551565-3551584 | None:intergenic | 40.0% | |
| CATGTCTAAGGAAACTTCTG+GGG | - | chr7.4:3548229-3548248 | MS.gene78581:intron | 40.0% | |
| CTGAAAACTCGACAGCAAAA+AGG | + | chr7.4:3549343-3549362 | None:intergenic | 40.0% | |
| GAAGACTAACAACGTTAGCA+GGG | + | chr7.4:3549145-3549164 | None:intergenic | 40.0% | |
| GACAGCAAAAAGGCAAAATG+AGG | + | chr7.4:3549333-3549352 | None:intergenic | 40.0% | |
| GACATGTCTAAGGAAACTTC+TGG | - | chr7.4:3548227-3548246 | MS.gene78581:intron | 40.0% | |
| GACCGTAAAAGCAGTGATTT+GGG | - | chr7.4:3550102-3550121 | MS.gene78581:intron | 40.0% | |
| GCACAAAAGGTTCATCCAAA+GGG | - | chr7.4:3548549-3548568 | MS.gene78581:intron | 40.0% | |
| GCAGGTTATTGAAATGATGG+TGG | - | chr7.4:3552086-3552105 | MS.gene78581:intron | 40.0% | |
| GCTTTGTATGACTCAAAGCT+AGG | - | chr7.4:3548816-3548835 | MS.gene78581:intron | 40.0% | |
| GGAAGGTTTGTGTTCAAGAA+AGG | - | chr7.4:3548570-3548589 | MS.gene78581:intron | 40.0% | |
| GGTGCGAAGATAAAACTTTC+TGG | - | chr7.4:3549933-3549952 | MS.gene78581:CDS | 40.0% | |
| GTGGACGTAACAAATCAAAC+GGG | + | chr7.4:3548031-3548050 | None:intergenic | 40.0% | |
| TCTACTTGGGTAGTTTATGC+GGG | + | chr7.4:3550202-3550221 | None:intergenic | 40.0% | |
| TCTCCATCCATATTGACAAG+TGG | + | chr7.4:3550306-3550325 | None:intergenic | 40.0% | |
| TCTGATGTCTTCATTTCACG+AGG | + | chr7.4:3549672-3549691 | None:intergenic | 40.0% | |
| TGACCGTAAAAGCAGTGATT+TGG | - | chr7.4:3550101-3550120 | MS.gene78581:intron | 40.0% | |
| TGCGACTTTAACTGTGATTC+CGG | - | chr7.4:3552161-3552180 | MS.gene78581:CDS | 40.0% | |
| TGGACGTAACAAATCAAACG+GGG | + | chr7.4:3548030-3548049 | None:intergenic | 40.0% | |
| TGGCTGTAAAAGATGTCTCT+TGG | - | chr7.4:3549953-3549972 | MS.gene78581:CDS | 40.0% | |
| TTATCTGCTTGTATGGCACA+GGG | - | chr7.4:3550267-3550286 | MS.gene78581:intron | 40.0% | |
| TTCACAGGACAGTATCTTCA+TGG | - | chr7.4:3550899-3550918 | MS.gene78581:intron | 40.0% | |
| TTGAACACAAACCTTCCCTT+TGG | + | chr7.4:3548567-3548586 | None:intergenic | 40.0% | |
| ! | AACATGGTTTGTCCTCTTTC+TGG | - | chr7.4:3548069-3548088 | MS.gene78581:CDS | 40.0% |
| ! | AAGTCACTTTGCAAGATGGA+AGG | - | chr7.4:3549726-3549745 | MS.gene78581:intron | 40.0% |
| ! | ACAGTATTCTGAAGGGAATG+CGG | + | chr7.4:3549896-3549915 | None:intergenic | 40.0% |
| ! | AGCAGTGATTTGGGATTTAG+TGG | - | chr7.4:3550111-3550130 | MS.gene78581:intron | 40.0% |
| ! | ATGCCCTATTTTGTTGGGAA+TGG | + | chr7.4:3548904-3548923 | None:intergenic | 40.0% |
| ! | ATGCTGATGGTTTGGAGTAT+TGG | - | chr7.4:3548416-3548435 | MS.gene78581:intron | 40.0% |
| ! | CAAAGCTTGGTTCTTCAACT+AGG | - | chr7.4:3549834-3549853 | MS.gene78581:intron | 40.0% |
| ! | TTTGCTACAGGGAAGAGTAT+TGG | - | chr7.4:3548458-3548477 | MS.gene78581:intron | 40.0% |
| !! | AAATTCTGAAACCCCACTTC+CGG | - | chr7.4:3549808-3549827 | MS.gene78581:intron | 40.0% |
| !! | AATGATGGTGGACAAAGTTG+GGG | - | chr7.4:3552098-3552117 | MS.gene78581:intron | 40.0% |
| !! | GAAATGATGGTGGACAAAGT+TGG | - | chr7.4:3552096-3552115 | MS.gene78581:intron | 40.0% |
| !! | GTTTTTGACTAGGTAACTCC+TGG | - | chr7.4:3551651-3551670 | MS.gene78581:intron | 40.0% |
| !! | TAAGGGCATTCTTGTACCAA+TGG | - | chr7.4:3550819-3550838 | MS.gene78581:intron | 40.0% |
| !! | TTGTATAGTAGCTTGCTTGC+CGG | - | chr7.4:3549503-3549522 | MS.gene78581:intron | 40.0% |
| AAGCTGAGATTGGATTCCTC+CGG | + | chr7.4:3552183-3552202 | None:intergenic | 45.0% | |
| AAGGACATTTGAGGGGAAAG+TGG | - | chr7.4:3549745-3549764 | MS.gene78581:intron | 45.0% | |
| ACACACAGAGTCGATTGGTA+CGG | + | chr7.4:3550382-3550401 | None:intergenic | 45.0% | |
| ACATGTCCGAAGAAGGAACA+GGG | + | chr7.4:3548214-3548233 | None:intergenic | 45.0% | |
| AGCATTCTTAGTCCAAGCCA+TGG | + | chr7.4:3550736-3550755 | None:intergenic | 45.0% | |
| AGGGTGGCTTAAGATCTGAT+GGG | - | chr7.4:3548836-3548855 | MS.gene78581:intron | 45.0% | |
| AGTGAATGTGGAAAGGAAGG+AGG | + | chr7.4:3549240-3549259 | None:intergenic | 45.0% | |
| AGTTAGCCCTGTTCCTTCTT+CGG | - | chr7.4:3548205-3548224 | MS.gene78581:intron | 45.0% | |
| CAATGACAACATCACCAGGA+CGG | + | chr7.4:3551701-3551720 | None:intergenic | 45.0% | |
| CAGCAGTGACAGTATTCTGA+AGG | + | chr7.4:3549904-3549923 | None:intergenic | 45.0% | |
| CTGTCACTGCTGGTATTGTA+AGG | - | chr7.4:3549912-3549931 | MS.gene78581:CDS | 45.0% | |
| CTTCAGAATACTGTCACTGC+TGG | - | chr7.4:3549902-3549921 | MS.gene78581:CDS | 45.0% | |
| GAAGAACCAAGCTTTGCTTC+CGG | + | chr7.4:3549830-3549849 | None:intergenic | 45.0% | |
| GACTTTAACTGTGATTCCGG+AGG | - | chr7.4:3552164-3552183 | MS.gene78581:CDS | 45.0% | |
| GATCTGGGGAGCAAAACAAT+TGG | - | chr7.4:3551839-3551858 | MS.gene78581:intron | 45.0% | |
| GCAAATGCTGCTGCTAAAGT+TGG | - | chr7.4:3548305-3548324 | MS.gene78581:intron | 45.0% | |
| GCAAGATGGAAGGACATTTG+AGG | - | chr7.4:3549736-3549755 | MS.gene78581:intron | 45.0% | |
| GGAAGACTAACAACGTTAGC+AGG | + | chr7.4:3549146-3549165 | None:intergenic | 45.0% | |
| GGCAAGCAAGCTACTATACA+AGG | + | chr7.4:3549504-3549523 | None:intergenic | 45.0% | |
| GGCACAAAAGGTTCATCCAA+AGG | - | chr7.4:3548548-3548567 | MS.gene78581:intron | 45.0% | |
| GTTATCTGCTTGTATGGCAC+AGG | - | chr7.4:3550266-3550285 | MS.gene78581:intron | 45.0% | |
| GTTGACCTCACCTAAAGGTT+TGG | + | chr7.4:3549045-3549064 | None:intergenic | 45.0% | |
| TACCTCCTTCATGCTTTCCA+CGG | + | chr7.4:3551739-3551758 | None:intergenic | 45.0% | |
| TACTGTTCTTGCTTGGTCTG+TGG | - | chr7.4:3548794-3548813 | MS.gene78581:intron | 45.0% | |
| TAGGGTGGCTTAAGATCTGA+TGG | - | chr7.4:3548835-3548854 | MS.gene78581:intron | 45.0% | |
| TATGTTAGTGAAGCCATGGG+CGG | - | chr7.4:3551060-3551079 | MS.gene78581:intron | 45.0% | |
| TCCTTAGACATGTCCGAAGA+AGG | + | chr7.4:3548221-3548240 | None:intergenic | 45.0% | |
| TCCTTCTTCGGACATGTCTA+AGG | - | chr7.4:3548217-3548236 | MS.gene78581:intron | 45.0% | |
| TGAATTTGATGGAAAGCCCG+TGG | - | chr7.4:3551719-3551738 | MS.gene78581:intron | 45.0% | |
| TGGGTAGTTTATGCGGGAAA+AGG | + | chr7.4:3550196-3550215 | None:intergenic | 45.0% | |
| TGGTCGAAAGACGACAAATG+TGG | + | chr7.4:3548050-3548069 | None:intergenic | 45.0% | |
| TGTATGACTCAAAGCTAGGG+TGG | - | chr7.4:3548820-3548839 | MS.gene78581:intron | 45.0% | |
| TGTATGGCACAGGGAAATTC+TGG | - | chr7.4:3550276-3550295 | MS.gene78581:intron | 45.0% | |
| TTGTCGTCTTTCGACCAACA+TGG | - | chr7.4:3548053-3548072 | MS.gene78581:CDS | 45.0% | |
| ! | AGCTTGCTTGCCAGAACAAT+TGG | - | chr7.4:3549454-3549473 | MS.gene78581:CDS | 45.0% |
| ! | CATTGTGTTGCTCAAATGCG+AGG | - | chr7.4:3551578-3551597 | MS.gene78581:CDS | 45.0% |
| ! | GAAGTGCTACTGTTCTTGCT+TGG | - | chr7.4:3548787-3548806 | MS.gene78581:intron | 45.0% |
| !! | ATGAAAGTGTTGGCTGCTGA+TGG | - | chr7.4:3550345-3550364 | MS.gene78581:intron | 45.0% |
| !! | TGAAAGTGTTGGCTGCTGAT+GGG | - | chr7.4:3550346-3550365 | MS.gene78581:intron | 45.0% |
| AACGATACCCACAGCTCCAA+CGG | + | chr7.4:3547636-3547655 | None:intergenic | 50.0% | |
| AAGCTTTGCTTCCGGAAGTG+GGG | + | chr7.4:3549822-3549841 | None:intergenic | 50.0% | |
| ACCTCCTTCATGCTTTCCAC+GGG | + | chr7.4:3551738-3551757 | None:intergenic | 50.0% | |
| ATGGCACAGGGAAATTCTGG+AGG | - | chr7.4:3550279-3550298 | MS.gene78581:intron | 50.0% | |
| ATGGCTATTACCCAATCCCC+GGG | + | chr7.4:3549866-3549885 | None:intergenic | 50.0% | |
| CAAGCTTTGCTTCCGGAAGT+GGG | + | chr7.4:3549823-3549842 | None:intergenic | 50.0% | |
| CATGGCTATTACCCAATCCC+CGG | + | chr7.4:3549867-3549886 | None:intergenic | 50.0% | |
| GACATGTCCGAAGAAGGAAC+AGG | + | chr7.4:3548215-3548234 | None:intergenic | 50.0% | |
| GGGCCACTTGTCAATATGGA+TGG | - | chr7.4:3550300-3550319 | MS.gene78581:intron | 50.0% | |
| GGGGATTGGGTAATAGCCAT+GGG | - | chr7.4:3549866-3549885 | MS.gene78581:intron | 50.0% | |
| GTAGAAGTTTGAACCGCCCA+TGG | + | chr7.4:3551076-3551095 | None:intergenic | 50.0% | |
| TAGGAACGTTCGTACGTGTG+CGG | - | chr7.4:3547961-3547980 | MS.gene78581:intron | 50.0% | |
| TCTTCAACTAGGCTTCGTCC+CGG | - | chr7.4:3549845-3549864 | MS.gene78581:intron | 50.0% | |
| TGGAGGGCCACTTGTCAATA+TGG | - | chr7.4:3550296-3550315 | MS.gene78581:intron | 50.0% | |
| TGGCACAGGGAAATTCTGGA+GGG | - | chr7.4:3550280-3550299 | MS.gene78581:intron | 50.0% | |
| TTGAACAGAAGCTCTGCCGT+TGG | - | chr7.4:3547617-3547636 | MS.gene78581:CDS | 50.0% | |
| ! | AAAGCCCGTGGAAAGCATGA+AGG | - | chr7.4:3551731-3551750 | MS.gene78581:intron | 50.0% |
| ! | AGCTTGCTTGCCGGATCAAT+TGG | - | chr7.4:3549512-3549531 | MS.gene78581:intron | 50.0% |
| !! | ACAGGGAAGAGTATTGGCTC+TGG | - | chr7.4:3548464-3548483 | MS.gene78581:intron | 50.0% |
| AAGGGAATGCGGACAACCCA+TGG | + | chr7.4:3549885-3549904 | None:intergenic | 55.0% | |
| AGAGTGATACGGCCATGGCT+TGG | - | chr7.4:3550721-3550740 | MS.gene78581:intron | 55.0% | |
| CCAAGCTTTGCTTCCGGAAG+TGG | + | chr7.4:3549824-3549843 | None:intergenic | 55.0% | |
| CCACTTCCGGAAGCAAAGCT+TGG | - | chr7.4:3549821-3549840 | MS.gene78581:intron | 55.0% | |
| CGGGGATTGGGTAATAGCCA+TGG | - | chr7.4:3549865-3549884 | MS.gene78581:intron | 55.0% | |
| CTTCAACTAGGCTTCGTCCC+GGG | - | chr7.4:3549846-3549865 | MS.gene78581:intron | 55.0% | |
| TCAGGAGAGTGATACGGCCA+TGG | - | chr7.4:3550716-3550735 | MS.gene78581:intron | 55.0% | |
| TTCAACTAGGCTTCGTCCCG+GGG | - | chr7.4:3549847-3549866 | MS.gene78581:intron | 55.0% | |
| ! | CAAAGTTGGGGTGCCCATGA+AGG | - | chr7.4:3552110-3552129 | MS.gene78581:CDS | 55.0% |
| ! | GCTGTGGGTATCGTTGCTGT+TGG | - | chr7.4:3547641-3547660 | MS.gene78581:CDS | 55.0% |
| !! | AGTGTTGGCTGCTGATGGGT+TGG | - | chr7.4:3550350-3550369 | MS.gene78581:intron | 55.0% |
| !! | GTGTTGGCTGCTGATGGGTT+GGG | - | chr7.4:3550351-3550370 | MS.gene78581:intron | 55.0% |
| AAGCTCTGCCGTTGGAGCTG+TGG | - | chr7.4:3547625-3547644 | MS.gene78581:CDS | 60.0% | |
| AGCTCTGCCGTTGGAGCTGT+GGG | - | chr7.4:3547626-3547645 | MS.gene78581:CDS | 60.0% | |
| GAACCCAGCACGATCACCAG+GGG | + | chr7.4:3551679-3551698 | None:intergenic | 60.0% | |
| GGAACCCAGCACGATCACCA+GGG | + | chr7.4:3551680-3551699 | None:intergenic | 60.0% | |
| TAGGCTTCGTCCCGGGGATT+GGG | - | chr7.4:3549853-3549872 | MS.gene78581:intron | 60.0% | |
| TAGGTAACTCCTGGGTCCCC+TGG | - | chr7.4:3551660-3551679 | MS.gene78581:intron | 60.0% | |
| ! | GCCCGTGGAAAGCATGAAGG+AGG | - | chr7.4:3551734-3551753 | MS.gene78581:CDS | 60.0% |
| CGGAACCCAGCACGATCACC+AGG | + | chr7.4:3551681-3551700 | None:intergenic | 65.0% | |
| CTAGGCTTCGTCCCGGGGAT+TGG | - | chr7.4:3549852-3549871 | MS.gene78581:intron | 65.0% | |
| GATCGTGCTGGGTTCCGTCC+TGG | - | chr7.4:3551684-3551703 | MS.gene78581:intron | 65.0% | |
| GGTCCCCTGGTGATCGTGCT+GGG | - | chr7.4:3551673-3551692 | MS.gene78581:intron | 65.0% | |
| GCACGATCACCAGGGGACCC+AGG | + | chr7.4:3551672-3551691 | None:intergenic | 70.0% | |
| GGGTCCCCTGGTGATCGTGC+TGG | - | chr7.4:3551672-3551691 | MS.gene78581:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 3547602 | 3552206 | 3547602 | ID=MS.gene78581 |
| chr7.4 | mRNA | 3547602 | 3552206 | 3547602 | ID=MS.gene78581.t1;Parent=MS.gene78581 |
| chr7.4 | exon | 3552107 | 3552206 | 3552107 | ID=MS.gene78581.t1.exon1;Parent=MS.gene78581.t1 |
| chr7.4 | CDS | 3552107 | 3552206 | 3552107 | ID=cds.MS.gene78581.t1;Parent=MS.gene78581.t1 |
| chr7.4 | exon | 3551734 | 3551844 | 3551734 | ID=MS.gene78581.t1.exon2;Parent=MS.gene78581.t1 |
| chr7.4 | CDS | 3551734 | 3551844 | 3551734 | ID=cds.MS.gene78581.t1;Parent=MS.gene78581.t1 |
| chr7.4 | exon | 3551449 | 3551628 | 3551449 | ID=MS.gene78581.t1.exon3;Parent=MS.gene78581.t1 |
| chr7.4 | CDS | 3551449 | 3551628 | 3551449 | ID=cds.MS.gene78581.t1;Parent=MS.gene78581.t1 |
| chr7.4 | exon | 3551234 | 3551361 | 3551234 | ID=MS.gene78581.t1.exon4;Parent=MS.gene78581.t1 |
| chr7.4 | CDS | 3551234 | 3551361 | 3551234 | ID=cds.MS.gene78581.t1;Parent=MS.gene78581.t1 |
| chr7.4 | exon | 3549875 | 3550086 | 3549875 | ID=MS.gene78581.t1.exon5;Parent=MS.gene78581.t1 |
| chr7.4 | CDS | 3549875 | 3550086 | 3549875 | ID=cds.MS.gene78581.t1;Parent=MS.gene78581.t1 |
| chr7.4 | exon | 3549632 | 3549713 | 3549632 | ID=MS.gene78581.t1.exon6;Parent=MS.gene78581.t1 |
| chr7.4 | CDS | 3549632 | 3549713 | 3549632 | ID=cds.MS.gene78581.t1;Parent=MS.gene78581.t1 |
| chr7.4 | exon | 3549378 | 3549520 | 3549378 | ID=MS.gene78581.t1.exon7;Parent=MS.gene78581.t1 |
| chr7.4 | CDS | 3549378 | 3549520 | 3549378 | ID=cds.MS.gene78581.t1;Parent=MS.gene78581.t1 |
| chr7.4 | exon | 3548968 | 3549088 | 3548968 | ID=MS.gene78581.t1.exon8;Parent=MS.gene78581.t1 |
| chr7.4 | CDS | 3548968 | 3549088 | 3548968 | ID=cds.MS.gene78581.t1;Parent=MS.gene78581.t1 |
| chr7.4 | exon | 3548053 | 3548145 | 3548053 | ID=MS.gene78581.t1.exon9;Parent=MS.gene78581.t1 |
| chr7.4 | CDS | 3548053 | 3548145 | 3548053 | ID=cds.MS.gene78581.t1;Parent=MS.gene78581.t1 |
| chr7.4 | exon | 3547602 | 3547718 | 3547602 | ID=MS.gene78581.t1.exon10;Parent=MS.gene78581.t1 |
| chr7.4 | CDS | 3547602 | 3547718 | 3547602 | ID=cds.MS.gene78581.t1;Parent=MS.gene78581.t1 |
| Gene Sequence |
| Protein sequence |
