AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene78594

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78594.t1 MTR_7g113410 97.232 867 22 1 1 865 1 867 0.0 1750
MS.gene78594.t1 MTR_1g083020 75.029 865 209 4 1 865 1 858 0.0 1350
MS.gene78594.t1 MTR_1g104650 64.824 850 289 6 24 865 9 856 0.0 1173
MS.gene78594.t1 MTR_8g018420 60.093 862 316 8 20 865 7 856 0.0 1082
MS.gene78594.t1 MTR_2g099570 59.591 881 320 10 1 865 1 861 0.0 1081
MS.gene78594.t1 MTR_2g099560 59.209 885 319 10 1 865 1 863 0.0 1081
MS.gene78594.t1 MTR_8g020990 56.879 865 339 8 24 865 15 868 0.0 1005
MS.gene78594.t1 MTR_8g018730 57.324 867 332 9 24 865 11 864 0.0 1005
MS.gene78594.t1 MTR_8g018430 56.562 861 344 8 24 865 12 861 0.0 1004
MS.gene78594.t1 MTR_8g018735 57.534 876 331 10 15 865 6 865 0.0 1004
MS.gene78594.t1 MTR_5g024020 56.912 868 335 11 24 865 13 867 0.0 1003
MS.gene78594.t1 MTR_3g081130 56.069 865 350 8 19 865 6 858 0.0 1001
MS.gene78594.t1 MTR_8g018510 55.849 872 348 10 19 865 10 869 0.0 999
MS.gene78594.t1 MTR_8g018570 56.813 866 340 9 24 865 15 870 0.0 997
MS.gene78594.t1 MTR_8g018550 56.763 865 340 7 24 865 15 868 0.0 994
MS.gene78594.t1 MTR_8g018690 55.743 888 347 10 1 865 1 865 0.0 990
MS.gene78594.t1 MTR_8g018520 56.301 865 344 7 24 865 15 868 0.0 987
MS.gene78594.t1 MTR_3g081130 57.967 797 322 6 70 865 2 786 0.0 971
MS.gene78594.t1 MTR_8g018730 55.671 864 321 8 24 865 11 834 0.0 966
MS.gene78594.t1 MTR_8g018690 54.167 888 341 11 1 865 1 845 0.0 949
MS.gene78594.t1 MTR_5g024020 54.608 868 319 12 24 865 13 831 0.0 945
MS.gene78594.t1 MTR_8g018450 53.757 865 333 11 22 865 10 828 0.0 926
MS.gene78594.t1 MTR_8g018620 51.874 854 343 15 24 865 10 807 0.0 853
MS.gene78594.t1 MTR_8g018650 51.114 853 351 13 24 865 10 807 0.0 848
MS.gene78594.t1 MTR_8g018590 52.536 828 338 15 54 865 35 823 0.0 828
MS.gene78594.t1 MTR_8g018730 62.862 587 211 4 282 865 2 584 0.0 769
MS.gene78594.t1 MTR_8g020970 46.746 845 437 12 24 864 91 926 0.0 758
MS.gene78594.t1 MTR_8g080230 44.066 851 443 17 24 865 90 916 0.0 706
MS.gene78594.t1 MTR_8g011340 44.015 802 424 13 36 824 37 826 0.0 694
MS.gene78594.t1 MTR_3g479460 43.562 831 432 14 49 865 96 903 0.0 676
MS.gene78594.t1 MTR_3g079450 43.066 822 443 13 52 865 98 902 0.0 660
MS.gene78594.t1 MTR_8g018735 55.377 623 239 10 18 615 7 615 0.0 656
MS.gene78594.t1 MTR_4g066170 42.322 827 452 15 46 865 98 906 0.0 649
MS.gene78594.t1 MTR_3g079420 43.137 867 458 14 12 865 21 865 0.0 647
MS.gene78594.t1 MTR_4g088810 41.400 814 437 14 57 864 115 894 0.0 620
MS.gene78594.t1 MTR_8g021020 62.785 395 146 1 472 865 37 431 0.0 533
MS.gene78594.t1 MTR_6g452500 42.951 610 330 9 250 853 13 610 2.11e-174 518
MS.gene78594.t1 MTR_8g020970 45.882 595 310 11 24 615 91 676 1.68e-169 507
MS.gene78594.t1 MTR_3g079450 42.982 570 302 12 52 615 98 650 2.37e-141 434
MS.gene78594.t1 MTR_7g012030 57.143 119 50 1 518 635 85 203 5.50e-41 150
MS.gene78594.t1 MTR_6g046330 51.538 130 51 2 518 635 75 204 8.11e-36 138
MS.gene78594.t1 MTR_3g107560 37.885 227 78 7 643 865 7 174 1.01e-35 133
MS.gene78594.t1 MTR_8g463810 33.628 226 84 5 427 651 197 357 8.82e-28 117
MS.gene78594.t1 MTR_7g113408 77.049 61 14 0 759 819 9 69 1.17e-26 104
MS.gene78594.t1 MTR_2g005920 62.500 56 21 0 739 794 58 113 2.18e-17 79.3
MS.gene78594.t1 MTR_4g088805 41.758 91 52 1 775 864 1 91 1.36e-14 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78594.t1 AT1G55020 68.743 867 261 6 1 865 1 859 0.0 1247
MS.gene78594.t1 AT3G22400 65.533 853 282 5 24 865 35 886 0.0 1182
MS.gene78594.t1 AT1G17420 44.208 846 456 14 24 865 86 919 0.0 717
MS.gene78594.t1 AT1G72520 43.381 846 464 13 24 865 92 926 0.0 706
MS.gene78594.t1 AT3G45140 42.926 834 430 16 46 865 95 896 0.0 669
MS.gene78594.t1 AT3G45140 44.703 774 394 14 106 865 1 754 0.0 659
MS.gene78594.t1 AT1G67560 42.737 833 431 16 53 865 111 917 0.0 634

Find 190 sgRNAs with CRISPR-Local

Find 375 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTCACTGTTTGCATCTT+TGG 0.153160 7.4:-3408847 None:intergenic
TGTTGATTCACCAGCTATTA+AGG 0.193370 7.4:-3405876 None:intergenic
GTTAGGCCACTTTCACTTCT+AGG 0.225209 7.4:-3409309 None:intergenic
TTCATGAGTTGGTGGGAAAA+AGG 0.244185 7.4:+3403535 MS.gene78594:CDS
GTCATCATTCTTGTAGTAAA+AGG 0.263842 7.4:-3408737 None:intergenic
ACAAAAGAAGTTGTTTATAT+TGG 0.264720 7.4:+3407715 MS.gene78594:CDS
TCAAATAGTGATTCTAGTTC+AGG 0.291856 7.4:-3406786 None:intergenic
AAACTTGCACAATCATTATA+TGG 0.292143 7.4:+3408878 MS.gene78594:CDS
GATTGATCGCCGTAGACTTT+AGG 0.299463 7.4:-3407500 None:intergenic
ATACAAGGTTACATTTGATT+TGG 0.306826 7.4:+3405898 MS.gene78594:CDS
GTTTACACGCCTGCCGAAAA+TGG 0.309607 7.4:+3407908 MS.gene78594:CDS
ATCTACTGGCAGTGCTTGTT+CGG 0.312252 7.4:-3408340 None:intergenic
ACATATTTCGGACCTTTATC+AGG 0.315599 7.4:-3406356 None:intergenic
ATTTCAAATGGAGACACTAT+TGG 0.316773 7.4:-3409346 None:intergenic
TTGACCCTTGAAAATGTTCC+TGG 0.324876 7.4:+3405992 MS.gene78594:CDS
CCTGTGCCTCAAGTGATTAA+AGG 0.326223 7.4:+3406969 MS.gene78594:CDS
GGCACCATGTTGATCTCCTT+TGG 0.326521 7.4:-3407876 None:intergenic
TTTGATTTGGATGATGATAT+AGG 0.327711 7.4:+3405911 MS.gene78594:CDS
AAATATGTTCGTCCAGTTCT+TGG 0.331640 7.4:+3406371 MS.gene78594:CDS
TTGGAAGCATTTGACAGGTT+TGG 0.339988 7.4:+3409183 MS.gene78594:CDS
AGGGTGCAGTTAAAAGAATT+AGG 0.341496 7.4:+3406880 MS.gene78594:CDS
GATACACTGTGGCCTCTAAA+AGG 0.347158 7.4:-3408263 None:intergenic
CCCTGTCCCATTCTTTCAGT+TGG 0.350304 7.4:-3406298 None:intergenic
TGCAATCAACACATGGGTTC+AGG 0.362134 7.4:+3408705 MS.gene78594:CDS
GTTCCAAGGGACGAAAGATT+TGG 0.364392 7.4:+3406702 MS.gene78594:CDS
TTGAGTGCCTCATTTCTTGA+TGG 0.365038 7.4:+3403510 MS.gene78594:CDS
TCCACTTTATATGCAACTCT+TGG 0.374342 7.4:+3406026 MS.gene78594:CDS
TCTACTGGCAGTGCTTGTTC+GGG 0.375437 7.4:-3408339 None:intergenic
AGAACTGGACGAACATATTT+CGG 0.379753 7.4:-3406368 None:intergenic
AGAAGTGAAAGTGGCCTAAC+TGG 0.381679 7.4:+3409312 MS.gene78594:CDS
TGACAACTCCATGGCATACT+TGG 0.383790 7.4:-3408289 None:intergenic
CGGTGGACGGGCTAGAGATT+TGG 0.384457 7.4:+3408680 MS.gene78594:CDS
TGAAAATTCCATCTGGCAAT+TGG 0.385842 7.4:+3407934 MS.gene78594:CDS
CATCAGCGCTTTATAAGGAT+TGG 0.389682 7.4:+3408310 MS.gene78594:CDS
CTTGAAACTTTAAGAGGCTC+TGG 0.391703 7.4:+3406266 MS.gene78594:CDS
TCAAAGCTATCAAACTCATT+AGG 0.392213 7.4:-3406816 None:intergenic
TTATGCATACTATAATGATT+TGG 0.395542 7.4:+3406328 MS.gene78594:CDS
GAAGAACTTGAAACTTTAAG+AGG 0.395712 7.4:+3406260 MS.gene78594:CDS
GCGATCAATCTAGCACAATA+AGG 0.397443 7.4:+3407513 MS.gene78594:CDS
TTTCAAATGGAGACACTATT+GGG 0.397947 7.4:-3409345 None:intergenic
TGTTCTTATTATTATCATCA+TGG 0.417487 7.4:-3403422 None:intergenic
TGACCAAATCTTTCGTCCCT+TGG 0.417738 7.4:-3406705 None:intergenic
GCACAATTGCAGACTCTTGT+TGG 0.420832 7.4:+3409066 MS.gene78594:CDS
CAACTTGTAAGTGCTGATAA+AGG 0.421085 7.4:+3403567 MS.gene78594:CDS
GTTGATTCACCAGCTATTAA+GGG 0.423127 7.4:-3405875 None:intergenic
TACTCTATAGTTCCTTTCTC+AGG 0.424524 7.4:-3408994 None:intergenic
TCACTGGACCCTCCAAGAAC+TGG 0.432854 7.4:-3406383 None:intergenic
GTTGTCATCAGCGCTTTATA+AGG 0.438529 7.4:+3408305 MS.gene78594:CDS
AGGATGCAATAGTTTATGAA+TGG 0.446487 7.4:-3408178 None:intergenic
GCACCATGTTGATCTCCTTT+GGG 0.451509 7.4:-3407875 None:intergenic
TTCCAGTCTTCTAGATATGC+AGG 0.457636 7.4:-3405839 None:intergenic
AATAGATCACCCGCAAAGTC+AGG 0.460956 7.4:+3406434 MS.gene78594:CDS
TCTAGCCCGTCCACCGCGTA+AGG 0.463298 7.4:-3408673 None:intergenic
GGGTGCAGTTAAAAGAATTA+GGG 0.463960 7.4:+3406881 MS.gene78594:CDS
GATTTGGCGGATCCTGATAA+AGG 0.466833 7.4:+3406344 MS.gene78594:CDS
TTTGAAGGCAATGGCATGAA+AGG 0.468723 7.4:+3405803 MS.gene78594:intron
GTGAATATCCTTACCCTCGC+AGG 0.469001 7.4:+3406402 MS.gene78594:CDS
CGACTTATTGTTGGACGGTT+CGG 0.469027 7.4:-3408961 None:intergenic
CCTTTAATCACTTGAGGCAC+AGG 0.470108 7.4:-3406969 None:intergenic
GTTCTTCCCCTGCGAGGGTA+AGG 0.472026 7.4:-3406410 None:intergenic
CCACTTTATATGCAACTCTT+GGG 0.477995 7.4:+3406027 MS.gene78594:CDS
TCCAACTGAAAGAATGGGAC+AGG 0.478992 7.4:+3406297 MS.gene78594:CDS
CCCAAGAGTTGCATATAAAG+TGG 0.479128 7.4:-3406027 None:intergenic
AAATGGGACTTTGAAGCCAT+TGG 0.481148 7.4:+3407829 MS.gene78594:CDS
CTTGAGGCACAGGATATTTG+AGG 0.483024 7.4:-3406959 None:intergenic
GGATCTAGCTTAGATGTTGG+TGG 0.484972 7.4:-3407479 None:intergenic
CTACATGCAGCTGTAAACTT+TGG 0.486717 7.4:+3408913 MS.gene78594:CDS
TATTATCATCATGGATGCTA+AGG 0.487282 7.4:-3403413 None:intergenic
GTCTACACATTCTTCTGATG+AGG 0.487286 7.4:+3409110 MS.gene78594:CDS
TGTTGGTTCTTTCAGAGGAA+TGG 0.487934 7.4:+3408597 MS.gene78594:intron
CGTCAACTGTGAGTCCATCC+AGG 0.496070 7.4:-3407556 None:intergenic
TCTTGATGGTGTTCATGAGT+TGG 0.498587 7.4:+3403524 MS.gene78594:CDS
CTAGGATAAAGCAAAGTGTA+TGG 0.501452 7.4:-3409291 None:intergenic
AAAGCCGAACCTGACTTTGC+GGG 0.501840 7.4:-3406443 None:intergenic
CTTTATCCTAGAAGTGAAAG+TGG 0.502123 7.4:+3409303 MS.gene78594:CDS
ATTTCTTTGAGCATTTCAGC+AGG 0.502738 7.4:-3406912 None:intergenic
TTCTTAATTAGAAATGCTCC+TGG 0.503477 7.4:-3405938 None:intergenic
ATAGCATCCAACTGAAAGAA+TGG 0.504063 7.4:+3406291 MS.gene78594:CDS
AGCCATTGGAAGCATTTGAC+AGG 0.504173 7.4:+3409178 MS.gene78594:CDS
TACCTCTTGACAAGATCTAC+TGG 0.505972 7.4:-3408354 None:intergenic
TGGGAATGCCTGCACCAGTT+AGG 0.507950 7.4:-3409326 None:intergenic
GATTACCCTTACGCGGTGGA+CGG 0.508806 7.4:+3408667 MS.gene78594:CDS
AAGATGCAGAACTACAATCT+TGG 0.510627 7.4:+3408770 MS.gene78594:CDS
GGCATATGTCTTTGTAGAAG+TGG 0.510645 7.4:-3407780 None:intergenic
GCAAACAGTGAAAGAGTTGA+CGG 0.511807 7.4:+3408855 MS.gene78594:CDS
GAAAGTGGCCTAACTGGTGC+AGG 0.514023 7.4:+3409318 MS.gene78594:CDS
AAGAATGACCGCATTATGAG+AGG 0.514331 7.4:+3403444 MS.gene78594:CDS
CTTGAAAATGTTCCTGGCCA+AGG 0.515296 7.4:+3405998 MS.gene78594:CDS
CGTCGATTCATGCCTGAGAA+AGG 0.516325 7.4:+3408982 MS.gene78594:CDS
AATGGCATGAAAGGAAAAGT+TGG 0.517655 7.4:+3405812 MS.gene78594:CDS
TTAGGATCTAGCTTAGATGT+TGG 0.517902 7.4:-3407482 None:intergenic
AGGCGTGTAAACATTACTAA+TGG 0.517921 7.4:-3407897 None:intergenic
TAGCATCCAACTGAAAGAAT+GGG 0.518141 7.4:+3406292 MS.gene78594:CDS
ATGGTGTTGAAAATTCCATC+TGG 0.518818 7.4:+3407927 MS.gene78594:CDS
TTCATTGTGTCGCGGAAATG+AGG 0.519038 7.4:-3408198 None:intergenic
TTCGGTGAGTAACCTGCAAA+AGG 0.521926 7.4:-3408943 None:intergenic
CTTTATCAGCACTTACAAGT+TGG 0.528558 7.4:-3403566 None:intergenic
TCTTCTCTATACTTAAGAAG+TGG 0.528859 7.4:-3406239 None:intergenic
ATGAATCGACGACTTATTGT+TGG 0.529367 7.4:-3408970 None:intergenic
ATCAGATATTGAGAGCAGCC+TGG 0.529897 7.4:+3407538 MS.gene78594:CDS
GTAAATCCTGTCATAATTCG+TGG 0.529907 7.4:+3407253 MS.gene78594:CDS
TACTTAAACTCTATGAAGGT+GGG 0.530656 7.4:+3406844 MS.gene78594:CDS
ATGCAGAACTACAATCTTGG+TGG 0.532486 7.4:+3408773 MS.gene78594:CDS
GACATGTGATGCAGAGCCAT+TGG 0.534613 7.4:+3409164 MS.gene78594:CDS
CGACAAATCCTCATCAATGC+AGG 0.538234 7.4:+3408237 MS.gene78594:CDS
AAAAGCCGAACCTGACTTTG+CGG 0.538390 7.4:-3406444 None:intergenic
ATGGCATGAAAGGAAAAGTT+GGG 0.539672 7.4:+3405813 MS.gene78594:CDS
CTGTTTGCAGATATAATGAA+TGG 0.540083 7.4:-3408135 None:intergenic
GTTTGCATCTTTGGCCACCA+AGG 0.540490 7.4:-3408838 None:intergenic
AAGCTAGATCCTAAAGTCTA+CGG 0.541002 7.4:+3407491 MS.gene78594:CDS
TGTTGATCTCCTTTGGGATG+TGG 0.542065 7.4:-3407869 None:intergenic
ACAATCACACCCTTAATAGC+TGG 0.542399 7.4:+3405866 MS.gene78594:CDS
ATCATCAGCTTATCAGCCAC+TGG 0.542828 7.4:+3407990 MS.gene78594:CDS
AGCCTGCATATCTAGAAGAC+TGG 0.544605 7.4:+3405837 MS.gene78594:CDS
CTATACTTAAGAAGTGGAGC+TGG 0.545546 7.4:-3406233 None:intergenic
GATATTGAGAGCAGCCTGGA+TGG 0.545736 7.4:+3407542 MS.gene78594:CDS
TGCATACTATAATGATTTGG+CGG 0.546489 7.4:+3406331 MS.gene78594:CDS
TCTTCTGATGAGGTCTACCT+TGG 0.546946 7.4:+3409120 MS.gene78594:CDS
ATTACCCTTACGCGGTGGAC+GGG 0.548866 7.4:+3408668 MS.gene78594:CDS
AGAGTTTGCTAGAGAAATGC+TGG 0.552160 7.4:+3407225 MS.gene78594:CDS
AACATAGATGTCTAAGCTCA+TGG 0.556973 7.4:-3406682 None:intergenic
GATGTACTTAAACTCTATGA+AGG 0.557823 7.4:+3406840 MS.gene78594:CDS
AAAATACCTTTAATCACTTG+AGG 0.559739 7.4:-3406975 None:intergenic
TGATGGTGTTCATGAGTTGG+TGG 0.566353 7.4:+3403527 MS.gene78594:CDS
GGATGCAATAGTTTATGAAT+GGG 0.568425 7.4:-3408177 None:intergenic
TATTAGTTCTTCCCCTGCGA+GGG 0.568606 7.4:-3406415 None:intergenic
TGAATATCCTTACCCTCGCA+GGG 0.570835 7.4:+3406403 MS.gene78594:CDS
TATGTTCGTCCAGTTCTTGG+AGG 0.573994 7.4:+3406374 MS.gene78594:CDS
GACAAAGAGACAGTATGCAT+TGG 0.575350 7.4:+3409142 MS.gene78594:CDS
GCGAGGGTAAGGATATTCAC+TGG 0.577659 7.4:-3406399 None:intergenic
AACCTGTCAAATGCTTCCAA+TGG 0.578726 7.4:-3409180 None:intergenic
TGGAGGCCACGAATTATGAC+AGG 0.579147 7.4:-3407259 None:intergenic
AGCTGGTGAATCAACATACA+AGG 0.580875 7.4:+3405883 MS.gene78594:CDS
TATGTAGCAGTAAACGACTC+TGG 0.581259 7.4:+3407965 MS.gene78594:CDS
ATGTTCGTCCAGTTCTTGGA+GGG 0.581921 7.4:+3406375 MS.gene78594:CDS
TGGAAGGAATTAATACAAGA+AGG 0.582124 7.4:+3408793 MS.gene78594:CDS
TTTGGTTTGCAATCAACACA+TGG 0.583519 7.4:+3408698 MS.gene78594:CDS
GCTTAGACATCTATGTTCCA+AGG 0.583822 7.4:+3406688 MS.gene78594:CDS
AGCTTTAGCCAATTGCCAGA+TGG 0.583869 7.4:-3407942 None:intergenic
AACTCCATGGCATACTTGGA+AGG 0.584001 7.4:-3408285 None:intergenic
AGAATGACCGCATTATGAGA+GGG 0.586537 7.4:+3403445 MS.gene78594:CDS
CTATTAGTTCTTCCCCTGCG+AGG 0.588227 7.4:-3406416 None:intergenic
GTACTTAAACTCTATGAAGG+TGG 0.589447 7.4:+3406843 MS.gene78594:CDS
GCATACTGTCTCTTTGTCCA+AGG 0.591991 7.4:-3409137 None:intergenic
AAGTGGATAACACCTTGGCC+AGG 0.592029 7.4:-3406010 None:intergenic
ATTATTAGTCGAAGTCCATA+CGG 0.598054 7.4:-3408640 None:intergenic
ATGAACACCATCAAGAAATG+AGG 0.605278 7.4:-3403517 None:intergenic
CACTTATGACATACTTGAGG+AGG 0.606011 7.4:+3407750 MS.gene78594:CDS
GATGGTGTTCATGAGTTGGT+GGG 0.606734 7.4:+3403528 MS.gene78594:CDS
AAAGAAATTCTCCGAACTGA+CGG 0.607896 7.4:+3406927 MS.gene78594:CDS
CATTTATATTCATTGTGTCG+CGG 0.613410 7.4:-3408206 None:intergenic
AGTATGTCATAAGTGCATCA+TGG 0.613929 7.4:-3407742 None:intergenic
AGTGCTGATAAAGGCGACCC+TGG 0.614536 7.4:+3403576 MS.gene78594:CDS
AAAGATTCAGCATCTCCGTA+TGG 0.615049 7.4:+3408625 MS.gene78594:CDS
GTATCCTTCCAAGTATGCCA+TGG 0.615719 7.4:+3408281 MS.gene78594:CDS
AAACTCAATTCAATCGCCAA+TGG 0.618770 7.4:-3407845 None:intergenic
AAAGGCCACCTGCATTGATG+AGG 0.623496 7.4:-3408245 None:intergenic
CTTAGACATCTATGTTCCAA+GGG 0.624979 7.4:+3406689 MS.gene78594:CDS
AGAACTACAATCTTGGTGGA+AGG 0.627815 7.4:+3408777 MS.gene78594:CDS
TTTCTTTGAGCATTTCAGCA+GGG 0.628277 7.4:-3406911 None:intergenic
GATGATGATATAGGAACACC+AGG 0.628865 7.4:+3405920 MS.gene78594:CDS
TGCCAGTAGATCTTGTCAAG+AGG 0.630464 7.4:+3408352 MS.gene78594:CDS
CTAGCCCGTCCACCGCGTAA+GGG 0.632129 7.4:-3408672 None:intergenic
TTTGCTAGAGAAATGCTGGC+TGG 0.633196 7.4:+3407229 MS.gene78594:CDS
CTACAAAGACATATGCCAGT+AGG 0.633532 7.4:+3407786 MS.gene78594:CDS
ATCGACGACTTATTGTTGGA+CGG 0.634825 7.4:-3408966 None:intergenic
CTACTGGCAGTGCTTGTTCG+GGG 0.636016 7.4:-3408338 None:intergenic
ATATAAAGTGGATAACACCT+TGG 0.637121 7.4:-3406015 None:intergenic
AAGCGCTGATGACAACTCCA+TGG 0.638486 7.4:-3408298 None:intergenic
TTGAGTTTGCCACATCCCAA+AGG 0.639675 7.4:+3407860 MS.gene78594:CDS
GCATATCTAGAAGACTGGAA+TGG 0.643520 7.4:+3405842 MS.gene78594:CDS
CAAATCCTCATCAATGCAGG+TGG 0.644745 7.4:+3408240 MS.gene78594:CDS
TTGGTTTGCAATCAACACAT+GGG 0.646873 7.4:+3408699 MS.gene78594:CDS
GAGCAGAGGATAAATCTGCA+TGG 0.652109 7.4:+3407191 MS.gene78594:intron
CATCCCAAAGGAGATCAACA+TGG 0.659295 7.4:+3407872 MS.gene78594:CDS
AGGTGGGATAGAAGTTCCTG+AGG 0.659348 7.4:+3406860 MS.gene78594:CDS
ATGCACTTATGACATACTTG+AGG 0.669256 7.4:+3407747 MS.gene78594:CDS
CTACTTCCCCTCTCATAATG+CGG 0.676192 7.4:-3403452 None:intergenic
GGTGGGATAGAAGTTCCTGA+GGG 0.679854 7.4:+3406861 MS.gene78594:CDS
GGATGGACTCACAGTTGACG+AGG 0.680560 7.4:+3407559 MS.gene78594:CDS
GAATGACCGCATTATGAGAG+GGG 0.682880 7.4:+3403446 MS.gene78594:CDS
GATGCAATAGTTTATGAATG+GGG 0.686922 7.4:-3408176 None:intergenic
TTACTACAAGAATGATGACA+CGG 0.698169 7.4:+3408741 MS.gene78594:CDS
CCAACTGAAAGAATGGGACA+GGG 0.698738 7.4:+3406298 MS.gene78594:CDS
AATCGACGATTACCCTTACG+CGG 0.700260 7.4:+3408660 MS.gene78594:CDS
AACAAGAGTCTGCAATTGTG+CGG 0.716058 7.4:-3409064 None:intergenic
CGACGATTACCCTTACGCGG+TGG 0.719618 7.4:+3408663 MS.gene78594:CDS
GAATATCCTTACCCTCGCAG+GGG 0.721644 7.4:+3406404 MS.gene78594:CDS
GAATTAATACAAGAAGGACA+CGG 0.755206 7.4:+3408799 MS.gene78594:CDS
ATACTTGGAAGGATACACTG+TGG 0.828622 7.4:-3408274 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATATTAATTTTTTTAA+GGG - chr7.4:3405702-3405721 None:intergenic 0.0%
!!! TATTTATATTAATTTTTTTA+AGG - chr7.4:3405703-3405722 None:intergenic 0.0%
!! AAAATAATAATAATTCACAA+AGG - chr7.4:3408472-3408491 None:intergenic 10.0%
!! AACATGAAATATATAATATA+AGG - chr7.4:3408079-3408098 None:intergenic 10.0%
!!! ATTAATATCATTTTTGTAAA+AGG + chr7.4:3405565-3405584 MS.gene78594:intron 10.0%
!!! TACGATATAAATATATTTTT+TGG + chr7.4:3404652-3404671 MS.gene78594:intron 10.0%
!! AATATAAGGAAAAAAATTAG+TGG - chr7.4:3404211-3404230 None:intergenic 15.0%
!! CATGATAAATAAAATATCTA+AGG + chr7.4:3404356-3404375 MS.gene78594:intron 15.0%
!! TAAACATGATTAATTGTAAA+AGG - chr7.4:3403663-3403682 None:intergenic 15.0%
!! TTTCATAAATATATTAGTGA+TGG - chr7.4:3408410-3408429 None:intergenic 15.0%
!!! ACATAATATTGGTAATTAAA+TGG - chr7.4:3405405-3405424 None:intergenic 15.0%
!!! ACCAATATTATGTAAATTTT+GGG + chr7.4:3405412-3405431 MS.gene78594:intron 15.0%
!!! AGAAAAATACAATTTTCTTT+TGG - chr7.4:3407336-3407355 None:intergenic 15.0%
!!! ATTATGATCATAAATTTTGA+AGG + chr7.4:3405788-3405807 MS.gene78594:intron 15.0%
!!! ATTTGAGGTTTATAATAATT+AGG + chr7.4:3406144-3406163 MS.gene78594:intron 15.0%
!!! CTAATCAAATTTTGAATATA+AGG - chr7.4:3404225-3404244 None:intergenic 15.0%
!!! TACCAATATTATGTAAATTT+TGG + chr7.4:3405411-3405430 MS.gene78594:intron 15.0%
!!! TTTGAGGTTTATAATAATTA+GGG + chr7.4:3406145-3406164 MS.gene78594:intron 15.0%
!!! TTTTTTCTATTCAAAATCAA+AGG - chr7.4:3403903-3403922 None:intergenic 15.0%
!! AAACCATTATTGTATTGTAA+TGG + chr7.4:3407152-3407171 MS.gene78594:intron 20.0%
!! AACAATTTAAAAAAGCAAGT+GGG - chr7.4:3404949-3404968 None:intergenic 20.0%
!! AACATCTATAAAATGACAAT+TGG + chr7.4:3404880-3404899 MS.gene78594:intron 20.0%
!! AAGTTTCAGGAAATAAATTT+GGG - chr7.4:3407380-3407399 None:intergenic 20.0%
!! ACAAAAGAAGTTGTTTATAT+TGG + chr7.4:3407715-3407734 MS.gene78594:CDS 20.0%
!! ACCCAAAATTTACATAATAT+TGG - chr7.4:3405416-3405435 None:intergenic 20.0%
!! ACTACATTTAATGGTTTAAT+CGG - chr7.4:3405374-3405393 None:intergenic 20.0%
!! AGTTCATGATCATAAAAAAA+TGG - chr7.4:3408570-3408589 None:intergenic 20.0%
!! ATAAAATAAACTTATACCAG+TGG - chr7.4:3408009-3408028 None:intergenic 20.0%
!! ATTATGGTATGCAATATAAT+AGG - chr7.4:3407110-3407129 None:intergenic 20.0%
!! CAGTATAGAAAAATTAAGTT+TGG - chr7.4:3405660-3405679 None:intergenic 20.0%
!! GTAATGATTACTACATTTAA+TGG - chr7.4:3405383-3405402 None:intergenic 20.0%
!! TAACAATTTAAAAAAGCAAG+TGG - chr7.4:3404950-3404969 None:intergenic 20.0%
!! TAAGTTTCAGGAAATAAATT+TGG - chr7.4:3407381-3407400 None:intergenic 20.0%
!! TAGAAATTTCTAACCATAAT+AGG - chr7.4:3406594-3406613 None:intergenic 20.0%
!! TCAAAAATACTCATTATAGT+GGG - chr7.4:3403711-3403730 None:intergenic 20.0%
!! TCTAAATTAAATAGTCTAAG+TGG - chr7.4:3403765-3403784 None:intergenic 20.0%
!! TGAAATATCTAAGTCTAAAT+TGG - chr7.4:3405046-3405065 None:intergenic 20.0%
!! TGATCTTTATTATAGTTGAT+AGG - chr7.4:3403981-3404000 None:intergenic 20.0%
!! TGTTCTTATTATTATCATCA+TGG - chr7.4:3403425-3403444 None:intergenic 20.0%
!! TTATGCATACTATAATGATT+TGG + chr7.4:3406328-3406347 MS.gene78594:CDS 20.0%
!! TTCCTGCAATTTAATTAATA+AGG - chr7.4:3407456-3407475 None:intergenic 20.0%
!! TTGAGATTAAAAGACATATT+TGG + chr7.4:3405184-3405203 MS.gene78594:intron 20.0%
!!! AATATGAGCATATCTTTTTT+CGG - chr7.4:3405548-3405567 None:intergenic 20.0%
!!! AATTTTCAGAATACAGAATA+GGG - chr7.4:3404447-3404466 None:intergenic 20.0%
!!! AGTATTATAATTTTCTGCAT+AGG + chr7.4:3404969-3404988 MS.gene78594:intron 20.0%
!!! CATCTAATAATTTGTATTTG+AGG + chr7.4:3406129-3406148 MS.gene78594:intron 20.0%
!!! GCATATATTTTCAAATACAA+AGG - chr7.4:3404632-3404651 None:intergenic 20.0%
!!! GTGGTTTAAATTTTGAATAA+TGG - chr7.4:3404192-3404211 None:intergenic 20.0%
!!! TAAAAGGAGAAATTTTTCTA+GGG - chr7.4:3403647-3403666 None:intergenic 20.0%
!!! TGTTTTCAAAAAAGCTTTAT+CGG - chr7.4:3409040-3409059 None:intergenic 20.0%
!!! TTATTCAAAGATAGTTTTCT+TGG - chr7.4:3405735-3405754 None:intergenic 20.0%
!!! TTTATGTTTTGTTAACATTC+CGG + chr7.4:3408490-3408509 MS.gene78594:intron 20.0%
! AAAATACCTTTAATCACTTG+AGG - chr7.4:3406978-3406997 None:intergenic 25.0%
! AAACTTGCACAATCATTATA+TGG + chr7.4:3408878-3408897 MS.gene78594:CDS 25.0%
! AAATGGATCTTTACTTACAA+CGG - chr7.4:3408553-3408572 None:intergenic 25.0%
! AAATTAAATAGTCTAAGTGG+TGG - chr7.4:3403762-3403781 None:intergenic 25.0%
! AATTAATAAGGACAAATGTG+AGG - chr7.4:3407444-3407463 None:intergenic 25.0%
! ACAATTTAAAAAAGCAAGTG+GGG - chr7.4:3404948-3404967 None:intergenic 25.0%
! ACTTATTATAATTGTCCATG+AGG + chr7.4:3404798-3404817 MS.gene78594:intron 25.0%
! AGAAGAAATCAAATCTTCTA+AGG - chr7.4:3404263-3404282 None:intergenic 25.0%
! ATACAAGGTTACATTTGATT+TGG + chr7.4:3405898-3405917 MS.gene78594:CDS 25.0%
! ATGGTTAGAAATTTCTAATG+TGG + chr7.4:3406597-3406616 MS.gene78594:intron 25.0%
! ATTAATAAGGACAAATGTGA+GGG - chr7.4:3407443-3407462 None:intergenic 25.0%
! ATTGATGAAGAAAAATGTGT+TGG + chr7.4:3403476-3403495 MS.gene78594:CDS 25.0%
! CGAGTACATAATTAATAAAC+TGG - chr7.4:3406482-3406501 None:intergenic 25.0%
! GAAGAAATCAAATCTTCTAA+GGG - chr7.4:3404262-3404281 None:intergenic 25.0%
! GTAATTAGTACTATAGTTCA+AGG - chr7.4:3406172-3406191 None:intergenic 25.0%
! GTCAAAAATACTCATTATAG+TGG - chr7.4:3403712-3403731 None:intergenic 25.0%
! GTCCTTATTAATTAAATTGC+AGG + chr7.4:3407451-3407470 MS.gene78594:intron 25.0%
! TATATTAGTGATGGTCTAAT+TGG - chr7.4:3408401-3408420 None:intergenic 25.0%
! TATTTCATGTTGTATATCAC+AGG + chr7.4:3408088-3408107 MS.gene78594:intron 25.0%
! TTATGATCATAATACCATTC+AGG - chr7.4:3405781-3405800 None:intergenic 25.0%
! TTTACTATGAGATGAATCAT+CGG + chr7.4:3403785-3403804 MS.gene78594:intron 25.0%
!! ATTCTTTTTCTGCAACAAAA+TGG + chr7.4:3407812-3407831 MS.gene78594:CDS 25.0%
!! GAAAAATGTGTTGGATTTTA+AGG + chr7.4:3403485-3403504 MS.gene78594:CDS 25.0%
!! GAATTTTCAGAATACAGAAT+AGG - chr7.4:3404448-3404467 None:intergenic 25.0%
!! GTAAAAGGAGAAATTTTTCT+AGG - chr7.4:3403648-3403667 None:intergenic 25.0%
!! TAGAGATTGCATTTAAAACA+GGG - chr7.4:3405069-3405088 None:intergenic 25.0%
!! TTAGAGATTGCATTTAAAAC+AGG - chr7.4:3405070-3405089 None:intergenic 25.0%
!! TTCTTTTTCTGCAACAAAAT+GGG + chr7.4:3407813-3407832 MS.gene78594:CDS 25.0%
!! TTTTGGCAAAATTACTTCTA+TGG + chr7.4:3408033-3408052 MS.gene78594:intron 25.0%
!!! ATCATAAATTTTGAAGGCAA+TGG + chr7.4:3405794-3405813 MS.gene78594:intron 25.0%
!!! CCTTTTGATATTTTTGAGAA+GGG - chr7.4:3406057-3406076 None:intergenic 25.0%
!!! CTTTCTGAAGTAAACTATAA+TGG - chr7.4:3406545-3406564 None:intergenic 25.0%
!!! GTTTTCAAAAAAGCTTTATC+GGG - chr7.4:3409039-3409058 None:intergenic 25.0%
!!! TCCTTTTGATATTTTTGAGA+AGG - chr7.4:3406058-3406077 None:intergenic 25.0%
!!! TTTCTTTTAGAAAATAGCCA+AGG + chr7.4:3404748-3404767 MS.gene78594:intron 25.0%
!!! TTTGATTTGGATGATGATAT+AGG + chr7.4:3405911-3405930 MS.gene78594:CDS 25.0%
!!! TTTTTCTAGGGAAAAAAAGA+AGG - chr7.4:3403635-3403654 None:intergenic 25.0%
AATTTCTAACCATAATAGGC+AGG - chr7.4:3406590-3406609 None:intergenic 30.0%
ACTCTCAATTTAATCTCTGA+AGG - chr7.4:3405275-3405294 None:intergenic 30.0%
AGGATGCAATAGTTTATGAA+TGG - chr7.4:3408181-3408200 None:intergenic 30.0%
ATATAAAGTGGATAACACCT+TGG - chr7.4:3406018-3406037 None:intergenic 30.0%
ATTATTAGTCGAAGTCCATA+CGG - chr7.4:3408643-3408662 None:intergenic 30.0%
CATTTATATTCATTGTGTCG+CGG - chr7.4:3408209-3408228 None:intergenic 30.0%
CCCTTCTCAAAAATATCAAA+AGG + chr7.4:3406054-3406073 MS.gene78594:CDS 30.0%
CTCACTAGTCAAATAAATCA+TGG + chr7.4:3407406-3407425 MS.gene78594:intron 30.0%
CTGTTTGCAGATATAATGAA+TGG - chr7.4:3408138-3408157 None:intergenic 30.0%
GAAGAACTTGAAACTTTAAG+AGG + chr7.4:3406260-3406279 MS.gene78594:CDS 30.0%
GAATTAATACAAGAAGGACA+CGG + chr7.4:3408799-3408818 MS.gene78594:CDS 30.0%
GACAATGCATAAAATATGCA+AGG + chr7.4:3405497-3405516 MS.gene78594:intron 30.0%
GATGCAATAGTTTATGAATG+GGG - chr7.4:3408179-3408198 None:intergenic 30.0%
GATGTACTTAAACTCTATGA+AGG + chr7.4:3406840-3406859 MS.gene78594:CDS 30.0%
GGATGCAATAGTTTATGAAT+GGG - chr7.4:3408180-3408199 None:intergenic 30.0%
GTCATCATTCTTGTAGTAAA+AGG - chr7.4:3408740-3408759 None:intergenic 30.0%
TAAATAAAATTGCATCCCTG+TGG + chr7.4:3405121-3405140 MS.gene78594:intron 30.0%
TAATAAACTGGTGATCATTG+TGG - chr7.4:3406470-3406489 None:intergenic 30.0%
TACTTAAACTCTATGAAGGT+GGG + chr7.4:3406844-3406863 MS.gene78594:CDS 30.0%
TATTATCATCATGGATGCTA+AGG - chr7.4:3403416-3403435 None:intergenic 30.0%
TCAAAGCTATCAAACTCATT+AGG - chr7.4:3406819-3406838 None:intergenic 30.0%
TCTTCTCTATACTTAAGAAG+TGG - chr7.4:3406242-3406261 None:intergenic 30.0%
TGGAAGGAATTAATACAAGA+AGG + chr7.4:3408793-3408812 MS.gene78594:CDS 30.0%
TTAATAAGGACAAATGTGAG+GGG - chr7.4:3407442-3407461 None:intergenic 30.0%
TTACTACAAGAATGATGACA+CGG + chr7.4:3408741-3408760 MS.gene78594:CDS 30.0%
TTCTTAATTAGAAATGCTCC+TGG - chr7.4:3405941-3405960 None:intergenic 30.0%
! ATTCAACGAGTTCTTCTTTT+AGG + chr7.4:3404464-3404483 MS.gene78594:intron 30.0%
! GAGCTTAGTAATCTAGAATT+TGG + chr7.4:3408527-3408546 MS.gene78594:intron 30.0%
! GGAATTTTCAACACCATTTT+CGG - chr7.4:3407924-3407943 None:intergenic 30.0%
! GTGCCATTACAATACAATAA+TGG - chr7.4:3407158-3407177 None:intergenic 30.0%
! TGCATACTATAATGATTTGG+CGG + chr7.4:3406331-3406350 MS.gene78594:CDS 30.0%
! TGCATGACTTTTCTTGATTA+TGG - chr7.4:3407126-3407145 None:intergenic 30.0%
! TTTTCTTTCCTAACCCATAT+TGG - chr7.4:3404543-3404562 None:intergenic 30.0%
!! AAAGTGTATGGCATTTTAAC+AGG - chr7.4:3409282-3409301 None:intergenic 30.0%
!! ATACTCATTATAGTGGGTTA+TGG - chr7.4:3403705-3403724 None:intergenic 30.0%
!! TCAAATAGTGATTCTAGTTC+AGG - chr7.4:3406789-3406808 None:intergenic 30.0%
AAACTCAATTCAATCGCCAA+TGG - chr7.4:3407848-3407867 None:intergenic 35.0%
AAAGAAATTCTCCGAACTGA+CGG + chr7.4:3406927-3406946 MS.gene78594:CDS 35.0%
AAATATGTTCGTCCAGTTCT+TGG + chr7.4:3406371-3406390 MS.gene78594:CDS 35.0%
AACATAGATGTCTAAGCTCA+TGG - chr7.4:3406685-3406704 None:intergenic 35.0%
AAGATGCAGAACTACAATCT+TGG + chr7.4:3408770-3408789 MS.gene78594:CDS 35.0%
AAGCTAGATCCTAAAGTCTA+CGG + chr7.4:3407491-3407510 MS.gene78594:CDS 35.0%
AAGGAAAACTTGAGTGCTAA+GGG - chr7.4:3408060-3408079 None:intergenic 35.0%
AATGGCATGAAAGGAAAAGT+TGG + chr7.4:3405812-3405831 MS.gene78594:CDS 35.0%
ACAATTAGTCCTGCCTATTA+TGG + chr7.4:3406578-3406597 MS.gene78594:intron 35.0%
ACATATTTCGGACCTTTATC+AGG - chr7.4:3406359-3406378 None:intergenic 35.0%
ACATGTTCGTTATGAAGTGT+TGG + chr7.4:3407067-3407086 MS.gene78594:intron 35.0%
ACCCTAAATAATAGATGTCC+TGG + chr7.4:3403730-3403749 MS.gene78594:intron 35.0%
AGAACTGGACGAACATATTT+CGG - chr7.4:3406371-3406390 None:intergenic 35.0%
AGCTCCTTTATCTTAGAAAC+CGG - chr7.4:3408512-3408531 None:intergenic 35.0%
AGGAGAAAGAACAAAGTATG+AGG - chr7.4:3403615-3403634 None:intergenic 35.0%
AGGCGTGTAAACATTACTAA+TGG - chr7.4:3407900-3407919 None:intergenic 35.0%
AGGGTGCAGTTAAAAGAATT+AGG + chr7.4:3406880-3406899 MS.gene78594:CDS 35.0%
AGTATGTCATAAGTGCATCA+TGG - chr7.4:3407745-3407764 None:intergenic 35.0%
ATAGCATCCAACTGAAAGAA+TGG + chr7.4:3406291-3406310 MS.gene78594:CDS 35.0%
ATCATGAACTGATACGTTGT+TGG + chr7.4:3408580-3408599 MS.gene78594:intron 35.0%
ATGAACACCATCAAGAAATG+AGG - chr7.4:3403520-3403539 None:intergenic 35.0%
ATGAATCGACGACTTATTGT+TGG - chr7.4:3408973-3408992 None:intergenic 35.0%
ATGCACTTATGACATACTTG+AGG + chr7.4:3407747-3407766 MS.gene78594:CDS 35.0%
ATGGCATGAAAGGAAAAGTT+GGG + chr7.4:3405813-3405832 MS.gene78594:CDS 35.0%
ATTTCTTTGAGCATTTCAGC+AGG - chr7.4:3406915-3406934 None:intergenic 35.0%
CAGAAAAAGAATTGTCCTAC+TGG - chr7.4:3407804-3407823 None:intergenic 35.0%
CCACTTTATATGCAACTCTT+GGG + chr7.4:3406027-3406046 MS.gene78594:CDS 35.0%
CCCAGGACATCTATTATTTA+GGG - chr7.4:3403734-3403753 None:intergenic 35.0%
CCCTAAATAATAGATGTCCT+GGG + chr7.4:3403731-3403750 MS.gene78594:intron 35.0%
CCTAAATAATAGATGTCCTG+GGG + chr7.4:3403732-3403751 MS.gene78594:intron 35.0%
CTAGGATAAAGCAAAGTGTA+TGG - chr7.4:3409294-3409313 None:intergenic 35.0%
CTTAGACATCTATGTTCCAA+GGG + chr7.4:3406689-3406708 MS.gene78594:CDS 35.0%
CTTCATAACGAACATGTATC+CGG - chr7.4:3407064-3407083 None:intergenic 35.0%
CTTTATCAGCACTTACAAGT+TGG - chr7.4:3403569-3403588 None:intergenic 35.0%
CTTTATCCTAGAAGTGAAAG+TGG + chr7.4:3409303-3409322 MS.gene78594:CDS 35.0%
GACTAAGGTGAAACCAATAT+GGG + chr7.4:3404527-3404546 MS.gene78594:intron 35.0%
GAGGATGAAAATACTAACCA+GGG - chr7.4:3403596-3403615 None:intergenic 35.0%
GGGTGCAGTTAAAAGAATTA+GGG + chr7.4:3406881-3406900 MS.gene78594:CDS 35.0%
GTAAATCCTGTCATAATTCG+TGG + chr7.4:3407253-3407272 MS.gene78594:CDS 35.0%
GTACTTAAACTCTATGAAGG+TGG + chr7.4:3406843-3406862 MS.gene78594:CDS 35.0%
GTGAATCTCAAAAATCGAGT+TGG + chr7.4:3409255-3409274 MS.gene78594:CDS 35.0%
TAAGGAAAACTTGAGTGCTA+AGG - chr7.4:3408061-3408080 None:intergenic 35.0%
TACCATATGTTAAGCCTGAA+TGG + chr7.4:3405764-3405783 MS.gene78594:intron 35.0%
TACCATTCAGGCTTAACATA+TGG - chr7.4:3405769-3405788 None:intergenic 35.0%
TACTCTATAGTTCCTTTCTC+AGG - chr7.4:3408997-3409016 None:intergenic 35.0%
TAGCATCCAACTGAAAGAAT+GGG + chr7.4:3406292-3406311 MS.gene78594:CDS 35.0%
TAGTGAGTCTCTTAAGTTTC+AGG - chr7.4:3407393-3407412 None:intergenic 35.0%
TCCACTTTATATGCAACTCT+TGG + chr7.4:3406026-3406045 MS.gene78594:CDS 35.0%
TCTACAACAACTTAACCACA+GGG - chr7.4:3405139-3405158 None:intergenic 35.0%
TCTTTCACTGTTTGCATCTT+TGG - chr7.4:3408850-3408869 None:intergenic 35.0%
TGAAAATTCCATCTGGCAAT+TGG + chr7.4:3407934-3407953 MS.gene78594:CDS 35.0%
TGACTAAGGTGAAACCAATA+TGG + chr7.4:3404526-3404545 MS.gene78594:intron 35.0%
TGAGGATGAAAATACTAACC+AGG - chr7.4:3403597-3403616 None:intergenic 35.0%
TGCATAAAATATGCAAGGTC+CGG + chr7.4:3405502-3405521 MS.gene78594:intron 35.0%
TTCAGAATACAGAATAGGGT+GGG - chr7.4:3404443-3404462 None:intergenic 35.0%
TTTCAGAATACAGAATAGGG+TGG - chr7.4:3404444-3404463 None:intergenic 35.0%
TTTCTTTGAGCATTTCAGCA+GGG - chr7.4:3406914-3406933 None:intergenic 35.0%
! ATGGTGTTGAAAATTCCATC+TGG + chr7.4:3407927-3407946 MS.gene78594:CDS 35.0%
! CTCTTAATGATTTTGAGCAG+AGG + chr7.4:3407177-3407196 MS.gene78594:intron 35.0%
! GTTGATTCACCAGCTATTAA+GGG - chr7.4:3405878-3405897 None:intergenic 35.0%
! TTAGGATCTAGCTTAGATGT+TGG - chr7.4:3407485-3407504 None:intergenic 35.0%
! TTTCAAGGGTCAAGCTTTTT+AGG - chr7.4:3405985-3406004 None:intergenic 35.0%
! TTTGGACAATATCCTTTTGC+AGG + chr7.4:3408931-3408950 MS.gene78594:CDS 35.0%
!! CAACTTGTAAGTGCTGATAA+AGG + chr7.4:3403567-3403586 MS.gene78594:CDS 35.0%
!! CATTCCGGTTTCTAAGATAA+AGG + chr7.4:3408505-3408524 MS.gene78594:intron 35.0%
!! TATAGGGTATTGAAGCGTAT+TGG - chr7.4:3404412-3404431 None:intergenic 35.0%
!! TGTTGATTCACCAGCTATTA+AGG - chr7.4:3405879-3405898 None:intergenic 35.0%
!! TTGGTTTGCAATCAACACAT+GGG + chr7.4:3408699-3408718 MS.gene78594:CDS 35.0%
!! TTTGGTTTGCAATCAACACA+TGG + chr7.4:3408698-3408717 MS.gene78594:CDS 35.0%
!!! TATCTTTTTTCGGTAGTGAC+CGG - chr7.4:3405538-3405557 None:intergenic 35.0%
AAAGATTCAGCATCTCCGTA+TGG + chr7.4:3408625-3408644 MS.gene78594:CDS 40.0%
AACAAGAGTCTGCAATTGTG+CGG - chr7.4:3409067-3409086 None:intergenic 40.0%
AACCTGTCAAATGCTTCCAA+TGG - chr7.4:3409183-3409202 None:intergenic 40.0%
AAGAATGACCGCATTATGAG+AGG + chr7.4:3403444-3403463 MS.gene78594:CDS 40.0%
ACAATCACACCCTTAATAGC+TGG + chr7.4:3405866-3405885 MS.gene78594:CDS 40.0%
AGAACTACAATCTTGGTGGA+AGG + chr7.4:3408777-3408796 MS.gene78594:CDS 40.0%
AGAATGACCGCATTATGAGA+GGG + chr7.4:3403445-3403464 MS.gene78594:CDS 40.0%
AGCTGGTGAATCAACATACA+AGG + chr7.4:3405883-3405902 MS.gene78594:CDS 40.0%
AGGTGAAACCAATATGGGTT+AGG + chr7.4:3404532-3404551 MS.gene78594:intron 40.0%
ATACTTGGAAGGATACACTG+TGG - chr7.4:3408277-3408296 None:intergenic 40.0%
ATCGACGACTTATTGTTGGA+CGG - chr7.4:3408969-3408988 None:intergenic 40.0%
ATGCAGAACTACAATCTTGG+TGG + chr7.4:3408773-3408792 MS.gene78594:CDS 40.0%
CACTTATGACATACTTGAGG+AGG + chr7.4:3407750-3407769 MS.gene78594:CDS 40.0%
CATAAAATATGCAAGGTCCG+GGG + chr7.4:3405504-3405523 MS.gene78594:intron 40.0%
CATCAGCGCTTTATAAGGAT+TGG + chr7.4:3408310-3408329 MS.gene78594:CDS 40.0%
CCCAAGAGTTGCATATAAAG+TGG - chr7.4:3406030-3406049 None:intergenic 40.0%
CCCCAGGACATCTATTATTT+AGG - chr7.4:3403735-3403754 None:intergenic 40.0%
CTACAAAGACATATGCCAGT+AGG + chr7.4:3407786-3407805 MS.gene78594:CDS 40.0%
CTACATGCAGCTGTAAACTT+TGG + chr7.4:3408913-3408932 MS.gene78594:CDS 40.0%
CTACTCTCACTATTAGCATC+TGG - chr7.4:3406651-3406670 None:intergenic 40.0%
CTATACTTAAGAAGTGGAGC+TGG - chr7.4:3406236-3406255 None:intergenic 40.0%
GACAAAGAGACAGTATGCAT+TGG + chr7.4:3409142-3409161 MS.gene78594:CDS 40.0%
GATGATGATATAGGAACACC+AGG + chr7.4:3405920-3405939 MS.gene78594:CDS 40.0%
GCAAACAGTGAAAGAGTTGA+CGG + chr7.4:3408855-3408874 MS.gene78594:CDS 40.0%
GCATAAAATATGCAAGGTCC+GGG + chr7.4:3405503-3405522 MS.gene78594:intron 40.0%
GCATATCTAGAAGACTGGAA+TGG + chr7.4:3405842-3405861 MS.gene78594:CDS 40.0%
GCGATCAATCTAGCACAATA+AGG + chr7.4:3407513-3407532 MS.gene78594:CDS 40.0%
GCTCAAATCAAGTATCCAAG+TGG - chr7.4:3403819-3403838 None:intergenic 40.0%
GCTCACAAGAACTTTCATCA+AGG - chr7.4:3405460-3405479 None:intergenic 40.0%
GCTTAGACATCTATGTTCCA+AGG + chr7.4:3406688-3406707 MS.gene78594:CDS 40.0%
GGCATATGTCTTTGTAGAAG+TGG - chr7.4:3407783-3407802 None:intergenic 40.0%
GTCTACAACAACTTAACCAC+AGG - chr7.4:3405140-3405159 None:intergenic 40.0%
GTCTACACATTCTTCTGATG+AGG + chr7.4:3409110-3409129 MS.gene78594:CDS 40.0%
GTTGTCATCAGCGCTTTATA+AGG + chr7.4:3408305-3408324 MS.gene78594:CDS 40.0%
TACCTCTTGACAAGATCTAC+TGG - chr7.4:3408357-3408376 None:intergenic 40.0%
TATGTAGCAGTAAACGACTC+TGG + chr7.4:3407965-3407984 MS.gene78594:CDS 40.0%
TCAGAATACAGAATAGGGTG+GGG - chr7.4:3404442-3404461 None:intergenic 40.0%
TCTTGTGAGCTTATCTCAGT+TGG + chr7.4:3405470-3405489 MS.gene78594:intron 40.0%
TGAGCTTATCTCAGTTGGTT+AGG + chr7.4:3405475-3405494 MS.gene78594:intron 40.0%
TGAGTCATGAGTCATGACTA+AGG + chr7.4:3404512-3404531 MS.gene78594:intron 40.0%
TTAGGCTGGGAGGTTAATTA+AGG + chr7.4:3404482-3404501 MS.gene78594:intron 40.0%
TTCCAGTCTTCTAGATATGC+AGG - chr7.4:3405842-3405861 None:intergenic 40.0%
TTGACCCTTGAAAATGTTCC+TGG + chr7.4:3405992-3406011 MS.gene78594:CDS 40.0%
TTGAGTGCCTCATTTCTTGA+TGG + chr7.4:3403510-3403529 MS.gene78594:CDS 40.0%
TTTGAAGGCAATGGCATGAA+AGG + chr7.4:3405803-3405822 MS.gene78594:intron 40.0%
! AACGAGTTCTTCTTTTAGGC+TGG + chr7.4:3404468-3404487 MS.gene78594:intron 40.0%
! ACGAGTTCTTCTTTTAGGCT+GGG + chr7.4:3404469-3404488 MS.gene78594:intron 40.0%
! ACTTGCAAGTTAGAAGTGCA+TGG + chr7.4:3404321-3404340 MS.gene78594:intron 40.0%
! AGTTAGAAGTGCATGGGAAT+TGG + chr7.4:3404328-3404347 MS.gene78594:intron 40.0%
! CTTGAAACTTTAAGAGGCTC+TGG + chr7.4:3406266-3406285 MS.gene78594:CDS 40.0%
! CTTGCAAGTTAGAAGTGCAT+GGG + chr7.4:3404322-3404341 MS.gene78594:intron 40.0%
! GTTAGAAGTGCATGGGAATT+GGG + chr7.4:3404329-3404348 MS.gene78594:intron 40.0%
! TCGCATTTTCTTCAGCAACA+AGG + chr7.4:3406078-3406097 MS.gene78594:CDS 40.0%
! TTGGCCAGGAACATTTTCAA+GGG - chr7.4:3405999-3406018 None:intergenic 40.0%
! TTTTCAACACCATTTTCGGC+AGG - chr7.4:3407920-3407939 None:intergenic 40.0%
!! AAATGGGACTTTGAAGCCAT+TGG + chr7.4:3407829-3407848 MS.gene78594:CDS 40.0%
!! AGAGTTTGCTAGAGAAATGC+TGG + chr7.4:3407225-3407244 MS.gene78594:CDS 40.0%
!! ATTCTTTTAACTGCACCCTC+AGG - chr7.4:3406879-3406898 None:intergenic 40.0%
!! CTAATTGGTCTTTGACTGTG+TGG - chr7.4:3408386-3408405 None:intergenic 40.0%
!! CTTGTTGAGTTGATACCTCA+TGG - chr7.4:3404816-3404835 None:intergenic 40.0%
!! GGTATTGAAGCGTATTGGTT+GGG - chr7.4:3404407-3404426 None:intergenic 40.0%
!! GTATTGAAGCGTATTGGTTG+GGG - chr7.4:3404406-3404425 None:intergenic 40.0%
!! TACGTTGTTGGTTCTTTCAG+AGG + chr7.4:3408592-3408611 MS.gene78594:intron 40.0%
!! TCATGAGTTGGTGGGAAAAA+GGG + chr7.4:3403536-3403555 MS.gene78594:CDS 40.0%
!! TCTTGATGGTGTTCATGAGT+TGG + chr7.4:3403524-3403543 MS.gene78594:CDS 40.0%
!! TGTTGGTTCTTTCAGAGGAA+TGG + chr7.4:3408597-3408616 MS.gene78594:intron 40.0%
!! TTCATGAGTTGGTGGGAAAA+AGG + chr7.4:3403535-3403554 MS.gene78594:CDS 40.0%
!! TTGGAAGCATTTGACAGGTT+TGG + chr7.4:3409183-3409202 MS.gene78594:CDS 40.0%
!!! ATCTTTTTTCGGTAGTGACC+GGG - chr7.4:3405537-3405556 None:intergenic 40.0%
AAAAGCCGAACCTGACTTTG+CGG - chr7.4:3406447-3406466 None:intergenic 45.0%
AACTCCATGGCATACTTGGA+AGG - chr7.4:3408288-3408307 None:intergenic 45.0%
AATAGATCACCCGCAAAGTC+AGG + chr7.4:3406434-3406453 MS.gene78594:CDS 45.0%
AATCGACGATTACCCTTACG+CGG + chr7.4:3408660-3408679 MS.gene78594:CDS 45.0%
ACAAGAAAAACGAGCCTTGG+TGG + chr7.4:3408824-3408843 MS.gene78594:CDS 45.0%
AGAAGTGAAAGTGGCCTAAC+TGG + chr7.4:3409312-3409331 MS.gene78594:CDS 45.0%
AGCCTGCATATCTAGAAGAC+TGG + chr7.4:3405837-3405856 MS.gene78594:CDS 45.0%
ATCAGATATTGAGAGCAGCC+TGG + chr7.4:3407538-3407557 MS.gene78594:CDS 45.0%
ATCATCAGCTTATCAGCCAC+TGG + chr7.4:3407990-3408009 MS.gene78594:CDS 45.0%
ATCTACTGGCAGTGCTTGTT+CGG - chr7.4:3408343-3408362 None:intergenic 45.0%
ATGTTCGTCCAGTTCTTGGA+GGG + chr7.4:3406375-3406394 MS.gene78594:CDS 45.0%
CAAATCCTCATCAATGCAGG+TGG + chr7.4:3408240-3408259 MS.gene78594:CDS 45.0%
CATCCCAAAGGAGATCAACA+TGG + chr7.4:3407872-3407891 MS.gene78594:CDS 45.0%
CCAACTGAAAGAATGGGACA+GGG + chr7.4:3406298-3406317 MS.gene78594:CDS 45.0%
CCTGTGCCTCAAGTGATTAA+AGG + chr7.4:3406969-3406988 MS.gene78594:CDS 45.0%
CCTTTAATCACTTGAGGCAC+AGG - chr7.4:3406972-3406991 None:intergenic 45.0%
CGACAAATCCTCATCAATGC+AGG + chr7.4:3408237-3408256 MS.gene78594:CDS 45.0%
CGACTTATTGTTGGACGGTT+CGG - chr7.4:3408964-3408983 None:intergenic 45.0%
CTACTTCCCCTCTCATAATG+CGG - chr7.4:3403455-3403474 None:intergenic 45.0%
CTTGAAAATGTTCCTGGCCA+AGG + chr7.4:3405998-3406017 MS.gene78594:CDS 45.0%
CTTGAGGCACAGGATATTTG+AGG - chr7.4:3406962-3406981 None:intergenic 45.0%
CTTTACTCTAGCTAGAGCCT+TGG - chr7.4:3404768-3404787 None:intergenic 45.0%
GAATGACCGCATTATGAGAG+GGG + chr7.4:3403446-3403465 MS.gene78594:CDS 45.0%
GAGCAGAGGATAAATCTGCA+TGG + chr7.4:3407191-3407210 MS.gene78594:intron 45.0%
GATACACTGTGGCCTCTAAA+AGG - chr7.4:3408266-3408285 None:intergenic 45.0%
GATTGATCGCCGTAGACTTT+AGG - chr7.4:3407503-3407522 None:intergenic 45.0%
GCACAATTGCAGACTCTTGT+TGG + chr7.4:3409066-3409085 MS.gene78594:CDS 45.0%
GCACCATGTTGATCTCCTTT+GGG - chr7.4:3407878-3407897 None:intergenic 45.0%
GCATACTGTCTCTTTGTCCA+AGG - chr7.4:3409140-3409159 None:intergenic 45.0%
GTATCCTTCCAAGTATGCCA+TGG + chr7.4:3408281-3408300 MS.gene78594:CDS 45.0%
GTTCCAAGGGACGAAAGATT+TGG + chr7.4:3406702-3406721 MS.gene78594:CDS 45.0%
TAAACTCCGCAAGGCTTACT+TGG - chr7.4:3407282-3407301 None:intergenic 45.0%
TATGTTCGTCCAGTTCTTGG+AGG + chr7.4:3406374-3406393 MS.gene78594:CDS 45.0%
TCATCGGATCAACAACCACT+TGG + chr7.4:3403801-3403820 MS.gene78594:intron 45.0%
TCCAACTGAAAGAATGGGAC+AGG + chr7.4:3406297-3406316 MS.gene78594:CDS 45.0%
TCTTCTGATGAGGTCTACCT+TGG + chr7.4:3409120-3409139 MS.gene78594:CDS 45.0%
TGAATATCCTTACCCTCGCA+GGG + chr7.4:3406403-3406422 MS.gene78594:CDS 45.0%
TGACAACTCCATGGCATACT+TGG - chr7.4:3408292-3408311 None:intergenic 45.0%
TGACCAAATCTTTCGTCCCT+TGG - chr7.4:3406708-3406727 None:intergenic 45.0%
TGCAATCAACACATGGGTTC+AGG + chr7.4:3408705-3408724 MS.gene78594:CDS 45.0%
TGCCAGTAGATCTTGTCAAG+AGG + chr7.4:3408352-3408371 MS.gene78594:CDS 45.0%
TGTGATAGCTAAACTCCGCA+AGG - chr7.4:3407291-3407310 None:intergenic 45.0%
TTCATTGTGTCGCGGAAATG+AGG - chr7.4:3408201-3408220 None:intergenic 45.0%
TTCGGTGAGTAACCTGCAAA+AGG - chr7.4:3408946-3408965 None:intergenic 45.0%
TTGAGTTTGCCACATCCCAA+AGG + chr7.4:3407860-3407879 MS.gene78594:CDS 45.0%
TTTGCTAGAGAAATGCTGGC+TGG + chr7.4:3407229-3407248 MS.gene78594:CDS 45.0%
! AGCTTTAGCCAATTGCCAGA+TGG - chr7.4:3407945-3407964 None:intergenic 45.0%
! AGTTCTTCTTTTAGGCTGGG+AGG + chr7.4:3404472-3404491 MS.gene78594:intron 45.0%
! CTTGGCCAGGAACATTTTCA+AGG - chr7.4:3406000-3406019 None:intergenic 45.0%
! GATTTGGCGGATCCTGATAA+AGG + chr7.4:3406344-3406363 MS.gene78594:CDS 45.0%
! GGATCTAGCTTAGATGTTGG+TGG - chr7.4:3407482-3407501 None:intergenic 45.0%
! GTTAGGCCACTTTCACTTCT+AGG - chr7.4:3409312-3409331 None:intergenic 45.0%
! TATTAGTTCTTCCCCTGCGA+GGG - chr7.4:3406418-3406437 None:intergenic 45.0%
! TGATGGTGTTCATGAGTTGG+TGG + chr7.4:3403527-3403546 MS.gene78594:CDS 45.0%
!! AGCCATTGGAAGCATTTGAC+AGG + chr7.4:3409178-3409197 MS.gene78594:CDS 45.0%
!! GATGGTGTTCATGAGTTGGT+GGG + chr7.4:3403528-3403547 MS.gene78594:CDS 45.0%
!! GGGTATTGAAGCGTATTGGT+TGG - chr7.4:3404408-3404427 None:intergenic 45.0%
!! TGTTGATCTCCTTTGGGATG+TGG - chr7.4:3407872-3407891 None:intergenic 45.0%
!!! TCTTTTTTCGGTAGTGACCG+GGG - chr7.4:3405536-3405555 None:intergenic 45.0%
!! TAATATATTTATGAAATATT+TGG + chr7.4:3408414-3408433 MS.gene78594:intron 5.0%
!!! AAGTTTATTTTATTTTATTT+TGG + chr7.4:3408016-3408035 MS.gene78594:intron 5.0%
AAAGCCGAACCTGACTTTGC+GGG - chr7.4:3406446-3406465 None:intergenic 50.0%
AAGTGGATAACACCTTGGCC+AGG - chr7.4:3406013-3406032 None:intergenic 50.0%
AGGTGGGATAGAAGTTCCTG+AGG + chr7.4:3406860-3406879 MS.gene78594:CDS 50.0%
ATCACCCGCAAAGTCAGGTT+CGG + chr7.4:3406439-3406458 MS.gene78594:intron 50.0%
CAGCAACATGTGTCAGACAC+CGG + chr7.4:3407042-3407061 MS.gene78594:intron 50.0%
CCCTGTCCCATTCTTTCAGT+TGG - chr7.4:3406301-3406320 None:intergenic 50.0%
GAATATCCTTACCCTCGCAG+GGG + chr7.4:3406404-3406423 MS.gene78594:CDS 50.0%
GACATGTGATGCAGAGCCAT+TGG + chr7.4:3409164-3409183 MS.gene78594:CDS 50.0%
GATATTGAGAGCAGCCTGGA+TGG + chr7.4:3407542-3407561 MS.gene78594:CDS 50.0%
GCGACAAGAAAAACGAGCCT+TGG + chr7.4:3408821-3408840 MS.gene78594:CDS 50.0%
GCGAGGGTAAGGATATTCAC+TGG - chr7.4:3406402-3406421 None:intergenic 50.0%
GGCACCATGTTGATCTCCTT+TGG - chr7.4:3407879-3407898 None:intergenic 50.0%
GGTGGGATAGAAGTTCCTGA+GGG + chr7.4:3406861-3406880 MS.gene78594:CDS 50.0%
GTGAATATCCTTACCCTCGC+AGG + chr7.4:3406402-3406421 MS.gene78594:CDS 50.0%
GTTTACACGCCTGCCGAAAA+TGG + chr7.4:3407908-3407927 MS.gene78594:CDS 50.0%
GTTTGCATCTTTGGCCACCA+AGG - chr7.4:3408841-3408860 None:intergenic 50.0%
TCTACTGGCAGTGCTTGTTC+GGG - chr7.4:3408342-3408361 None:intergenic 50.0%
TGGAGGCCACGAATTATGAC+AGG - chr7.4:3407262-3407281 None:intergenic 50.0%
! AAAGGCCACCTGCATTGATG+AGG - chr7.4:3408248-3408267 None:intergenic 50.0%
! AGAAGTGCATGGGAATTGGG+AGG + chr7.4:3404332-3404351 MS.gene78594:intron 50.0%
! CAATGCAGGTGGCCTTTTAG+AGG + chr7.4:3408251-3408270 MS.gene78594:CDS 50.0%
! CTATTAGTTCTTCCCCTGCG+AGG - chr7.4:3406419-3406438 None:intergenic 50.0%
! GGAGCTTTTGACCGTCAGTT+CGG - chr7.4:3406941-3406960 None:intergenic 50.0%
!! AAGCGCTGATGACAACTCCA+TGG - chr7.4:3408301-3408320 None:intergenic 50.0%
!! CGTCGATTCATGCCTGAGAA+AGG + chr7.4:3408982-3409001 MS.gene78594:CDS 50.0%
!! TGAAGCGTATTGGTTGGGGT+AGG - chr7.4:3404402-3404421 None:intergenic 50.0%
ACTCCGCAAGGCTTACTTGG+AGG - chr7.4:3407279-3407298 None:intergenic 55.0%
AGGGTGGGGCTGCGAATATA+GGG - chr7.4:3404428-3404447 None:intergenic 55.0%
ATTACCCTTACGCGGTGGAC+GGG + chr7.4:3408668-3408687 MS.gene78594:CDS 55.0%
CGTCAACTGTGAGTCCATCC+AGG - chr7.4:3407559-3407578 None:intergenic 55.0%
CTACTGGCAGTGCTTGTTCG+GGG - chr7.4:3408341-3408360 None:intergenic 55.0%
GAAAGTGGCCTAACTGGTGC+AGG + chr7.4:3409318-3409337 MS.gene78594:CDS 55.0%
GATTACCCTTACGCGGTGGA+CGG + chr7.4:3408667-3408686 MS.gene78594:CDS 55.0%
TAGGGTGGGGCTGCGAATAT+AGG - chr7.4:3404429-3404448 None:intergenic 55.0%
TCACTGGACCCTCCAAGAAC+TGG - chr7.4:3406386-3406405 None:intergenic 55.0%
TGGCCTCCAAGTAAGCCTTG+CGG + chr7.4:3407273-3407292 MS.gene78594:intron 55.0%
TGGGAATGCCTGCACCAGTT+AGG - chr7.4:3409329-3409348 None:intergenic 55.0%
! GGATGGACTCACAGTTGACG+AGG + chr7.4:3407559-3407578 MS.gene78594:CDS 55.0%
! TCTAAGTGGTGGAATGCCCC+AGG - chr7.4:3403751-3403770 None:intergenic 55.0%
!! AGTGCTGATAAAGGCGACCC+TGG + chr7.4:3403576-3403595 MS.gene78594:CDS 55.0%
AAGGTCCGGGGTTCAAACCC+CGG + chr7.4:3405516-3405535 MS.gene78594:intron 60.0%
ACTTCGATCCGTGCGTCGCA+CGG + chr7.4:3403953-3403972 MS.gene78594:intron 60.0%
AGTGACCGGGGTTTGAACCC+CGG - chr7.4:3405524-3405543 None:intergenic 60.0%
CGACGATTACCCTTACGCGG+TGG + chr7.4:3408663-3408682 MS.gene78594:CDS 60.0%
GTTCTTCCCCTGCGAGGGTA+AGG - chr7.4:3406413-3406432 None:intergenic 60.0%
!! CGGTGGACGGGCTAGAGATT+TGG + chr7.4:3408680-3408699 MS.gene78594:CDS 60.0%
CTAGCCCGTCCACCGCGTAA+GGG - chr7.4:3408675-3408694 None:intergenic 65.0%
CTTCGATCCGTGCGTCGCAC+GGG + chr7.4:3403954-3403973 MS.gene78594:intron 65.0%
GATAGGACCCGTGCGACGCA+CGG - chr7.4:3403964-3403983 None:intergenic 65.0%
TCTAGCCCGTCCACCGCGTA+AGG - chr7.4:3408676-3408695 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 3403390 3409365 3403390 ID=MS.gene78594
chr7.4 mRNA 3403390 3409365 3403390 ID=MS.gene78594.t1;Parent=MS.gene78594
chr7.4 exon 3403390 3403597 3403390 ID=MS.gene78594.t1.exon1;Parent=MS.gene78594.t1
chr7.4 CDS 3403390 3403597 3403390 ID=cds.MS.gene78594.t1;Parent=MS.gene78594.t1
chr7.4 exon 3405810 3406099 3405810 ID=MS.gene78594.t1.exon2;Parent=MS.gene78594.t1
chr7.4 CDS 3405810 3406099 3405810 ID=cds.MS.gene78594.t1;Parent=MS.gene78594.t1
chr7.4 exon 3406212 3406455 3406212 ID=MS.gene78594.t1.exon3;Parent=MS.gene78594.t1
chr7.4 CDS 3406212 3406455 3406212 ID=cds.MS.gene78594.t1;Parent=MS.gene78594.t1
chr7.4 exon 3406652 3406990 3406652 ID=MS.gene78594.t1.exon4;Parent=MS.gene78594.t1
chr7.4 CDS 3406652 3406990 3406652 ID=cds.MS.gene78594.t1;Parent=MS.gene78594.t1
chr7.4 exon 3407197 3407282 3407197 ID=MS.gene78594.t1.exon5;Parent=MS.gene78594.t1
chr7.4 CDS 3407197 3407282 3407197 ID=cds.MS.gene78594.t1;Parent=MS.gene78594.t1
chr7.4 exon 3407473 3407580 3407473 ID=MS.gene78594.t1.exon6;Parent=MS.gene78594.t1
chr7.4 CDS 3407473 3407580 3407473 ID=cds.MS.gene78594.t1;Parent=MS.gene78594.t1
chr7.4 exon 3407707 3408011 3407707 ID=MS.gene78594.t1.exon7;Parent=MS.gene78594.t1
chr7.4 CDS 3407707 3408011 3407707 ID=cds.MS.gene78594.t1;Parent=MS.gene78594.t1
chr7.4 exon 3408110 3408373 3408110 ID=MS.gene78594.t1.exon8;Parent=MS.gene78594.t1
chr7.4 CDS 3408110 3408373 3408110 ID=cds.MS.gene78594.t1;Parent=MS.gene78594.t1
chr7.4 exon 3408612 3409365 3408612 ID=MS.gene78594.t1.exon9;Parent=MS.gene78594.t1
chr7.4 CDS 3408612 3409365 3408612 ID=cds.MS.gene78594.t1;Parent=MS.gene78594.t1
Gene Sequence

>MS.gene78594

ATGTTTCATAACATTATGAACGTCCTTAGCATCCATGATGATAATAATAAGAACAAGAATGACCGCATTATGAGAGGGGAAGTAGTATTGATGAAGAAAAATGTGTTGGATTTTAAGGATTTGAGTGCCTCATTTCTTGATGGTGTTCATGAGTTGGTGGGAAAAAGGGTTTCTCTCCAACTTGTAAGTGCTGATAAAGGCGACCCTGGTTAGTATTTTCATCCTCATACTTTGTTCTTTCTCCTTCTTTTTTTCCCTAGAAAAATTTCTCCTTTTACAATTAATCATGTTTATTTCTCTTTTTGTTATCATCCATAACCCACTATAATGAGTATTTTTGACCCTAAATAATAGATGTCCTGGGGCATTCCACCACTTAGACTATTTAATTTAGATTTACTATGAGATGAATCATCGGATCAACAACCACTTGGATACTTGATTTGAGCTTAGTTCAAAGTCAATGCAAAACATTGTCTTATTCTTGTGTTTGACACATAAATATTAAAACCTTTGATTTTGAATAGAAAAAAAATAATAGTTTAAGTTAAATGAAAACTAGAACTTCGATCCGTGCGTCGCACGGGTCCTATCAACTATAATAAAGATCAATAAGCTATATTATATATTTTCGTTGATGTTAAATAAGTTATAAAAAAAAATTGATCAATAAGCTAATTTTATTTAATCTATTCGATGTCATAACAAATTAATGTTTTATGTCTTATATGAAAATTTATTTCATAAAATACGTGTTATTACAAAATAAATTTTAAATAAAATATTTTAAAAAATAATACCATTATTCAAAATTTAAACCACTAATTTTTTTCCTTATATTCAAAATTTGATTAGAGTTCTTCTACAAACCCTTAGAAGATTTGATTTCTTCTTCTTCTTTTTTGAATGCTTGTGAAAGTTCTAATGCATTACTTGCAAGTTAGAAGTGCATGGGAATTGGGAGGACATGATAAATAAAATATCTAAGGATGAAATAGTAAAATCACTTCCTACCCCAACCAATACGCTTCAATACCCTATATTCGCAGCCCCACCCTATTCTGTATTCTGAAAATTCAACGAGTTCTTCTTTTAGGCTGGGAGGTTAATTAAGGTTTCTCATGAGTCATGAGTCATGACTAAGGTGAAACCAATATGGGTTAGGAAAGAAAAACTCATTTCTTTATTAGAAAAAATTAATGTAAGTTATATTCTTTAAATATATTATACACATGTATTCCTTTGTATTTGAAAATATATGCTACGATATAAATATATTTTTTGGACAATATCGTGTAAATATATTTTAAAGAGTAATATTATGATATAATTAATAAATTGATGAAATATTTATTGCATTTCTTTTAGAAAATAGCCAAGGCTCTAGCTAGAGTAAAGCTGCAAATTAACTTATTATAATTGTCCATGAGGTATCAACTCAACAAGAGCTTGACATTATACTCAAAGAAAGAAGTTCAAATCTCAACTAAAACATCTATAAAATGACAATTGGTGACACTGTTATTAACATTAATAATAATTTACAATTACAATTCCCCACTTGCTTTTTTAAATTGTTAGTATTATAATTTTCTGCATAGGTGATATAAAATGCACATGTGTACATAAGTAAGAGATAAAGAATACAGTCGACCAATTTAGACTTAGATATTTCACCCTGTTTTAAATGCAATCTCTAAAATATATAAAAATAAAAAATAGTCATTAAATTAAATAAAATTGCATCCCTGTGGTTAAGTTGTTGTAGACTATATGAGACAATTTTTCATATACTTGAGATTAAAAGACATATTTGGTACACTTTAAGAATGAATTGTTATTTTATGTACTTTTGATTGTAAATTTGAGAGATTATAATGATCCTTCAGAGATTAAATTGAGAGTTTATTGTTGTTAAAAAAAAAATAGAGAGTTTATTAATTAAAGAATAAAATAGAAAAATACTTAGAGAAATTTAATACCGATTAAACCATTAAATGTAGTAATCATTACCATTTAATTACCAATATTATGTAAATTTTGGGTTATGTGAGTATTAAATTATTACCTTGATGAAAGTTCTTGTGAGCTTATCTCAGTTGGTTAGGACAATGCATAAAATATGCAAGGTCCGGGGTTCAAACCCCGGTCACTACCGAAAAAAGATATGCTCATATTAATATCATTTTTGTAAAAGGAGTTTCTCTTACAAGTCACAGAGTAAAGAGTTCACTTTAGATAAAAAATAATAATACAACTTTAATTTACCAAACTTAATTTTTCTATACTGTTAATTTAATTTAATATAACCCTTAAAAAAATTAATATAAATATAATACTTACCAAGAAAACTATCTTTGAATAATGCTTTATTTACCATATGTTAAGCCTGAATGGTATTATGATCATAAATTTTGAAGGCAATGGCATGAAAGGAAAAGTTGGGAAGCCTGCATATCTAGAAGACTGGAATGGCACAATCACACCCTTAATAGCTGGTGAATCAACATACAAGGTTACATTTGATTTGGATGATGATATAGGAACACCAGGAGCATTTCTAATTAAGAATAATCATCACAGTGAGTTCTACCTAAAAAGCTTGACCCTTGAAAATGTTCCTGGCCAAGGTGTTATCCACTTTATATGCAACTCTTGGGTATACCCTTCTCAAAAATATCAAAAGGATCGCATTTTCTTCAGCAACAAGGTATAGAGAAGAAAAATATATTAACTTTTCATCTAATAATTTGTATTTGAGGTTTATAATAATTAGGGACCTTGAACTATAGTACTAATTACATATTGTTAATGTGTTGCAGACATACTTTCTAAGTGAAACACCAGCTCCACTTCTTAAGTATAGAGAAGAAGAACTTGAAACTTTAAGAGGCTCTGGAGATAGCATCCAACTGAAAGAATGGGACAGGGTATATGATTATGCATACTATAATGATTTGGCGGATCCTGATAAAGGTCCGAAATATGTTCGTCCAGTTCTTGGAGGGTCCAGTGAATATCCTTACCCTCGCAGGGGAAGAACTAATAGATCACCCGCAAAGTCAGGTTCGGCTTTTCCACAATGATCACCAGTTTATTAATTATGTACTCGCAATTAATATATTTTTCTTACACATGCATTCAATCATATTCCATTATAGTTTACTTCAGAAAGATGTGATTGAAAGACAATTAGTCCTGCCTATTATGGTTAGAAATTTCTAATGTGGTGATTTATTTATTTTGTTGATAATATTTCCAGATGCTAATAGTGAGAGTAGATTGAATCTTGCCATGAGCTTAGACATCTATGTTCCAAGGGACGAAAGATTTGGTCACGTGAAAATGTCAGACTTTCTTGCTTATGCAATTAAAGCTATAGTTCAAGTTATCAAACCTGAACTAGAATCACTATTTGATAGCACTCCTAATGAGTTTGATAGCTTTGAAGATGTACTTAAACTCTATGAAGGTGGGATAGAAGTTCCTGAGGGTGCAGTTAAAAGAATTAGGGATAAAATCCCTGCTGAAATGCTCAAAGAAATTCTCCGAACTGACGGTCAAAAGCTCCTCAAATATCCTGTGCCTCAAGTGATTAAAGGTATTTTAGATGTATGTAGTGTTTGAATGTAACTACATGTGTAATGTCAGACAGCAACATGTGTCAGACACCGGATACATGTTCGTTATGAAGTGTTGGTGCTACATAGATTTTTACCTATTATATTGCATACCATAATCAAGAAAAGTCATGCATTTTGCAAACCATTATTGTATTGTAATGGCACTCTTAATGATTTTGAGCAGAGGATAAATCTGCATGGAGAACTGATGAAGAGTTTGCTAGAGAAATGCTGGCTGGTGTAAATCCTGTCATAATTCGTGGCCTCCAAGTAAGCCTTGCGGAGTTTAGCTATCACAATTTCTTAAAATACATTGTTTTCCAAAAGAAAATTGTATTTTTCTTATACTTATAAGTTATGATTACCCAAATTTATTTCCTGAAACTTAAGAGACTCACTAGTCAAATAAATCATGGACTATATTGTCCCCTCACATTTGTCCTTATTAATTAAATTGCAGGAATTTCCACCAACATCTAAGCTAGATCCTAAAGTCTACGGCGATCAATCTAGCACAATAAGGAAATCAGATATTGAGAGCAGCCTGGATGGACTCACAGTTGACGAGGCAATTTTCAAATTTGATATGATATTCTGTTTTGATCATACAATTTTCTTTGAATTTTGTGACAACTTTGCAGTCAAATTCAATTCATTTTTTTTAATCTAATCTAATTATTCATTGTGTTAATAGGCAGTTGCACAAAAGAAGTTGTTTATATTGGATCACCATGATGCACTTATGACATACTTGAGGAGGATAAATTCCACTTCTACAAAGACATATGCCAGTAGGACAATTCTTTTTCTGCAACAAAATGGGACTTTGAAGCCATTGGCGATTGAATTGAGTTTGCCACATCCCAAAGGAGATCAACATGGTGCCATTAGTAATGTTTACACGCCTGCCGAAAATGGTGTTGAAAATTCCATCTGGCAATTGGCTAAAGCTTATGTAGCAGTAAACGACTCTGGTTATCATCAGCTTATCAGCCACTGGTATAAGTTTATTTTATTTTATTTTGGCAAAATTACTTCTATGGTCCCTTAGCACTCAAGTTTTCCTTATATTATATATTTCATGTTGTATATCACAGGTTGCATACTCATGCGTCGATTGAGCCATTCATTATATCTGCAAACAGACAACTTAGTGTTCTTCACCCCATTCATAAACTATTGCATCCTCATTTCCGCGACACAATGAATATAAATGCACTTGCGCGACAAATCCTCATCAATGCAGGTGGCCTTTTAGAGGCCACAGTGTATCCTTCCAAGTATGCCATGGAGTTGTCATCAGCGCTTTATAAGGATTGGACTTTCCCCGAACAAGCACTGCCAGTAGATCTTGTCAAGAGGTAAACAGACCACACAGTCAAAGACCAATTAGACCATCACTAATATATTTATGAAATATTTGGCTAAACAACTTAACTGAGTATTCATAAAAGATCCTTTGTGAATTATTATTATTTTTATGTTTTGTTAACATTCCGGTTTCTAAGATAAAGGAGCTTAGTAATCTAGAATTTGGCCGTTGTAAGTAAAGATCCATTTTTTTATGATCATGAACTGATACGTTGTTGGTTCTTTCAGAGGAATGGCAATTAAAGATTCAGCATCTCCGTATGGACTTCGACTAATAATCGACGATTACCCTTACGCGGTGGACGGGCTAGAGATTTGGTTTGCAATCAACACATGGGTTCAGGACTATTGTTCCTTTTACTACAAGAATGATGACACGGTAAAGAAAGATGCAGAACTACAATCTTGGTGGAAGGAATTAATACAAGAAGGACACGGCGACAAGAAAAACGAGCCTTGGTGGCCAAAGATGCAAACAGTGAAAGAGTTGACGGAAACTTGCACAATCATTATATGGATTGCTTCAGCTCTACATGCAGCTGTAAACTTTGGACAATATCCTTTTGCAGGTTACTCACCGAACCGTCCAACAATAAGTCGTCGATTCATGCCTGAGAAAGGAACTATAGAGTATGATGAAGTTGTGACAAATCCCGATAAAGCTTTTTTGAAAACAATCACCGCACAATTGCAGACTCTTGTTGGCATTTCGCTTATTGAAATTTTGTCTACACATTCTTCTGATGAGGTCTACCTTGGACAAAGAGACAGTATGCATTGGACATGTGATGCAGAGCCATTGGAAGCATTTGACAGGTTTGGAAAGAAACTGAAAGAAATTGAAGAGAGAATTGTAGCTATGAATGATGATGTGAATCTCAAAAATCGAGTTGGACCTGTTAAAATGCCATACACTTTGCTTTATCCTAGAAGTGAAAGTGGCCTAACTGGTGCAGGCATTCCCAATAGTGTCTCCATTTGA
Protein sequence

>MS.gene78594.t1

MFHNIMNVLSIHDDNNKNKNDRIMRGEVVLMKKNVLDFKDLSASFLDGVHELVGKRVSLQLVSADKGDPGNGMKGKVGKPAYLEDWNGTITPLIAGESTYKVTFDLDDDIGTPGAFLIKNNHHSEFYLKSLTLENVPGQGVIHFICNSWVYPSQKYQKDRIFFSNKTYFLSETPAPLLKYREEELETLRGSGDSIQLKEWDRVYDYAYYNDLADPDKGPKYVRPVLGGSSEYPYPRRGRTNRSPAKSDANSESRLNLAMSLDIYVPRDERFGHVKMSDFLAYAIKAIVQVIKPELESLFDSTPNEFDSFEDVLKLYEGGIEVPEGAVKRIRDKIPAEMLKEILRTDGQKLLKYPVPQVIKEDKSAWRTDEEFAREMLAGVNPVIIRGLQEFPPTSKLDPKVYGDQSSTIRKSDIESSLDGLTVDEAVAQKKLFILDHHDALMTYLRRINSTSTKTYASRTILFLQQNGTLKPLAIELSLPHPKGDQHGAISNVYTPAENGVENSIWQLAKAYVAVNDSGYHQLISHWLHTHASIEPFIISANRQLSVLHPIHKLLHPHFRDTMNINALARQILINAGGLLEATVYPSKYAMELSSALYKDWTFPEQALPVDLVKRGMAIKDSASPYGLRLIIDDYPYAVDGLEIWFAINTWVQDYCSFYYKNDDTVKKDAELQSWWKELIQEGHGDKKNEPWWPKMQTVKELTETCTIIIWIASALHAAVNFGQYPFAGYSPNRPTISRRFMPEKGTIEYDEVVTNPDKAFLKTITAQLQTLVGISLIEILSTHSSDEVYLGQRDSMHWTCDAEPLEAFDRFGKKLKEIEERIVAMNDDVNLKNRVGPVKMPYTLLYPRSESGLTGAGIPNSVSI