Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78599.t1 | RHN49285.1 | 88.7 | 680 | 39 | 2 | 11 | 653 | 51 | 729 | 8.30E-302 | 1045.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78599.t1 | F4K4C5 | 52.9 | 722 | 249 | 14 | 3 | 649 | 46 | 751 | 4.3e-174 | 612.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78599.t1 | G7KYP0 | 88.5 | 680 | 40 | 2 | 11 | 653 | 51 | 729 | 6.0e-302 | 1045.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050872 | MS.gene78599 | 0.977094 | 4.24E-143 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 159 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACACGCGTGGCAAAATTT+AGG | 0.187828 | 7.4:+3228947 | None:intergenic |
| TCAATTGCTGATGTTGTTAT+TGG | 0.214514 | 7.4:+3228145 | None:intergenic |
| TTTAAAGTCTGTTCAGCTTC+TGG | 0.226117 | 7.4:-3231284 | MS.gene78599:CDS |
| CAACAAGTCCTGGGACTTCT+TGG | 0.232988 | 7.4:+3229852 | None:intergenic |
| CTTGTGCTTCAGTCCTTTCC+TGG | 0.235574 | 7.4:-3231316 | MS.gene78599:CDS |
| TTTGGTGCGGGTAACTGTTA+TGG | 0.261932 | 7.4:-3229459 | MS.gene78599:CDS |
| CTACTGAACTAGGACTTATT+TGG | 0.263050 | 7.4:+3228992 | None:intergenic |
| CTCATGCAGCTCTTCGTTAC+AGG | 0.277915 | 7.4:-3228401 | MS.gene78599:CDS |
| CAATTGCTGATGTTGTTATT+GGG | 0.289850 | 7.4:+3228146 | None:intergenic |
| TGAGAAGCAGAAGTAGTTTC+AGG | 0.290147 | 7.4:+3228244 | None:intergenic |
| GTAAGGAATGTGGGCTGATT+TGG | 0.303796 | 7.4:+3229268 | None:intergenic |
| TCGACTTTCTTGCTTTAATC+TGG | 0.310196 | 7.4:+3228534 | None:intergenic |
| AAAACAAAGATCATCGCATT+TGG | 0.327447 | 7.4:+3227921 | None:intergenic |
| CATGTACCTTGATTATCTTC+AGG | 0.330292 | 7.4:+3230930 | None:intergenic |
| TGAGGAATTATTTCGGATTT+CGG | 0.338752 | 7.4:-3230661 | MS.gene78599:CDS |
| TTGGTGCGGGTAACTGTTAT+GGG | 0.342445 | 7.4:-3229458 | MS.gene78599:CDS |
| CTTGTTGAAACACATGTTTA+TGG | 0.348802 | 7.4:-3229836 | MS.gene78599:CDS |
| AACACGCGTGGCAAAATTTA+GGG | 0.363352 | 7.4:+3228948 | None:intergenic |
| AAACCTTGTCTTGAAGATTT+CGG | 0.364530 | 7.4:+3228672 | None:intergenic |
| GAACTCTTGAGGAATTATTT+CGG | 0.373378 | 7.4:-3230668 | MS.gene78599:CDS |
| AATCAGCCCACATTCCTTAC+AGG | 0.373753 | 7.4:-3229265 | MS.gene78599:intron |
| AACAAGTCCTGGGACTTCTT+GGG | 0.381249 | 7.4:+3229853 | None:intergenic |
| TTAAAGTCTGTTCAGCTTCT+GGG | 0.382271 | 7.4:-3231283 | MS.gene78599:intron |
| TTACCTGAGCTTTGGTACTT+AGG | 0.382785 | 7.4:+3231488 | None:intergenic |
| GCCCTTCTCTCGGGTGGTGG+AGG | 0.387542 | 7.4:+3228427 | None:intergenic |
| CGTTGCAGTGCAATCACAGC+TGG | 0.389235 | 7.4:+3228028 | None:intergenic |
| AATTGAGACAACCCCGGCTT+TGG | 0.393958 | 7.4:-3228128 | MS.gene78599:CDS |
| GAGGACATCACTGATTCCTT+TGG | 0.399843 | 7.4:-3228485 | MS.gene78599:CDS |
| TTTATAATTTACCTGAGCTT+TGG | 0.402686 | 7.4:+3231480 | None:intergenic |
| GCCTAGGAGGCGAGTTTCCC+TGG | 0.406610 | 7.4:-3228278 | MS.gene78599:CDS |
| AGCAGCAGCAGTAGGTTTGA+TGG | 0.407911 | 7.4:-3228100 | MS.gene78599:CDS |
| TTTATGGAGCAGATGGTGTT+TGG | 0.409893 | 7.4:-3229820 | MS.gene78599:CDS |
| GAGGCCCTTCTCTCGGGTGG+TGG | 0.415104 | 7.4:+3228424 | None:intergenic |
| CATGAGGAGGCCCTTCTCTC+GGG | 0.416776 | 7.4:+3228418 | None:intergenic |
| GCATGAGGAGGCCCTTCTCT+CGG | 0.422629 | 7.4:+3228417 | None:intergenic |
| GTTTGGGAAATTCTGAAGTC+TGG | 0.431180 | 7.4:-3229803 | MS.gene78599:CDS |
| AGCTTAGCAGCCGTTCTCAT+TGG | 0.435751 | 7.4:-3229742 | MS.gene78599:intron |
| AAACAAAGATCATCGCATTT+GGG | 0.440391 | 7.4:+3227922 | None:intergenic |
| TTCCTTTGGTTCCTTACCAT+CGG | 0.440805 | 7.4:+3228193 | None:intergenic |
| TTGAATACCGAGCTTTCCTT+TGG | 0.443272 | 7.4:+3228179 | None:intergenic |
| TTATGGAGCAGATGGTGTTT+GGG | 0.446128 | 7.4:-3229819 | MS.gene78599:CDS |
| AATGAAAATGAAATTGCAAA+TGG | 0.450622 | 7.4:-3231056 | MS.gene78599:CDS |
| TTGGTGGTCATTGCTTCCAT+TGG | 0.450837 | 7.4:+3228216 | None:intergenic |
| TGAAAAGATAAAAGATCTCT+TGG | 0.457652 | 7.4:-3230580 | MS.gene78599:CDS |
| TTTCAGGTTTGAGTGTTGCC+AGG | 0.459998 | 7.4:+3228260 | None:intergenic |
| TGAATTGCTTGTTAGTATGT+TGG | 0.460324 | 7.4:-3230613 | MS.gene78599:CDS |
| ACATGTGTTTCAACAAGTCC+TGG | 0.461509 | 7.4:+3229842 | None:intergenic |
| CTTTGGTTAGTTGACTTAGC+TGG | 0.465565 | 7.4:-3229398 | MS.gene78599:CDS |
| CGTGAATCTGCAGCCTGTGT+TGG | 0.468144 | 7.4:+3228073 | None:intergenic |
| AGTCATCACTCTTGCCATCT+CGG | 0.474964 | 7.4:-3227952 | MS.gene78599:CDS |
| TGCCTCCACCACCCGAGAGA+AGG | 0.476491 | 7.4:-3228429 | MS.gene78599:CDS |
| AATTATTAATTCTTCTCAGT+GGG | 0.477488 | 7.4:+3228455 | None:intergenic |
| AAAGGAAAGCTCGGTATTCA+AGG | 0.477901 | 7.4:-3228177 | MS.gene78599:CDS |
| AGGTCTACTTGCTTTCGAGC+TGG | 0.478063 | 7.4:+3228907 | None:intergenic |
| GCCTCCACCACCCGAGAGAA+GGG | 0.485303 | 7.4:-3228428 | MS.gene78599:CDS |
| TAGTTAACTCCTCTATGCTC+TGG | 0.486518 | 7.4:+3230693 | None:intergenic |
| CAATGAAGTGATTGAACTCA+AGG | 0.486736 | 7.4:-3231114 | MS.gene78599:CDS |
| TTTGGTTCCTTACCATCGGT+TGG | 0.487126 | 7.4:+3228197 | None:intergenic |
| CATATACTTCAGAGCTCGTT+AGG | 0.487966 | 7.4:-3229127 | MS.gene78599:intron |
| GCTAAGCTCGTTAGCACTTG+TGG | 0.494314 | 7.4:+3229757 | None:intergenic |
| CAAGTTTCACTTGTTCGCTA+AGG | 0.495516 | 7.4:+3231335 | None:intergenic |
| AAAGTCCAAACACGATGAAA+AGG | 0.501976 | 7.4:-3228762 | MS.gene78599:CDS |
| TTGGGAGTGTATGACCGTCC+TGG | 0.503371 | 7.4:+3231529 | None:intergenic |
| CAGCTCTTCGTTACAGGGAA+AGG | 0.504216 | 7.4:-3228395 | MS.gene78599:CDS |
| GGCTGCAGATTCACGGATGA+TGG | 0.504352 | 7.4:-3228065 | MS.gene78599:CDS |
| TTCGCTCCGAGGACACATCT+AGG | 0.509956 | 7.4:+3231147 | None:intergenic |
| AAGATAAAAGATCTCTTGGC+AGG | 0.512488 | 7.4:-3230576 | MS.gene78599:CDS |
| TGGATAAAAGCAGCAGCAGT+AGG | 0.518891 | 7.4:-3228108 | MS.gene78599:CDS |
| ACTAATGAAATGCAGGTTGG+AGG | 0.525868 | 7.4:-3229897 | MS.gene78599:intron |
| GATCATCGCATTTGGGTGGA+AGG | 0.526152 | 7.4:+3227929 | None:intergenic |
| AAGTTTCACTTGTTCGCTAA+GGG | 0.527309 | 7.4:+3231336 | None:intergenic |
| TGTGGCTAGTCTCATTTGTA+CGG | 0.531966 | 7.4:+3228709 | None:intergenic |
| TGACCTAAGTACCAAAGCTC+AGG | 0.532095 | 7.4:-3231491 | MS.gene78599:intron |
| CAGATTCACGGATGATGGCT+AGG | 0.534804 | 7.4:-3228060 | MS.gene78599:CDS |
| TGTGCTTGCGACGGTGCAGC+CGG | 0.535277 | 7.4:+3228310 | None:intergenic |
| GGTTCCTTACCATCGGTTGG+TGG | 0.535399 | 7.4:+3228200 | None:intergenic |
| GAGGTCAAGCAAGCTGCAGA+TGG | 0.535517 | 7.4:-3229878 | MS.gene78599:CDS |
| GCTCTTGAAGTACAAGCAAA+TGG | 0.535914 | 7.4:-3228878 | MS.gene78599:intron |
| ATCCATTGCTGCAAGACCAC+CGG | 0.536001 | 7.4:-3228329 | MS.gene78599:CDS |
| GCCAGGGAAACTCGCCTCCT+AGG | 0.536949 | 7.4:+3228277 | None:intergenic |
| AGAATTACCTGTAAGGAATG+TGG | 0.537105 | 7.4:+3229258 | None:intergenic |
| ACCAAAGAGAATTACCTGTA+AGG | 0.538877 | 7.4:+3229251 | None:intergenic |
| TCTGTTAAGTCTACTGAACT+AGG | 0.539172 | 7.4:+3228982 | None:intergenic |
| TAGTGTGGAGTCCTCTCAAA+CGG | 0.539469 | 7.4:-3227997 | MS.gene78599:CDS |
| ATGACCACCAACCGATGGTA+AGG | 0.540304 | 7.4:-3228204 | MS.gene78599:CDS |
| TCGGCACATGAATTCTCTTG+TGG | 0.546028 | 7.4:+3228691 | None:intergenic |
| GGAAACAGAGTCAGATCAGT+TGG | 0.549331 | 7.4:-3229782 | MS.gene78599:CDS |
| TTCAGGTTTGAGTGTTGCCA+GGG | 0.549993 | 7.4:+3228261 | None:intergenic |
| TTGCTTGTACTTCAAGAGCT+CGG | 0.551387 | 7.4:+3228882 | None:intergenic |
| CAACACAGGCTGCAGATTCA+CGG | 0.551599 | 7.4:-3228072 | MS.gene78599:CDS |
| TGTGGGCTGATTTGGAAGCA+AGG | 0.552964 | 7.4:+3229276 | None:intergenic |
| TTCAAACCTGAAGATAATCA+AGG | 0.556589 | 7.4:-3230936 | MS.gene78599:intron |
| AGCCGGTGGTCTTGCAGCAA+TGG | 0.556985 | 7.4:+3228327 | None:intergenic |
| TCATGCAGCTCTTCGTTACA+GGG | 0.558786 | 7.4:-3228400 | MS.gene78599:CDS |
| AAACTGAAGCTGAAGGAGAA+AGG | 0.563697 | 7.4:-3229358 | MS.gene78599:CDS |
| ACTCGCCTCCTAGGCTGAAG+AGG | 0.565177 | 7.4:+3228286 | None:intergenic |
| ATTGCTTGTTAGTATGTTGG+AGG | 0.566657 | 7.4:-3230610 | MS.gene78599:CDS |
| ATTTGGGTGGAAGGCCGAGA+TGG | 0.566713 | 7.4:+3227938 | None:intergenic |
| GAATTACCTGTAAGGAATGT+GGG | 0.568015 | 7.4:+3229259 | None:intergenic |
| TAAAACATCTAGACCAGGAA+AGG | 0.569010 | 7.4:+3231303 | None:intergenic |
| TCTGCTTCTCAATTGACCAA+TGG | 0.572488 | 7.4:-3228232 | MS.gene78599:CDS |
| AAATGAAATTGCAAATGGAT+CGG | 0.573487 | 7.4:-3231051 | MS.gene78599:CDS |
| CGGATTTCGGAAGAGAGACA+AGG | 0.573708 | 7.4:-3230648 | MS.gene78599:CDS |
| AAGCACAACCTCTTCAGCCT+AGG | 0.576880 | 7.4:-3228294 | MS.gene78599:CDS |
| TTATTAATTCTTCTCAGTGG+GGG | 0.577665 | 7.4:+3228457 | None:intergenic |
| TCTCTCGGGTGGTGGAGGCA+AGG | 0.577953 | 7.4:+3228432 | None:intergenic |
| CACAACCTCTTCAGCCTAGG+AGG | 0.579350 | 7.4:-3228291 | MS.gene78599:CDS |
| TGGGAGTGTATGACCGTCCT+GGG | 0.579932 | 7.4:+3231530 | None:intergenic |
| TCGATACCTCTCCGTTTGAG+AGG | 0.582379 | 7.4:+3227986 | None:intergenic |
| AATTGCTGATGTTGTTATTG+GGG | 0.585918 | 7.4:+3228147 | None:intergenic |
| TAGATGTGTCCTCGGAGCGA+AGG | 0.586583 | 7.4:-3231145 | MS.gene78599:CDS |
| AAAGTACCTAGATGTGTCCT+CGG | 0.591411 | 7.4:-3231153 | MS.gene78599:CDS |
| TTGCTGAGAAGACAATAAAG+AGG | 0.593487 | 7.4:-3228504 | MS.gene78599:CDS |
| CAAAGATCATCGCATTTGGG+TGG | 0.597014 | 7.4:+3227925 | None:intergenic |
| CTCAATTCCTCGAACACGCG+TGG | 0.601659 | 7.4:+3228936 | None:intergenic |
| AGAACCAGATTGCGGAGGAG+AGG | 0.603839 | 7.4:-3228561 | MS.gene78599:CDS |
| GTTGCAGTGCAATCACAGCT+GGG | 0.604648 | 7.4:+3228029 | None:intergenic |
| ATGTGTCCTCGGAGCGAAGG+AGG | 0.607083 | 7.4:-3231142 | MS.gene78599:CDS |
| AATGAAGTGATTGAACTCAA+GGG | 0.608737 | 7.4:-3231113 | MS.gene78599:CDS |
| CATGTGTTTCAACAAGTCCT+GGG | 0.609823 | 7.4:+3229843 | None:intergenic |
| GAGGAGGCCCTTCTCTCGGG+TGG | 0.611467 | 7.4:+3228421 | None:intergenic |
| GATGGAACCCAAGAAGTCCC+AGG | 0.612191 | 7.4:-3229860 | MS.gene78599:CDS |
| AGCTGAAGGAGAAAGGCTGA+AGG | 0.613897 | 7.4:-3229351 | MS.gene78599:CDS |
| AACACGATGAAAAGGAAGCT+AGG | 0.614405 | 7.4:-3228754 | MS.gene78599:CDS |
| TAAGGAACCAAAGGAAAGCT+CGG | 0.615216 | 7.4:-3228186 | MS.gene78599:CDS |
| AATAAGTCTCTATCATCACT+TGG | 0.616727 | 7.4:-3229314 | MS.gene78599:CDS |
| TGAAGAGGTTGTGCTTGCGA+CGG | 0.623071 | 7.4:+3228301 | None:intergenic |
| GTGCCGAAATCTTCAAGACA+AGG | 0.624278 | 7.4:-3228675 | MS.gene78599:intron |
| TGGTGCGGGTAACTGTTATG+GGG | 0.625570 | 7.4:-3229457 | MS.gene78599:CDS |
| GTTTGATGGCAGTCCAACAC+AGG | 0.626420 | 7.4:-3228086 | MS.gene78599:CDS |
| AGTTAACTATAGAACTCTTG+AGG | 0.627616 | 7.4:-3230679 | MS.gene78599:CDS |
| AACCGATGGTAAGGAACCAA+AGG | 0.628330 | 7.4:-3228195 | MS.gene78599:CDS |
| CCAAGACATACCAATGAGAA+CGG | 0.631004 | 7.4:+3229732 | None:intergenic |
| GTTAAGCCTCCTTCGCTCCG+AGG | 0.635693 | 7.4:+3231136 | None:intergenic |
| AGTGCAATCACAGCTGGGTG+CGG | 0.636196 | 7.4:+3228034 | None:intergenic |
| GTGGGCTGATTTGGAAGCAA+GGG | 0.637924 | 7.4:+3229277 | None:intergenic |
| GAAGGAACACCAGAGCATAG+AGG | 0.638620 | 7.4:-3230702 | MS.gene78599:intron |
| TGCAACGCAAATCTTTAGTG+TGG | 0.638843 | 7.4:-3228012 | MS.gene78599:CDS |
| ACACATGTTTATGGAGCAGA+TGG | 0.639308 | 7.4:-3229827 | MS.gene78599:CDS |
| TAACGAAGAGCTGCATGAGG+AGG | 0.639630 | 7.4:+3228405 | None:intergenic |
| ATTATTAATTCTTCTCAGTG+GGG | 0.640491 | 7.4:+3228456 | None:intergenic |
| GTAGGTAAAACTGAAGCTGA+AGG | 0.640979 | 7.4:-3229365 | MS.gene78599:CDS |
| CAGCTAAGTCAACTAACCAA+AGG | 0.642070 | 7.4:+3229399 | None:intergenic |
| GAATTATTAATTCTTCTCAG+TGG | 0.646017 | 7.4:+3228454 | None:intergenic |
| GACTTTAAAACATCTAGACC+AGG | 0.649322 | 7.4:+3231298 | None:intergenic |
| AATACTATGTCAACCCAGGA+CGG | 0.655878 | 7.4:-3231543 | MS.gene78599:CDS |
| CGTGTTCGAGGAATTGAGAG+TGG | 0.659833 | 7.4:-3228931 | MS.gene78599:CDS |
| GGTGCGGGTAACTGTTATGG+GGG | 0.663098 | 7.4:-3229456 | MS.gene78599:CDS |
| GCTTGCGACGGTGCAGCCGG+TGG | 0.665066 | 7.4:+3228313 | None:intergenic |
| AAGCAATGACCACCAACCGA+TGG | 0.670139 | 7.4:-3228209 | MS.gene78599:CDS |
| TTAGCTGGCAGTGAGCGTGT+AGG | 0.673666 | 7.4:-3229383 | MS.gene78599:CDS |
| CTGTAACGAAGAGCTGCATG+AGG | 0.675168 | 7.4:+3228402 | None:intergenic |
| GGATCTCGAGAACCAGATTG+CGG | 0.682100 | 7.4:-3228569 | MS.gene78599:CDS |
| TCTCGAGAACCAGATTGCGG+AGG | 0.684127 | 7.4:-3228566 | MS.gene78599:CDS |
| ATCAGCAATTGAGACAACCC+CGG | 0.689890 | 7.4:-3228134 | MS.gene78599:CDS |
| TGAGAATACTATGTCAACCC+AGG | 0.699054 | 7.4:-3231547 | None:intergenic |
| TGGAGTCCTCTCAAACGGAG+AGG | 0.703962 | 7.4:-3227992 | MS.gene78599:CDS |
| TGTACTTCAAGAGCTCGGTG+AGG | 0.713267 | 7.4:+3228887 | None:intergenic |
| GTTACAGGGAAAGGAAAACA+CGG | 0.737716 | 7.4:-3228386 | MS.gene78599:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATTATAAGAATTAGTA+TGG | - | chr7.4:3229922-3229941 | MS.gene78599:intron | 10.0% |
| !!! | ATATATTTATGTTTTTTACT+AGG | - | chr7.4:3228250-3228269 | MS.gene78599:CDS | 10.0% |
| !!! | ATATGATTATATTCAATTTT+AGG | + | chr7.4:3228234-3228253 | None:intergenic | 10.0% |
| !!! | GAAAGTATTATTTTATATTA+TGG | - | chr7.4:3228602-3228621 | MS.gene78599:intron | 10.0% |
| !!! | AGAAATTAGAATTTTTTTGT+AGG | - | chr7.4:3228567-3228586 | MS.gene78599:CDS | 15.0% |
| !! | AAATATGTCATTATGAACAA+AGG | + | chr7.4:3230829-3230848 | None:intergenic | 20.0% |
| !! | AAATTTGTGAAGATACATTA+TGG | + | chr7.4:3228973-3228992 | None:intergenic | 20.0% |
| !! | AATGAAAATGAAATTGCAAA+TGG | - | chr7.4:3228418-3228437 | MS.gene78599:CDS | 20.0% |
| !! | AATTATTAATTCTTCTCAGT+GGG | + | chr7.4:3231022-3231041 | None:intergenic | 20.0% |
| !! | ACATAAATAATTAACCCTTA+GGG | + | chr7.4:3229494-3229513 | None:intergenic | 20.0% |
| !! | GAAGATATTCTATATTATTG+TGG | - | chr7.4:3229967-3229986 | MS.gene78599:intron | 20.0% |
| !! | TACATAAATAATTAACCCTT+AGG | + | chr7.4:3229495-3229514 | None:intergenic | 20.0% |
| !! | TTTATTTATGATGTTGATCT+TGG | - | chr7.4:3230419-3230438 | MS.gene78599:intron | 20.0% |
| !!! | ATATGTGGTTGAATTTTTAA+AGG | - | chr7.4:3230878-3230897 | MS.gene78599:intron | 20.0% |
| !!! | ATTTTTTTTTTATCATGCAG+AGG | - | chr7.4:3228646-3228665 | MS.gene78599:intron | 20.0% |
| !!! | GCAATTTCATTTTCATTTAA+TGG | + | chr7.4:3228415-3228434 | None:intergenic | 20.0% |
| !!! | TCAAGATTTTCTTCAATATT+GGG | + | chr7.4:3227966-3227985 | None:intergenic | 20.0% |
| !!! | TTTTTACTAGGATGTTTTTT+TGG | - | chr7.4:3228262-3228281 | MS.gene78599:CDS | 20.0% |
| ! | AAATAAACCTCCAATCATTA+TGG | + | chr7.4:3229548-3229567 | None:intergenic | 25.0% |
| ! | AAATGAAATTGCAAATGGAT+CGG | - | chr7.4:3228423-3228442 | MS.gene78599:CDS | 25.0% |
| ! | AGAATTAGTATGGAAATAGT+AGG | - | chr7.4:3229932-3229951 | MS.gene78599:intron | 25.0% |
| ! | AGATCATAACATTGAGTTAA+TGG | + | chr7.4:3229171-3229190 | None:intergenic | 25.0% |
| ! | ATTATTAATTCTTCTCAGTG+GGG | + | chr7.4:3231021-3231040 | None:intergenic | 25.0% |
| ! | CTCAGGTAAATTATAAATGT+TGG | - | chr7.4:3228000-3228019 | MS.gene78599:CDS | 25.0% |
| ! | GAATTATTAATTCTTCTCAG+TGG | + | chr7.4:3231023-3231042 | None:intergenic | 25.0% |
| ! | GATCATAACATTGAGTTAAT+GGG | + | chr7.4:3229170-3229189 | None:intergenic | 25.0% |
| ! | TGAAAAGATAAAAGATCTCT+TGG | - | chr7.4:3228894-3228913 | MS.gene78599:CDS | 25.0% |
| ! | TTACATGATTGACAATATCA+AGG | + | chr7.4:3229815-3229834 | None:intergenic | 25.0% |
| ! | TTCCTTAATACTGAAAAATC+TGG | - | chr7.4:3230674-3230693 | MS.gene78599:CDS | 25.0% |
| ! | TTTATAATTTACCTGAGCTT+TGG | + | chr7.4:3227997-3228016 | None:intergenic | 25.0% |
| !! | AACTTCATGCTTCATTTTAT+TGG | + | chr7.4:3229218-3229237 | None:intergenic | 25.0% |
| !! | AATGTTTGCATTTTTGCATA+TGG | - | chr7.4:3228719-3228738 | MS.gene78599:CDS | 25.0% |
| !! | AGAGTTTTTCCTTGAATAAT+TGG | - | chr7.4:3229840-3229859 | MS.gene78599:CDS | 25.0% |
| !! | ATGCTTCATTTTATTGGTAA+TGG | + | chr7.4:3229212-3229231 | None:intergenic | 25.0% |
| !! | ATGTTTGCATTTTTGCATAT+GGG | - | chr7.4:3228720-3228739 | MS.gene78599:CDS | 25.0% |
| !! | CTTTACTCATCTAAAATATG+TGG | - | chr7.4:3230863-3230882 | MS.gene78599:intron | 25.0% |
| !! | GTCAAGATTTTCTTCAATAT+TGG | + | chr7.4:3227967-3227986 | None:intergenic | 25.0% |
| !!! | TGGTTGAATTTTTAAAGGTT+CGG | - | chr7.4:3230883-3230902 | MS.gene78599:intron | 25.0% |
| AAACCTTGTCTTGAAGATTT+CGG | + | chr7.4:3230805-3230824 | None:intergenic | 30.0% | |
| AATAAGTCTCTATCATCACT+TGG | - | chr7.4:3230160-3230179 | MS.gene78599:intron | 30.0% | |
| AATCCTTCTCAATATTGCTT+TGG | - | chr7.4:3228053-3228072 | MS.gene78599:CDS | 30.0% | |
| AATGAAGTGATTGAACTCAA+GGG | - | chr7.4:3228361-3228380 | MS.gene78599:CDS | 30.0% | |
| AGAAAAAACTCACTTCTTAG+TGG | + | chr7.4:3228938-3228957 | None:intergenic | 30.0% | |
| AGTTAACTATAGAACTCTTG+AGG | - | chr7.4:3228795-3228814 | MS.gene78599:intron | 30.0% | |
| ATATGTAAGAACGTGTGTTA+TGG | + | chr7.4:3230254-3230273 | None:intergenic | 30.0% | |
| ATGGGGGAAAATTTAATCAA+TGG | - | chr7.4:3230034-3230053 | MS.gene78599:intron | 30.0% | |
| ATTATTGTGGATAACAGAGA+TGG | - | chr7.4:3229980-3229999 | MS.gene78599:intron | 30.0% | |
| CTTGTTGAAACACATGTTTA+TGG | - | chr7.4:3229638-3229657 | MS.gene78599:intron | 30.0% | |
| GAACTCTTGAGGAATTATTT+CGG | - | chr7.4:3228806-3228825 | MS.gene78599:intron | 30.0% | |
| TCAATTGCTGATGTTGTTAT+TGG | + | chr7.4:3231332-3231351 | None:intergenic | 30.0% | |
| TGAAAAATCTGGTCATAAAC+AGG | - | chr7.4:3230685-3230704 | MS.gene78599:CDS | 30.0% | |
| TGAGGAATTATTTCGGATTT+CGG | - | chr7.4:3228813-3228832 | MS.gene78599:intron | 30.0% | |
| TTATTAATTCTTCTCAGTGG+GGG | + | chr7.4:3231020-3231039 | None:intergenic | 30.0% | |
| TTCAAACCTGAAGATAATCA+AGG | - | chr7.4:3228538-3228557 | MS.gene78599:CDS | 30.0% | |
| TTTACTAATGAAATGCAGGT+TGG | - | chr7.4:3229574-3229593 | MS.gene78599:intron | 30.0% | |
| TTTGTGAGTCATGATAGAAT+TGG | - | chr7.4:3229292-3229311 | MS.gene78599:CDS | 30.0% | |
| ! | AATTGCTGATGTTGTTATTG+GGG | + | chr7.4:3231330-3231349 | None:intergenic | 30.0% |
| ! | CAATTGCTGATGTTGTTATT+GGG | + | chr7.4:3231331-3231350 | None:intergenic | 30.0% |
| ! | CAATTTTAGGCATATGTTAG+AGG | + | chr7.4:3228221-3228240 | None:intergenic | 30.0% |
| ! | CAGTTTTACTAATGAAATGC+AGG | - | chr7.4:3229570-3229589 | MS.gene78599:intron | 30.0% |
| ! | TGAATTGCTTGTTAGTATGT+TGG | - | chr7.4:3228861-3228880 | MS.gene78599:intron | 30.0% |
| !! | CAATTTTGAGTCAAATTCTG+AGG | - | chr7.4:3228459-3228478 | MS.gene78599:CDS | 30.0% |
| !! | GACCAGATTTTTCAGTATTA+AGG | + | chr7.4:3230679-3230698 | None:intergenic | 30.0% |
| !! | GGTTGAATTTTTAAAGGTTC+GGG | - | chr7.4:3230884-3230903 | MS.gene78599:intron | 30.0% |
| !!! | TGTTCTATTCTTTTTGAGAC+AGG | - | chr7.4:3230309-3230328 | MS.gene78599:intron | 30.0% |
| !!! | TGTTTTTTTGGTTTGTGACT+AGG | - | chr7.4:3228274-3228293 | MS.gene78599:CDS | 30.0% |
| AAAGTCCAAACACGATGAAA+AGG | - | chr7.4:3230712-3230731 | MS.gene78599:intron | 35.0% | |
| AAGATAAAAGATCTCTTGGC+AGG | - | chr7.4:3228898-3228917 | MS.gene78599:CDS | 35.0% | |
| AAGTTTCACTTGTTCGCTAA+GGG | + | chr7.4:3228141-3228160 | None:intergenic | 35.0% | |
| ACCAAAGAGAATTACCTGTA+AGG | + | chr7.4:3230226-3230245 | None:intergenic | 35.0% | |
| ACTGAAGTGGAAAACAAGTA+AGG | - | chr7.4:3229269-3229288 | MS.gene78599:CDS | 35.0% | |
| ACTTTGCAAGATAAAGTTGC+TGG | - | chr7.4:3229017-3229036 | MS.gene78599:CDS | 35.0% | |
| AGAATTACCTGTAAGGAATG+TGG | + | chr7.4:3230219-3230238 | None:intergenic | 35.0% | |
| AGAGAACAAAAAGTCACCTT+TGG | - | chr7.4:3230059-3230078 | MS.gene78599:intron | 35.0% | |
| CAATGAAGTGATTGAACTCA+AGG | - | chr7.4:3228360-3228379 | MS.gene78599:CDS | 35.0% | |
| CATGTACCTTGATTATCTTC+AGG | + | chr7.4:3228547-3228566 | None:intergenic | 35.0% | |
| CTACTGAACTAGGACTTATT+TGG | + | chr7.4:3230485-3230504 | None:intergenic | 35.0% | |
| CTCAAGTGATATTACTGAAG+TGG | - | chr7.4:3229256-3229275 | MS.gene78599:intron | 35.0% | |
| GAATTACCTGTAAGGAATGT+GGG | + | chr7.4:3230218-3230237 | None:intergenic | 35.0% | |
| GGATATCAGAATTGTGATTG+GGG | + | chr7.4:3229396-3229415 | None:intergenic | 35.0% | |
| GGGATATCAGAATTGTGATT+GGG | + | chr7.4:3229397-3229416 | None:intergenic | 35.0% | |
| TAAAACATCTAGACCAGGAA+AGG | + | chr7.4:3228174-3228193 | None:intergenic | 35.0% | |
| TAACTACTGTGACTGTTAGT+TGG | + | chr7.4:3229448-3229467 | None:intergenic | 35.0% | |
| TAGCCAAAGCAATATTGAGA+AGG | + | chr7.4:3228059-3228078 | None:intergenic | 35.0% | |
| TCCTTACAGGTAATTCTCTT+TGG | - | chr7.4:3230222-3230241 | MS.gene78599:intron | 35.0% | |
| TCGACTTTCTTGCTTTAATC+TGG | + | chr7.4:3230943-3230962 | None:intergenic | 35.0% | |
| TCTGTTAAGTCTACTGAACT+AGG | + | chr7.4:3230495-3230514 | None:intergenic | 35.0% | |
| TCTTGGTAGACCATAATGAT+TGG | - | chr7.4:3229535-3229554 | MS.gene78599:intron | 35.0% | |
| TGGGATATCAGAATTGTGAT+TGG | + | chr7.4:3229398-3229417 | None:intergenic | 35.0% | |
| TTAAAGTCTGTTCAGCTTCT+GGG | - | chr7.4:3228191-3228210 | MS.gene78599:CDS | 35.0% | |
| TTGATCTTGGCATAAAATGC+AGG | - | chr7.4:3230432-3230451 | MS.gene78599:intron | 35.0% | |
| TTGCTGAGAAGACAATAAAG+AGG | - | chr7.4:3230970-3230989 | MS.gene78599:CDS | 35.0% | |
| TTTCCTTGAATAATTGGCAG+AGG | - | chr7.4:3229846-3229865 | MS.gene78599:CDS | 35.0% | |
| ! | AAAGGTGACTTTTTGTTCTC+TGG | + | chr7.4:3230060-3230079 | None:intergenic | 35.0% |
| ! | ATTGCTTGTTAGTATGTTGG+AGG | - | chr7.4:3228864-3228883 | MS.gene78599:intron | 35.0% |
| ! | TTTAAAGTCTGTTCAGCTTC+TGG | - | chr7.4:3228190-3228209 | MS.gene78599:CDS | 35.0% |
| !! | GACTTTAAAACATCTAGACC+AGG | + | chr7.4:3228179-3228198 | None:intergenic | 35.0% |
| !! | TATGCGCTTTTTACTTTTCC+TGG | - | chr7.4:3229789-3229808 | MS.gene78599:CDS | 35.0% |
| !! | TTTATTGGTAATGGAGAGAG+AGG | + | chr7.4:3229203-3229222 | None:intergenic | 35.0% |
| AAACTGAAGCTGAAGGAGAA+AGG | - | chr7.4:3230116-3230135 | MS.gene78599:intron | 40.0% | |
| AAAGGAAAGCTCGGTATTCA+AGG | - | chr7.4:3231297-3231316 | MS.gene78599:CDS | 40.0% | |
| AACACGATGAAAAGGAAGCT+AGG | - | chr7.4:3230720-3230739 | MS.gene78599:intron | 40.0% | |
| AACACGCGTGGCAAAATTTA+GGG | + | chr7.4:3230529-3230548 | None:intergenic | 40.0% | |
| AACTGGTAAGACTTTCACCA+TGG | - | chr7.4:3228750-3228769 | MS.gene78599:CDS | 40.0% | |
| AATACTATGTCAACCCAGGA+CGG | - | chr7.4:3227931-3227950 | MS.gene78599:CDS | 40.0% | |
| ACACATGTTTATGGAGCAGA+TGG | - | chr7.4:3229647-3229666 | MS.gene78599:intron | 40.0% | |
| ACATGTGTTTCAACAAGTCC+TGG | + | chr7.4:3229635-3229654 | None:intergenic | 40.0% | |
| ACCCTTAGGGATGTATGTTA+CGG | + | chr7.4:3229481-3229500 | None:intergenic | 40.0% | |
| ACCGTAACATACATCCCTAA+GGG | - | chr7.4:3229477-3229496 | MS.gene78599:intron | 40.0% | |
| ACCTATTGTTGCATCAGTAC+TGG | - | chr7.4:3228688-3228707 | MS.gene78599:CDS | 40.0% | |
| ATCTTGGCATAAAATGCAGG+AGG | - | chr7.4:3230435-3230454 | MS.gene78599:intron | 40.0% | |
| CAAGTTTCACTTGTTCGCTA+AGG | + | chr7.4:3228142-3228161 | None:intergenic | 40.0% | |
| CAGAAAGAATACGAGACCTT+AGG | - | chr7.4:3229341-3229360 | MS.gene78599:CDS | 40.0% | |
| CAGCTAAGTCAACTAACCAA+AGG | + | chr7.4:3230078-3230097 | None:intergenic | 40.0% | |
| CATATACTTCAGAGCTCGTT+AGG | - | chr7.4:3230347-3230366 | MS.gene78599:intron | 40.0% | |
| CATGTGTTTCAACAAGTCCT+GGG | + | chr7.4:3229634-3229653 | None:intergenic | 40.0% | |
| CCAAGACATACCAATGAGAA+CGG | + | chr7.4:3229745-3229764 | None:intergenic | 40.0% | |
| GCTCTTGAAGTACAAGCAAA+TGG | - | chr7.4:3230596-3230615 | MS.gene78599:CDS | 40.0% | |
| GTAGGTAAAACTGAAGCTGA+AGG | - | chr7.4:3230109-3230128 | MS.gene78599:intron | 40.0% | |
| GTTACAGGGAAAGGAAAACA+CGG | - | chr7.4:3231088-3231107 | MS.gene78599:CDS | 40.0% | |
| TAAGGAACCAAAGGAAAGCT+CGG | - | chr7.4:3231288-3231307 | MS.gene78599:CDS | 40.0% | |
| TACCGTAACATACATCCCTA+AGG | - | chr7.4:3229476-3229495 | MS.gene78599:intron | 40.0% | |
| TAGTTAACTCCTCTATGCTC+TGG | + | chr7.4:3228784-3228803 | None:intergenic | 40.0% | |
| TATGGAAATAGTAGGCTAGC+TGG | - | chr7.4:3229940-3229959 | MS.gene78599:intron | 40.0% | |
| TCATTATGGTCTACCAAGAG+TGG | + | chr7.4:3229534-3229553 | None:intergenic | 40.0% | |
| TCTGCTTCTCAATTGACCAA+TGG | - | chr7.4:3231242-3231261 | MS.gene78599:intron | 40.0% | |
| TGAGAAGCAGAAGTAGTTTC+AGG | + | chr7.4:3231233-3231252 | None:intergenic | 40.0% | |
| TGAGTGAGAGCAATTCTGAT+GGG | + | chr7.4:3229417-3229436 | None:intergenic | 40.0% | |
| TGATTGACAATATCAAGGCC+AGG | + | chr7.4:3229810-3229829 | None:intergenic | 40.0% | |
| TGCAACGCAAATCTTTAGTG+TGG | - | chr7.4:3231462-3231481 | MS.gene78599:intron | 40.0% | |
| TGGTAGACCATAATGATTGG+AGG | - | chr7.4:3229538-3229557 | MS.gene78599:intron | 40.0% | |
| TGGTGAAAGTCTTACCAGTT+CGG | + | chr7.4:3228750-3228769 | None:intergenic | 40.0% | |
| TTATGGAGCAGATGGTGTTT+GGG | - | chr7.4:3229655-3229674 | MS.gene78599:intron | 40.0% | |
| TTGAATACCGAGCTTTCCTT+TGG | + | chr7.4:3231298-3231317 | None:intergenic | 40.0% | |
| TTGCCTCTGCCAATTATTCA+AGG | + | chr7.4:3229852-3229871 | None:intergenic | 40.0% | |
| TTGCTTGTACTTCAAGAGCT+CGG | + | chr7.4:3230595-3230614 | None:intergenic | 40.0% | |
| TTTATGGAGCAGATGGTGTT+TGG | - | chr7.4:3229654-3229673 | MS.gene78599:intron | 40.0% | |
| TTTGCACCTGCTTTCTTTGA+AGG | - | chr7.4:3229110-3229129 | MS.gene78599:intron | 40.0% | |
| ! | AAAGTACCTAGATGTGTCCT+CGG | - | chr7.4:3228321-3228340 | MS.gene78599:CDS | 40.0% |
| ! | ACTAATGAAATGCAGGTTGG+AGG | - | chr7.4:3229577-3229596 | MS.gene78599:intron | 40.0% |
| ! | AGCTTCCTTTTCATCGTGTT+TGG | + | chr7.4:3230720-3230739 | None:intergenic | 40.0% |
| ! | ATTGTTGCATCAGTACTGGA+TGG | - | chr7.4:3228692-3228711 | MS.gene78599:CDS | 40.0% |
| ! | CTTTGAAGGCAGAGTATAGT+TGG | - | chr7.4:3229124-3229143 | MS.gene78599:intron | 40.0% |
| ! | CTTTGGTTAGTTGACTTAGC+TGG | - | chr7.4:3230076-3230095 | MS.gene78599:intron | 40.0% |
| ! | TTACCTGAGCTTTGGTACTT+AGG | + | chr7.4:3227989-3228008 | None:intergenic | 40.0% |
| ! | TTCCTTTGGTTCCTTACCAT+CGG | + | chr7.4:3231284-3231303 | None:intergenic | 40.0% |
| !! | AGATGGTTTTACACGCAGTT+TGG | - | chr7.4:3229997-3230016 | MS.gene78599:intron | 40.0% |
| !! | GTTTGGGAAATTCTGAAGTC+TGG | - | chr7.4:3229671-3229690 | MS.gene78599:intron | 40.0% |
| !! | TCCAGTACTGATGCAACAAT+AGG | + | chr7.4:3228692-3228711 | None:intergenic | 40.0% |
| !! | TGTGGCTAGTCTCATTTGTA+CGG | + | chr7.4:3230768-3230787 | None:intergenic | 40.0% |
| AACAAGTCCTGGGACTTCTT+GGG | + | chr7.4:3229624-3229643 | None:intergenic | 45.0% | |
| AACCGATGGTAAGGAACCAA+AGG | - | chr7.4:3231279-3231298 | MS.gene78599:intron | 45.0% | |
| AATCAGCCCACATTCCTTAC+AGG | - | chr7.4:3230209-3230228 | MS.gene78599:intron | 45.0% | |
| ACTCTGCCTTCAAAGAAAGC+AGG | + | chr7.4:3229119-3229138 | None:intergenic | 45.0% | |
| AGATTTGAGCCTACCACTCT+TGG | - | chr7.4:3229518-3229537 | MS.gene78599:intron | 45.0% | |
| AGTCATCACTCTTGCCATCT+CGG | - | chr7.4:3231522-3231541 | MS.gene78599:CDS | 45.0% | |
| ATCAGCAATTGAGACAACCC+CGG | - | chr7.4:3231340-3231359 | MS.gene78599:CDS | 45.0% | |
| CAGAATTGTGATTGGGGCTT+GGG | + | chr7.4:3229390-3229409 | None:intergenic | 45.0% | |
| CCGTTCTCATTGGTATGTCT+TGG | - | chr7.4:3229742-3229761 | MS.gene78599:intron | 45.0% | |
| GAACACGCGTGGCAAAATTT+AGG | + | chr7.4:3230530-3230549 | None:intergenic | 45.0% | |
| GGAAACAGAGTCAGATCAGT+TGG | - | chr7.4:3229692-3229711 | MS.gene78599:intron | 45.0% | |
| GGTAAGACTTTCACCATGGA+AGG | - | chr7.4:3228754-3228773 | MS.gene78599:CDS | 45.0% | |
| GTGAGTGAGAGCAATTCTGA+TGG | + | chr7.4:3229418-3229437 | None:intergenic | 45.0% | |
| GTGCCGAAATCTTCAAGACA+AGG | - | chr7.4:3230799-3230818 | MS.gene78599:intron | 45.0% | |
| TAGTGTGGAGTCCTCTCAAA+CGG | - | chr7.4:3231477-3231496 | MS.gene78599:intron | 45.0% | |
| TATGGTCTACCAAGAGTGGT+AGG | + | chr7.4:3229530-3229549 | None:intergenic | 45.0% | |
| TCAGAATTGTGATTGGGGCT+TGG | + | chr7.4:3229391-3229410 | None:intergenic | 45.0% | |
| TCATGCAGCTCTTCGTTACA+GGG | - | chr7.4:3231074-3231093 | MS.gene78599:CDS | 45.0% | |
| TCGGCACATGAATTCTCTTG+TGG | + | chr7.4:3230786-3230805 | None:intergenic | 45.0% | |
| TGACCTAAGTACCAAAGCTC+AGG | - | chr7.4:3227983-3228002 | MS.gene78599:CDS | 45.0% | |
| TGGATAAAAGCAGCAGCAGT+AGG | - | chr7.4:3231366-3231385 | MS.gene78599:intron | 45.0% | |
| TGGATCTCTTGACTGTCCTA+AGG | + | chr7.4:3229360-3229379 | None:intergenic | 45.0% | |
| TTGGTGCGGGTAACTGTTAT+GGG | - | chr7.4:3230016-3230035 | MS.gene78599:intron | 45.0% | |
| ! | GTAAGGAATGTGGGCTGATT+TGG | + | chr7.4:3230209-3230228 | None:intergenic | 45.0% |
| ! | TTCAGGTTTGAGTGTTGCCA+GGG | + | chr7.4:3231216-3231235 | None:intergenic | 45.0% |
| ! | TTGGTGGTCATTGCTTCCAT+TGG | + | chr7.4:3231261-3231280 | None:intergenic | 45.0% |
| ! | TTTGGTGCGGGTAACTGTTA+TGG | - | chr7.4:3230015-3230034 | MS.gene78599:intron | 45.0% |
| ! | TTTGGTTCCTTACCATCGGT+TGG | + | chr7.4:3231280-3231299 | None:intergenic | 45.0% |
| !! | GAGGACATCACTGATTCCTT+TGG | - | chr7.4:3230989-3231008 | MS.gene78599:CDS | 45.0% |
| !! | GTTTTACACGCAGTTTGGTG+CGG | - | chr7.4:3230002-3230021 | MS.gene78599:intron | 45.0% |
| !! | TTTCAGGTTTGAGTGTTGCC+AGG | + | chr7.4:3231217-3231236 | None:intergenic | 45.0% |
| !!! | CTGCTGCTTTTATCCAAAGC+CGG | + | chr7.4:3231362-3231381 | None:intergenic | 45.0% |
| !!! | TGCTGCTTTTATCCAAAGCC+GGG | + | chr7.4:3231361-3231380 | None:intergenic | 45.0% |
| !!! | TTTTACACGCAGTTTGGTGC+GGG | - | chr7.4:3230003-3230022 | MS.gene78599:intron | 45.0% |
| AAGCAATGACCACCAACCGA+TGG | - | chr7.4:3231265-3231284 | MS.gene78599:intron | 50.0% | |
| AAGCACAACCTCTTCAGCCT+AGG | - | chr7.4:3231180-3231199 | MS.gene78599:CDS | 50.0% | |
| AATTGAGACAACCCCGGCTT+TGG | - | chr7.4:3231346-3231365 | MS.gene78599:CDS | 50.0% | |
| ACTTCAGAGCTCGTTAGGTG+AGG | - | chr7.4:3230352-3230371 | MS.gene78599:intron | 50.0% | |
| AGCAGCAGCAGTAGGTTTGA+TGG | - | chr7.4:3231374-3231393 | MS.gene78599:intron | 50.0% | |
| AGCTGAAGGAGAAAGGCTGA+AGG | - | chr7.4:3230123-3230142 | MS.gene78599:intron | 50.0% | |
| AGCTTAGCAGCCGTTCTCAT+TGG | - | chr7.4:3229732-3229751 | MS.gene78599:intron | 50.0% | |
| AGGTCTACTTGCTTTCGAGC+TGG | + | chr7.4:3230570-3230589 | None:intergenic | 50.0% | |
| ATCCATTGCTGCAAGACCAC+CGG | - | chr7.4:3231145-3231164 | MS.gene78599:CDS | 50.0% | |
| ATGACCACCAACCGATGGTA+AGG | - | chr7.4:3231270-3231289 | MS.gene78599:intron | 50.0% | |
| ATGCTCTGGTGTTCCTTCCA+TGG | + | chr7.4:3228770-3228789 | None:intergenic | 50.0% | |
| CAACAAGTCCTGGGACTTCT+TGG | + | chr7.4:3229625-3229644 | None:intergenic | 50.0% | |
| CAACACAGGCTGCAGATTCA+CGG | - | chr7.4:3231402-3231421 | MS.gene78599:intron | 50.0% | |
| CAGCTCTTCGTTACAGGGAA+AGG | - | chr7.4:3231079-3231098 | MS.gene78599:CDS | 50.0% | |
| CGGATTTCGGAAGAGAGACA+AGG | - | chr7.4:3228826-3228845 | MS.gene78599:intron | 50.0% | |
| CGTGTTCGAGGAATTGAGAG+TGG | - | chr7.4:3230543-3230562 | MS.gene78599:intron | 50.0% | |
| CTCATGCAGCTCTTCGTTAC+AGG | - | chr7.4:3231073-3231092 | MS.gene78599:CDS | 50.0% | |
| CTGTAACGAAGAGCTGCATG+AGG | + | chr7.4:3231075-3231094 | None:intergenic | 50.0% | |
| CTTGTGCTTCAGTCCTTTCC+TGG | - | chr7.4:3228158-3228177 | MS.gene78599:CDS | 50.0% | |
| GAAGGAACACCAGAGCATAG+AGG | - | chr7.4:3228772-3228791 | MS.gene78599:intron | 50.0% | |
| GCTAAGCTCGTTAGCACTTG+TGG | + | chr7.4:3229720-3229739 | None:intergenic | 50.0% | |
| GGATCTCGAGAACCAGATTG+CGG | - | chr7.4:3230905-3230924 | MS.gene78599:intron | 50.0% | |
| GTTGCAGTGCAATCACAGCT+GGG | + | chr7.4:3231448-3231467 | None:intergenic | 50.0% | |
| TAACGAAGAGCTGCATGAGG+AGG | + | chr7.4:3231072-3231091 | None:intergenic | 50.0% | |
| TCGATACCTCTCCGTTTGAG+AGG | + | chr7.4:3231491-3231510 | None:intergenic | 50.0% | |
| TGAAGAGGTTGTGCTTGCGA+CGG | + | chr7.4:3231176-3231195 | None:intergenic | 50.0% | |
| TGCATATGGGCAAACCGAAC+TGG | - | chr7.4:3228733-3228752 | MS.gene78599:CDS | 50.0% | |
| TGGTGCGGGTAACTGTTATG+GGG | - | chr7.4:3230017-3230036 | MS.gene78599:intron | 50.0% | |
| TTGTGATTGGGGCTTGGGAA+AGG | + | chr7.4:3229385-3229404 | None:intergenic | 50.0% | |
| ! | AAATAGTAGGCTAGCTGGCG+AGG | - | chr7.4:3229945-3229964 | MS.gene78599:intron | 50.0% |
| ! | AATTTTGCCACGCGTGTTCG+AGG | - | chr7.4:3230531-3230550 | MS.gene78599:intron | 50.0% |
| ! | CAGATTCACGGATGATGGCT+AGG | - | chr7.4:3231414-3231433 | MS.gene78599:intron | 50.0% |
| ! | GTTTGATGGCAGTCCAACAC+AGG | - | chr7.4:3231388-3231407 | MS.gene78599:intron | 50.0% |
| ! | TGTACTTCAAGAGCTCGGTG+AGG | + | chr7.4:3230590-3230609 | None:intergenic | 50.0% |
| ! | TTTTCCTCTCCTCCGCAATC+TGG | + | chr7.4:3230920-3230939 | None:intergenic | 50.0% |
| !! | GTGGGCTGATTTGGAAGCAA+GGG | + | chr7.4:3230200-3230219 | None:intergenic | 50.0% |
| !! | TGTGGGCTGATTTGGAAGCA+AGG | + | chr7.4:3230201-3230220 | None:intergenic | 50.0% |
| !!! | GCTGCTTTTATCCAAAGCCG+GGG | + | chr7.4:3231360-3231379 | None:intergenic | 50.0% |
| AGAACCAGATTGCGGAGGAG+AGG | - | chr7.4:3230913-3230932 | MS.gene78599:intron | 55.0% | |
| AGTGCAATCACAGCTGGGTG+CGG | + | chr7.4:3231443-3231462 | None:intergenic | 55.0% | |
| ATTTGGGTGGAAGGCCGAGA+TGG | + | chr7.4:3231539-3231558 | None:intergenic | 55.0% | |
| CACAACCTCTTCAGCCTAGG+AGG | - | chr7.4:3231183-3231202 | MS.gene78599:intron | 55.0% | |
| CGTGAATCTGCAGCCTGTGT+TGG | + | chr7.4:3231404-3231423 | None:intergenic | 55.0% | |
| CGTTGCAGTGCAATCACAGC+TGG | + | chr7.4:3231449-3231468 | None:intergenic | 55.0% | |
| CTCAATTCCTCGAACACGCG+TGG | + | chr7.4:3230541-3230560 | None:intergenic | 55.0% | |
| CTCAGTGGGGGTCTTTCCAA+AGG | + | chr7.4:3231008-3231027 | None:intergenic | 55.0% | |
| GAGGTCAAGCAAGCTGCAGA+TGG | - | chr7.4:3229596-3229615 | MS.gene78599:intron | 55.0% | |
| GATGGAACCCAAGAAGTCCC+AGG | - | chr7.4:3229614-3229633 | MS.gene78599:intron | 55.0% | |
| GGCTGCAGATTCACGGATGA+TGG | - | chr7.4:3231409-3231428 | MS.gene78599:intron | 55.0% | |
| GGTGCGGGTAACTGTTATGG+GGG | - | chr7.4:3230018-3230037 | MS.gene78599:intron | 55.0% | |
| TAGATGTGTCCTCGGAGCGA+AGG | - | chr7.4:3228329-3228348 | MS.gene78599:CDS | 55.0% | |
| TCTCGAGAACCAGATTGCGG+AGG | - | chr7.4:3230908-3230927 | MS.gene78599:intron | 55.0% | |
| TGGAGTCCTCTCAAACGGAG+AGG | - | chr7.4:3231482-3231501 | MS.gene78599:intron | 55.0% | |
| TTAGCTGGCAGTGAGCGTGT+AGG | - | chr7.4:3230091-3230110 | MS.gene78599:intron | 55.0% | |
| TTCGCTCCGAGGACACATCT+AGG | + | chr7.4:3228330-3228349 | None:intergenic | 55.0% | |
| ! | GGTTCCTTACCATCGGTTGG+TGG | + | chr7.4:3231277-3231296 | None:intergenic | 55.0% |
| ! | TGGGAGTGTATGACCGTCCT+GGG | + | chr7.4:3227947-3227966 | None:intergenic | 55.0% |
| ! | TTGGGAGTGTATGACCGTCC+TGG | + | chr7.4:3227948-3227967 | None:intergenic | 55.0% |
| ACTCGCCTCCTAGGCTGAAG+AGG | + | chr7.4:3231191-3231210 | None:intergenic | 60.0% | |
| ATGTGTCCTCGGAGCGAAGG+AGG | - | chr7.4:3228332-3228351 | MS.gene78599:CDS | 60.0% | |
| ATTGGGGCTTGGGAAAGGCG+TGG | + | chr7.4:3229380-3229399 | None:intergenic | 60.0% | |
| CATGAGGAGGCCCTTCTCTC+GGG | + | chr7.4:3231059-3231078 | None:intergenic | 60.0% | |
| GCATGAGGAGGCCCTTCTCT+CGG | + | chr7.4:3231060-3231079 | None:intergenic | 60.0% | |
| GTTAAGCCTCCTTCGCTCCG+AGG | + | chr7.4:3228341-3228360 | None:intergenic | 60.0% | |
| ! | AGCCGGTGGTCTTGCAGCAA+TGG | + | chr7.4:3231150-3231169 | None:intergenic | 60.0% |
| GCCAGGGAAACTCGCCTCCT+AGG | + | chr7.4:3231200-3231219 | None:intergenic | 65.0% | |
| GCCTAGGAGGCGAGTTTCCC+TGG | - | chr7.4:3231196-3231215 | MS.gene78599:intron | 65.0% | |
| GCCTCCACCACCCGAGAGAA+GGG | - | chr7.4:3231046-3231065 | MS.gene78599:CDS | 65.0% | |
| TGCCTCCACCACCCGAGAGA+AGG | - | chr7.4:3231045-3231064 | MS.gene78599:CDS | 65.0% | |
| TGTGCTTGCGACGGTGCAGC+CGG | + | chr7.4:3231167-3231186 | None:intergenic | 65.0% | |
| !! | TCTCTCGGGTGGTGGAGGCA+AGG | + | chr7.4:3231045-3231064 | None:intergenic | 65.0% |
| GAGGAGGCCCTTCTCTCGGG+TGG | + | chr7.4:3231056-3231075 | None:intergenic | 70.0% | |
| GAGGCCCTTCTCTCGGGTGG+TGG | + | chr7.4:3231053-3231072 | None:intergenic | 70.0% | |
| ! | GCCCTTCTCTCGGGTGGTGG+AGG | + | chr7.4:3231050-3231069 | None:intergenic | 70.0% |
| GCTTGCGACGGTGCAGCCGG+TGG | + | chr7.4:3231164-3231183 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 3227931 | 3231565 | 3227931 | ID=MS.gene78599 |
| chr7.4 | mRNA | 3227931 | 3231565 | 3227931 | ID=MS.gene78599.t1;Parent=MS.gene78599 |
| chr7.4 | exon | 3231492 | 3231565 | 3231492 | ID=MS.gene78599.t1.exon1;Parent=MS.gene78599.t1 |
| chr7.4 | CDS | 3231492 | 3231565 | 3231492 | ID=cds.MS.gene78599.t1;Parent=MS.gene78599.t1 |
| chr7.4 | exon | 3231284 | 3231380 | 3231284 | ID=MS.gene78599.t1.exon2;Parent=MS.gene78599.t1 |
| chr7.4 | CDS | 3231284 | 3231380 | 3231284 | ID=cds.MS.gene78599.t1;Parent=MS.gene78599.t1 |
| chr7.4 | exon | 3230937 | 3231200 | 3230937 | ID=MS.gene78599.t1.exon3;Parent=MS.gene78599.t1 |
| chr7.4 | CDS | 3230937 | 3231200 | 3230937 | ID=cds.MS.gene78599.t1;Parent=MS.gene78599.t1 |
| chr7.4 | exon | 3230552 | 3230720 | 3230552 | ID=MS.gene78599.t1.exon4;Parent=MS.gene78599.t1 |
| chr7.4 | CDS | 3230552 | 3230720 | 3230552 | ID=cds.MS.gene78599.t1;Parent=MS.gene78599.t1 |
| chr7.4 | exon | 3229743 | 3229904 | 3229743 | ID=MS.gene78599.t1.exon5;Parent=MS.gene78599.t1 |
| chr7.4 | CDS | 3229743 | 3229904 | 3229743 | ID=cds.MS.gene78599.t1;Parent=MS.gene78599.t1 |
| chr7.4 | exon | 3229266 | 3229481 | 3229266 | ID=MS.gene78599.t1.exon6;Parent=MS.gene78599.t1 |
| chr7.4 | CDS | 3229266 | 3229481 | 3229266 | ID=cds.MS.gene78599.t1;Parent=MS.gene78599.t1 |
| chr7.4 | exon | 3229128 | 3229165 | 3229128 | ID=MS.gene78599.t1.exon7;Parent=MS.gene78599.t1 |
| chr7.4 | CDS | 3229128 | 3229165 | 3229128 | ID=cds.MS.gene78599.t1;Parent=MS.gene78599.t1 |
| chr7.4 | exon | 3228879 | 3229042 | 3228879 | ID=MS.gene78599.t1.exon8;Parent=MS.gene78599.t1 |
| chr7.4 | CDS | 3228879 | 3229042 | 3228879 | ID=cds.MS.gene78599.t1;Parent=MS.gene78599.t1 |
| chr7.4 | exon | 3228676 | 3228789 | 3228676 | ID=MS.gene78599.t1.exon9;Parent=MS.gene78599.t1 |
| chr7.4 | CDS | 3228676 | 3228789 | 3228676 | ID=cds.MS.gene78599.t1;Parent=MS.gene78599.t1 |
| chr7.4 | exon | 3227931 | 3228596 | 3227931 | ID=MS.gene78599.t1.exon10;Parent=MS.gene78599.t1 |
| chr7.4 | CDS | 3227931 | 3228596 | 3227931 | ID=cds.MS.gene78599.t1;Parent=MS.gene78599.t1 |
| Gene Sequence |
| Protein sequence |
