AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene78664

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78664.t1 MTR_8g042900 96.902 581 18 0 1 581 1 581 0.0 1170
MS.gene78664.t1 MTR_3g010780 72.165 582 153 4 1 581 1 574 0.0 843
MS.gene78664.t1 MTR_8g023150 48.744 597 272 13 1 581 4 582 1.27e-166 486
MS.gene78664.t1 MTR_4g087980 46.170 483 231 7 109 581 53 516 3.33e-144 427
MS.gene78664.t1 MTR_1g008140 41.497 588 302 15 23 581 33 607 1.18e-143 429
MS.gene78664.t1 MTR_7g112590 40.767 574 305 10 23 570 8 572 1.39e-141 423
MS.gene78664.t1 MTR_3g091380 40.893 582 311 12 22 581 27 597 1.22e-140 421
MS.gene78664.t1 MTR_1g083510 40.826 605 292 16 17 579 1 581 5.69e-140 419
MS.gene78664.t1 MTR_7g050950 44.078 515 271 9 74 581 49 553 8.70e-139 414
MS.gene78664.t1 MTR_7g108905 43.160 519 265 9 77 577 46 552 1.65e-136 409
MS.gene78664.t1 MTR_8g104655 48.817 465 209 8 135 581 88 541 6.71e-136 406
MS.gene78664.t1 MTR_2g044880 45.011 451 227 5 141 581 86 525 7.82e-136 406
MS.gene78664.t1 MTR_7g112580 41.176 527 287 7 65 581 29 542 2.06e-135 405
MS.gene78664.t1 MTR_8g023310 43.019 530 270 9 76 581 68 589 1.40e-133 402
MS.gene78664.t1 MTR_4g087970 44.866 448 221 7 147 581 83 517 3.93e-133 399
MS.gene78664.t1 MTR_7g050870 43.520 517 272 11 74 581 49 554 1.11e-132 399
MS.gene78664.t1 MTR_4g025690 44.294 517 246 13 76 581 28 513 1.13e-132 397
MS.gene78664.t1 MTR_8g104645 55.587 349 143 5 241 581 28 372 3.52e-132 391
MS.gene78664.t1 MTR_1g083470 37.809 566 329 9 26 577 10 566 1.58e-131 397
MS.gene78664.t1 MTR_1g083500 37.809 566 329 9 26 577 10 566 1.58e-131 397
MS.gene78664.t1 MTR_1g054880 44.821 502 242 12 110 581 62 558 2.34e-131 395
MS.gene78664.t1 MTR_1g083490 38.179 571 325 11 26 577 10 571 2.65e-131 396
MS.gene78664.t1 MTR_4g124550 38.127 598 331 15 3 574 2 586 3.10e-131 396
MS.gene78664.t1 MTR_4g005170 38.070 570 325 11 27 577 11 571 2.14e-130 395
MS.gene78664.t1 MTR_4g025730 45.809 513 243 17 74 581 27 509 9.57e-130 389
MS.gene78664.t1 MTR_1g088020 45.781 474 223 11 140 581 84 555 7.55e-128 386
MS.gene78664.t1 MTR_8g042910 42.086 537 274 9 80 581 78 612 3.38e-127 387
MS.gene78664.t1 MTR_1g083520 42.315 527 267 10 71 581 23 528 3.33e-126 381
MS.gene78664.t1 MTR_3g010770 40.734 545 276 7 78 581 37 575 3.07e-125 380
MS.gene78664.t1 MTR_4g025670 43.416 486 234 11 113 581 28 489 3.92e-125 377
MS.gene78664.t1 MTR_4g005180 37.255 561 324 11 36 577 2 553 1.55e-124 378
MS.gene78664.t1 MTR_1g088225 45.570 474 222 12 140 581 84 553 2.20e-124 377
MS.gene78664.t1 MTR_7g050980 40.784 510 284 9 80 581 56 555 5.31e-124 376
MS.gene78664.t1 MTR_2g044810 40.000 510 282 8 74 577 39 530 1.11e-123 375
MS.gene78664.t1 MTR_1g086190 38.148 540 303 11 60 577 29 559 3.06e-123 375
MS.gene78664.t1 MTR_7g108875 43.902 492 238 11 127 581 74 564 3.12e-123 375
MS.gene78664.t1 MTR_4g124520 41.700 506 253 9 74 570 38 510 8.64e-123 372
MS.gene78664.t1 MTR_1g086210 38.686 548 292 13 65 577 27 565 6.31e-121 369
MS.gene78664.t1 MTR_7g108900 40.074 539 276 10 77 581 35 560 1.22e-120 368
MS.gene78664.t1 MTR_7g053360 41.109 523 270 12 73 581 29 527 4.05e-119 363
MS.gene78664.t1 MTR_7g108890 43.882 474 231 10 140 581 92 562 7.46e-119 363
MS.gene78664.t1 MTR_3g008700 45.125 441 218 9 150 581 102 527 5.48e-118 360
MS.gene78664.t1 MTR_3g008640 45.125 441 218 9 150 581 102 527 1.27e-117 359
MS.gene78664.t1 MTR_3g008720 45.125 441 218 9 150 581 102 527 1.27e-117 359
MS.gene78664.t1 MTR_3g033690 45.125 441 218 9 150 581 101 526 5.03e-117 357
MS.gene78664.t1 MTR_4g120280 37.217 575 321 11 24 577 13 568 2.71e-116 357
MS.gene78664.t1 MTR_2g436040 36.106 565 312 12 26 577 14 542 3.36e-115 355
MS.gene78664.t1 MTR_4g120290 36.285 576 325 10 24 577 13 568 9.17e-113 348
MS.gene78664.t1 MTR_4g035980 42.795 458 230 11 140 581 98 539 3.57e-110 340
MS.gene78664.t1 MTR_7g110440 37.729 546 305 12 63 581 29 566 4.11e-108 336
MS.gene78664.t1 MTR_2g436050 36.189 572 320 12 26 577 14 560 4.66e-107 333
MS.gene78664.t1 MTR_0458s0030 58.077 260 105 1 326 581 55 314 1.70e-106 323
MS.gene78664.t1 MTR_1g088040 58.077 260 105 1 326 581 55 314 1.70e-106 323
MS.gene78664.t1 MTR_8g104580 43.226 465 202 10 135 581 80 500 2.61e-105 326
MS.gene78664.t1 MTR_7g110490 35.911 582 327 13 27 581 4 566 3.89e-105 328
MS.gene78664.t1 MTR_7g110510 35.911 582 327 13 27 581 4 566 3.89e-105 328
MS.gene78664.t1 MTR_7g110560 34.974 569 326 12 26 577 4 545 2.13e-103 323
MS.gene78664.t1 MTR_2g044660 48.197 305 156 2 271 574 322 625 1.54e-97 310
MS.gene78664.t1 MTR_0618s0020 58.590 227 89 2 360 581 2 228 3.61e-93 285
MS.gene78664.t1 MTR_7g110420 38.655 476 256 12 142 581 103 578 3.69e-91 292
MS.gene78664.t1 MTR_5g083620 42.286 350 190 8 240 581 11 356 1.12e-89 281
MS.gene78664.t1 MTR_2g044810 50.000 246 119 1 336 577 216 461 7.92e-88 280
MS.gene78664.t1 MTR_8g093460 34.808 520 302 14 74 573 41 543 3.57e-87 281
MS.gene78664.t1 MTR_7g110430 36.422 464 239 9 141 581 102 532 2.14e-85 276
MS.gene78664.t1 MTR_8g088610 41.141 333 182 7 253 577 46 372 1.64e-84 268
MS.gene78664.t1 MTR_3g095920 32.348 575 325 19 27 570 12 553 8.74e-81 265
MS.gene78664.t1 MTR_7g107180 40.705 312 168 7 276 581 7 307 1.41e-69 227
MS.gene78664.t1 MTR_0458s0010 35.319 470 241 15 140 581 84 518 1.24e-68 231
MS.gene78664.t1 MTR_7g111560 31.213 503 300 14 105 579 70 554 2.14e-63 218
MS.gene78664.t1 MTR_2g105560 37.380 313 177 7 275 581 40 339 2.76e-63 211
MS.gene78664.t1 MTR_2g039530 38.941 321 153 9 243 546 22 316 3.51e-55 190
MS.gene78664.t1 MTR_6g088810 36.913 298 167 6 284 570 90 377 2.77e-51 181
MS.gene78664.t1 MTR_7g102600 31.722 331 203 7 254 570 72 393 2.23e-50 179
MS.gene78664.t1 MTR_6g012800 33.775 302 181 5 276 567 6 298 8.82e-50 175
MS.gene78664.t1 MTR_5g083590 33.010 309 153 5 274 577 5 264 1.08e-49 173
MS.gene78664.t1 MTR_6g024165 34.251 327 179 11 260 570 28 334 1.53e-49 175
MS.gene78664.t1 MTR_6g042660 35.036 274 159 7 276 544 37 296 6.67e-49 173
MS.gene78664.t1 MTR_7g092780 33.443 305 186 6 276 570 90 387 1.84e-48 173
MS.gene78664.t1 MTR_8g102380 35.667 300 170 5 284 570 88 377 2.18e-48 173
MS.gene78664.t1 MTR_1g033050 32.704 318 196 5 260 570 2 308 3.22e-47 168
MS.gene78664.t1 MTR_1g086540 32.075 318 192 7 267 570 37 344 1.28e-45 164
MS.gene78664.t1 MTR_7g011530 31.544 298 185 5 278 565 8 296 2.02e-43 157
MS.gene78664.t1 MTR_5g095490 33.444 302 177 7 282 570 67 357 2.39e-42 156
MS.gene78664.t1 MTR_6g042690 34.767 279 158 8 276 544 39 303 8.04e-42 154
MS.gene78664.t1 MTR_5g012600 30.769 312 194 6 276 575 63 364 7.91e-39 146
MS.gene78664.t1 MTR_8g102380 37.500 248 133 5 284 518 88 326 1.17e-38 145
MS.gene78664.t1 MTR_5g093970 31.438 299 189 6 276 570 43 329 1.40e-38 145
MS.gene78664.t1 MTR_4g124740 29.878 328 193 13 258 570 34 339 3.60e-37 141
MS.gene78664.t1 MTR_2g033970 30.065 306 192 6 276 572 56 348 4.47e-37 141
MS.gene78664.t1 MTR_5g088280 29.492 295 193 5 276 570 39 318 3.18e-36 138
MS.gene78664.t1 MTR_5g088290 30.405 296 190 5 276 570 48 328 3.40e-36 138
MS.gene78664.t1 MTR_5g088300 29.831 295 192 4 276 570 37 316 2.50e-34 133
MS.gene78664.t1 MTR_2g436070 30.514 331 198 10 26 347 14 321 1.64e-33 132
MS.gene78664.t1 MTR_2g073390 29.276 304 193 8 276 570 71 361 5.98e-32 127
MS.gene78664.t1 MTR_8g036225 28.289 304 195 6 276 570 33 322 6.62e-32 126
MS.gene78664.t1 MTR_4g074290 28.808 302 197 7 276 570 71 361 1.17e-31 126
MS.gene78664.t1 MTR_4g051810 28.808 302 187 6 276 570 37 317 1.41e-30 122
MS.gene78664.t1 MTR_2g436600 27.726 321 194 11 263 572 45 338 1.03e-28 117
MS.gene78664.t1 MTR_0009s0350 27.483 302 201 7 276 570 71 361 3.46e-28 116
MS.gene78664.t1 MTR_0009s0340 27.483 302 201 7 276 570 71 361 3.46e-28 116
MS.gene78664.t1 MTR_6g025590 33.708 178 107 5 260 429 36 210 5.05e-22 95.9
MS.gene78664.t1 MTR_0408s0030 40.860 93 50 2 452 544 36 123 3.05e-17 79.3
MS.gene78664.t1 MTR_7g102580 38.462 130 55 5 319 429 29 152 1.77e-16 77.4
MS.gene78664.t1 MTR_4g130790 27.755 245 152 7 279 513 25 254 5.17e-16 79.0
MS.gene78664.t1 MTR_8g104765 28.638 213 131 5 29 228 3 207 2.18e-15 75.9
MS.gene78664.t1 MTR_0036s0140 28.235 255 136 9 4 244 7 228 3.14e-15 75.9
MS.gene78664.t1 MTR_4g120830 28.169 213 123 5 29 228 3 198 1.25e-14 73.6
MS.gene78664.t1 MTR_7g108790 31.111 180 103 5 61 237 29 190 3.56e-14 72.0
MS.gene78664.t1 MTR_4g120825 27.700 213 124 5 29 228 3 198 1.22e-13 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78664.t1 AT3G10710 57.366 577 224 9 7 581 5 561 0.0 670
MS.gene78664.t1 AT5G04960 56.507 584 224 9 6 581 3 564 0.0 647
MS.gene78664.t1 AT1G53840 46.734 597 275 15 1 574 4 580 1.52e-162 476
MS.gene78664.t1 AT3G14300 47.784 519 236 13 73 571 456 959 6.43e-144 441
MS.gene78664.t1 AT3G14300 34.118 255 147 7 5 247 9 254 1.75e-27 118
MS.gene78664.t1 AT3G14300 37.427 171 85 7 73 228 268 431 3.33e-15 79.7
MS.gene78664.t1 AT3G05610 38.475 590 323 11 6 581 2 565 6.78e-143 429
MS.gene78664.t1 AT5G53370 41.567 587 307 13 12 581 18 585 6.13e-142 424
MS.gene78664.t1 AT5G27870 39.322 590 307 11 6 577 2 558 1.04e-141 428
MS.gene78664.t1 AT5G53370 41.509 583 313 11 12 581 54 621 2.87e-141 423
MS.gene78664.t1 AT5G49180 41.519 566 298 11 25 571 9 560 4.41e-138 413
MS.gene78664.t1 AT3G05620 40.490 531 279 7 69 581 30 541 2.68e-137 410
MS.gene78664.t1 AT3G43270 45.916 453 230 6 142 581 75 525 2.14e-136 407
MS.gene78664.t1 AT3G49220 40.909 572 312 12 22 581 39 596 3.61e-135 407
MS.gene78664.t1 AT3G49220 40.909 572 312 12 22 581 84 641 2.81e-134 406
MS.gene78664.t1 AT1G11580 41.682 547 296 9 43 581 26 557 5.89e-134 402
MS.gene78664.t1 AT1G11580 41.682 547 296 9 43 581 47 578 1.67e-133 402
MS.gene78664.t1 AT2G26450 38.080 625 326 14 3 581 2 611 2.38e-133 402
MS.gene78664.t1 AT4G33220 40.789 532 267 9 88 581 2 523 2.93e-132 397
MS.gene78664.t1 AT1G53830 42.058 554 277 13 62 581 44 587 9.07e-132 397
MS.gene78664.t1 AT3G14310 41.039 558 275 13 67 581 46 592 3.49e-131 396
MS.gene78664.t1 AT4G02330 42.287 551 269 14 73 581 28 571 1.64e-130 394
MS.gene78664.t1 AT4G33230 39.580 619 320 16 3 581 2 606 2.30e-130 395
MS.gene78664.t1 AT1G23200 47.425 466 202 11 139 574 95 547 1.12e-127 386
MS.gene78664.t1 AT2G47550 44.946 465 227 9 144 581 96 558 1.00e-124 379
MS.gene78664.t1 AT4G33220 51.786 336 150 4 253 581 72 402 1.99e-124 372
MS.gene78664.t1 AT1G02810 39.787 563 280 12 70 581 23 577 8.52e-124 377
MS.gene78664.t1 AT3G06830 38.078 541 309 9 60 581 35 568 1.05e-123 376
MS.gene78664.t1 AT2G26440 40.971 515 273 9 74 570 35 536 9.50e-123 373
MS.gene78664.t1 AT2G45220 48.098 447 201 13 141 581 90 511 5.15e-122 370
MS.gene78664.t1 AT5G51490 41.699 518 267 14 80 581 38 536 2.21e-120 367
MS.gene78664.t1 AT5G51500 41.154 520 281 13 73 581 35 540 4.89e-117 358
MS.gene78664.t1 AT2G43050 42.198 455 235 7 136 581 81 516 2.61e-116 355
MS.gene78664.t1 AT4G03930 43.596 445 232 7 142 581 94 524 1.08e-115 354
MS.gene78664.t1 AT1G11590 42.630 441 236 7 145 581 97 524 4.81e-113 347
MS.gene78664.t1 AT3G60730 41.480 446 228 8 157 581 86 519 1.18e-112 346
MS.gene78664.t1 AT3G27980 44.581 406 205 7 182 581 106 497 4.07e-112 344
MS.gene78664.t1 AT3G59010 42.495 473 243 12 124 581 70 528 1.20e-111 343
MS.gene78664.t1 AT3G10720 40.471 467 246 7 147 581 149 615 9.24e-111 344
MS.gene78664.t1 AT5G04970 40.043 467 248 7 147 581 154 620 4.46e-109 340
MS.gene78664.t1 AT4G02320 38.641 471 252 7 133 581 63 518 1.39e-108 335
MS.gene78664.t1 AT3G47400 37.925 530 302 10 68 581 76 594 8.89e-108 336
MS.gene78664.t1 AT4G02300 39.602 452 252 8 139 577 85 528 1.26e-104 326
MS.gene78664.t1 AT4G00190 40.858 443 228 8 144 581 61 474 1.36e-102 318
MS.gene78664.t1 AT5G20860 38.063 444 247 9 150 581 111 538 1.48e-101 318
MS.gene78664.t1 AT3G62170 33.846 585 329 12 30 570 7 577 1.68e-96 306
MS.gene78664.t1 AT3G10720 52.510 259 119 1 327 581 1 259 1.17e-95 293
MS.gene78664.t1 AT2G47040 33.333 603 318 14 29 570 5 584 6.32e-94 300
MS.gene78664.t1 AT4G15980 45.509 334 176 3 246 573 361 694 2.33e-93 301
MS.gene78664.t1 AT4G15980 32.121 165 98 6 74 233 46 201 5.76e-15 78.6
MS.gene78664.t1 AT4G15980 45.509 334 176 3 246 573 371 704 5.00e-93 301
MS.gene78664.t1 AT4G15980 32.121 165 98 6 74 233 56 211 5.98e-15 78.6
MS.gene78664.t1 AT2G47030 32.886 596 323 13 29 570 5 577 1.49e-92 296
MS.gene78664.t1 AT5G09760 36.023 533 289 14 67 569 36 546 7.18e-90 288
MS.gene78664.t1 AT5G09760 36.023 533 289 14 67 569 62 572 2.20e-89 287
MS.gene78664.t1 AT1G11370 48.810 252 125 1 267 514 37 288 3.57e-84 264
MS.gene78664.t1 AT5G64640 32.590 583 339 15 24 569 32 597 5.30e-84 274
MS.gene78664.t1 AT5G20860 35.581 430 221 8 150 567 111 496 1.88e-82 267
MS.gene78664.t1 AT1G05310 33.115 305 187 5 276 570 91 388 4.37e-52 183
MS.gene78664.t1 AT2G36710 34.528 307 185 5 273 570 86 385 1.20e-49 177
MS.gene78664.t1 AT5G19730 35.082 305 177 6 277 570 87 381 6.95e-49 174
MS.gene78664.t1 AT1G44980 44.444 189 104 1 253 440 54 242 2.36e-45 160
MS.gene78664.t1 AT2G21610 30.945 307 195 6 276 580 51 342 1.02e-44 162
MS.gene78664.t1 AT2G21610 30.945 307 195 6 276 580 56 347 1.31e-44 162
MS.gene78664.t1 AT3G29090 31.683 303 188 4 276 568 7 300 3.76e-44 160
MS.gene78664.t1 AT2G36700 31.667 300 188 5 278 570 44 333 3.22e-42 155
MS.gene78664.t1 AT5G55590 34.202 307 180 7 276 570 82 378 5.06e-42 155
MS.gene78664.t1 AT5G47500 28.134 359 232 7 224 570 13 357 1.30e-40 151
MS.gene78664.t1 AT3G24130 30.968 310 190 7 273 570 31 328 1.75e-40 150
MS.gene78664.t1 AT5G18990 30.968 310 192 6 272 570 25 323 1.83e-40 150
MS.gene78664.t1 AT3G17060 28.618 304 197 6 276 571 46 337 5.35e-40 149
MS.gene78664.t1 AT2G19150 31.579 304 187 6 276 570 41 332 1.06e-39 148
MS.gene78664.t1 AT3G49220 31.884 345 214 10 22 359 84 414 6.61e-39 148
MS.gene78664.t1 AT5G55590 35.714 252 142 6 276 515 82 325 6.69e-37 140
MS.gene78664.t1 AT5G07420 26.923 364 236 8 224 570 5 355 2.65e-35 136
MS.gene78664.t1 AT5G26810 28.617 311 195 6 276 570 34 333 2.88e-35 136
MS.gene78664.t1 AT5G07430 26.027 365 238 8 224 570 5 355 1.56e-34 134
MS.gene78664.t1 AT2G19150 32.530 249 149 5 276 515 41 279 3.07e-33 129
MS.gene78664.t1 AT2G47280 28.571 308 192 7 276 570 35 327 5.95e-32 126
MS.gene78664.t1 AT5G61680 27.632 304 197 7 276 570 69 358 1.52e-30 123
MS.gene78664.t1 AT1G69940 25.926 297 197 7 283 570 73 355 3.16e-28 116
MS.gene78664.t1 AT5G07410 25.926 297 197 7 283 570 73 355 1.12e-27 115
MS.gene78664.t1 AT4G25260 30.303 198 115 7 41 228 10 194 4.32e-13 68.9
MS.gene78664.t1 AT1G62760 31.707 164 91 5 76 228 148 301 6.28e-13 70.5
MS.gene78664.t1 AT2G01610 29.775 178 106 6 76 235 45 221 2.94e-11 63.9

Find 106 sgRNAs with CRISPR-Local

Find 143 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAACCATGTCTTCCTTTA+AGG 0.044203 8.4:-56616666 None:intergenic
TAAGGACTTAAACTTGAATT+TGG 0.188024 8.4:-56616261 MS.gene78664:CDS
GACTTTACCATAGGCCTTAA+AGG 0.212569 8.4:+56616652 None:intergenic
TTGAATAGCTCTTTGTCTTA+TGG 0.218218 8.4:-56616176 MS.gene78664:CDS
ATGAATGTTACTATTGTTTC+TGG 0.218323 8.4:-56615511 MS.gene78664:CDS
GATCAATTGTAAGGATCTTT+TGG 0.225160 8.4:-56616216 MS.gene78664:CDS
AGTTCTGTTAAAACATATTT+AGG 0.227942 8.4:-56614722 MS.gene78664:CDS
ATCTCTTTCAAGTTCAATTA+AGG 0.244852 8.4:-56616450 MS.gene78664:CDS
AATTGCAATGTGTCGCCTTT+TGG 0.251914 8.4:-56614752 MS.gene78664:CDS
AAATGGAATGTTATGATTAT+TGG 0.258364 8.4:-56615541 MS.gene78664:CDS
GGATTTATTATGAGAATGTT+AGG 0.275021 8.4:-56615576 MS.gene78664:CDS
GAAATTCCTGTGTTCATGTT+AGG 0.284061 8.4:+56614782 None:intergenic
GAAACTTGGTTGAGTGCTTC+AGG 0.293398 8.4:-56616116 MS.gene78664:intron
CCACTTGACCCTATTCTTCA+TGG 0.298592 8.4:+56614550 None:intergenic
TTAGGGTGGAAAAGACTAAA+TGG 0.331655 8.4:-56615558 MS.gene78664:CDS
CCTTAGTCCTCTTGTTCAAC+CGG 0.337493 8.4:-56616384 MS.gene78664:CDS
GTTTAATATTCAGCTGTGTT+TGG 0.340708 8.4:-56615103 MS.gene78664:intron
TGTTGCATTCGCGGTAGAAT+TGG 0.341900 8.4:+56614927 None:intergenic
TACCAGCAAACATGCATTGA+TGG 0.346136 8.4:-56615937 MS.gene78664:CDS
TTCGAACTTCGAACATGGCT+TGG 0.346240 8.4:+56616618 None:intergenic
GATAGATGGATCCCTGCTTC+TGG 0.358027 8.4:-56614461 MS.gene78664:CDS
TCCATTAAGAAAAGCCTTAA+CGG 0.358322 8.4:+56614484 None:intergenic
GTTACCTTGGGTTGGAGATT+CGG 0.370568 8.4:-56614624 MS.gene78664:CDS
TTTAATATTCAGCTGTGTTT+GGG 0.376483 8.4:-56615102 MS.gene78664:intron
AGCTCATAAGTTTACCGTTA+AGG 0.382121 8.4:-56614498 MS.gene78664:CDS
GTTATTGTGTTCTGCTGTCC+TGG 0.383824 8.4:+56614824 None:intergenic
AACCATCAATGCATGTTTGC+TGG 0.390697 8.4:+56615935 None:intergenic
TCTTTATGATGAAGCCAGTT+TGG 0.390868 8.4:+56615751 None:intergenic
GGAAGCTTTGATCAATTGTA+AGG 0.395095 8.4:-56616225 MS.gene78664:CDS
TCGAACTTCGAACATGGCTT+GGG 0.401179 8.4:+56616619 None:intergenic
GGTGTTTATGCAATCGAACT+TGG 0.413873 8.4:-56614672 MS.gene78664:CDS
ATGTCTTCCTTTAAGGCCTA+TGG 0.419251 8.4:-56616659 MS.gene78664:CDS
GCTTAACAAGGCTGCATCTT+CGG 0.420371 8.4:-56615818 MS.gene78664:CDS
GTCGGCTTTCTTCTTCAAAT+CGG 0.425906 8.4:+56615705 None:intergenic
TTCCGTAGATGTTGCATTCG+CGG 0.433043 8.4:+56614918 None:intergenic
ATCAAAATGAAGAACCAAAC+TGG 0.433147 8.4:-56615765 MS.gene78664:CDS
TATGCTGAATTTCAGAATGT+TGG 0.433530 8.4:-56614584 MS.gene78664:CDS
TTAAATGTTGCACCAGAAGC+AGG 0.437960 8.4:+56614449 None:intergenic
GTGGTGCTTCCATGAAGAAT+AGG 0.438477 8.4:-56614559 MS.gene78664:CDS
ACCCAAGGTAACCATCCATT+TGG 0.439713 8.4:+56614635 None:intergenic
ACCGTGATCTATGTGAAGAA+AGG 0.447852 8.4:-56615598 MS.gene78664:CDS
TTGTCCACAATTGTCCTCAT+TGG 0.452200 8.4:-56616563 MS.gene78664:CDS
GTGTTCTGCTGTCCTGGCAT+AGG 0.453171 8.4:+56614830 None:intergenic
TCCAAATGGATGGTTACCTT+GGG 0.459205 8.4:-56614636 MS.gene78664:CDS
GTCCAAATGGATGGTTACCT+TGG 0.461469 8.4:-56614637 MS.gene78664:CDS
AAGCACTCAACCAAGTTTCA+AGG 0.464276 8.4:+56616120 None:intergenic
AATTTCATTGCAAGAGACAT+AGG 0.466408 8.4:-56615076 MS.gene78664:CDS
TCAGCATAAAATATAGTATC+CGG 0.473076 8.4:+56614599 None:intergenic
TCCCTAATAAAAGTGACAAT+AGG 0.479786 8.4:-56615621 MS.gene78664:CDS
TGGTGCTTCCATGAAGAATA+GGG 0.495686 8.4:-56614558 MS.gene78664:CDS
TTGTCGCGAAAGACGGGAGT+GGG 0.497689 8.4:-56615678 MS.gene78664:CDS
AAACATATTTAGGTAGACCT+TGG 0.501761 8.4:-56614712 MS.gene78664:CDS
CCGTGATCTATGTGAAGAAA+GGG 0.502068 8.4:-56615597 MS.gene78664:CDS
GATTTATTATGAGAATGTTA+GGG 0.506310 8.4:-56615575 MS.gene78664:CDS
CAGAACACAATAACAGCACA+AGG 0.511799 8.4:-56614815 MS.gene78664:CDS
TGTCCTGGCATAGGTTGTCT+TGG 0.512818 8.4:+56614839 None:intergenic
ACATTGTTGTCGCGAAAGAC+GGG 0.518230 8.4:-56615684 MS.gene78664:CDS
AATGGATGGTTACCTTGGGT+TGG 0.521909 8.4:-56614632 MS.gene78664:CDS
GACATTGTTGTCGCGAAAGA+CGG 0.522332 8.4:-56615685 MS.gene78664:CDS
TTAAGTCCTTAAAAGTTCCA+TGG 0.523034 8.4:+56616273 None:intergenic
ACAGAACTCAGGTTTCCAAA+AGG 0.527425 8.4:+56614737 None:intergenic
AATAGCTCTTTGTCTTATGG+AGG 0.533210 8.4:-56616173 MS.gene78664:CDS
TGCTGACCCGGTTGAACAAG+AGG 0.534157 8.4:+56616377 None:intergenic
TTTCCTTCGAACTTCGAACA+TGG 0.534768 8.4:+56616613 None:intergenic
GTGTTTATGCAATCGAACTT+GGG 0.536740 8.4:-56614671 MS.gene78664:CDS
GAAGAATAGGGTCAAGTGGA+AGG 0.538939 8.4:-56614546 MS.gene78664:CDS
GACAATTTGAACAACTCCTC+GGG 0.540472 8.4:+56616347 None:intergenic
GTTCAAATTGTCGATTCAAG+TGG 0.542567 8.4:-56616336 MS.gene78664:CDS
TTGTCATTAGTGCTACTGCT+TGG 0.546362 8.4:+56615023 None:intergenic
AATGTTATGATTATTGGTGA+TGG 0.547054 8.4:-56615535 MS.gene78664:CDS
GTTGTTGAGTAATTCTTCCA+AGG 0.554426 8.4:+56614695 None:intergenic
CTTGTTAAGCCATGTGATGA+TGG 0.554658 8.4:+56615831 None:intergenic
AATGTTGCTGTTGAAAATGT+TGG 0.554684 8.4:+56615463 None:intergenic
ACGAGCATTGTTGTGAGCAA+CGG 0.555809 8.4:+56616514 None:intergenic
GCTGAATTTCAGAATGTTGG+AGG 0.560795 8.4:-56614581 MS.gene78664:CDS
CTTAGTCCTCTTGTTCAACC+GGG 0.562802 8.4:-56616383 MS.gene78664:CDS
CCCTTTCTTCACATAGATCA+CGG 0.563259 8.4:+56615597 None:intergenic
GTCTTTCGCGACAACAATGT+CGG 0.565235 8.4:+56615687 None:intergenic
GTTGTCGCGAAAGACGGGAG+TGG 0.565313 8.4:-56615679 MS.gene78664:CDS
AATACCAATGAGGACAATTG+TGG 0.566843 8.4:+56616559 None:intergenic
TTGTGATGTTACATTGTACA+AGG 0.567974 8.4:-56616423 MS.gene78664:CDS
CGACAATTTGAACAACTCCT+CGG 0.568069 8.4:+56616346 None:intergenic
TGATTCGTCGACTTTACCAT+AGG 0.568245 8.4:+56616643 None:intergenic
CATCATCACATGGCTTAACA+AGG 0.570892 8.4:-56615830 MS.gene78664:CDS
GCATTAACTGCAGTTTCGAA+AGG 0.570948 8.4:-56616314 MS.gene78664:CDS
TTACCAAGACAACCTATGCC+AGG 0.573972 8.4:-56614842 MS.gene78664:CDS
ATAGGCTTTAAGAACACAGC+TGG 0.577241 8.4:-56615058 MS.gene78664:CDS
CCGGTTGAACAAGAGGACTA+AGG 0.579986 8.4:+56616384 None:intergenic
TTATTATGAGAATGTTAGGG+TGG 0.582078 8.4:-56615572 MS.gene78664:CDS
TCGGGTCGTATTTGCTGACC+CGG 0.587545 8.4:+56616365 None:intergenic
TACCGCGAATGCAACATCTA+CGG 0.593477 8.4:-56614920 MS.gene78664:CDS
GTTCAGTATTTATCTGACCA+TGG 0.597410 8.4:-56616290 MS.gene78664:CDS
TAAATGTTGCACCAGAAGCA+GGG 0.599444 8.4:+56614450 None:intergenic
ATAGCTCTTTGTCTTATGGA+GGG 0.602541 8.4:-56616172 MS.gene78664:CDS
CCATGAAGAATAGGGTCAAG+TGG 0.608609 8.4:-56614550 MS.gene78664:CDS
AAGAATAGGGTCAAGTGGAA+GGG 0.609533 8.4:-56614545 MS.gene78664:CDS
AAGCCATGTTCGAAGTTCGA+AGG 0.613588 8.4:-56616616 MS.gene78664:CDS
GAATTTCAGAATGTTGGAGG+TGG 0.614077 8.4:-56614578 MS.gene78664:CDS
ACAGTCTTGCCATCATCACA+TGG 0.638538 8.4:-56615840 MS.gene78664:CDS
TTGGGTTGGAGATTCGGCGC+CGG 0.641411 8.4:-56614618 MS.gene78664:CDS
GAATTTGGATAATAGAACAA+AGG 0.642422 8.4:-56616246 MS.gene78664:CDS
ATAGGCCTTAAAGGAAGACA+TGG 0.648840 8.4:+56616661 None:intergenic
ACTGATCCTAACATGAACAC+AGG 0.655015 8.4:-56614788 MS.gene78664:CDS
GGCGCCGAATCTCCAACCCA+AGG 0.664024 8.4:+56614620 None:intergenic
GGGTCAGCAAATACGACCCG+AGG 0.685682 8.4:-56616363 MS.gene78664:CDS
TTGGAAGAATTACTCAACAA+CGG 0.709135 8.4:-56614693 MS.gene78664:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAACAATAAATTAATA+TGG + chr8.4:56615966-56615985 None:intergenic 10.0%
!! ATTACTTAATTTCAATTTAA+AGG + chr8.4:56615674-56615693 None:intergenic 10.0%
!!! AATTTATTGTTTCTTTTCTA+TGG - chr8.4:56615970-56615989 MS.gene78664:intron 15.0%
!!! TTATGTAATGTAGAATTTTA+TGG + chr8.4:56615108-56615127 None:intergenic 15.0%
!!! TTTTATGATTATTTCTTTGT+TGG + chr8.4:56615911-56615930 None:intergenic 15.0%
!! AAATGGAATGTTATGATTAT+TGG - chr8.4:56615554-56615573 MS.gene78664:CDS 20.0%
!! AGTTCTGTTAAAACATATTT+AGG - chr8.4:56616373-56616392 MS.gene78664:CDS 20.0%
!! GATTTATTATGAGAATGTTA+GGG - chr8.4:56615520-56615539 MS.gene78664:CDS 20.0%
! AATGTTATGATTATTGGTGA+TGG - chr8.4:56615560-56615579 MS.gene78664:CDS 25.0%
! ATATAAATTAACTTATGCCG+AGG + chr8.4:56615055-56615074 None:intergenic 25.0%
! ATGAATGTTACTATTGTTTC+TGG - chr8.4:56615584-56615603 MS.gene78664:CDS 25.0%
! GAATTTGGATAATAGAACAA+AGG - chr8.4:56614849-56614868 MS.gene78664:CDS 25.0%
! GCATTGTTTATTCATCTAAT+AGG - chr8.4:56615131-56615150 MS.gene78664:intron 25.0%
! GGATTTATTATGAGAATGTT+AGG - chr8.4:56615519-56615538 MS.gene78664:CDS 25.0%
! TAAGGACTTAAACTTGAATT+TGG - chr8.4:56614834-56614853 MS.gene78664:CDS 25.0%
! TCAGCATAAAATATAGTATC+CGG + chr8.4:56616499-56616518 None:intergenic 25.0%
! TTTAATATTCAGCTGTGTTT+GGG - chr8.4:56615993-56616012 MS.gene78664:intron 25.0%
!! ATCAATTGTAAGGATCTTTT+GGG - chr8.4:56614880-56614899 MS.gene78664:CDS 25.0%
!! ATTTTATTAGTCCAAATGGA+TGG - chr8.4:56616449-56616468 MS.gene78664:CDS 25.0%
!! GGAAATTTTATTAGTCCAAA+TGG - chr8.4:56616445-56616464 MS.gene78664:CDS 25.0%
!! GGAAGTCTTAATTTTATAGA+TGG - chr8.4:56615605-56615624 MS.gene78664:CDS 25.0%
!!! AATATGTTTTAACAGAACTC+AGG + chr8.4:56616372-56616391 None:intergenic 25.0%
!!! ATCTCTTTCAAGTTCAATTA+AGG - chr8.4:56614645-56614664 MS.gene78664:CDS 25.0%
!!! TCCTATTGTCACTTTTATTA+GGG + chr8.4:56615478-56615497 None:intergenic 25.0%
AAACATATTTAGGTAGACCT+TGG - chr8.4:56616383-56616402 MS.gene78664:CDS 30.0%
AATTTCATTGCAAGAGACAT+AGG - chr8.4:56616019-56616038 MS.gene78664:intron 30.0%
ATCAAAATGAAGAACCAAAC+TGG - chr8.4:56615330-56615349 MS.gene78664:intron 30.0%
ATGGTGTGTATGATATATGA+AGG + chr8.4:56615089-56615108 None:intergenic 30.0%
GTTTAATATTCAGCTGTGTT+TGG - chr8.4:56615992-56616011 MS.gene78664:intron 30.0%
TATGCTGAATTTCAGAATGT+TGG - chr8.4:56616511-56616530 MS.gene78664:CDS 30.0%
TCCATTAAGAAAAGCCTTAA+CGG + chr8.4:56616614-56616633 None:intergenic 30.0%
TCCCTAATAAAAGTGACAAT+AGG - chr8.4:56615474-56615493 MS.gene78664:CDS 30.0%
TTAAGTCCTTAAAAGTTCCA+TGG + chr8.4:56614825-56614844 None:intergenic 30.0%
TTATTATGAGAATGTTAGGG+TGG - chr8.4:56615523-56615542 MS.gene78664:CDS 30.0%
TTGAATAGCTCTTTGTCTTA+TGG - chr8.4:56614919-56614938 MS.gene78664:CDS 30.0%
TTGGAAGAATTACTCAACAA+CGG - chr8.4:56616402-56616421 MS.gene78664:CDS 30.0%
TTGTGATGTTACATTGTACA+AGG - chr8.4:56614672-56614691 MS.gene78664:CDS 30.0%
! AATGTTGCTGTTGAAAATGT+TGG + chr8.4:56615635-56615654 None:intergenic 30.0%
! ACATTTTCAACAGCAACATT+TGG - chr8.4:56615635-56615654 MS.gene78664:CDS 30.0%
! AGCTATAAATTTTGTGCATC+TGG + chr8.4:56615845-56615864 None:intergenic 30.0%
! AGTTTTCTACAAATGTTCGA+TGG - chr8.4:56616108-56616127 MS.gene78664:intron 30.0%
! CTTTTCTTAATGGAGATAGA+TGG - chr8.4:56616620-56616639 MS.gene78664:CDS 30.0%
! GATCAATTGTAAGGATCTTT+TGG - chr8.4:56614879-56614898 MS.gene78664:CDS 30.0%
! GCTATAAATTTTGTGCATCT+GGG + chr8.4:56615844-56615863 None:intergenic 30.0%
! GTCTTCTTTTCTTGATGTTT+TGG - chr8.4:56614948-56614967 MS.gene78664:CDS 30.0%
!! GTTGCAGTTTTGTAATACAA+CGG + chr8.4:56616230-56616249 None:intergenic 30.0%
!! TTCTTTTCTTGATGTTTTGG+AGG - chr8.4:56614951-56614970 MS.gene78664:CDS 30.0%
!!! GTCCTATTGTCACTTTTATT+AGG + chr8.4:56615479-56615498 None:intergenic 30.0%
!!! TTCTGTAGAGTTTTTGAGAT+TGG + chr8.4:56615225-56615244 None:intergenic 30.0%
AATACCAATGAGGACAATTG+TGG + chr8.4:56614539-56614558 None:intergenic 35.0%
AATAGCTCTTTGTCTTATGG+AGG - chr8.4:56614922-56614941 MS.gene78664:CDS 35.0%
AGCTCATAAGTTTACCGTTA+AGG - chr8.4:56616597-56616616 MS.gene78664:CDS 35.0%
ATAGCTCTTTGTCTTATGGA+GGG - chr8.4:56614923-56614942 MS.gene78664:CDS 35.0%
CTGCAAAAACAATACCAATG+AGG + chr8.4:56614549-56614568 None:intergenic 35.0%
GAAATTCCTGTGTTCATGTT+AGG + chr8.4:56616316-56616335 None:intergenic 35.0%
GTATGCAATATATTCGTCCT+CGG - chr8.4:56615035-56615054 MS.gene78664:CDS 35.0%
GTGTTTATGCAATCGAACTT+GGG - chr8.4:56616424-56616443 MS.gene78664:CDS 35.0%
GTTCAGTATTTATCTGACCA+TGG - chr8.4:56614805-56614824 MS.gene78664:CDS 35.0%
GTTGTTGAGTAATTCTTCCA+AGG + chr8.4:56616403-56616422 None:intergenic 35.0%
TCTTTATGATGAAGCCAGTT+TGG + chr8.4:56615347-56615366 None:intergenic 35.0%
TTAGGGTGGAAAAGACTAAA+TGG - chr8.4:56615537-56615556 MS.gene78664:CDS 35.0%
! ACCGTTAAGGCTTTTCTTAA+TGG - chr8.4:56616610-56616629 MS.gene78664:CDS 35.0%
! ATCTGACCATGGAACTTTTA+AGG - chr8.4:56614816-56614835 MS.gene78664:CDS 35.0%
! GGAAGCTTTGATCAATTGTA+AGG - chr8.4:56614870-56614889 MS.gene78664:CDS 35.0%
!! GGAACAGTCGATTTCATTTT+CGG - chr8.4:56616196-56616215 MS.gene78664:CDS 35.0%
!! GTTCAAATTGTCGATTCAAG+TGG - chr8.4:56614759-56614778 MS.gene78664:CDS 35.0%
!!! CATTGGTATTGTTTTTGCAG+CGG - chr8.4:56614549-56614568 MS.gene78664:CDS 35.0%
AACCATCAATGCATGTTTGC+TGG + chr8.4:56615163-56615182 None:intergenic 40.0%
AAGAATAGGGTCAAGTGGAA+GGG - chr8.4:56616550-56616569 MS.gene78664:CDS 40.0%
AAGCACTCAACCAAGTTTCA+AGG + chr8.4:56614978-56614997 None:intergenic 40.0%
ACAGAACTCAGGTTTCCAAA+AGG + chr8.4:56616361-56616380 None:intergenic 40.0%
ACCGTGATCTATGTGAAGAA+AGG - chr8.4:56615497-56615516 MS.gene78664:CDS 40.0%
ACTGATCCTAACATGAACAC+AGG - chr8.4:56616307-56616326 MS.gene78664:CDS 40.0%
AGCTTAAAATCTAGACCGTG+TGG - chr8.4:56615765-56615784 MS.gene78664:CDS 40.0%
CAGAACACAATAACAGCACA+AGG - chr8.4:56616280-56616299 MS.gene78664:CDS 40.0%
CATCATCACATGGCTTAACA+AGG - chr8.4:56615265-56615284 MS.gene78664:intron 40.0%
CCCTTTCTTCACATAGATCA+CGG + chr8.4:56615501-56615520 None:intergenic 40.0%
CCGTGATCTATGTGAAGAAA+GGG - chr8.4:56615498-56615517 MS.gene78664:CDS 40.0%
CGACAATTTGAACAACTCCT+CGG + chr8.4:56614752-56614771 None:intergenic 40.0%
CTTGTTAAGCCATGTGATGA+TGG + chr8.4:56615267-56615286 None:intergenic 40.0%
GAATTTCAGAATGTTGGAGG+TGG - chr8.4:56616517-56616536 MS.gene78664:CDS 40.0%
GACAATTTGAACAACTCCTC+GGG + chr8.4:56614751-56614770 None:intergenic 40.0%
GACTTTACCATAGGCCTTAA+AGG + chr8.4:56614446-56614465 None:intergenic 40.0%
GCATTAACTGCAGTTTCGAA+AGG - chr8.4:56614781-56614800 MS.gene78664:CDS 40.0%
GCTGAATTTCAGAATGTTGG+AGG - chr8.4:56616514-56616533 MS.gene78664:CDS 40.0%
GGTGTTTATGCAATCGAACT+TGG - chr8.4:56616423-56616442 MS.gene78664:CDS 40.0%
TAAAATCTAGACCGTGTGGT+CGG - chr8.4:56615769-56615788 MS.gene78664:CDS 40.0%
TAAATGTTGCACCAGAAGCA+GGG + chr8.4:56616648-56616667 None:intergenic 40.0%
TACATGCAGACTGACATATC+AGG + chr8.4:56615796-56615815 None:intergenic 40.0%
TACCAGCAAACATGCATTGA+TGG - chr8.4:56615158-56615177 MS.gene78664:intron 40.0%
TCCAAATGGATGGTTACCTT+GGG - chr8.4:56616459-56616478 MS.gene78664:CDS 40.0%
TGGTGCTTCCATGAAGAATA+GGG - chr8.4:56616537-56616556 MS.gene78664:CDS 40.0%
TTAAATGTTGCACCAGAAGC+AGG + chr8.4:56616649-56616668 None:intergenic 40.0%
TTGTCCACAATTGTCCTCAT+TGG - chr8.4:56614532-56614551 MS.gene78664:CDS 40.0%
TTTCCTTCGAACTTCGAACA+TGG + chr8.4:56614485-56614504 None:intergenic 40.0%
! AATTGCAATGTGTCGCCTTT+TGG - chr8.4:56616343-56616362 MS.gene78664:CDS 40.0%
! CACGGTCTAGATTTTAAGCT+CGG + chr8.4:56615765-56615784 None:intergenic 40.0%
! GTCGGCTTTCTTCTTCAAAT+CGG + chr8.4:56615393-56615412 None:intergenic 40.0%
! TTGTCATTAGTGCTACTGCT+TGG + chr8.4:56616075-56616094 None:intergenic 40.0%
!! ATAGGCTTTAAGAACACAGC+TGG - chr8.4:56616037-56616056 MS.gene78664:intron 40.0%
!! ATGTCTTCCTTTAAGGCCTA+TGG - chr8.4:56614436-56614455 MS.gene78664:CDS 40.0%
!! TGATTCGTCGACTTTACCAT+AGG + chr8.4:56614455-56614474 None:intergenic 40.0%
!! TTTTGGAGGACCTTGAAACT+TGG - chr8.4:56614965-56614984 MS.gene78664:CDS 40.0%
!!! ATTGTTTTTGCAGCGGTGTT+TGG - chr8.4:56614556-56614575 MS.gene78664:CDS 40.0%
AAGCCATGTTCGAAGTTCGA+AGG - chr8.4:56614479-56614498 MS.gene78664:CDS 45.0%
AATGGATGGTTACCTTGGGT+TGG - chr8.4:56616463-56616482 MS.gene78664:CDS 45.0%
ACAGTCTTGCCATCATCACA+TGG - chr8.4:56615255-56615274 MS.gene78664:intron 45.0%
ACATTGTTGTCGCGAAAGAC+GGG - chr8.4:56615411-56615430 MS.gene78664:intron 45.0%
ACCCAAGGTAACCATCCATT+TGG + chr8.4:56616463-56616482 None:intergenic 45.0%
CCACTTGACCCTATTCTTCA+TGG + chr8.4:56616548-56616567 None:intergenic 45.0%
CCATGAAGAATAGGGTCAAG+TGG - chr8.4:56616545-56616564 MS.gene78664:CDS 45.0%
CCTTAGTCCTCTTGTTCAAC+CGG - chr8.4:56614711-56614730 MS.gene78664:CDS 45.0%
CTTAGTCCTCTTGTTCAACC+GGG - chr8.4:56614712-56614731 MS.gene78664:CDS 45.0%
GAAACTTGGTTGAGTGCTTC+AGG - chr8.4:56614979-56614998 MS.gene78664:CDS 45.0%
GAAGAATAGGGTCAAGTGGA+AGG - chr8.4:56616549-56616568 MS.gene78664:CDS 45.0%
GACATTGTTGTCGCGAAAGA+CGG - chr8.4:56615410-56615429 MS.gene78664:intron 45.0%
GCTTAACAAGGCTGCATCTT+CGG - chr8.4:56615277-56615296 MS.gene78664:intron 45.0%
GTCCAAATGGATGGTTACCT+TGG - chr8.4:56616458-56616477 MS.gene78664:CDS 45.0%
GTCTTTCGCGACAACAATGT+CGG + chr8.4:56615411-56615430 None:intergenic 45.0%
GTGGTGCTTCCATGAAGAAT+AGG - chr8.4:56616536-56616555 MS.gene78664:CDS 45.0%
GTTATTGTGTTCTGCTGTCC+TGG + chr8.4:56616274-56616293 None:intergenic 45.0%
TACCGCGAATGCAACATCTA+CGG - chr8.4:56616175-56616194 MS.gene78664:CDS 45.0%
TCAGTCTGCATGTAGTCACA+AGG - chr8.4:56615802-56615821 MS.gene78664:CDS 45.0%
TCGAACTTCGAACATGGCTT+GGG + chr8.4:56614479-56614498 None:intergenic 45.0%
TGTTGCATTCGCGGTAGAAT+TGG + chr8.4:56616171-56616190 None:intergenic 45.0%
TTACCAAGACAACCTATGCC+AGG - chr8.4:56616253-56616272 MS.gene78664:CDS 45.0%
TTCCGTAGATGTTGCATTCG+CGG + chr8.4:56616180-56616199 None:intergenic 45.0%
TTCGAACTTCGAACATGGCT+TGG + chr8.4:56614480-56614499 None:intergenic 45.0%
! ACGAGCATTGTTGTGAGCAA+CGG + chr8.4:56614584-56614603 None:intergenic 45.0%
!! GTTACCTTGGGTTGGAGATT+CGG - chr8.4:56616471-56616490 MS.gene78664:CDS 45.0%
!!! GCTACTGCTTGGTGTTTTTG+AGG + chr8.4:56616064-56616083 None:intergenic 45.0%
ACATATCAGGACCGACCACA+CGG + chr8.4:56615783-56615802 None:intergenic 50.0%
CCGGTTGAACAAGAGGACTA+AGG + chr8.4:56614714-56614733 None:intergenic 50.0%
GATAGATGGATCCCTGCTTC+TGG - chr8.4:56616634-56616653 MS.gene78664:CDS 50.0%
TGTCCTGGCATAGGTTGTCT+TGG + chr8.4:56616259-56616278 None:intergenic 50.0%
GTGTTCTGCTGTCCTGGCAT+AGG + chr8.4:56616268-56616287 None:intergenic 55.0%
TGCTGACCCGGTTGAACAAG+AGG + chr8.4:56614721-56614740 None:intergenic 55.0%
TTGTCGCGAAAGACGGGAGT+GGG - chr8.4:56615417-56615436 MS.gene78664:intron 55.0%
! TCGGGTCGTATTTGCTGACC+CGG + chr8.4:56614733-56614752 None:intergenic 55.0%
GGGTCAGCAAATACGACCCG+AGG - chr8.4:56614732-56614751 MS.gene78664:CDS 60.0%
GTTGTCGCGAAAGACGGGAG+TGG - chr8.4:56615416-56615435 MS.gene78664:intron 60.0%
!! TTGGGTTGGAGATTCGGCGC+CGG - chr8.4:56616477-56616496 MS.gene78664:CDS 60.0%
! GGCGCCGAATCTCCAACCCA+AGG + chr8.4:56616478-56616497 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 56614436 56616681 56614436 ID=MS.gene78664
chr8.4 mRNA 56614436 56616681 56614436 ID=MS.gene78664.t1;Parent=MS.gene78664
chr8.4 exon 56616117 56616681 56616117 ID=MS.gene78664.t1.exon1;Parent=MS.gene78664.t1
chr8.4 CDS 56616117 56616681 56616117 ID=cds.MS.gene78664.t1;Parent=MS.gene78664.t1
chr8.4 exon 56615461 56615964 56615461 ID=MS.gene78664.t1.exon2;Parent=MS.gene78664.t1
chr8.4 CDS 56615461 56615964 56615461 ID=cds.MS.gene78664.t1;Parent=MS.gene78664.t1
chr8.4 exon 56614436 56615112 56614436 ID=MS.gene78664.t1.exon3;Parent=MS.gene78664.t1
chr8.4 CDS 56614436 56615112 56614436 ID=cds.MS.gene78664.t1;Parent=MS.gene78664.t1
Gene Sequence

>MS.gene78664

ATGTCTTCCTTTAAGGCCTATGGTAAAGTCGACGAATCAGCCCAAGCCATGTTCGAAGTTCGAAGGAAATCGCGAAAGCGAATAACTATCATAAGCTTGTCCACAATTGTCCTCATTGGTATTGTTTTTGCAGCGGTGTTTGGAACCGTTGCTCACAACAATGCTCGTAATGATGACAACAACAACAACAATAATGATAACGATGATCAATCTCTTTCAAGTTCAATTAAGGCTGTTTGTGATGTTACATTGTACAAGGATTCATGTCTAAGCAGCCTTAGTCCTCTTGTTCAACCGGGTCAGCAAATACGACCCGAGGAGTTGTTCAAATTGTCGATTCAAGTGGCATTAACTGCAGTTTCGAAAGGTGTTCAGTATTTATCTGACCATGGAACTTTTAAGGACTTAAACTTGAATTTGGATAATAGAACAAAGGAAGCTTTGATCAATTGTAAGGATCTTTTGGGTCTTGCTGTTGATCATTTGAATAGCTCTTTGTCTTATGGAGGGAAGTCTTCTTTTCTTGATGTTTTGGAGGACCTTGAAACTTGGTTGAGTGCTTCAGGTAAACTTTATAATTAAGCATTTATATACTTTCTGTATGCAATATATTCGTCCTCGGCATAAGTTAATTTATATTTTATAATTCTCCTTCATATATCATACACACCATAAAATTCTACATTACATAACAAGCATTGTTTATTCATCTAATAGGTACTTACCAGCAAACATGCATTGATGGTTTAGAACTAGCAGAAGAAGCATTAAAGTCTAGTATTACAACCAATCTCAAAAACTCTACAGAATTTACGAGCAACAGTCTTGCCATCATCACATGGCTTAACAAGGCTGCATCTTCGGTGAACTTTAGACGCTTATTGAGTTTATCGCATCAAAATGAAGAACCAAACTGGCTTCATCATAAAGACAGAAAGTTACTTCAAAAAGACACCGATTTGAAGAAGAAAGCCGACATTGTTGTCGCGAAAGACGGGAGTGGGAAATACAAAACAATTTCAGCTGCATTGAAACATGTCCCTAATAAAAGTGACAATAGGACCGTGATCTATGTGAAGAAAGGGATTTATTATGAGAATGTTAGGGTGGAAAAGACTAAATGGAATGTTATGATTATTGGTGATGGAATGAATGTTACTATTGTTTCTGGAAGTCTTAATTTTATAGATGGCACACCAACATTTTCAACAGCAACATTTGGTATATCAAACTTTCCTTTAAATTGAAATTAAGTAATTATATACAACATTTTTTCGATTCAGATTTCAATGCTGATTTTTTATAGTTTTTTTGAGAATTAAAACACCGAGCTTAAAATCTAGACCGTGTGGTCGGTCCTGATATGTCAGTCTGCATGTAGTCACAAGGTTGTGAATGCACACAACCCAGATGCACAAAATTTATAGCTATTCTATTTCTTTTTGCGTATCAATTTGAAAACTTCTTATTCTCCAACAAAGAAATAATCATAAAAAATCTTTTAACATGATTTATAAAACTGTCTAACCATATTAATTTATTGTTTCTTTTCTATGGTTTAATATTCAGCTGTGTTTGGGAGAAATTTCATTGCAAGAGACATAGGCTTTAAGAACACAGCTGGTCCTCAAAAACACCAAGCAGTAGCACTAATGACAAGTGCAGATCAAGCAGTTTTCTACAAATGTTCGATGGATGCATATCAAGACACTCTCTACGCTCACTCAAATCGCCAATTCTACCGCGAATGCAACATCTACGGAACAGTCGATTTCATTTTCGGAAACTCAGCCGTTGTATTACAAAACTGCAACATTTTACCAAGACAACCTATGCCAGGACAGCAGAACACAATAACAGCACAAGGCAAAACTGATCCTAACATGAACACAGGAATTTCAATTCAAAATTGCAATGTGTCGCCTTTTGGAAACCTGAGTTCTGTTAAAACATATTTAGGTAGACCTTGGAAGAATTACTCAACAACGGTGTTTATGCAATCGAACTTGGGAAATTTTATTAGTCCAAATGGATGGTTACCTTGGGTTGGAGATTCGGCGCCGGATACTATATTTTATGCTGAATTTCAGAATGTTGGAGGTGGTGCTTCCATGAAGAATAGGGTCAAGTGGAAGGGTTTGAAAACTATTACAAGTAAACAAGCTCATAAGTTTACCGTTAAGGCTTTTCTTAATGGAGATAGATGGATCCCTGCTTCTGGTGCAACATTTAAATCTTCTCTGTAA
Protein sequence

>MS.gene78664.t1

MSSFKAYGKVDESAQAMFEVRRKSRKRITIISLSTIVLIGIVFAAVFGTVAHNNARNDDNNNNNNDNDDQSLSSSIKAVCDVTLYKDSCLSSLSPLVQPGQQIRPEELFKLSIQVALTAVSKGVQYLSDHGTFKDLNLNLDNRTKEALINCKDLLGLAVDHLNSSLSYGGKSSFLDVLEDLETWLSASGTYQQTCIDGLELAEEALKSSITTNLKNSTEFTSNSLAIITWLNKAASSVNFRRLLSLSHQNEEPNWLHHKDRKLLQKDTDLKKKADIVVAKDGSGKYKTISAALKHVPNKSDNRTVIYVKKGIYYENVRVEKTKWNVMIIGDGMNVTIVSGSLNFIDGTPTFSTATFAVFGRNFIARDIGFKNTAGPQKHQAVALMTSADQAVFYKCSMDAYQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVLQNCNILPRQPMPGQQNTITAQGKTDPNMNTGISIQNCNVSPFGNLSSVKTYLGRPWKNYSTTVFMQSNLGNFISPNGWLPWVGDSAPDTIFYAEFQNVGGGASMKNRVKWKGLKTITSKQAHKFTVKAFLNGDRWIPASGATFKSSL