Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78841.t1 | XP_003598180.1 | 94.6 | 353 | 19 | 0 | 1 | 353 | 1 | 353 | 1.40E-191 | 678.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78841.t1 | Q56W64 | 71.6 | 356 | 93 | 3 | 3 | 353 | 7 | 359 | 8.1e-143 | 508.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78841.t1 | G7IVL2 | 94.6 | 353 | 19 | 0 | 1 | 353 | 1 | 353 | 1.0e-191 | 678.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052302 | MS.gene78841 | 0.807162 | 5.78E-50 | -1.69E-46 |
| MS.gene052376 | MS.gene78841 | 0.808003 | 3.83E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78841.t1 | MTR_3g008180 | 94.618 | 353 | 19 | 0 | 1 | 353 | 1 | 353 | 0.0 | 702 |
| MS.gene78841.t1 | MTR_3g008180 | 96.063 | 254 | 10 | 0 | 100 | 353 | 1 | 254 | 0.0 | 517 |
| MS.gene78841.t1 | MTR_4g109900 | 29.528 | 254 | 150 | 9 | 77 | 326 | 66 | 294 | 2.08e-17 | 82.4 |
| MS.gene78841.t1 | MTR_1g094030 | 27.083 | 288 | 160 | 11 | 77 | 349 | 67 | 319 | 3.29e-16 | 79.0 |
| MS.gene78841.t1 | MTR_8g031580 | 27.843 | 255 | 142 | 9 | 75 | 304 | 80 | 317 | 4.22e-15 | 75.9 |
| MS.gene78841.t1 | MTR_8g031580 | 27.843 | 255 | 142 | 9 | 75 | 304 | 80 | 317 | 8.22e-15 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78841.t1 | AT5G61540 | 73.235 | 340 | 84 | 2 | 19 | 353 | 22 | 359 | 0.0 | 519 |
| MS.gene78841.t1 | AT5G61540 | 72.201 | 259 | 65 | 2 | 100 | 353 | 1 | 257 | 2.26e-137 | 391 |
| MS.gene78841.t1 | AT5G61540 | 72.201 | 259 | 65 | 2 | 100 | 353 | 1 | 257 | 2.26e-137 | 391 |
| MS.gene78841.t1 | AT4G00590 | 28.731 | 268 | 143 | 11 | 50 | 290 | 55 | 301 | 2.75e-13 | 70.9 |
Find 95 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCATCCTTAGCAGCAATTT+TGG | 0.125616 | 3.1:+3760699 | None:intergenic |
| TGTCGTTGCCCTAAATAAAA+TGG | 0.230500 | 3.1:-3760635 | MS.gene78841:CDS |
| GTAGCTGCCAACCGAATTTC+AGG | 0.266998 | 3.1:-3762481 | MS.gene78841:CDS |
| ACTGAACACACTTTGCTTGT+AGG | 0.298730 | 3.1:-3762602 | MS.gene78841:CDS |
| GCATATGCAATAGACGAAAT+TGG | 0.333820 | 3.1:-3761059 | MS.gene78841:CDS |
| TCTGATGAACTCAAGTTTGT+AGG | 0.352438 | 3.1:+3762536 | None:intergenic |
| AGGAAATATATAGGTGACTA+TGG | 0.352551 | 3.1:-3762696 | MS.gene78841:intron |
| GCAATATCAATGGGTCTTCC+AGG | 0.364652 | 3.1:-3762560 | MS.gene78841:CDS |
| GCAGCTACTATATTTCCATT+TGG | 0.371718 | 3.1:+3762496 | None:intergenic |
| CTTATTCTAAACAGTTGGTC+CGG | 0.377656 | 3.1:-3762874 | MS.gene78841:intron |
| GTAGTTTCTCCATTCTCATC+TGG | 0.379446 | 3.1:+3762843 | None:intergenic |
| CCACCTCTCTTTACTCTCTC+TGG | 0.379677 | 3.1:-3764720 | MS.gene78841:intron |
| GGGGCATGAACGTGTGGAAT+TGG | 0.390529 | 3.1:-3764535 | MS.gene78841:CDS |
| TACGGACCACAATTATTTGC+AGG | 0.399381 | 3.1:+3762446 | None:intergenic |
| ACGACAGCTCCCACAAAGTC+TGG | 0.401745 | 3.1:+3760652 | None:intergenic |
| GTCGTTGCCCTAAATAAAAT+GGG | 0.402550 | 3.1:-3760634 | MS.gene78841:CDS |
| GCTGTTGATGCCGTTGTTGA+AGG | 0.404504 | 3.1:-3764429 | MS.gene78841:CDS |
| GGGGCAACATTCAAGATTCC+TGG | 0.416541 | 3.1:-3762173 | MS.gene78841:CDS |
| ATCAGAATTTGCAATATCAA+TGG | 0.421854 | 3.1:-3762570 | MS.gene78841:CDS |
| GCTCTTACAGCTTCAATAAA+CGG | 0.426024 | 3.1:+3764483 | None:intergenic |
| GCTGTTGGCACATCAACAAA+TGG | 0.433897 | 3.1:-3762194 | MS.gene78841:CDS |
| CATCAGAATCTATAGAGAAA+TGG | 0.440774 | 3.1:-3762520 | MS.gene78841:CDS |
| GCATGGAGAGCTGTTGATGC+TGG | 0.441857 | 3.1:-3764459 | MS.gene78841:CDS |
| GAACATGCTGGTGCCTGCCA+TGG | 0.447314 | 3.1:-3760610 | MS.gene78841:CDS |
| CTATAGAGAAATGGACCAAA+TGG | 0.448660 | 3.1:-3762511 | MS.gene78841:CDS |
| ATTGGCGCATGTTGTGCAAC+TGG | 0.451509 | 3.1:-3761041 | MS.gene78841:CDS |
| AGAAACTACAATGGATGCTT+TGG | 0.454747 | 3.1:-3762829 | MS.gene78841:CDS |
| AGATGAGACTGTTGTTGATT+GGG | 0.456383 | 3.1:-3764754 | MS.gene78841:CDS |
| AAGATGAGACTGTTGTTGAT+TGG | 0.456683 | 3.1:-3764755 | MS.gene78841:CDS |
| GTAGGTGATGGTCCCATAGC+TGG | 0.456714 | 3.1:-3761089 | MS.gene78841:CDS |
| GAGAGTTCAACATAATTAGT+TGG | 0.461737 | 3.1:+3762419 | None:intergenic |
| GCTCCACCTGTGAGCAACTT+GGG | 0.462998 | 3.1:-3764404 | MS.gene78841:CDS |
| CTTGATTGTAGGGTAGGTGA+TGG | 0.463534 | 3.1:-3761101 | MS.gene78841:intron |
| TGCTCCACCTGTGAGCAACT+TGG | 0.465430 | 3.1:-3764405 | MS.gene78841:CDS |
| CTGTTGGCACATCAACAAAT+GGG | 0.468649 | 3.1:-3762193 | MS.gene78841:CDS |
| GGACATTTAAATATTCAGTA+AGG | 0.479555 | 3.1:-3760585 | MS.gene78841:CDS |
| TCATGATGCGCTTTCTTCCA+TGG | 0.486614 | 3.1:-3761007 | MS.gene78841:intron |
| GAACTCAAGTTTGTAGGTCC+TGG | 0.489113 | 3.1:+3762542 | None:intergenic |
| TCAGAATTTGCAATATCAAT+GGG | 0.497562 | 3.1:-3762569 | MS.gene78841:CDS |
| GGAACCCAAAATTGCTGCTA+AGG | 0.504227 | 3.1:-3760704 | MS.gene78841:CDS |
| CACCGACAAGATTACCTGCC+AGG | 0.508266 | 3.1:+3762155 | None:intergenic |
| TTTAAATGTCCAACCATGGC+AGG | 0.508674 | 3.1:+3760597 | None:intergenic |
| ATGGATGCTTTGGTCATGGA+TGG | 0.514821 | 3.1:-3762819 | MS.gene78841:CDS |
| TTCTAAACAGTTGGTCCGGG+TGG | 0.516999 | 3.1:-3762870 | MS.gene78841:intron |
| TAGATGGGGCACATTGCTGT+TGG | 0.518391 | 3.1:-3762209 | MS.gene78841:CDS |
| AGTTGTGGAAAGCATGAGGT+TGG | 0.519908 | 3.1:-3760731 | MS.gene78841:CDS |
| GGCCATGTGCTCACAACCAA+TGG | 0.523026 | 3.1:+3764504 | None:intergenic |
| CAGCCACGATACTATATCAA+TGG | 0.527672 | 3.1:-3762333 | MS.gene78841:CDS |
| ACATAATTAGTTGGACGATA+CGG | 0.530119 | 3.1:+3762428 | None:intergenic |
| ATGCTGGTGCCTGCCATGGT+TGG | 0.532426 | 3.1:-3760606 | MS.gene78841:CDS |
| GTTGTGGAAAGCATGAGGTT+GGG | 0.534421 | 3.1:-3760730 | MS.gene78841:CDS |
| TTATTCTAAACAGTTGGTCC+GGG | 0.536320 | 3.1:-3762873 | MS.gene78841:intron |
| CAACTTGGGTGTGATGGAAC+AGG | 0.536487 | 3.1:-3764390 | MS.gene78841:intron |
| TGCATCCTTTACATATCTCA+TGG | 0.539883 | 3.1:+3762655 | None:intergenic |
| GCATGTTGTGCAACTGGGGA+TGG | 0.555352 | 3.1:-3761035 | MS.gene78841:CDS |
| ATCCATTGGTTGTGAGCACA+TGG | 0.555967 | 3.1:-3764506 | MS.gene78841:CDS |
| ATATGCTGAGGATCCAGCTA+TGG | 0.556654 | 3.1:+3761076 | None:intergenic |
| GTATTTCCTGCAAATAATTG+TGG | 0.558705 | 3.1:-3762452 | MS.gene78841:CDS |
| TACAATGGATGCTTTGGTCA+TGG | 0.561607 | 3.1:-3762823 | MS.gene78841:CDS |
| TGGATGCTTTGGTCATGGAT+GGG | 0.562917 | 3.1:-3762818 | MS.gene78841:CDS |
| ATATTAAGATTACCGCATGT+TGG | 0.563653 | 3.1:-3762362 | MS.gene78841:CDS |
| GGATGCTTTGGTCATGGATG+GGG | 0.564406 | 3.1:-3762817 | MS.gene78841:intron |
| GGTGGGAGTCCAGATGAGAA+TGG | 0.564693 | 3.1:-3762852 | MS.gene78841:CDS |
| TGTGAGCAACTTGGGTGTGA+TGG | 0.564875 | 3.1:-3764396 | MS.gene78841:CDS |
| GGTGGAGCAACCTTCAACAA+CGG | 0.566794 | 3.1:+3764419 | None:intergenic |
| TATGCTGAGGATCCAGCTAT+GGG | 0.571274 | 3.1:+3761077 | None:intergenic |
| TTCTCATCTGGACTCCCACC+CGG | 0.571410 | 3.1:+3762855 | None:intergenic |
| CAATTTCAGCTATCAAGTTG+TGG | 0.572013 | 3.1:-3760746 | MS.gene78841:intron |
| ATATAGGTGACTATGGAAGT+AGG | 0.574493 | 3.1:-3762689 | MS.gene78841:intron |
| ATCACACCCAAGTTGCTCAC+AGG | 0.580548 | 3.1:+3764398 | None:intergenic |
| GGAAAGCATGAGGTTGGGAA+TGG | 0.585466 | 3.1:-3760725 | MS.gene78841:CDS |
| TCTAAACAGTTGGTCCGGGT+GGG | 0.591402 | 3.1:-3762869 | MS.gene78841:intron |
| TTCGTCTATTGCATATGCTG+AGG | 0.593387 | 3.1:+3761064 | None:intergenic |
| TTGGCGCATGTTGTGCAACT+GGG | 0.593507 | 3.1:-3761040 | MS.gene78841:CDS |
| CCAGAGAGAGTAAAGAGAGG+TGG | 0.595623 | 3.1:+3764720 | None:intergenic |
| CAACATTCAAGATTCCTGGC+AGG | 0.601893 | 3.1:-3762169 | MS.gene78841:intron |
| TTGAAGCTGTAAGAGCTGCA+TGG | 0.604605 | 3.1:-3764476 | MS.gene78841:CDS |
| ACACCCAAGTTGCTCACAGG+TGG | 0.608502 | 3.1:+3764401 | None:intergenic |
| TTTGATGATAATAAGGTGGT+GGG | 0.609320 | 3.1:-3764555 | MS.gene78841:intron |
| AGGATGCAATCAAAGCTGCT+AGG | 0.613622 | 3.1:-3762640 | MS.gene78841:CDS |
| TGAGAATGGAGAAACTACAA+TGG | 0.616235 | 3.1:-3762838 | MS.gene78841:CDS |
| GGTGGTGGGGCATGAACGTG+TGG | 0.617503 | 3.1:-3764541 | MS.gene78841:CDS |
| GGAATTGGAACAGTATCCAT+TGG | 0.635696 | 3.1:-3764520 | MS.gene78841:CDS |
| AATATTTAAATGTCCAACCA+TGG | 0.637470 | 3.1:+3760593 | None:intergenic |
| TCGTTGCCCTAAATAAAATG+GGG | 0.646761 | 3.1:-3760633 | MS.gene78841:CDS |
| ATCAAGTTGTGGAAAGCATG+AGG | 0.654297 | 3.1:-3760735 | MS.gene78841:CDS |
| TGCCGCCATGAGATATGTAA+AGG | 0.658418 | 3.1:-3762660 | MS.gene78841:CDS |
| CGTTGCCCTAAATAAAATGG+GGG | 0.664852 | 3.1:-3760632 | MS.gene78841:CDS |
| CAGCCATTGATATAGTATCG+TGG | 0.690258 | 3.1:+3762330 | None:intergenic |
| TGGCGCATGTTGTGCAACTG+GGG | 0.694324 | 3.1:-3761039 | MS.gene78841:CDS |
| TGTTGGCACATCAACAAATG+GGG | 0.696228 | 3.1:-3762192 | MS.gene78841:CDS |
| ATCCTTTACATATCTCATGG+CGG | 0.711353 | 3.1:+3762658 | None:intergenic |
| TGGCTGTGAAGACCAACATG+CGG | 0.723486 | 3.1:+3762350 | None:intergenic |
| GTACCAGAGAGAGTAAAGAG+AGG | 0.729668 | 3.1:+3764717 | None:intergenic |
| TTGATGATAATAAGGTGGTG+GGG | 0.741205 | 3.1:-3764554 | MS.gene78841:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAAAATATAAATAAA+TGG | + | chr3.1:3763266-3763285 | None:intergenic | 0.0% |
| !! | TTAAAATTGTATAGTAATAT+TGG | - | chr3.1:3764383-3764402 | MS.gene78841:intron | 10.0% |
| !!! | ATAAGTTTTTTTTCATAATA+AGG | - | chr3.1:3761531-3761550 | MS.gene78841:intron | 10.0% |
| !! | AAATATAAATAAATGGATAG+TGG | + | chr3.1:3763259-3763278 | None:intergenic | 15.0% |
| !!! | AAGTGAATATCTTTTTTTTT+TGG | - | chr3.1:3761167-3761186 | MS.gene78841:intron | 15.0% |
| !!! | ATACAATTTTAATATTGAGA+AGG | + | chr3.1:3764375-3764394 | None:intergenic | 15.0% |
| !!! | CTAAAAATGCAAATTTTTAT+TGG | + | chr3.1:3763780-3763799 | None:intergenic | 15.0% |
| !!! | TTAAATTTTCACCAAAAAAA+GGG | + | chr3.1:3760693-3760712 | None:intergenic | 15.0% |
| !!! | TTGGTGAAAATTTAAATTTT+GGG | - | chr3.1:3760698-3760717 | MS.gene78841:CDS | 15.0% |
| !!! | TTTAAATTTTCACCAAAAAA+AGG | + | chr3.1:3760694-3760713 | None:intergenic | 15.0% |
| !!! | TTTAATTTTATCTTTTCTGT+TGG | - | chr3.1:3763277-3763296 | MS.gene78841:intron | 15.0% |
| !!! | TTTGGTGAAAATTTAAATTT+TGG | - | chr3.1:3760697-3760716 | MS.gene78841:CDS | 15.0% |
| !! | AAACTTAGATAGTGATTAAT+TGG | - | chr3.1:3763934-3763953 | MS.gene78841:intron | 20.0% |
| !! | ATCAAATGATAAAAGAAAAG+TGG | - | chr3.1:3763877-3763896 | MS.gene78841:intron | 20.0% |
| !! | ATGCATTTATTGAATAAGAT+AGG | + | chr3.1:3761411-3761430 | None:intergenic | 20.0% |
| !! | ATTATCTTATTCTAAACAGT+TGG | - | chr3.1:3762413-3762432 | MS.gene78841:CDS | 20.0% |
| !! | ATTGTTCTTTGTTAATAGAA+AGG | - | chr3.1:3762260-3762279 | MS.gene78841:intron | 20.0% |
| !! | GAAAAAAAAAATAGCTTGAA+AGG | + | chr3.1:3763218-3763237 | None:intergenic | 20.0% |
| !! | GATACATACTAAAATTTGTA+TGG | - | chr3.1:3764019-3764038 | MS.gene78841:intron | 20.0% |
| !! | TAAGAATTAGTATTGTGATT+TGG | - | chr3.1:3762019-3762038 | MS.gene78841:intron | 20.0% |
| !! | TATACAAAGTTGACAAAAAA+GGG | - | chr3.1:3763905-3763924 | MS.gene78841:intron | 20.0% |
| !! | TATGATTTCTACTGTAATTT+GGG | + | chr3.1:3763432-3763451 | None:intergenic | 20.0% |
| !! | TTGTTCTTTGTTAATAGAAA+GGG | - | chr3.1:3762261-3762280 | MS.gene78841:intron | 20.0% |
| !!! | AATACATTTTTCCTGAAATT+CGG | + | chr3.1:3762825-3762844 | None:intergenic | 20.0% |
| !!! | AATTATTTTGAGGTTCATAT+TGG | + | chr3.1:3763841-3763860 | None:intergenic | 20.0% |
| !!! | ATACTCAAATTCAACAATTT+TGG | - | chr3.1:3760645-3760664 | MS.gene78841:CDS | 20.0% |
| !!! | ATGACAGTTTTTTTTTTTTG+TGG | - | chr3.1:3763058-3763077 | MS.gene78841:intron | 20.0% |
| !!! | CACAATCTTTAATTATTTTG+AGG | + | chr3.1:3763851-3763870 | None:intergenic | 20.0% |
| !!! | GAATTTTTTTCTTGATTGTA+GGG | - | chr3.1:3764181-3764200 | MS.gene78841:intron | 20.0% |
| !!! | TAGTTAATAGATTAGTTAGT+GGG | + | chr3.1:3763566-3763585 | None:intergenic | 20.0% |
| !!! | TATTTGATTTTCATAAGTAC+TGG | + | chr3.1:3762913-3762932 | None:intergenic | 20.0% |
| !!! | TGAATTTTTTTCTTGATTGT+AGG | - | chr3.1:3764180-3764199 | MS.gene78841:intron | 20.0% |
| !!! | TTAGTTAATAGATTAGTTAG+TGG | + | chr3.1:3763567-3763586 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGTGGTTTAGAT+GGG | - | chr3.1:3763068-3763087 | MS.gene78841:intron | 20.0% |
| !!! | TTTTTTTTTTGTGGTTTAGA+TGG | - | chr3.1:3763067-3763086 | MS.gene78841:intron | 20.0% |
| ! | AAACTTATGATATGTCCATA+AGG | + | chr3.1:3761519-3761538 | None:intergenic | 25.0% |
| ! | AAAGTTTATGCATAAGTACA+AGG | + | chr3.1:3761825-3761844 | None:intergenic | 25.0% |
| ! | AAGTTTATGCATAAGTACAA+GGG | + | chr3.1:3761824-3761843 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | - | chr3.1:3761704-3761723 | MS.gene78841:intron | 25.0% |
| ! | AATATTTAAATGTCCAACCA+TGG | + | chr3.1:3764702-3764721 | None:intergenic | 25.0% |
| ! | AATGTATATGATAGAGACAT+AGG | - | chr3.1:3763400-3763419 | MS.gene78841:intron | 25.0% |
| ! | AGTAAATTGAAGACAACTTA+TGG | - | chr3.1:3761874-3761893 | MS.gene78841:intron | 25.0% |
| ! | AGTGCTTAATTGAGTTAAAA+AGG | + | chr3.1:3761375-3761394 | None:intergenic | 25.0% |
| ! | AGTTGACTAATTAAACTGAT+AGG | - | chr3.1:3761642-3761661 | MS.gene78841:intron | 25.0% |
| ! | ATCAGAATTTGCAATATCAA+TGG | - | chr3.1:3762722-3762741 | MS.gene78841:intron | 25.0% |
| ! | ATTGGAATAATACAAACCAT+GGG | - | chr3.1:3762142-3762161 | MS.gene78841:intron | 25.0% |
| ! | CATTCTAATTGTTCATACAT+TGG | - | chr3.1:3762546-3762565 | MS.gene78841:CDS | 25.0% |
| ! | CTATACAAAGTTGACAAAAA+AGG | - | chr3.1:3763904-3763923 | MS.gene78841:intron | 25.0% |
| ! | CTATGATTTCTACTGTAATT+TGG | + | chr3.1:3763433-3763452 | None:intergenic | 25.0% |
| ! | GATTAAATATTCACTTGTGA+AGG | + | chr3.1:3761320-3761339 | None:intergenic | 25.0% |
| ! | GGACATTTAAATATTCAGTA+AGG | - | chr3.1:3764707-3764726 | MS.gene78841:intron | 25.0% |
| ! | GTAAATTGAAGACAACTTAT+GGG | - | chr3.1:3761875-3761894 | MS.gene78841:intron | 25.0% |
| ! | GTTGACTAATTAAACTGATA+GGG | - | chr3.1:3761643-3761662 | MS.gene78841:intron | 25.0% |
| ! | TCAGAATTTGCAATATCAAT+GGG | - | chr3.1:3762723-3762742 | MS.gene78841:intron | 25.0% |
| ! | TGTTCTTTGTTAATAGAAAG+GGG | - | chr3.1:3762262-3762281 | MS.gene78841:intron | 25.0% |
| ! | TTTGGACCAAAATCTTAATT+GGG | - | chr3.1:3760663-3760682 | MS.gene78841:CDS | 25.0% |
| !! | AAAATTTCAAAAGCACAGTA+AGG | + | chr3.1:3762073-3762092 | None:intergenic | 25.0% |
| !! | ACTAAGTTGAAAATACCTTA+TGG | - | chr3.1:3761501-3761520 | MS.gene78841:intron | 25.0% |
| !! | AGTGATTAATATCTTTTGCA+TGG | + | chr3.1:3764110-3764129 | None:intergenic | 25.0% |
| !! | CTTGAAAGGAAATAAACTTT+TGG | + | chr3.1:3763204-3763223 | None:intergenic | 25.0% |
| !! | TTTTGGACCAAAATCTTAAT+TGG | - | chr3.1:3760662-3760681 | MS.gene78841:CDS | 25.0% |
| !!! | ATTGTGATTTGGTTAGAAAA+TGG | - | chr3.1:3762030-3762049 | MS.gene78841:intron | 25.0% |
| !!! | ATTTTAGTATGTATCCATGT+TGG | + | chr3.1:3764014-3764033 | None:intergenic | 25.0% |
| !!! | TTATTTTGCCGTTATAAGAA+TGG | - | chr3.1:3762305-3762324 | MS.gene78841:intron | 25.0% |
| !!! | TTTTTGTTTGTTTCGAAACT+CGG | - | chr3.1:3760961-3760980 | MS.gene78841:intron | 25.0% |
| !!! | TTTTTTGGTTTTAGATGAAG+TGG | - | chr3.1:3761182-3761201 | MS.gene78841:intron | 25.0% |
| !!! | TTTTTTTTGTGGTTTAGATG+GGG | - | chr3.1:3763069-3763088 | MS.gene78841:intron | 25.0% |
| AAAAAGTTTCCAGACTTTGT+GGG | - | chr3.1:3764631-3764650 | MS.gene78841:intron | 30.0% | |
| AACACAAGTGTTATGTTGTA+AGG | - | chr3.1:3761937-3761956 | MS.gene78841:intron | 30.0% | |
| ACATAATTAGTTGGACGATA+CGG | + | chr3.1:3762867-3762886 | None:intergenic | 30.0% | |
| AGAGATAGTTAGGCTAAATA+AGG | + | chr3.1:3763536-3763555 | None:intergenic | 30.0% | |
| AGCATTTCAAGAAGCTTATT+TGG | + | chr3.1:3761968-3761987 | None:intergenic | 30.0% | |
| AGGAAATATATAGGTGACTA+TGG | - | chr3.1:3762596-3762615 | MS.gene78841:CDS | 30.0% | |
| ATATTAAGATTACCGCATGT+TGG | - | chr3.1:3762930-3762949 | MS.gene78841:intron | 30.0% | |
| CATCAGAATCTATAGAGAAA+TGG | - | chr3.1:3762772-3762791 | MS.gene78841:intron | 30.0% | |
| CTTCTGCTAAGGAAATATAT+AGG | - | chr3.1:3762587-3762606 | MS.gene78841:CDS | 30.0% | |
| GAGAGTTCAACATAATTAGT+TGG | + | chr3.1:3762876-3762895 | None:intergenic | 30.0% | |
| GATTGGAATAATACAAACCA+TGG | - | chr3.1:3762141-3762160 | MS.gene78841:intron | 30.0% | |
| GTATTTCCTGCAAATAATTG+TGG | - | chr3.1:3762840-3762859 | MS.gene78841:CDS | 30.0% | |
| GTGAGTTACTAATAGCTTAT+AGG | + | chr3.1:3761849-3761868 | None:intergenic | 30.0% | |
| GTGATTCATATAATCCAACA+TGG | - | chr3.1:3763997-3764016 | MS.gene78841:intron | 30.0% | |
| TAATTAACAGCAACAGAACA+TGG | + | chr3.1:3762514-3762533 | None:intergenic | 30.0% | |
| TACTGCTGAACTTAAATCTT+TGG | - | chr3.1:3760925-3760944 | MS.gene78841:intron | 30.0% | |
| TATATTTCCTTAGCAGAAGA+TGG | + | chr3.1:3762586-3762605 | None:intergenic | 30.0% | |
| TTAAGTGTACTCATCATGAA+GGG | + | chr3.1:3762381-3762400 | None:intergenic | 30.0% | |
| ! | AATATCTTTTGCATGGTTGT+TGG | + | chr3.1:3764103-3764122 | None:intergenic | 30.0% |
| ! | AATTGGGTTTTCCCTTTTTT+TGG | - | chr3.1:3760679-3760698 | MS.gene78841:CDS | 30.0% |
| ! | ACTTTTACATCTTTCATTGC+AGG | + | chr3.1:3764736-3764755 | None:intergenic | 30.0% |
| ! | AGTGTACTTTCAAAGTATCA+AGG | + | chr3.1:3761097-3761116 | None:intergenic | 30.0% |
| ! | ATGAATCACATTTTGAATCC+CGG | + | chr3.1:3763986-3764005 | None:intergenic | 30.0% |
| ! | GCTTGTGTTTGATGATAATA+AGG | - | chr3.1:3760730-3760749 | MS.gene78841:CDS | 30.0% |
| ! | GGAAAACCCAATTAAGATTT+TGG | + | chr3.1:3760672-3760691 | None:intergenic | 30.0% |
| ! | GTGTGTAAGTTTAATTTCAG+TGG | + | chr3.1:3761212-3761231 | None:intergenic | 30.0% |
| ! | TGTGTTTGATGATAATAAGG+TGG | - | chr3.1:3760733-3760752 | MS.gene78841:CDS | 30.0% |
| ! | TTTGATGATAATAAGGTGGT+GGG | - | chr3.1:3760737-3760756 | MS.gene78841:CDS | 30.0% |
| !! | ATGTTCCCCCATTTTATTTA+GGG | + | chr3.1:3764668-3764687 | None:intergenic | 30.0% |
| !! | TCGGTGTTAATATTAGAAGT+TGG | - | chr3.1:3763154-3763173 | MS.gene78841:intron | 30.0% |
| !!! | CTGTCATTTTGTATAGACTT+GGG | + | chr3.1:3763496-3763515 | None:intergenic | 30.0% |
| !!! | GCTTTAGCTCTAGTTTTAAA+TGG | + | chr3.1:3761046-3761065 | None:intergenic | 30.0% |
| !!! | TTTTTTCTTGATTGTAGGGT+AGG | - | chr3.1:3764185-3764204 | MS.gene78841:intron | 30.0% |
| !!! | TTTTTTTCCATCTTCTGCTA+AGG | - | chr3.1:3762576-3762595 | MS.gene78841:CDS | 30.0% |
| AGAAACTACAATGGATGCTT+TGG | - | chr3.1:3762463-3762482 | MS.gene78841:CDS | 35.0% | |
| AGATCTTCTCATTTCTTGGA+TGG | - | chr3.1:3763178-3763197 | MS.gene78841:intron | 35.0% | |
| AGTGTGTGTTGTATCATGAT+AGG | + | chr3.1:3763650-3763669 | None:intergenic | 35.0% | |
| ATATAGGTGACTATGGAAGT+AGG | - | chr3.1:3762603-3762622 | MS.gene78841:CDS | 35.0% | |
| ATCCTTTACATATCTCATGG+CGG | + | chr3.1:3762637-3762656 | None:intergenic | 35.0% | |
| ATTGAGCAGCATGTGTATTT+AGG | + | chr3.1:3763383-3763402 | None:intergenic | 35.0% | |
| CAAAAAGTTTCCAGACTTTG+TGG | - | chr3.1:3764630-3764649 | MS.gene78841:intron | 35.0% | |
| CCAAGTCTATACAAAATGAC+AGG | - | chr3.1:3763494-3763513 | MS.gene78841:intron | 35.0% | |
| CGATTCACGATTCAGAAAAT+AGG | + | chr3.1:3763728-3763747 | None:intergenic | 35.0% | |
| CTATAGAGAAATGGACCAAA+TGG | - | chr3.1:3762781-3762800 | MS.gene78841:intron | 35.0% | |
| CTTAAGTGTACTCATCATGA+AGG | + | chr3.1:3762382-3762401 | None:intergenic | 35.0% | |
| CTTATTCTAAACAGTTGGTC+CGG | - | chr3.1:3762418-3762437 | MS.gene78841:CDS | 35.0% | |
| CTTATTTCCACAAACTCTCT+AGG | + | chr3.1:3761690-3761709 | None:intergenic | 35.0% | |
| GCAGCTACTATATTTCCATT+TGG | + | chr3.1:3762799-3762818 | None:intergenic | 35.0% | |
| GCATATGCAATAGACGAAAT+TGG | - | chr3.1:3764233-3764252 | MS.gene78841:intron | 35.0% | |
| GCTCTTACAGCTTCAATAAA+CGG | + | chr3.1:3760812-3760831 | None:intergenic | 35.0% | |
| GGCTCAGACAAATTAAGAAT+CGG | - | chr3.1:3762326-3762345 | MS.gene78841:CDS | 35.0% | |
| GTCGTTGCCCTAAATAAAAT+GGG | - | chr3.1:3764658-3764677 | MS.gene78841:intron | 35.0% | |
| TAAACTTACACACAACTGTG+AGG | - | chr3.1:3761219-3761238 | MS.gene78841:intron | 35.0% | |
| TAACACTTGTGTTAAGTGCT+TGG | + | chr3.1:3761930-3761949 | None:intergenic | 35.0% | |
| TACAAAATGACAGGATGACT+AGG | - | chr3.1:3763503-3763522 | MS.gene78841:intron | 35.0% | |
| TCGTTGCCCTAAATAAAATG+GGG | - | chr3.1:3764659-3764678 | MS.gene78841:intron | 35.0% | |
| TCTGATGAACTCAAGTTTGT+AGG | + | chr3.1:3762759-3762778 | None:intergenic | 35.0% | |
| TGAGAATGGAGAAACTACAA+TGG | - | chr3.1:3762454-3762473 | MS.gene78841:CDS | 35.0% | |
| TGCATCCTTTACATATCTCA+TGG | + | chr3.1:3762640-3762659 | None:intergenic | 35.0% | |
| TGGAAGATCTTCTCATTTCT+TGG | - | chr3.1:3763174-3763193 | MS.gene78841:intron | 35.0% | |
| TGTCGTTGCCCTAAATAAAA+TGG | - | chr3.1:3764657-3764676 | MS.gene78841:intron | 35.0% | |
| TGTCTGAGCCATTCTTATAA+CGG | + | chr3.1:3762316-3762335 | None:intergenic | 35.0% | |
| TTATTCTAAACAGTTGGTCC+GGG | - | chr3.1:3762419-3762438 | MS.gene78841:CDS | 35.0% | |
| TTTAAATGGCGCCTTACAAA+CGG | + | chr3.1:3761032-3761051 | None:intergenic | 35.0% | |
| ! | CAATTTCAGCTATCAAGTTG+TGG | - | chr3.1:3764546-3764565 | MS.gene78841:intron | 35.0% |
| ! | CACAAAGTCTGGAAACTTTT+TGG | + | chr3.1:3764632-3764651 | None:intergenic | 35.0% |
| ! | CATTTTTCCTGAAATTCGGT+TGG | + | chr3.1:3762821-3762840 | None:intergenic | 35.0% |
| ! | GAAATCATAGAGTATTCGAG+AGG | - | chr3.1:3763443-3763462 | MS.gene78841:intron | 35.0% |
| ! | GTTTGATGATAATAAGGTGG+TGG | - | chr3.1:3760736-3760755 | MS.gene78841:CDS | 35.0% |
| ! | TACTTTGAAAGTACACTCCA+TGG | - | chr3.1:3761100-3761119 | MS.gene78841:intron | 35.0% |
| ! | TTGATGATAATAAGGTGGTG+GGG | - | chr3.1:3760738-3760757 | MS.gene78841:CDS | 35.0% |
| !! | CATGTTCCCCCATTTTATTT+AGG | + | chr3.1:3764669-3764688 | None:intergenic | 35.0% |
| !!! | CCTGTCATTTTGTATAGACT+TGG | + | chr3.1:3763497-3763516 | None:intergenic | 35.0% |
| !!! | GATAGTTTTTTGTGAACCCA+TGG | + | chr3.1:3762161-3762180 | None:intergenic | 35.0% |
| AAGCTATTGCTGTATTGCAG+TGG | - | chr3.1:3761469-3761488 | MS.gene78841:intron | 40.0% | |
| AATAAAATGGGGGAACATGC+TGG | - | chr3.1:3764670-3764689 | MS.gene78841:intron | 40.0% | |
| AATCCCATTGTCCGTTTGTA+AGG | - | chr3.1:3761018-3761037 | MS.gene78841:CDS | 40.0% | |
| ACTGAACACACTTTGCTTGT+AGG | - | chr3.1:3762690-3762709 | MS.gene78841:intron | 40.0% | |
| ACTTGAGAAGTAACCCACTT+GGG | + | chr3.1:3761151-3761170 | None:intergenic | 40.0% | |
| ATAGAGTTTCCGTACTACCA+TGG | + | chr3.1:3764305-3764324 | None:intergenic | 40.0% | |
| CAGCAACAGAACATGGTAAT+TGG | + | chr3.1:3762507-3762526 | None:intergenic | 40.0% | |
| CAGCCACGATACTATATCAA+TGG | - | chr3.1:3762959-3762978 | MS.gene78841:intron | 40.0% | |
| CAGCCATTGATATAGTATCG+TGG | + | chr3.1:3762965-3762984 | None:intergenic | 40.0% | |
| CAGTTCAGAGTCTAAACGAA+AGG | + | chr3.1:3764332-3764351 | None:intergenic | 40.0% | |
| CCGAATTCTTCATAGTGAAC+CGG | - | chr3.1:3763964-3763983 | MS.gene78841:intron | 40.0% | |
| CCGGTTCACTATGAAGAATT+CGG | + | chr3.1:3763967-3763986 | None:intergenic | 40.0% | |
| CGAATTCTTCATAGTGAACC+GGG | - | chr3.1:3763965-3763984 | MS.gene78841:intron | 40.0% | |
| CGTTGCCCTAAATAAAATGG+GGG | - | chr3.1:3764660-3764679 | MS.gene78841:intron | 40.0% | |
| CTGTTGGCACATCAACAAAT+GGG | - | chr3.1:3763099-3763118 | MS.gene78841:intron | 40.0% | |
| GGAATTGGAACAGTATCCAT+TGG | - | chr3.1:3760772-3760791 | MS.gene78841:intron | 40.0% | |
| GGGTCTGTTAAGAGATAGTT+AGG | + | chr3.1:3763546-3763565 | None:intergenic | 40.0% | |
| GTAGTTTCTCCATTCTCATC+TGG | + | chr3.1:3762452-3762471 | None:intergenic | 40.0% | |
| GTATCCTATCAATGAGACGA+CGG | - | chr3.1:3764057-3764076 | MS.gene78841:intron | 40.0% | |
| TACAAGAAAAACGCTACTCG+AGG | + | chr3.1:3764458-3764477 | None:intergenic | 40.0% | |
| TACAATGGATGCTTTGGTCA+TGG | - | chr3.1:3762469-3762488 | MS.gene78841:CDS | 40.0% | |
| TACGGACCACAATTATTTGC+AGG | + | chr3.1:3762849-3762868 | None:intergenic | 40.0% | |
| TGTTGGCACATCAACAAATG+GGG | - | chr3.1:3763100-3763119 | MS.gene78841:intron | 40.0% | |
| TTACAAACGGACAATGGGAT+TGG | + | chr3.1:3761019-3761038 | None:intergenic | 40.0% | |
| TTCGTCTATTGCATATGCTG+AGG | + | chr3.1:3764231-3764250 | None:intergenic | 40.0% | |
| TTTAAATGTCCAACCATGGC+AGG | + | chr3.1:3764698-3764717 | None:intergenic | 40.0% | |
| ! | ATCAAGTTGTGGAAAGCATG+AGG | - | chr3.1:3764557-3764576 | MS.gene78841:intron | 40.0% |
| ! | GCATCCTTAGCAGCAATTTT+GGG | + | chr3.1:3764595-3764614 | None:intergenic | 40.0% |
| ! | TGCATCCTTAGCAGCAATTT+TGG | + | chr3.1:3764596-3764615 | None:intergenic | 40.0% |
| ! | TGTATAGACTTGGGACCTTT+TGG | + | chr3.1:3763487-3763506 | None:intergenic | 40.0% |
| ! | TGTCGAGTGCTTGATTTGAT+TGG | - | chr3.1:3762124-3762143 | MS.gene78841:intron | 40.0% |
| AAAGCCGTCGTCTCATTGAT+AGG | + | chr3.1:3764064-3764083 | None:intergenic | 45.0% | |
| AGCAGAGATGAGAGCTAACA+TGG | + | chr3.1:3763310-3763329 | None:intergenic | 45.0% | |
| AGCTTGGCTACACGTTTGTT+AGG | + | chr3.1:3764410-3764429 | None:intergenic | 45.0% | |
| AGGATGCAATCAAAGCTGCT+AGG | - | chr3.1:3762652-3762671 | MS.gene78841:CDS | 45.0% | |
| ATATGCTGAGGATCCAGCTA+TGG | + | chr3.1:3764219-3764238 | None:intergenic | 45.0% | |
| ATCTCTGCTGTACTCGAGAT+AGG | - | chr3.1:3763321-3763340 | MS.gene78841:intron | 45.0% | |
| ATGGATGCTTTGGTCATGGA+TGG | - | chr3.1:3762473-3762492 | MS.gene78841:CDS | 45.0% | |
| CAACATTCAAGATTCCTGGC+AGG | - | chr3.1:3763123-3763142 | MS.gene78841:intron | 45.0% | |
| CAAGAACCAACTAATCCGAG+AGG | - | chr3.1:3760992-3761011 | MS.gene78841:intron | 45.0% | |
| CACTTGAGAAGTAACCCACT+TGG | + | chr3.1:3761152-3761171 | None:intergenic | 45.0% | |
| CGCTTTCTTCCATGGTAGTA+CGG | - | chr3.1:3764293-3764312 | MS.gene78841:intron | 45.0% | |
| CTTGATTGTAGGGTAGGTGA+TGG | - | chr3.1:3764191-3764210 | MS.gene78841:intron | 45.0% | |
| GAACGATCCTAGAGAGTTTG+TGG | - | chr3.1:3761680-3761699 | MS.gene78841:intron | 45.0% | |
| GAACTCAAGTTTGTAGGTCC+TGG | + | chr3.1:3762753-3762772 | None:intergenic | 45.0% | |
| GACGTCTGACCTTGCAATTT+CGG | - | chr3.1:3761265-3761284 | MS.gene78841:intron | 45.0% | |
| GCAATATCAATGGGTCTTCC+AGG | - | chr3.1:3762732-3762751 | MS.gene78841:intron | 45.0% | |
| GCTGTTGGCACATCAACAAA+TGG | - | chr3.1:3763098-3763117 | MS.gene78841:intron | 45.0% | |
| GGAACCCAAAATTGCTGCTA+AGG | - | chr3.1:3764588-3764607 | MS.gene78841:intron | 45.0% | |
| GTACCAGAGAGAGTAAAGAG+AGG | + | chr3.1:3760578-3760597 | None:intergenic | 45.0% | |
| TAGACTCTCCCAATGCCAAA+AGG | - | chr3.1:3763469-3763488 | MS.gene78841:intron | 45.0% | |
| TATGCTGAGGATCCAGCTAT+GGG | + | chr3.1:3764218-3764237 | None:intergenic | 45.0% | |
| TCATGATGCGCTTTCTTCCA+TGG | - | chr3.1:3764285-3764304 | MS.gene78841:intron | 45.0% | |
| TCGAGGTTGAAACTACCAAC+AGG | + | chr3.1:3764441-3764460 | None:intergenic | 45.0% | |
| TGCCGCCATGAGATATGTAA+AGG | - | chr3.1:3762632-3762651 | MS.gene78841:CDS | 45.0% | |
| TGGATGCTTTGGTCATGGAT+GGG | - | chr3.1:3762474-3762493 | MS.gene78841:CDS | 45.0% | |
| TGGCAAATGCCGAAATTGCA+AGG | + | chr3.1:3761277-3761296 | None:intergenic | 45.0% | |
| TTCCTGGCAGGTAATCTTGT+CGG | - | chr3.1:3763135-3763154 | MS.gene78841:intron | 45.0% | |
| TTGAAGCTGTAAGAGCTGCA+TGG | - | chr3.1:3760816-3760835 | MS.gene78841:intron | 45.0% | |
| ! | ACTTGGGACCTTTTGGCATT+GGG | + | chr3.1:3763480-3763499 | None:intergenic | 45.0% |
| ! | AGTTGTGGAAAGCATGAGGT+TGG | - | chr3.1:3764561-3764580 | MS.gene78841:intron | 45.0% |
| ! | ATCCATTGGTTGTGAGCACA+TGG | - | chr3.1:3760786-3760805 | MS.gene78841:intron | 45.0% |
| ! | GTTGTGGAAAGCATGAGGTT+GGG | - | chr3.1:3764562-3764581 | MS.gene78841:intron | 45.0% |
| !! | ATTGGACCTCTCGGATTAGT+TGG | + | chr3.1:3761001-3761020 | None:intergenic | 45.0% |
| !! | CTCTCGGATTAGTTGGTTCT+TGG | + | chr3.1:3760994-3761013 | None:intergenic | 45.0% |
| !! | TGGCTTGGTGTTATTGGCTA+GGG | + | chr3.1:3761127-3761146 | None:intergenic | 45.0% |
| AGCAAAGCTCTACGCACTAG+TGG | - | chr3.1:3761063-3761082 | MS.gene78841:CDS | 50.0% | |
| ATCACACCCAAGTTGCTCAC+AGG | + | chr3.1:3760897-3760916 | None:intergenic | 50.0% | |
| ATTGGCGCATGTTGTGCAAC+TGG | - | chr3.1:3764251-3764270 | MS.gene78841:intron | 50.0% | |
| CCAACAGGCTACTTGTAGCT+TGG | + | chr3.1:3764426-3764445 | None:intergenic | 50.0% | |
| CCAAGCTACAAGTAGCCTGT+TGG | - | chr3.1:3764423-3764442 | MS.gene78841:CDS | 50.0% | |
| CCACCTCTCTTTACTCTCTC+TGG | - | chr3.1:3760572-3760591 | MS.gene78841:CDS | 50.0% | |
| CCAGAGAGAGTAAAGAGAGG+TGG | + | chr3.1:3760575-3760594 | None:intergenic | 50.0% | |
| CTCTACGCACTAGTGGGATT+TGG | - | chr3.1:3761070-3761089 | MS.gene78841:CDS | 50.0% | |
| CTGCTGTACTCGAGATAGGA+TGG | - | chr3.1:3763325-3763344 | MS.gene78841:intron | 50.0% | |
| GACAATGGGATTGGACCTCT+CGG | + | chr3.1:3761010-3761029 | None:intergenic | 50.0% | |
| GCAAAGCTCTACGCACTAGT+GGG | - | chr3.1:3761064-3761083 | MS.gene78841:CDS | 50.0% | |
| GCGCCTTACAAACGGACAAT+GGG | + | chr3.1:3761024-3761043 | None:intergenic | 50.0% | |
| GCTGTTGATGCCGTTGTTGA+AGG | - | chr3.1:3760863-3760882 | MS.gene78841:intron | 50.0% | |
| GGATGCTTTGGTCATGGATG+GGG | - | chr3.1:3762475-3762494 | MS.gene78841:CDS | 50.0% | |
| GGGGCAACATTCAAGATTCC+TGG | - | chr3.1:3763119-3763138 | MS.gene78841:intron | 50.0% | |
| GGTGGAGCAACCTTCAACAA+CGG | + | chr3.1:3760876-3760895 | None:intergenic | 50.0% | |
| GTAGCTGCCAACCGAATTTC+AGG | - | chr3.1:3762811-3762830 | MS.gene78841:intron | 50.0% | |
| TACACACAACTGTGAGGTCC+CGG | - | chr3.1:3761225-3761244 | MS.gene78841:intron | 50.0% | |
| TAGATGGGGCACATTGCTGT+TGG | - | chr3.1:3763083-3763102 | MS.gene78841:intron | 50.0% | |
| TCTAAACAGTTGGTCCGGGT+GGG | - | chr3.1:3762423-3762442 | MS.gene78841:CDS | 50.0% | |
| TCTAGAAGTCCTAGCTCAGC+TGG | + | chr3.1:3761297-3761316 | None:intergenic | 50.0% | |
| TGGCTGTGAAGACCAACATG+CGG | + | chr3.1:3762945-3762964 | None:intergenic | 50.0% | |
| TGTGAGCAACTTGGGTGTGA+TGG | - | chr3.1:3760896-3760915 | MS.gene78841:intron | 50.0% | |
| TTCTAAACAGTTGGTCCGGG+TGG | - | chr3.1:3762422-3762441 | MS.gene78841:CDS | 50.0% | |
| TTGGCGCATGTTGTGCAACT+GGG | - | chr3.1:3764252-3764271 | MS.gene78841:intron | 50.0% | |
| ! | CAACTTGGGTGTGATGGAAC+AGG | - | chr3.1:3760902-3760921 | MS.gene78841:intron | 50.0% |
| ! | GACTTGGGACCTTTTGGCAT+TGG | + | chr3.1:3763481-3763500 | None:intergenic | 50.0% |
| ! | GGAAAGCATGAGGTTGGGAA+TGG | - | chr3.1:3764567-3764586 | MS.gene78841:intron | 50.0% |
| ! | GTGTTATTGGCTAGGGACCA+TGG | + | chr3.1:3761120-3761139 | None:intergenic | 50.0% |
| !! | CTGGCTTGGTGTTATTGGCT+AGG | + | chr3.1:3761128-3761147 | None:intergenic | 50.0% |
| !! | TTGGGCTGGCTTGGTGTTAT+TGG | + | chr3.1:3761133-3761152 | None:intergenic | 50.0% |
| AACACCAAGCCAGCCCAAGT+GGG | - | chr3.1:3761135-3761154 | MS.gene78841:intron | 55.0% | |
| ACACACAACTGTGAGGTCCC+GGG | - | chr3.1:3761226-3761245 | MS.gene78841:intron | 55.0% | |
| ACACCCAAGTTGCTCACAGG+TGG | + | chr3.1:3760894-3760913 | None:intergenic | 55.0% | |
| ACGACAGCTCCCACAAAGTC+TGG | + | chr3.1:3764643-3764662 | None:intergenic | 55.0% | |
| CAAGGTCAGACGTCATGACC+CGG | + | chr3.1:3761259-3761278 | None:intergenic | 55.0% | |
| CACCGACAAGATTACCTGCC+AGG | + | chr3.1:3763140-3763159 | None:intergenic | 55.0% | |
| GAGAAGTAACCCACTTGGGC+TGG | + | chr3.1:3761147-3761166 | None:intergenic | 55.0% | |
| GCATGGAGAGCTGTTGATGC+TGG | - | chr3.1:3760833-3760852 | MS.gene78841:intron | 55.0% | |
| GCATGTTGTGCAACTGGGGA+TGG | - | chr3.1:3764257-3764276 | MS.gene78841:intron | 55.0% | |
| GCTCCACCTGTGAGCAACTT+GGG | - | chr3.1:3760888-3760907 | MS.gene78841:intron | 55.0% | |
| GGCCATGTGCTCACAACCAA+TGG | + | chr3.1:3760791-3760810 | None:intergenic | 55.0% | |
| GGCGCCTTACAAACGGACAA+TGG | + | chr3.1:3761025-3761044 | None:intergenic | 55.0% | |
| GGGGCATGAACGTGTGGAAT+TGG | - | chr3.1:3760757-3760776 | MS.gene78841:intron | 55.0% | |
| GGTGGGAGTCCAGATGAGAA+TGG | - | chr3.1:3762440-3762459 | MS.gene78841:CDS | 55.0% | |
| TAACACCAAGCCAGCCCAAG+TGG | - | chr3.1:3761134-3761153 | MS.gene78841:intron | 55.0% | |
| TCATGACCCGGTTTCGAACC+CGG | + | chr3.1:3761247-3761266 | None:intergenic | 55.0% | |
| TGCTCCACCTGTGAGCAACT+TGG | - | chr3.1:3760887-3760906 | MS.gene78841:intron | 55.0% | |
| TGGCGCATGTTGTGCAACTG+GGG | - | chr3.1:3764253-3764272 | MS.gene78841:intron | 55.0% | |
| TTCTCATCTGGACTCCCACC+CGG | + | chr3.1:3762440-3762459 | None:intergenic | 55.0% | |
| ! | GTAGGTGATGGTCCCATAGC+TGG | - | chr3.1:3764203-3764222 | MS.gene78841:intron | 55.0% |
| ATGCTGGTGCCTGCCATGGT+TGG | - | chr3.1:3764686-3764705 | MS.gene78841:intron | 60.0% | |
| CATGACCCGGTTTCGAACCC+GGG | + | chr3.1:3761246-3761265 | None:intergenic | 60.0% | |
| CGGCATTTGCCAGCTGAGCT+AGG | - | chr3.1:3761285-3761304 | MS.gene78841:intron | 60.0% | |
| GAACATGCTGGTGCCTGCCA+TGG | - | chr3.1:3764682-3764701 | MS.gene78841:intron | 60.0% | |
| TGAGGTCCCGGGTTCGAAAC+CGG | - | chr3.1:3761237-3761256 | MS.gene78841:intron | 60.0% | |
| !! | GTAACCCACTTGGGCTGGCT+TGG | + | chr3.1:3761142-3761161 | None:intergenic | 60.0% |
| GAGGTCCCGGGTTCGAAACC+GGG | - | chr3.1:3761238-3761257 | MS.gene78841:intron | 65.0% | |
| !! | GGTGGTGGGGCATGAACGTG+TGG | - | chr3.1:3760751-3760770 | MS.gene78841:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 3760540 | 3764774 | 3760540 | ID=MS.gene78841 |
| chr3.1 | mRNA | 3760540 | 3764774 | 3760540 | ID=MS.gene78841.t1;Parent=MS.gene78841 |
| chr3.1 | exon | 3764721 | 3764774 | 3764721 | ID=MS.gene78841.t1.exon1;Parent=MS.gene78841.t1 |
| chr3.1 | CDS | 3764721 | 3764774 | 3764721 | ID=cds.MS.gene78841.t1;Parent=MS.gene78841.t1 |
| chr3.1 | exon | 3764391 | 3764562 | 3764391 | ID=MS.gene78841.t1.exon2;Parent=MS.gene78841.t1 |
| chr3.1 | CDS | 3764391 | 3764562 | 3764391 | ID=cds.MS.gene78841.t1;Parent=MS.gene78841.t1 |
| chr3.1 | exon | 3762818 | 3762882 | 3762818 | ID=MS.gene78841.t1.exon3;Parent=MS.gene78841.t1 |
| chr3.1 | CDS | 3762818 | 3762882 | 3762818 | ID=cds.MS.gene78841.t1;Parent=MS.gene78841.t1 |
| chr3.1 | exon | 3762319 | 3762705 | 3762319 | ID=MS.gene78841.t1.exon4;Parent=MS.gene78841.t1 |
| chr3.1 | CDS | 3762319 | 3762705 | 3762319 | ID=cds.MS.gene78841.t1;Parent=MS.gene78841.t1 |
| chr3.1 | exon | 3762170 | 3762228 | 3762170 | ID=MS.gene78841.t1.exon5;Parent=MS.gene78841.t1 |
| chr3.1 | CDS | 3762170 | 3762228 | 3762170 | ID=cds.MS.gene78841.t1;Parent=MS.gene78841.t1 |
| chr3.1 | exon | 3761008 | 3761112 | 3761008 | ID=MS.gene78841.t1.exon6;Parent=MS.gene78841.t1 |
| chr3.1 | CDS | 3761008 | 3761112 | 3761008 | ID=cds.MS.gene78841.t1;Parent=MS.gene78841.t1 |
| chr3.1 | exon | 3760540 | 3760759 | 3760540 | ID=MS.gene78841.t1.exon7;Parent=MS.gene78841.t1 |
| chr3.1 | CDS | 3760540 | 3760759 | 3760540 | ID=cds.MS.gene78841.t1;Parent=MS.gene78841.t1 |
| Gene Sequence |
| Protein sequence |
