Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78860.t1 | XP_003598144.1 | 94.5 | 603 | 16 | 1 | 1 | 603 | 1 | 586 | 0.00E+00 | 1121.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78860.t1 | Q8VYC8 | 65.0 | 603 | 183 | 5 | 1 | 603 | 1 | 575 | 4.4e-221 | 768.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78860.t1 | G7IVC2 | 94.5 | 603 | 16 | 1 | 1 | 603 | 1 | 586 | 0.0e+00 | 1121.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene78860 | MS.gene009402 | PPI |
| MS.gene78860 | MS.gene058358 | PPI |
| MS.gene56195 | MS.gene78860 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78860.t1 | MTR_3g007760 | 94.527 | 603 | 16 | 1 | 1 | 603 | 1 | 586 | 0.0 | 1161 |
| MS.gene78860.t1 | MTR_3g007760 | 94.286 | 525 | 13 | 1 | 79 | 603 | 56 | 563 | 0.0 | 1014 |
| MS.gene78860.t1 | MTR_5g007710 | 27.855 | 359 | 199 | 11 | 57 | 397 | 29 | 345 | 2.60e-29 | 122 |
| MS.gene78860.t1 | MTR_5g007710 | 27.855 | 359 | 199 | 11 | 57 | 397 | 29 | 345 | 6.28e-29 | 120 |
| MS.gene78860.t1 | MTR_4g077800 | 26.904 | 394 | 219 | 12 | 57 | 422 | 29 | 381 | 9.84e-25 | 108 |
| MS.gene78860.t1 | MTR_4g077800 | 26.463 | 393 | 222 | 12 | 57 | 422 | 29 | 381 | 1.97e-24 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78860.t1 | AT4G25230 | 65.008 | 603 | 183 | 5 | 1 | 603 | 1 | 575 | 0.0 | 806 |
| MS.gene78860.t1 | AT4G25230 | 65.008 | 603 | 183 | 5 | 1 | 603 | 1 | 575 | 0.0 | 806 |
| MS.gene78860.t1 | AT4G25230 | 65.008 | 603 | 183 | 5 | 1 | 603 | 1 | 575 | 0.0 | 806 |
| MS.gene78860.t1 | AT5G51450 | 63.682 | 603 | 190 | 6 | 1 | 603 | 1 | 574 | 0.0 | 758 |
| MS.gene78860.t1 | AT5G51450 | 62.158 | 621 | 188 | 7 | 1 | 603 | 1 | 592 | 0.0 | 747 |
| MS.gene78860.t1 | AT1G65040 | 26.667 | 360 | 202 | 11 | 57 | 397 | 29 | 345 | 1.64e-28 | 119 |
| MS.gene78860.t1 | AT1G65040 | 29.545 | 264 | 143 | 8 | 140 | 397 | 48 | 274 | 6.34e-27 | 113 |
| MS.gene78860.t1 | AT3G16090 | 28.205 | 351 | 185 | 11 | 63 | 397 | 46 | 345 | 7.75e-27 | 114 |
| MS.gene78860.t1 | AT1G65040 | 25.348 | 359 | 185 | 11 | 57 | 397 | 29 | 322 | 7.21e-23 | 102 |
| MS.gene78860.t1 | AT1G65040 | 27.757 | 263 | 126 | 8 | 140 | 397 | 1 | 204 | 4.14e-21 | 95.1 |
| MS.gene78860.t1 | AT1G65040 | 35.976 | 164 | 83 | 6 | 239 | 397 | 20 | 166 | 1.93e-20 | 92.4 |
| MS.gene78860.t1 | AT1G65040 | 35.976 | 164 | 83 | 6 | 239 | 397 | 46 | 192 | 4.68e-20 | 90.9 |
Find 145 sgRNAs with CRISPR-Local
Find 434 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCAGGTTGGTTGCATTCT+TGG | 0.164820 | 3.1:+3540471 | MS.gene78860:CDS |
| TATAACTGTAGGTTCTTTAT+TGG | 0.205185 | 3.1:+3539214 | MS.gene78860:intron |
| CAACCTTTGATGATGCTTCT+TGG | 0.213908 | 3.1:+3540609 | MS.gene78860:CDS |
| CTTAAATCAGATGGACTAAT+TGG | 0.254906 | 3.1:+3536322 | MS.gene78860:CDS |
| GGCCGTACTTTGTTCTTTAA+AGG | 0.264896 | 3.1:+3538151 | MS.gene78860:CDS |
| CACTTTATCAAGCAGGTCTT+TGG | 0.274479 | 3.1:+3538117 | MS.gene78860:CDS |
| GTTGCATTCTTGGCCAAATC+AGG | 0.276468 | 3.1:+3540481 | MS.gene78860:CDS |
| TGTGAAGTTTATAGCAATTT+CGG | 0.299921 | 3.1:+3536237 | MS.gene78860:CDS |
| ATGATGCTTCTTGGAACCTT+TGG | 0.301147 | 3.1:+3540618 | MS.gene78860:CDS |
| ATATGAATTGCAGGCCATTT+TGG | 0.312923 | 3.1:+3538776 | MS.gene78860:intron |
| GCAATGATAAACCGCATAAA+AGG | 0.319003 | 3.1:+3539499 | MS.gene78860:CDS |
| TGCATAGATGTTTCAAGCTC+TGG | 0.346925 | 3.1:+3538274 | MS.gene78860:intron |
| GATTTCAGTTACTTGACATA+TGG | 0.351948 | 3.1:+3538805 | MS.gene78860:CDS |
| TTGGTCATTACTTGTATATA+TGG | 0.354551 | 3.1:+3539303 | MS.gene78860:CDS |
| AGCAATTTCGGCGGTTTCTA+CGG | 0.359887 | 3.1:+3536249 | MS.gene78860:CDS |
| TGGCCAAATCAGGGTGTTGA+TGG | 0.364216 | 3.1:+3540491 | MS.gene78860:CDS |
| CCATGACATTGAGTTACCTT+TGG | 0.374744 | 3.1:+3536375 | MS.gene78860:CDS |
| GAAGCCTGAGAAGGATTAAT+AGG | 0.380643 | 3.1:-3540641 | None:intergenic |
| GAAATGGTGGTTTACATATA+AGG | 0.383514 | 3.1:+3540720 | MS.gene78860:CDS |
| GCTCCATCAACACCCTGATT+TGG | 0.384253 | 3.1:-3540494 | None:intergenic |
| TTGCTATGGCTGAGACTGTT+CGG | 0.384425 | 3.1:+3540783 | MS.gene78860:CDS |
| TATCAAGCAGTTTAGTTGTT+CGG | 0.384919 | 3.1:-3538860 | None:intergenic |
| TTGTATATATGGCGGCTTCA+TGG | 0.385653 | 3.1:+3539314 | MS.gene78860:CDS |
| CTGAAATCCATGCACCAAAA+TGG | 0.388541 | 3.1:-3538790 | None:intergenic |
| TTGGCCTATTAATCCTTCTC+AGG | 0.395938 | 3.1:+3540637 | MS.gene78860:CDS |
| TGACATATGGATTCATCATT+CGG | 0.402304 | 3.1:+3538818 | MS.gene78860:CDS |
| TAAAAGGCTTTATTAGACTA+AGG | 0.420440 | 3.1:+3539515 | MS.gene78860:CDS |
| TCCCCTGGTGTAAGACTGCC+AGG | 0.420980 | 3.1:+3540695 | MS.gene78860:CDS |
| TGCTATGGCTGAGACTGTTC+GGG | 0.421473 | 3.1:+3540784 | MS.gene78860:CDS |
| CATGACATTGAGTTACCTTT+GGG | 0.425509 | 3.1:+3536376 | MS.gene78860:CDS |
| GCATTGTTGAGTGTCTGATT+TGG | 0.427555 | 3.1:-3540060 | None:intergenic |
| CGTTAATTATGTCATTTACA+AGG | 0.430759 | 3.1:+3537277 | MS.gene78860:CDS |
| GGAGGTTCTACCTCATATTC+CGG | 0.432309 | 3.1:+3540805 | MS.gene78860:CDS |
| GATCAAATCCTGCACTCATT+TGG | 0.433774 | 3.1:-3539996 | None:intergenic |
| TCCGGACGACATAATATTCC+AGG | 0.436173 | 3.1:+3540823 | MS.gene78860:CDS |
| CTTATCTAGGAGCGCAGGAC+TGG | 0.436821 | 3.1:+3540448 | MS.gene78860:intron |
| AAGGCTCAAAGAAAAGTAAC+AGG | 0.437902 | 3.1:-3538649 | None:intergenic |
| GAAGGAGCGGTCGCCTGACT+TGG | 0.439287 | 3.1:-3540674 | None:intergenic |
| GGGAATACTTATCCGGAACT+TGG | 0.439914 | 3.1:+3539244 | MS.gene78860:CDS |
| ATAAATTTATTGAAGAATCA+AGG | 0.457654 | 3.1:+3542276 | MS.gene78860:intron |
| TTGGGTTTGTATACCACCAT+AGG | 0.461103 | 3.1:+3536394 | MS.gene78860:CDS |
| ACCTGGAATATTATGTCGTC+CGG | 0.467248 | 3.1:-3540824 | None:intergenic |
| AATCAGATGGACTAATTGGC+TGG | 0.468773 | 3.1:+3536326 | MS.gene78860:CDS |
| AGCTCTTCAGTGGTTGCATC+GGG | 0.469132 | 3.1:-3539568 | None:intergenic |
| CAGGCGACCGCTCCTTCCCC+TGG | 0.474014 | 3.1:+3540680 | MS.gene78860:CDS |
| AAGCAGGTCTTTGGTCAACT+TGG | 0.476603 | 3.1:+3538126 | MS.gene78860:CDS |
| CTGTAGGTTCTTTATTGGAA+TGG | 0.478929 | 3.1:+3539219 | MS.gene78860:intron |
| CTTAGAGCTACAATTGTCCT+TGG | 0.480097 | 3.1:+3542300 | MS.gene78860:CDS |
| TTCCACGAGTGGTCCAAGTC+AGG | 0.485221 | 3.1:+3540661 | MS.gene78860:CDS |
| TGGCTGGAATTCAATTCACT+TGG | 0.487314 | 3.1:+3536342 | MS.gene78860:CDS |
| AATGAAACAAACTCTAGTAC+AGG | 0.490198 | 3.1:+3539943 | MS.gene78860:CDS |
| AGCTCTGGCTAGGGATCGAT+TGG | 0.491188 | 3.1:+3538289 | MS.gene78860:CDS |
| GTAAGACTGCCAGGAGGAAA+TGG | 0.491286 | 3.1:+3540704 | MS.gene78860:CDS |
| AATGGAAGGGAATACTTATC+CGG | 0.492575 | 3.1:+3539237 | MS.gene78860:CDS |
| TACATATAAGGACCGCTTCA+CGG | 0.493498 | 3.1:+3540732 | MS.gene78860:CDS |
| TAGCTCTTCAGTGGTTGCAT+CGG | 0.493549 | 3.1:-3539569 | None:intergenic |
| ACAATGCCGAAGGTGTTCCT+TGG | 0.494423 | 3.1:+3540076 | MS.gene78860:CDS |
| TTAGAGAAACTTAAATCAGA+TGG | 0.495185 | 3.1:+3536313 | MS.gene78860:CDS |
| AGATGTTTCAAGCTCTGGCT+AGG | 0.496432 | 3.1:+3538279 | MS.gene78860:intron |
| TTACCTCCAAGGAACACCTT+CGG | 0.500316 | 3.1:-3540082 | None:intergenic |
| ATCTTGCGTGTTTGAGATCG+TGG | 0.507271 | 3.1:+3539761 | MS.gene78860:CDS |
| TTGCTCATGACAGGAACCTA+TGG | 0.511103 | 3.1:+3539702 | MS.gene78860:intron |
| TATGTCCAGGGTGTGGCAGA+TGG | 0.511444 | 3.1:-3538329 | None:intergenic |
| ATTATGTCGTCCGGAATATG+AGG | 0.511917 | 3.1:-3540815 | None:intergenic |
| CGCCTGACTTGGACCACTCG+TGG | 0.513131 | 3.1:-3540663 | None:intergenic |
| ATCAGTTTACGAGTTTCAGA+AGG | 0.516795 | 3.1:-3537245 | None:intergenic |
| AGGTTCTTTATTGGAATGGA+AGG | 0.516889 | 3.1:+3539223 | MS.gene78860:intron |
| GTCATTACTTGTATATATGG+CGG | 0.518434 | 3.1:+3539306 | MS.gene78860:CDS |
| AAAAGTGGCTTTCGGCATGT+TGG | 0.520638 | 3.1:-3539904 | None:intergenic |
| TTGCATTCTTGGCCAAATCA+GGG | 0.524173 | 3.1:+3540482 | MS.gene78860:CDS |
| GACAAGTATACATCTCAGTC+AGG | 0.526090 | 3.1:-3539882 | None:intergenic |
| TATTGCTTTCGAGACACTGC+AGG | 0.527283 | 3.1:+3538676 | MS.gene78860:CDS |
| CCTCCTGGCAGTCTTACACC+AGG | 0.530606 | 3.1:-3540698 | None:intergenic |
| TACCTTTAAAGAACAAAGTA+CGG | 0.531458 | 3.1:-3538153 | None:intergenic |
| ATGCCGAAGGTGTTCCTTGG+AGG | 0.534288 | 3.1:+3540079 | MS.gene78860:CDS |
| GGAATACTTATCCGGAACTT+GGG | 0.534492 | 3.1:+3539245 | MS.gene78860:CDS |
| ACGATCTCAAACACGCAAGA+TGG | 0.539779 | 3.1:-3539759 | None:intergenic |
| AGGTCTTTGGTCAACTTGGT+TGG | 0.540663 | 3.1:+3538130 | MS.gene78860:CDS |
| GCTATCAGAACAGTAGGTCT+CGG | 0.542828 | 3.1:+3540530 | MS.gene78860:CDS |
| TGGGTTTGTATACCACCATA+GGG | 0.545778 | 3.1:+3536395 | MS.gene78860:CDS |
| TTTAGCAAATGTGCTTGCTA+TGG | 0.545866 | 3.1:+3540769 | MS.gene78860:CDS |
| CCTTCTTAATCTTAGTCTCA+AGG | 0.549610 | 3.1:+3536450 | MS.gene78860:CDS |
| TATATGGCGGCTTCATGGCA+TGG | 0.551008 | 3.1:+3539319 | MS.gene78860:CDS |
| ATATACACGAAGATATGTCC+AGG | 0.553719 | 3.1:-3538342 | None:intergenic |
| ATTAGACTAAGGATAGCTCT+AGG | 0.556983 | 3.1:+3539526 | MS.gene78860:CDS |
| TGATTTGGAAACAATCCTGC+AGG | 0.557471 | 3.1:-3540045 | None:intergenic |
| ACAATTCGTCAATAACCCTA+TGG | 0.557624 | 3.1:-3536410 | None:intergenic |
| AGTGTTGGTGGCACAATCAG+TGG | 0.557838 | 3.1:-3538098 | None:intergenic |
| AATTGTCCTTGGAGAGGCAT+AGG | 0.558188 | 3.1:+3542311 | MS.gene78860:CDS |
| CTTGAAATATATAGCACACA+TGG | 0.558537 | 3.1:+3538614 | MS.gene78860:CDS |
| CCTTGAGACTAAGATTAAGA+AGG | 0.563725 | 3.1:-3536450 | None:intergenic |
| ATGAGACATCTTGCATCTGT+CGG | 0.563921 | 3.1:+3540569 | MS.gene78860:CDS |
| GATGTTTCAAGCTCTGGCTA+GGG | 0.566849 | 3.1:+3538280 | MS.gene78860:intron |
| GGTTCTTTATTGGAATGGAA+GGG | 0.567480 | 3.1:+3539224 | MS.gene78860:intron |
| AATCAGGGTGTTGATGGAGC+TGG | 0.572135 | 3.1:+3540497 | MS.gene78860:CDS |
| CTTGCACGCCAAATGAGTGC+AGG | 0.573022 | 3.1:+3539988 | MS.gene78860:CDS |
| ATAGCACTGCATCTACAAGA+TGG | 0.573918 | 3.1:-3539346 | None:intergenic |
| CCTTCTCAGGCTTCCACGAG+TGG | 0.574591 | 3.1:+3540650 | MS.gene78860:CDS |
| ATGACAGGAACCTATGGCTA+AGG | 0.574757 | 3.1:+3539708 | MS.gene78860:intron |
| TCAAACACGCAAGATGGAAG+AGG | 0.575860 | 3.1:-3539753 | None:intergenic |
| GAAAAGTAACAGGAACATAG+AGG | 0.580540 | 3.1:-3538639 | None:intergenic |
| CCACCAACACTTTATCAAGC+AGG | 0.580628 | 3.1:+3538110 | MS.gene78860:CDS |
| TGTAAACCACCATTTCCTCC+TGG | 0.580699 | 3.1:-3540713 | None:intergenic |
| AGGAGCGCAGGACTGGACTC+AGG | 0.581791 | 3.1:+3540455 | MS.gene78860:intron |
| CATCTCCATCTGCCACACCC+TGG | 0.582406 | 3.1:+3538324 | MS.gene78860:CDS |
| ATCAAAGGTTGTCTGAGCAT+AGG | 0.588207 | 3.1:-3540597 | None:intergenic |
| ATCATTTGCAGACCGTGAAG+CGG | 0.588608 | 3.1:-3540744 | None:intergenic |
| CTCCTGGCAGTCTTACACCA+GGG | 0.590246 | 3.1:-3540697 | None:intergenic |
| GTCTCGAAAGCAATACTCAA+AGG | 0.593508 | 3.1:-3538668 | None:intergenic |
| CCTGCTTGATAAAGTGTTGG+TGG | 0.595637 | 3.1:-3538110 | None:intergenic |
| GCTAGACATAACATGCCTGC+AGG | 0.596143 | 3.1:+3540030 | MS.gene78860:CDS |
| GGCAGTCTTACACCAGGGGA+AGG | 0.597521 | 3.1:-3540692 | None:intergenic |
| AGCTACAATTGTCCTTGGAG+AGG | 0.597540 | 3.1:+3542305 | MS.gene78860:CDS |
| CCACTCGTGGAAGCCTGAGA+AGG | 0.599720 | 3.1:-3540650 | None:intergenic |
| AGGATTTGATCGTCAAAACT+CGG | 0.601145 | 3.1:+3540008 | MS.gene78860:CDS |
| ATATCCTCGTAGCTCTTCAG+TGG | 0.607178 | 3.1:-3539578 | None:intergenic |
| ATGAAACAAACTCTAGTACA+GGG | 0.610423 | 3.1:+3539944 | MS.gene78860:CDS |
| GCGCAGGACTGGACTCAGGT+TGG | 0.610826 | 3.1:+3540459 | MS.gene78860:CDS |
| GTTCCAAGAAGCATCATCAA+AGG | 0.612545 | 3.1:-3540612 | None:intergenic |
| ACGAAGATATGTCCAGGGTG+TGG | 0.615696 | 3.1:-3538336 | None:intergenic |
| ATTCATCATTCGGCTTGCAG+TGG | 0.618403 | 3.1:+3538828 | MS.gene78860:CDS |
| CTGCTTGATACATTAACCGC+AGG | 0.618547 | 3.1:+3538873 | MS.gene78860:CDS |
| TCAGTTTACGAGTTTCAGAA+GGG | 0.618605 | 3.1:-3537244 | None:intergenic |
| ACTGTTCTGATAGCAGTGGA+TGG | 0.623425 | 3.1:-3540521 | None:intergenic |
| ATGATGCCTATGCCTCTCCA+AGG | 0.630735 | 3.1:-3542317 | None:intergenic |
| CCAAAGGTAACTCAATGTCA+TGG | 0.635359 | 3.1:-3536375 | None:intergenic |
| TCCTGGCAGTCTTACACCAG+GGG | 0.636917 | 3.1:-3540696 | None:intergenic |
| ACCTACTGTTCTGATAGCAG+TGG | 0.643120 | 3.1:-3540525 | None:intergenic |
| TCTTACACCAGGGGAAGGAG+CGG | 0.646620 | 3.1:-3540687 | None:intergenic |
| TCCACTGCTATCAGAACAGT+AGG | 0.650409 | 3.1:+3540524 | MS.gene78860:CDS |
| GAGAAGGATTAATAGGCCAA+AGG | 0.655734 | 3.1:-3540634 | None:intergenic |
| TTGAAATATATAGCACACAT+GGG | 0.660600 | 3.1:+3538615 | MS.gene78860:CDS |
| AGACTGCCAGGAGGAAATGG+TGG | 0.661112 | 3.1:+3540707 | MS.gene78860:CDS |
| TGAAACAAACTCTAGTACAG+GGG | 0.662791 | 3.1:+3539945 | MS.gene78860:CDS |
| TATGGCTGAGACTGTTCGGG+AGG | 0.665136 | 3.1:+3540787 | MS.gene78860:CDS |
| CAGACACTCAACAATGCCGA+AGG | 0.668211 | 3.1:+3540066 | MS.gene78860:CDS |
| AGACCTGCTTGATAAAGTGT+TGG | 0.670804 | 3.1:-3538113 | None:intergenic |
| ATGGTGGTATACAAACCCAA+AGG | 0.677582 | 3.1:-3536391 | None:intergenic |
| ATTCGTCAATAACCCTATGG+TGG | 0.680473 | 3.1:-3536407 | None:intergenic |
| ATACTGTACAGGACTTGCAG+CGG | 0.691882 | 3.1:+3542184 | MS.gene78860:CDS |
| TATACACGAAGATATGTCCA+GGG | 0.692791 | 3.1:-3538341 | None:intergenic |
| TGGCTAGGGATCGATTGGAG+CGG | 0.702575 | 3.1:+3538294 | MS.gene78860:CDS |
| GAAGTTTATAGCAATTTCGG+CGG | 0.708760 | 3.1:+3536240 | MS.gene78860:CDS |
| CCTGGTGTAAGACTGCCAGG+AGG | 0.781422 | 3.1:+3540698 | MS.gene78860:CDS |
| GCAACCACTGAAGAGCTACG+AGG | 0.788194 | 3.1:+3539574 | MS.gene78860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATTATTTATTATGTCA+TGG | + | chr3.1:3538052-3538071 | MS.gene78860:intron | 10.0% |
| !!! | AATATTCAATTTTCAAAAAA+AGG | - | chr3.1:3537492-3537511 | None:intergenic | 10.0% |
| !!! | ATTTTTATTATTTTGTTGAA+AGG | - | chr3.1:3541811-3541830 | None:intergenic | 10.0% |
| !! | AAACAAAAACAACAAAAATA+AGG | + | chr3.1:3541240-3541259 | MS.gene78860:intron | 15.0% |
| !! | AATAAAAATTGAAAGATTTC+AGG | - | chr3.1:3539063-3539082 | None:intergenic | 15.0% |
| !! | ATAAATTTATTGAAGAATCA+AGG | + | chr3.1:3542276-3542295 | MS.gene78860:intron | 15.0% |
| !! | TTGTTAAACAAAAAAATAAC+AGG | + | chr3.1:3541417-3541436 | MS.gene78860:intron | 15.0% |
| !!! | ATTATTGTAATTTTATAGCT+TGG | + | chr3.1:3538544-3538563 | MS.gene78860:intron | 15.0% |
| !!! | GATTTTATTAAGGTTTTATT+TGG | + | chr3.1:3542250-3542269 | MS.gene78860:intron | 15.0% |
| !!! | TTTTCAAAAAAAGGAAAATA+AGG | - | chr3.1:3537483-3537502 | None:intergenic | 15.0% |
| !!! | TTTTCTGCATAATAAAATTA+AGG | - | chr3.1:3542128-3542147 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTTTATGAAATAG+CGG | - | chr3.1:3541229-3541248 | None:intergenic | 15.0% |
| !! | AAAAAGAACAATGTTGATAT+AGG | - | chr3.1:3537174-3537193 | None:intergenic | 20.0% |
| !! | AAAAGAAAATCAATAAACAC+AGG | - | chr3.1:3539461-3539480 | None:intergenic | 20.0% |
| !! | AAAAGAACAATGTTGATATA+GGG | - | chr3.1:3537173-3537192 | None:intergenic | 20.0% |
| !! | AACCTTAATAAAATCACATT+TGG | - | chr3.1:3542245-3542264 | None:intergenic | 20.0% |
| !! | AAGAAAGTTGAATGAAAAAA+TGG | - | chr3.1:3539030-3539049 | None:intergenic | 20.0% |
| !! | AAGAATTTATAGTTCATTGT+AGG | + | chr3.1:3536911-3536930 | MS.gene78860:intron | 20.0% |
| !! | AAGAGAATCATATATAAAAC+AGG | - | chr3.1:3538975-3538994 | None:intergenic | 20.0% |
| !! | AATAACTAATCAACTCTATT+GGG | + | chr3.1:3538929-3538948 | MS.gene78860:intron | 20.0% |
| !! | ACATGATATGATAAGTAATA+AGG | - | chr3.1:3536950-3536969 | None:intergenic | 20.0% |
| !! | ATGCATTAACTACTATATAA+TGG | + | chr3.1:3537805-3537824 | MS.gene78860:intron | 20.0% |
| !! | CTTGAAATAAATCAAATAAG+AGG | - | chr3.1:3540335-3540354 | None:intergenic | 20.0% |
| !! | TAATAACTAATCAACTCTAT+TGG | + | chr3.1:3538928-3538947 | MS.gene78860:intron | 20.0% |
| !! | TACAATGAACTATAAATTCT+TGG | - | chr3.1:3536912-3536931 | None:intergenic | 20.0% |
| !! | TATTATTTATTATGTCATGG+TGG | + | chr3.1:3538055-3538074 | MS.gene78860:intron | 20.0% |
| !! | TGCATTAACTACTATATAAT+GGG | + | chr3.1:3537806-3537825 | MS.gene78860:intron | 20.0% |
| !! | TTGGTTTAAAAAGAAAACAA+GGG | - | chr3.1:3541532-3541551 | None:intergenic | 20.0% |
| !! | TTTCTCTTAAAATGAAATAG+CGG | + | chr3.1:3541566-3541585 | MS.gene78860:intron | 20.0% |
| !!! | AAGTAATTTTTTCTGAACTT+TGG | + | chr3.1:3540901-3540920 | MS.gene78860:intron | 20.0% |
| !!! | ACATGTATTTTTATGAGAAA+AGG | + | chr3.1:3537048-3537067 | MS.gene78860:intron | 20.0% |
| !!! | AGTAATTTTTTCTGAACTTT+GGG | + | chr3.1:3540902-3540921 | MS.gene78860:intron | 20.0% |
| !!! | CATGTATTTTTATGAGAAAA+GGG | + | chr3.1:3537049-3537068 | MS.gene78860:intron | 20.0% |
| !!! | CTTAGATTTAATTTTCGTAA+AGG | + | chr3.1:3538503-3538522 | MS.gene78860:intron | 20.0% |
| !!! | GTTCTTAATTTGCATAAATT+TGG | + | chr3.1:3539406-3539425 | MS.gene78860:intron | 20.0% |
| !!! | TACTTTTGAAGTAATTTAGT+AGG | + | chr3.1:3537104-3537123 | MS.gene78860:intron | 20.0% |
| !!! | TCAAAAACATTTTCCTTTTA+TGG | - | chr3.1:3537756-3537775 | None:intergenic | 20.0% |
| !!! | TCATTTTAAACTAAGATAGA+GGG | + | chr3.1:3536618-3536637 | MS.gene78860:intron | 20.0% |
| !!! | TTCATTTTAAACTAAGATAG+AGG | + | chr3.1:3536617-3536636 | MS.gene78860:intron | 20.0% |
| ! | AAATCAGTTCAGAAACATAT+AGG | - | chr3.1:3539847-3539866 | None:intergenic | 25.0% |
| ! | AACTAGAACAAAAAAGTAAC+AGG | + | chr3.1:3541377-3541396 | MS.gene78860:intron | 25.0% |
| ! | AAGGGAATTATTACCATAAA+AGG | + | chr3.1:3537740-3537759 | MS.gene78860:intron | 25.0% |
| ! | AATGATCCAAACATAGATTA+TGG | + | chr3.1:3536766-3536785 | MS.gene78860:intron | 25.0% |
| ! | AATTTATAAGCTAGTTGACA+TGG | + | chr3.1:3537543-3537562 | MS.gene78860:intron | 25.0% |
| ! | ACTATAGTAGTAAAAAGGAT+CGG | + | chr3.1:3540239-3540258 | MS.gene78860:intron | 25.0% |
| ! | AGAAAATACAAAATTGTCCT+TGG | - | chr3.1:3541551-3541570 | None:intergenic | 25.0% |
| ! | AGCACCTAGTAAATATATAT+GGG | + | chr3.1:3537673-3537692 | MS.gene78860:intron | 25.0% |
| ! | ATAAATAAACGAAGACTTGT+GGG | - | chr3.1:3540308-3540327 | None:intergenic | 25.0% |
| ! | ATAAATAGATTATGCCCAAA+GGG | + | chr3.1:3536510-3536529 | MS.gene78860:intron | 25.0% |
| ! | ATAACTAATCAACTCTATTG+GGG | + | chr3.1:3538930-3538949 | MS.gene78860:intron | 25.0% |
| ! | ATGTAATCGTTAGAGAAAAT+TGG | + | chr3.1:3541062-3541081 | MS.gene78860:intron | 25.0% |
| ! | CAAACACTATAGTAGTAAAA+AGG | + | chr3.1:3540234-3540253 | MS.gene78860:intron | 25.0% |
| ! | CCACATACAAAAAGATAAAA+TGG | - | chr3.1:3540377-3540396 | None:intergenic | 25.0% |
| ! | CTTGGTTTAAAAAGAAAACA+AGG | - | chr3.1:3541533-3541552 | None:intergenic | 25.0% |
| ! | GATTTATTTCAAGATCAGAA+TGG | + | chr3.1:3540342-3540361 | MS.gene78860:intron | 25.0% |
| ! | GGATTTAATTAGATTGTTCA+TGG | + | chr3.1:3538749-3538768 | MS.gene78860:intron | 25.0% |
| ! | TAATTATGTGGTATAACTGT+AGG | + | chr3.1:3539203-3539222 | MS.gene78860:intron | 25.0% |
| ! | TACAGTTATACCACATAATT+AGG | - | chr3.1:3539204-3539223 | None:intergenic | 25.0% |
| ! | TATAAATAGATTATGCCCAA+AGG | + | chr3.1:3536509-3536528 | MS.gene78860:intron | 25.0% |
| ! | TATAACTGTAGGTTCTTTAT+TGG | + | chr3.1:3539214-3539233 | MS.gene78860:intron | 25.0% |
| ! | TATACCATGGAAAAAAATCA+TGG | - | chr3.1:3537142-3537161 | None:intergenic | 25.0% |
| ! | TATTTGACAACACAGTTTAA+GGG | + | chr3.1:3542012-3542031 | MS.gene78860:intron | 25.0% |
| ! | TCACACTAATCAGATTATTT+CGG | - | chr3.1:3539118-3539137 | None:intergenic | 25.0% |
| ! | TGTAATCGTTAGAGAAAATT+GGG | + | chr3.1:3541063-3541082 | MS.gene78860:intron | 25.0% |
| ! | TGTGAAGTTTATAGCAATTT+CGG | + | chr3.1:3536237-3536256 | MS.gene78860:CDS | 25.0% |
| ! | TTAGAGAAACTTAAATCAGA+TGG | + | chr3.1:3536313-3536332 | MS.gene78860:CDS | 25.0% |
| ! | TTCAAAAGTAAAGAAAGAGA+GGG | - | chr3.1:3537094-3537113 | None:intergenic | 25.0% |
| ! | TTGAAATATATAGCACACAT+GGG | + | chr3.1:3538615-3538634 | MS.gene78860:CDS | 25.0% |
| ! | TTGAGGAACAAAAATATGTA+TGG | + | chr3.1:3541121-3541140 | MS.gene78860:intron | 25.0% |
| ! | TTGGTCATTACTTGTATATA+TGG | + | chr3.1:3539303-3539322 | MS.gene78860:CDS | 25.0% |
| ! | TTTAACATAAATGACAGCTA+GGG | + | chr3.1:3538447-3538466 | MS.gene78860:intron | 25.0% |
| ! | TTTGGATCATTCAAAAGTAA+AGG | - | chr3.1:3536757-3536776 | None:intergenic | 25.0% |
| !! | AACATTGTTCTTTTTGTTCA+TGG | + | chr3.1:3537179-3537198 | MS.gene78860:intron | 25.0% |
| !! | AGTGTAATTTTCGTTCTTTT+AGG | + | chr3.1:3536680-3536699 | MS.gene78860:intron | 25.0% |
| !! | ATACTATAACTTGTACAAGT+TGG | + | chr3.1:3541885-3541904 | MS.gene78860:intron | 25.0% |
| !! | ATGGTAATAATTCCCTTTTA+TGG | - | chr3.1:3537737-3537756 | None:intergenic | 25.0% |
| !! | CAAAAAATCTAAAACATACC+TGG | - | chr3.1:3540844-3540863 | None:intergenic | 25.0% |
| !! | CCATTTTATCTTTTTGTATG+TGG | + | chr3.1:3540374-3540393 | MS.gene78860:intron | 25.0% |
| !! | CGTTAATTATGTCATTTACA+AGG | + | chr3.1:3537277-3537296 | MS.gene78860:CDS | 25.0% |
| !! | CTCCAAATGTGATTTTATTA+AGG | + | chr3.1:3542240-3542259 | MS.gene78860:intron | 25.0% |
| !! | GAATATTTTCGTTCATATGT+TGG | + | chr3.1:3537505-3537524 | MS.gene78860:intron | 25.0% |
| !! | GATTAGTTATTATAAGTTCC+AGG | - | chr3.1:3538920-3538939 | None:intergenic | 25.0% |
| !! | GTGTAATTTTCGTTCTTTTA+GGG | + | chr3.1:3536681-3536700 | MS.gene78860:intron | 25.0% |
| !! | GTTTTATATGAACAAAACAG+AGG | + | chr3.1:3541284-3541303 | MS.gene78860:intron | 25.0% |
| !! | TACCTTTAAAGAACAAAGTA+CGG | - | chr3.1:3538156-3538175 | None:intergenic | 25.0% |
| !! | TCAAAAACAGTTTCCTTTTA+TGG | - | chr3.1:3537942-3537961 | None:intergenic | 25.0% |
| !! | TGTAATTTTCGTTCTTTTAG+GGG | + | chr3.1:3536682-3536701 | MS.gene78860:intron | 25.0% |
| !!! | AAATTTAATTTGCTCATGAC+AGG | + | chr3.1:3539693-3539712 | MS.gene78860:intron | 25.0% |
| !!! | AACATTATTTTTTGCCGATT+TGG | + | chr3.1:3540419-3540438 | MS.gene78860:intron | 25.0% |
| !!! | AAGGAGTTCACTTATTTTTT+TGG | + | chr3.1:3542101-3542120 | MS.gene78860:intron | 25.0% |
| !!! | AGCATTGTTATTCATTTTCT+TGG | + | chr3.1:3538367-3538386 | MS.gene78860:CDS | 25.0% |
| !!! | CTTGTTTTCTTTTTAAACCA+AGG | + | chr3.1:3541531-3541550 | MS.gene78860:intron | 25.0% |
| !!! | TAAAAGGCTTTATTAGACTA+AGG | + | chr3.1:3539515-3539534 | MS.gene78860:CDS | 25.0% |
| !!! | TATGTTTCTGAACTGATTTT+AGG | + | chr3.1:3539848-3539867 | MS.gene78860:intron | 25.0% |
| !!! | TTAGTTCTTTTCTTTTTCTG+TGG | + | chr3.1:3537300-3537319 | MS.gene78860:intron | 25.0% |
| !!! | TTATTGATTTTCTTTTGAGC+AGG | + | chr3.1:3539465-3539484 | MS.gene78860:intron | 25.0% |
| AAAATAAGTGAACTCCTTCA+AGG | - | chr3.1:3542099-3542118 | None:intergenic | 30.0% | |
| AAGTAATTTAGTAGGCTACA+AGG | + | chr3.1:3537112-3537131 | MS.gene78860:intron | 30.0% | |
| AATGAAACAAACTCTAGTAC+AGG | + | chr3.1:3539943-3539962 | MS.gene78860:CDS | 30.0% | |
| ACTCATCCATAATCTATGTT+TGG | - | chr3.1:3536775-3536794 | None:intergenic | 30.0% | |
| ACTGGTTAAGGATATGAAAA+AGG | - | chr3.1:3537831-3537850 | None:intergenic | 30.0% | |
| AGCACCCATATATATTTACT+AGG | - | chr3.1:3537680-3537699 | None:intergenic | 30.0% | |
| AGTAATTTAGTAGGCTACAA+GGG | + | chr3.1:3537113-3537132 | MS.gene78860:intron | 30.0% | |
| ATAAGGAACACGATGAAAAA+AGG | - | chr3.1:3537466-3537485 | None:intergenic | 30.0% | |
| ATGAAACAAACTCTAGTACA+GGG | + | chr3.1:3539944-3539963 | MS.gene78860:CDS | 30.0% | |
| ATGAATGGTATGATAACTGA+TGG | + | chr3.1:3540930-3540949 | MS.gene78860:intron | 30.0% | |
| ATTTGAGCTTCCTAATTATG+TGG | + | chr3.1:3539191-3539210 | MS.gene78860:intron | 30.0% | |
| CAAGTAGTGTTAAAGTAGAA+TGG | + | chr3.1:3536646-3536665 | MS.gene78860:intron | 30.0% | |
| CAAGTCTTCGTTTATTTATC+TGG | + | chr3.1:3540309-3540328 | MS.gene78860:intron | 30.0% | |
| CATATTTAACCCTCAAGAAT+TGG | - | chr3.1:3541785-3541804 | None:intergenic | 30.0% | |
| CCAAGATCCAAAATGTTAAA+GGG | + | chr3.1:3541924-3541943 | MS.gene78860:intron | 30.0% | |
| CTATTTGACAACACAGTTTA+AGG | + | chr3.1:3542011-3542030 | MS.gene78860:intron | 30.0% | |
| CTTCAAAAGTAAAGAAAGAG+AGG | - | chr3.1:3537095-3537114 | None:intergenic | 30.0% | |
| CTTGAAATATATAGCACACA+TGG | + | chr3.1:3538614-3538633 | MS.gene78860:CDS | 30.0% | |
| GAAATGGTGGTTTACATATA+AGG | + | chr3.1:3540720-3540739 | MS.gene78860:CDS | 30.0% | |
| GAGCACCTAGTAAATATATA+TGG | + | chr3.1:3537672-3537691 | MS.gene78860:intron | 30.0% | |
| GATAAATAAACGAAGACTTG+TGG | - | chr3.1:3540309-3540328 | None:intergenic | 30.0% | |
| GATTTCAGTTACTTGACATA+TGG | + | chr3.1:3538805-3538824 | MS.gene78860:CDS | 30.0% | |
| GTAATCGTTAGAGAAAATTG+GGG | + | chr3.1:3541064-3541083 | MS.gene78860:intron | 30.0% | |
| GTCATTACTTGTATATATGG+CGG | + | chr3.1:3539306-3539325 | MS.gene78860:CDS | 30.0% | |
| GTTTAACATAAATGACAGCT+AGG | + | chr3.1:3538446-3538465 | MS.gene78860:intron | 30.0% | |
| TAAAAAATGTGGCCATATCT+AGG | - | chr3.1:3539277-3539296 | None:intergenic | 30.0% | |
| TAAATCTAAGCATGCTCAAA+CGG | - | chr3.1:3538493-3538512 | None:intergenic | 30.0% | |
| TAACTAATCAACTCTATTGG+GGG | + | chr3.1:3538931-3538950 | MS.gene78860:intron | 30.0% | |
| TAAGCTCACAAAAGTTGTTA+TGG | + | chr3.1:3536992-3537011 | MS.gene78860:intron | 30.0% | |
| TAAGGAACACGATGAAAAAA+GGG | - | chr3.1:3537465-3537484 | None:intergenic | 30.0% | |
| TACTTATCATATCATGTTGC+TGG | + | chr3.1:3536953-3536972 | MS.gene78860:intron | 30.0% | |
| TAGATAAGAAAAGGCCAAAT+CGG | - | chr3.1:3540436-3540455 | None:intergenic | 30.0% | |
| TATCAAGCAGTTTAGTTGTT+CGG | - | chr3.1:3538863-3538882 | None:intergenic | 30.0% | |
| TATTATGCAGTATGTACAAG+AGG | + | chr3.1:3540172-3540191 | MS.gene78860:intron | 30.0% | |
| TCAAAAGTAAAGAAAGAGAG+GGG | - | chr3.1:3537093-3537112 | None:intergenic | 30.0% | |
| TCATAAAAATACATGTCTGC+AGG | - | chr3.1:3537044-3537063 | None:intergenic | 30.0% | |
| TCCAAGATCCAAAATGTTAA+AGG | + | chr3.1:3541923-3541942 | MS.gene78860:intron | 30.0% | |
| TGAATGGTATGATAACTGAT+GGG | + | chr3.1:3540931-3540950 | MS.gene78860:intron | 30.0% | |
| TGACATATGGATTCATCATT+CGG | + | chr3.1:3538818-3538837 | MS.gene78860:CDS | 30.0% | |
| TGGTTAAGCATACCATAAAA+GGG | + | chr3.1:3537722-3537741 | MS.gene78860:intron | 30.0% | |
| TTGTCAAATAGTGACTATTG+AGG | - | chr3.1:3542002-3542021 | None:intergenic | 30.0% | |
| ! | ACTTCTCTTTTTATGCTTCT+AGG | + | chr3.1:3538579-3538598 | MS.gene78860:intron | 30.0% |
| ! | ATTTATTATGTCATGGTGGA+TGG | + | chr3.1:3538059-3538078 | MS.gene78860:intron | 30.0% |
| ! | GCTGTCATTTATGTTAAACA+AGG | - | chr3.1:3538445-3538464 | None:intergenic | 30.0% |
| ! | GTAATTTTCGTTCTTTTAGG+GGG | + | chr3.1:3536683-3536702 | MS.gene78860:intron | 30.0% |
| ! | GTCTAATAAAGCCTTTTATG+CGG | - | chr3.1:3539513-3539532 | None:intergenic | 30.0% |
| ! | TAAAGCTTTTGATACTGTAC+AGG | + | chr3.1:3542173-3542192 | MS.gene78860:CDS | 30.0% |
| !! | AGTTTGTTGACTTAGAGATA+TGG | + | chr3.1:3537638-3537657 | MS.gene78860:intron | 30.0% |
| !! | CTAGAGTTTGTTTCATTTTC+AGG | - | chr3.1:3539940-3539959 | None:intergenic | 30.0% |
| !! | CTTAAATCAGATGGACTAAT+TGG | + | chr3.1:3536322-3536341 | MS.gene78860:CDS | 30.0% |
| !! | TAATTTTCGTTCTTTTAGGG+GGG | + | chr3.1:3536684-3536703 | MS.gene78860:intron | 30.0% |
| !! | TTTCTGAACTGATTTTAGGT+TGG | + | chr3.1:3539852-3539871 | MS.gene78860:intron | 30.0% |
| !!! | AGATATGGCCACATTTTTTA+TGG | + | chr3.1:3539277-3539296 | MS.gene78860:CDS | 30.0% |
| !!! | CTTTTTATGCTTCTAGGATA+AGG | + | chr3.1:3538585-3538604 | MS.gene78860:intron | 30.0% |
| AAATCTAAGCATGCTCAAAC+GGG | - | chr3.1:3538492-3538511 | None:intergenic | 35.0% | |
| AAGGCTCAAAGAAAAGTAAC+AGG | - | chr3.1:3538652-3538671 | None:intergenic | 35.0% | |
| AATAGTCTGAATCAGTTTGC+AGG | - | chr3.1:3537343-3537362 | None:intergenic | 35.0% | |
| AATGGAAGGGAATACTTATC+CGG | + | chr3.1:3539237-3539256 | MS.gene78860:CDS | 35.0% | |
| ACAATTCGTCAATAACCCTA+TGG | - | chr3.1:3536413-3536432 | None:intergenic | 35.0% | |
| ACCAAGTGCCATAAAAAATG+TGG | - | chr3.1:3539288-3539307 | None:intergenic | 35.0% | |
| AGATGATAGTCCAATTCTTG+AGG | + | chr3.1:3541772-3541791 | MS.gene78860:intron | 35.0% | |
| AGATGGTAGAATCTCATTTG+AGG | + | chr3.1:3541104-3541123 | MS.gene78860:intron | 35.0% | |
| AGGATTTGATCGTCAAAACT+CGG | + | chr3.1:3540008-3540027 | MS.gene78860:CDS | 35.0% | |
| AGGTTCTTTATTGGAATGGA+AGG | + | chr3.1:3539223-3539242 | MS.gene78860:intron | 35.0% | |
| AGTGTTAAAGTAGAATGGCT+AGG | + | chr3.1:3536651-3536670 | MS.gene78860:intron | 35.0% | |
| ATAGTCTGAATCAGTTTGCA+GGG | - | chr3.1:3537342-3537361 | None:intergenic | 35.0% | |
| ATATACACGAAGATATGTCC+AGG | - | chr3.1:3538345-3538364 | None:intergenic | 35.0% | |
| ATCAGTTTACGAGTTTCAGA+AGG | - | chr3.1:3537248-3537267 | None:intergenic | 35.0% | |
| ATCTACTCTTATCATCATGC+TGG | + | chr3.1:3538728-3538747 | MS.gene78860:intron | 35.0% | |
| ATTACATCTCTAATCATGCC+TGG | - | chr3.1:3541049-3541068 | None:intergenic | 35.0% | |
| ATTAGACTAAGGATAGCTCT+AGG | + | chr3.1:3539526-3539545 | MS.gene78860:CDS | 35.0% | |
| CAAACATGAGATAATTGCGA+TGG | + | chr3.1:3541010-3541029 | MS.gene78860:intron | 35.0% | |
| CAAGGACTGTATTGTAAAAG+AGG | - | chr3.1:3538427-3538446 | None:intergenic | 35.0% | |
| CATGACATTGAGTTACCTTT+GGG | + | chr3.1:3536376-3536395 | MS.gene78860:CDS | 35.0% | |
| CCAAAAAAAAGAGAGACAGA+AGG | - | chr3.1:3540133-3540152 | None:intergenic | 35.0% | |
| CCATACATAGTAGTCAATAG+CGG | - | chr3.1:3541724-3541743 | None:intergenic | 35.0% | |
| CCTTCTTAATCTTAGTCTCA+AGG | + | chr3.1:3536450-3536469 | MS.gene78860:CDS | 35.0% | |
| CCTTGAGACTAAGATTAAGA+AGG | - | chr3.1:3536453-3536472 | None:intergenic | 35.0% | |
| CTGGTTAAGCATACCATAAA+AGG | + | chr3.1:3537721-3537740 | MS.gene78860:intron | 35.0% | |
| CTGTAGGTTCTTTATTGGAA+TGG | + | chr3.1:3539219-3539238 | MS.gene78860:intron | 35.0% | |
| GAAAAGTAACAGGAACATAG+AGG | - | chr3.1:3538642-3538661 | None:intergenic | 35.0% | |
| GAAGTTTATAGCAATTTCGG+CGG | + | chr3.1:3536240-3536259 | MS.gene78860:CDS | 35.0% | |
| GATGATAGTCCAATTCTTGA+GGG | + | chr3.1:3541773-3541792 | MS.gene78860:intron | 35.0% | |
| GCAATGATAAACCGCATAAA+AGG | + | chr3.1:3539499-3539518 | MS.gene78860:CDS | 35.0% | |
| GGTTCTTTATTGGAATGGAA+GGG | + | chr3.1:3539224-3539243 | MS.gene78860:intron | 35.0% | |
| GTTTGTATGTTCAGTACTTC+TGG | + | chr3.1:3536551-3536570 | MS.gene78860:intron | 35.0% | |
| TAGAGGAAGATTTACAGTAG+AGG | + | chr3.1:3541463-3541482 | MS.gene78860:intron | 35.0% | |
| TAGGGAAAAACGATATACCA+TGG | - | chr3.1:3537155-3537174 | None:intergenic | 35.0% | |
| TAGTCACATAGTAGGAAAGA+TGG | + | chr3.1:3541087-3541106 | MS.gene78860:intron | 35.0% | |
| TATACACGAAGATATGTCCA+GGG | - | chr3.1:3538344-3538363 | None:intergenic | 35.0% | |
| TATAGTTGTTGAAGCCTTGA+AGG | + | chr3.1:3542082-3542101 | MS.gene78860:intron | 35.0% | |
| TATCATATCATGTTGCTGGT+GGG | + | chr3.1:3536957-3536976 | MS.gene78860:intron | 35.0% | |
| TCAGTTTACGAGTTTCAGAA+GGG | - | chr3.1:3537247-3537266 | None:intergenic | 35.0% | |
| TGAAACAAACTCTAGTACAG+GGG | + | chr3.1:3539945-3539964 | MS.gene78860:CDS | 35.0% | |
| TGATTCTCTTTGCATTACCT+AGG | + | chr3.1:3538985-3539004 | MS.gene78860:intron | 35.0% | |
| TTATCATATCATGTTGCTGG+TGG | + | chr3.1:3536956-3536975 | MS.gene78860:intron | 35.0% | |
| TTCAAGGCTTCAACAACTAT+AGG | - | chr3.1:3542083-3542102 | None:intergenic | 35.0% | |
| TTTGGATAAAAGTCTGATCC+TGG | + | chr3.1:3538899-3538918 | MS.gene78860:intron | 35.0% | |
| ! | ACTTTTATCCAAACTACCTG+CGG | - | chr3.1:3538892-3538911 | None:intergenic | 35.0% |
| ! | ATATGAATTGCAGGCCATTT+TGG | + | chr3.1:3538776-3538795 | MS.gene78860:intron | 35.0% |
| ! | CATTTTGGATCTTGGAATCT+TGG | - | chr3.1:3541919-3541938 | None:intergenic | 35.0% |
| ! | CCCTTTAACATTTTGGATCT+TGG | - | chr3.1:3541927-3541946 | None:intergenic | 35.0% |
| ! | CTTGGGATTTTTCCTAGATA+TGG | + | chr3.1:3539262-3539281 | MS.gene78860:CDS | 35.0% |
| ! | GGAAGCATAGTAGTTAATAG+CGG | + | chr3.1:3541142-3541161 | MS.gene78860:intron | 35.0% |
| ! | TAAGTTGGAGTTGTATGTCA+TGG | - | chr3.1:3536850-3536869 | None:intergenic | 35.0% |
| ! | TATCCCGCTATAGCATTTTT+GGG | - | chr3.1:3541190-3541209 | None:intergenic | 35.0% |
| ! | TCTGCTACCCTTTAACATTT+TGG | - | chr3.1:3541934-3541953 | None:intergenic | 35.0% |
| ! | TTTAGCAAATGTGCTTGCTA+TGG | + | chr3.1:3540769-3540788 | MS.gene78860:CDS | 35.0% |
| !! | AGTTTGTTTCATTTTCAGGC+CGG | - | chr3.1:3539936-3539955 | None:intergenic | 35.0% |
| !! | GATTTGGCCTTTTCTTATCT+AGG | + | chr3.1:3540435-3540454 | MS.gene78860:intron | 35.0% |
| !! | TAGTAGTTAATAGCGGATAG+CGG | + | chr3.1:3541149-3541168 | MS.gene78860:intron | 35.0% |
| !! | TCATATGTTGGCTTAGTGTT+TGG | + | chr3.1:3537517-3537536 | MS.gene78860:intron | 35.0% |
| !! | TCTACGGTGTTAAGTTTTGT+AGG | + | chr3.1:3536265-3536284 | MS.gene78860:CDS | 35.0% |
| !! | TTTTCTTGGTTGATGTTCTC+TGG | + | chr3.1:3538381-3538400 | MS.gene78860:CDS | 35.0% |
| !!! | ACTGATTTTAGGTTGGATCA+AGG | + | chr3.1:3539859-3539878 | MS.gene78860:intron | 35.0% |
| !!! | CCTTCTGTCTCTCTTTTTTT+TGG | + | chr3.1:3540130-3540149 | MS.gene78860:intron | 35.0% |
| !!! | GTGTCCATGATTTTTTTCCA+TGG | + | chr3.1:3537135-3537154 | MS.gene78860:intron | 35.0% |
| AATTGGGGTAGTCACATAGT+AGG | + | chr3.1:3541079-3541098 | MS.gene78860:intron | 40.0% | |
| ACAAATCGACATGTCCCTTT+GGG | - | chr3.1:3536527-3536546 | None:intergenic | 40.0% | |
| ACCTGGAATATTATGTCGTC+CGG | - | chr3.1:3540827-3540846 | None:intergenic | 40.0% | |
| AGACATGCTATCACTTATCG+AGG | - | chr3.1:3539159-3539178 | None:intergenic | 40.0% | |
| AGACCTGCTTGATAAAGTGT+TGG | - | chr3.1:3538116-3538135 | None:intergenic | 40.0% | |
| AGATAATTGCGATGGATGGA+CGG | + | chr3.1:3541018-3541037 | MS.gene78860:intron | 40.0% | |
| ATAGCACTGCATCTACAAGA+TGG | - | chr3.1:3539349-3539368 | None:intergenic | 40.0% | |
| ATCAAAGGTTGTCTGAGCAT+AGG | - | chr3.1:3540600-3540619 | None:intergenic | 40.0% | |
| ATGAGACATCTTGCATCTGT+CGG | + | chr3.1:3540569-3540588 | MS.gene78860:CDS | 40.0% | |
| ATGATGCTTCTTGGAACCTT+TGG | + | chr3.1:3540618-3540637 | MS.gene78860:CDS | 40.0% | |
| ATGGTGGTATACAAACCCAA+AGG | - | chr3.1:3536394-3536413 | None:intergenic | 40.0% | |
| ATTATGTCGTCCGGAATATG+AGG | - | chr3.1:3540818-3540837 | None:intergenic | 40.0% | |
| ATTCGTCAATAACCCTATGG+TGG | - | chr3.1:3536410-3536429 | None:intergenic | 40.0% | |
| CACTTTATCAAGCAGGTCTT+TGG | + | chr3.1:3538117-3538136 | MS.gene78860:CDS | 40.0% | |
| CATGAGATAATTGCGATGGA+TGG | + | chr3.1:3541014-3541033 | MS.gene78860:intron | 40.0% | |
| CATGGTGTGATATGAATTGC+AGG | + | chr3.1:3538767-3538786 | MS.gene78860:intron | 40.0% | |
| CCAAAGGTAACTCAATGTCA+TGG | - | chr3.1:3536378-3536397 | None:intergenic | 40.0% | |
| CCATGACATTGAGTTACCTT+TGG | + | chr3.1:3536375-3536394 | MS.gene78860:CDS | 40.0% | |
| CGAAGACTTGTGGGAATAAA+AGG | - | chr3.1:3540299-3540318 | None:intergenic | 40.0% | |
| CTAGGAAAAATCCCAAGTTC+CGG | - | chr3.1:3539259-3539278 | None:intergenic | 40.0% | |
| CTGAAATCCATGCACCAAAA+TGG | - | chr3.1:3538793-3538812 | None:intergenic | 40.0% | |
| CTTAGAGCTACAATTGTCCT+TGG | + | chr3.1:3542300-3542319 | MS.gene78860:CDS | 40.0% | |
| GAACTTTGGGCATGTATGAA+TGG | + | chr3.1:3540915-3540934 | MS.gene78860:intron | 40.0% | |
| GAAGCCTGAGAAGGATTAAT+AGG | - | chr3.1:3540644-3540663 | None:intergenic | 40.0% | |
| GACAAGTATACATCTCAGTC+AGG | - | chr3.1:3539885-3539904 | None:intergenic | 40.0% | |
| GACTTGTGGGAATAAAAGGT+TGG | - | chr3.1:3540295-3540314 | None:intergenic | 40.0% | |
| GAGAAGGATTAATAGGCCAA+AGG | - | chr3.1:3540637-3540656 | None:intergenic | 40.0% | |
| GATACAAAATCCTCCTAGCT+CGG | + | chr3.1:3540194-3540213 | MS.gene78860:intron | 40.0% | |
| GATCAAATCCTGCACTCATT+TGG | - | chr3.1:3539999-3540018 | None:intergenic | 40.0% | |
| GCATTGTTGAGTGTCTGATT+TGG | - | chr3.1:3540063-3540082 | None:intergenic | 40.0% | |
| GGAATACTTATCCGGAACTT+GGG | + | chr3.1:3539245-3539264 | MS.gene78860:CDS | 40.0% | |
| GGCCGTACTTTGTTCTTTAA+AGG | + | chr3.1:3538151-3538170 | MS.gene78860:CDS | 40.0% | |
| GTCTCGAAAGCAATACTCAA+AGG | - | chr3.1:3538671-3538690 | None:intergenic | 40.0% | |
| GTTGCTGCAGACAACATATT+TGG | + | chr3.1:3539083-3539102 | MS.gene78860:intron | 40.0% | |
| GTTGTATGTCATGGACAAAC+CGG | - | chr3.1:3536841-3536860 | None:intergenic | 40.0% | |
| TACATATAAGGACCGCTTCA+CGG | + | chr3.1:3540732-3540751 | MS.gene78860:CDS | 40.0% | |
| TACATTAACCGCAGGTAGTT+TGG | + | chr3.1:3538881-3538900 | MS.gene78860:intron | 40.0% | |
| TAGCAAACACGACAAAGTAG+AGG | + | chr3.1:3541446-3541465 | MS.gene78860:intron | 40.0% | |
| TATCTCATGTTTGCAGCACT+AGG | - | chr3.1:3541003-3541022 | None:intergenic | 40.0% | |
| TGCATAGATGTTTCAAGCTC+TGG | + | chr3.1:3538274-3538293 | MS.gene78860:intron | 40.0% | |
| TGCTGAACAGCTAGAAATGA+TGG | - | chr3.1:3541866-3541885 | None:intergenic | 40.0% | |
| TGGCTGGAATTCAATTCACT+TGG | + | chr3.1:3536342-3536361 | MS.gene78860:CDS | 40.0% | |
| TGGGTTTGTATACCACCATA+GGG | + | chr3.1:3536395-3536414 | MS.gene78860:CDS | 40.0% | |
| TTGATTGCAAGACACTCCAT+TGG | + | chr3.1:3537431-3537450 | MS.gene78860:intron | 40.0% | |
| TTGCATTCTTGGCCAAATCA+GGG | + | chr3.1:3540482-3540501 | MS.gene78860:CDS | 40.0% | |
| TTGGCCTATTAATCCTTCTC+AGG | + | chr3.1:3540637-3540656 | MS.gene78860:CDS | 40.0% | |
| TTGGGTTTGTATACCACCAT+AGG | + | chr3.1:3536394-3536413 | MS.gene78860:CDS | 40.0% | |
| TTGTATATATGGCGGCTTCA+TGG | + | chr3.1:3539314-3539333 | MS.gene78860:CDS | 40.0% | |
| ! | ACTTGTACAAGTTGGCACTT+AGG | + | chr3.1:3541893-3541912 | MS.gene78860:intron | 40.0% |
| ! | ATCCCGCTATAGCATTTTTG+GGG | - | chr3.1:3541189-3541208 | None:intergenic | 40.0% |
| ! | CCGCTATTGACTACTATGTA+TGG | + | chr3.1:3541721-3541740 | MS.gene78860:intron | 40.0% |
| ! | CTATCCCGCTATAGCATTTT+TGG | - | chr3.1:3541191-3541210 | None:intergenic | 40.0% |
| ! | GAAGTTTTACAGAACAGCAG+AGG | + | chr3.1:3541490-3541509 | MS.gene78860:intron | 40.0% |
| ! | GAGAGGGGTGTAAAGTATTA+TGG | - | chr3.1:3537078-3537097 | None:intergenic | 40.0% |
| ! | GTGTGAAGATTTTACCTCCA+AGG | - | chr3.1:3540096-3540115 | None:intergenic | 40.0% |
| ! | TGATTTGGAAACAATCCTGC+AGG | - | chr3.1:3540048-3540067 | None:intergenic | 40.0% |
| !! | AATCAGATGGACTAATTGGC+TGG | + | chr3.1:3536326-3536345 | MS.gene78860:CDS | 40.0% |
| !! | CAACCTTTGATGATGCTTCT+TGG | + | chr3.1:3540609-3540628 | MS.gene78860:CDS | 40.0% |
| !! | GTCTCAAGGTGAGTTTGTTA+TGG | + | chr3.1:3536464-3536483 | MS.gene78860:intron | 40.0% |
| !! | GTTCCAAGAAGCATCATCAA+AGG | - | chr3.1:3540615-3540634 | None:intergenic | 40.0% |
| !! | TATATATGGGTGCTGCTAAC+CGG | + | chr3.1:3537686-3537705 | MS.gene78860:intron | 40.0% |
| !!! | AGCTTTTTAGCCTTAGCCAT+AGG | - | chr3.1:3539721-3539740 | None:intergenic | 40.0% |
| !!! | GCCACATTTTTTATGGCACT+TGG | + | chr3.1:3539284-3539303 | MS.gene78860:CDS | 40.0% |
| AAAAAGGGATGCCACACCAA+TGG | - | chr3.1:3537450-3537469 | None:intergenic | 45.0% | |
| AAAAGTGGCTTTCGGCATGT+TGG | - | chr3.1:3539907-3539926 | None:intergenic | 45.0% | |
| AAACGTGTCACGGATATCAG+GGG | + | chr3.1:3540262-3540281 | MS.gene78860:intron | 45.0% | |
| AAAGGATCGGAAACGTGTCA+CGG | + | chr3.1:3540252-3540271 | MS.gene78860:intron | 45.0% | |
| AAGCAGGTCTTTGGTCAACT+TGG | + | chr3.1:3538126-3538145 | MS.gene78860:CDS | 45.0% | |
| ACGATCTCAAACACGCAAGA+TGG | - | chr3.1:3539762-3539781 | None:intergenic | 45.0% | |
| AGACAGAAGGACATGTAGCA+TGG | - | chr3.1:3540120-3540139 | None:intergenic | 45.0% | |
| AGAGAGAGCAGAATGGAGTT+TGG | + | chr3.1:3541335-3541354 | MS.gene78860:intron | 45.0% | |
| AGCAATTTCGGCGGTTTCTA+CGG | + | chr3.1:3536249-3536268 | MS.gene78860:CDS | 45.0% | |
| AGCACGAGAAACTCTGCAAA+TGG | - | chr3.1:3536598-3536617 | None:intergenic | 45.0% | |
| AGCTACAATTGTCCTTGGAG+AGG | + | chr3.1:3542305-3542324 | MS.gene78860:CDS | 45.0% | |
| AGGTCTTTGGTCAACTTGGT+TGG | + | chr3.1:3538130-3538149 | MS.gene78860:CDS | 45.0% | |
| AGTACTTCTGGTAGACTACG+TGG | + | chr3.1:3536563-3536582 | MS.gene78860:intron | 45.0% | |
| ATAAATGACAGCTAGGGCTG+TGG | + | chr3.1:3538453-3538472 | MS.gene78860:intron | 45.0% | |
| ATACAACACATGCTCTGCCT+AGG | - | chr3.1:3539005-3539024 | None:intergenic | 45.0% | |
| ATACTGTACAGGACTTGCAG+CGG | + | chr3.1:3542184-3542203 | MS.gene78860:CDS | 45.0% | |
| ATAGCCTGCATGCGATAAGA+AGG | - | chr3.1:3537206-3537225 | None:intergenic | 45.0% | |
| ATATCCTCGTAGCTCTTCAG+TGG | - | chr3.1:3539581-3539600 | None:intergenic | 45.0% | |
| ATCATTTGCAGACCGTGAAG+CGG | - | chr3.1:3540747-3540766 | None:intergenic | 45.0% | |
| ATCGACCAGAAAGACAGGTT+TGG | - | chr3.1:3539641-3539660 | None:intergenic | 45.0% | |
| ATGACAGGAACCTATGGCTA+AGG | + | chr3.1:3539708-3539727 | MS.gene78860:intron | 45.0% | |
| CACAAATCGACATGTCCCTT+TGG | - | chr3.1:3536528-3536547 | None:intergenic | 45.0% | |
| CAGAAACAGAGAGAGCAGAA+TGG | + | chr3.1:3541328-3541347 | MS.gene78860:intron | 45.0% | |
| CCACCAACACTTTATCAAGC+AGG | + | chr3.1:3538110-3538129 | MS.gene78860:CDS | 45.0% | |
| CGACCCCAAAAATGCTATAG+CGG | + | chr3.1:3541183-3541202 | MS.gene78860:intron | 45.0% | |
| CTAGCTCGGCAATCAATCAA+TGG | + | chr3.1:3540208-3540227 | MS.gene78860:intron | 45.0% | |
| CTCTGTTTCGTCAAGCTTAC+CGG | + | chr3.1:3536819-3536838 | MS.gene78860:intron | 45.0% | |
| CTGCGCTCCTAGATAAGAAA+AGG | - | chr3.1:3540445-3540464 | None:intergenic | 45.0% | |
| CTGCTTGATACATTAACCGC+AGG | + | chr3.1:3538873-3538892 | MS.gene78860:CDS | 45.0% | |
| GAAACGTGTCACGGATATCA+GGG | + | chr3.1:3540261-3540280 | MS.gene78860:intron | 45.0% | |
| GACCCCAAAAATGCTATAGC+GGG | + | chr3.1:3541184-3541203 | MS.gene78860:intron | 45.0% | |
| GGAGGTTCTACCTCATATTC+CGG | + | chr3.1:3540805-3540824 | MS.gene78860:CDS | 45.0% | |
| GGGAATACTTATCCGGAACT+TGG | + | chr3.1:3539244-3539263 | MS.gene78860:CDS | 45.0% | |
| GTTGCATTCTTGGCCAAATC+AGG | + | chr3.1:3540481-3540500 | MS.gene78860:CDS | 45.0% | |
| GTTTGCCAAACCTGTCTTTC+TGG | + | chr3.1:3539633-3539652 | MS.gene78860:intron | 45.0% | |
| TAGCTCTTCAGTGGTTGCAT+CGG | - | chr3.1:3539572-3539591 | None:intergenic | 45.0% | |
| TATTGCTTTCGAGACACTGC+AGG | + | chr3.1:3538676-3538695 | MS.gene78860:CDS | 45.0% | |
| TCAAACACGCAAGATGGAAG+AGG | - | chr3.1:3539756-3539775 | None:intergenic | 45.0% | |
| TCAATGCGCTACAGTGCTAT+AGG | + | chr3.1:3541975-3541994 | MS.gene78860:intron | 45.0% | |
| TCCGGACGACATAATATTCC+AGG | + | chr3.1:3540823-3540842 | MS.gene78860:CDS | 45.0% | |
| TGGTCGATCTTGGTATCAGT+TGG | + | chr3.1:3539653-3539672 | MS.gene78860:intron | 45.0% | |
| TGTAAACCACCATTTCCTCC+TGG | - | chr3.1:3540716-3540735 | None:intergenic | 45.0% | |
| TTACCTCCAAGGAACACCTT+CGG | - | chr3.1:3540085-3540104 | None:intergenic | 45.0% | |
| TTGCTATGGCTGAGACTGTT+CGG | + | chr3.1:3540783-3540802 | MS.gene78860:CDS | 45.0% | |
| TTGCTCATGACAGGAACCTA+TGG | + | chr3.1:3539702-3539721 | MS.gene78860:intron | 45.0% | |
| ! | AGATGTTTCAAGCTCTGGCT+AGG | + | chr3.1:3538279-3538298 | MS.gene78860:intron | 45.0% |
| ! | ATCTTGCGTGTTTGAGATCG+TGG | + | chr3.1:3539761-3539780 | MS.gene78860:CDS | 45.0% |
| ! | ATTCATCATTCGGCTTGCAG+TGG | + | chr3.1:3538828-3538847 | MS.gene78860:CDS | 45.0% |
| ! | CATTGATTGATTGCCGAGCT+AGG | - | chr3.1:3540210-3540229 | None:intergenic | 45.0% |
| ! | GATGTTTCAAGCTCTGGCTA+GGG | + | chr3.1:3538280-3538299 | MS.gene78860:intron | 45.0% |
| !! | ACTCAGGTTGGTTGCATTCT+TGG | + | chr3.1:3540471-3540490 | MS.gene78860:CDS | 45.0% |
| !! | CAAAGGGACATGTCGATTTG+TGG | + | chr3.1:3536526-3536545 | MS.gene78860:intron | 45.0% |
| !! | CCTGCTTGATAAAGTGTTGG+TGG | - | chr3.1:3538113-3538132 | None:intergenic | 45.0% |
| !! | CTTTTCTTATCTAGGAGCGC+AGG | + | chr3.1:3540443-3540462 | MS.gene78860:intron | 45.0% |
| !! | GAGCGCTTTGGTTGATAAGT+TGG | - | chr3.1:3536865-3536884 | None:intergenic | 45.0% |
| !! | TATGTCATGGTGGATGGACA+GGG | + | chr3.1:3538065-3538084 | MS.gene78860:intron | 45.0% |
| !! | TTATGTCATGGTGGATGGAC+AGG | + | chr3.1:3538064-3538083 | MS.gene78860:intron | 45.0% |
| !!! | CGCTATAGCATTTTTGGGGT+CGG | - | chr3.1:3541185-3541204 | None:intergenic | 45.0% |
| !! | TTATTAAATATTATATTTGA+TGG | + | chr3.1:3542040-3542059 | MS.gene78860:intron | 5.0% |
| AAGCTAGTTGACATGGTCGC+AGG | + | chr3.1:3537550-3537569 | MS.gene78860:intron | 50.0% | |
| ACGAAGATATGTCCAGGGTG+TGG | - | chr3.1:3538339-3538358 | None:intergenic | 50.0% | |
| AGAACTGGCTATGAGCGCTT+TGG | - | chr3.1:3536877-3536896 | None:intergenic | 50.0% | |
| AGCTCTTCAGTGGTTGCATC+GGG | - | chr3.1:3539571-3539590 | None:intergenic | 50.0% | |
| ATATCCTTAACCAGTGCCCC+GGG | + | chr3.1:3537836-3537855 | MS.gene78860:intron | 50.0% | |
| CAGACACTCAACAATGCCGA+AGG | + | chr3.1:3540066-3540085 | MS.gene78860:CDS | 50.0% | |
| CATATCCTTAACCAGTGCCC+CGG | + | chr3.1:3537835-3537854 | MS.gene78860:intron | 50.0% | |
| CCAAGATCGACCAGAAAGAC+AGG | - | chr3.1:3539646-3539665 | None:intergenic | 50.0% | |
| GACCCATGGGAAATGCTAAC+CGG | - | chr3.1:3537865-3537884 | None:intergenic | 50.0% | |
| GCTAGACATAACATGCCTGC+AGG | + | chr3.1:3540030-3540049 | MS.gene78860:CDS | 50.0% | |
| GCTCCATCAACACCCTGATT+TGG | - | chr3.1:3540497-3540516 | None:intergenic | 50.0% | |
| GGAAACGTGTCACGGATATC+AGG | + | chr3.1:3540260-3540279 | MS.gene78860:intron | 50.0% | |
| GGCCTGCAAAAAGTGGCTTT+CGG | - | chr3.1:3539915-3539934 | None:intergenic | 50.0% | |
| GTAAGACTGCCAGGAGGAAA+TGG | + | chr3.1:3540704-3540723 | MS.gene78860:CDS | 50.0% | |
| TATATGGCGGCTTCATGGCA+TGG | + | chr3.1:3539319-3539338 | MS.gene78860:CDS | 50.0% | |
| TATCTCACACCGCAACGCTA+TGG | + | chr3.1:3541637-3541656 | MS.gene78860:intron | 50.0% | |
| TGATTGATTGCCGAGCTAGG+AGG | - | chr3.1:3540207-3540226 | None:intergenic | 50.0% | |
| TGCAAGACACTCCATTGGTG+TGG | + | chr3.1:3537436-3537455 | MS.gene78860:intron | 50.0% | |
| TGCTATGGCTGAGACTGTTC+GGG | + | chr3.1:3540784-3540803 | MS.gene78860:CDS | 50.0% | |
| TGGAGTGAAGACACCAGAAC+TGG | - | chr3.1:3536892-3536911 | None:intergenic | 50.0% | |
| TGGTATGCTTAACCAGTGCC+CGG | - | chr3.1:3537717-3537736 | None:intergenic | 50.0% | |
| TGGTCCTTCTTATCGCATGC+AGG | + | chr3.1:3537199-3537218 | MS.gene78860:intron | 50.0% | |
| ! | AAAGCGCTCATAGCCAGTTC+TGG | + | chr3.1:3536876-3536895 | MS.gene78860:intron | 50.0% |
| ! | AACGCTTCGTAGCGGTTTTG+CGG | - | chr3.1:3541599-3541618 | None:intergenic | 50.0% |
| ! | CACCGGTTAGCATTTCCCAT+GGG | + | chr3.1:3537860-3537879 | MS.gene78860:intron | 50.0% |
| ! | CCTGTCTTTCTGGTCGATCT+TGG | + | chr3.1:3539643-3539662 | MS.gene78860:intron | 50.0% |
| ! | GCGTGTTTGAGATCGTGGTA+TGG | + | chr3.1:3539766-3539785 | MS.gene78860:intron | 50.0% |
| !! | AATCAGGGTGTTGATGGAGC+TGG | + | chr3.1:3540497-3540516 | MS.gene78860:CDS | 50.0% |
| !! | ACAATGCCGAAGGTGTTCCT+TGG | + | chr3.1:3540076-3540095 | MS.gene78860:CDS | 50.0% |
| !! | AGGGACATGTCGATTTGTGG+TGG | + | chr3.1:3536529-3536548 | MS.gene78860:intron | 50.0% |
| !! | AGTGTTGGTGGCACAATCAG+TGG | - | chr3.1:3538101-3538120 | None:intergenic | 50.0% |
| !! | ATGTCATGGTGGATGGACAG+GGG | + | chr3.1:3538066-3538085 | MS.gene78860:intron | 50.0% |
| !! | TGGCCAAATCAGGGTGTTGA+TGG | + | chr3.1:3540491-3540510 | MS.gene78860:CDS | 50.0% |
| !! | TTGCAGGCCATTTTGGTGCA+TGG | + | chr3.1:3538783-3538802 | MS.gene78860:intron | 50.0% |
| !!! | GAAAGCCACTTTTTGCAGGC+CGG | + | chr3.1:3539914-3539933 | MS.gene78860:CDS | 50.0% |
| !!! | TGCCGAAAGCCACTTTTTGC+AGG | + | chr3.1:3539910-3539929 | MS.gene78860:CDS | 50.0% |
| AGACTGCCAGGAGGAAATGG+TGG | + | chr3.1:3540707-3540726 | MS.gene78860:CDS | 55.0% | |
| AGCGTTGCGGTGTGAGATAG+CGG | - | chr3.1:3541636-3541655 | None:intergenic | 55.0% | |
| CGCAACAAGCCATAGCGTTG+CGG | - | chr3.1:3541649-3541668 | None:intergenic | 55.0% | |
| CTCCTGGCAGTCTTACACCA+GGG | - | chr3.1:3540700-3540719 | None:intergenic | 55.0% | |
| CTTGCACGCCAAATGAGTGC+AGG | + | chr3.1:3539988-3540007 | MS.gene78860:CDS | 55.0% | |
| GCAACCACTGAAGAGCTACG+AGG | + | chr3.1:3539574-3539593 | MS.gene78860:CDS | 55.0% | |
| GGTATGCTTAACCAGTGCCC+GGG | - | chr3.1:3537716-3537735 | None:intergenic | 55.0% | |
| GTATGCTTAACCAGTGCCCG+GGG | - | chr3.1:3537715-3537734 | None:intergenic | 55.0% | |
| TATCCTTAACCAGTGCCCCG+GGG | + | chr3.1:3537837-3537856 | MS.gene78860:intron | 55.0% | |
| TATGCTTAACCAGTGCCCGG+GGG | - | chr3.1:3537714-3537733 | None:intergenic | 55.0% | |
| TATGGCTGAGACTGTTCGGG+AGG | + | chr3.1:3540787-3540806 | MS.gene78860:CDS | 55.0% | |
| TATGTCCAGGGTGTGGCAGA+TGG | - | chr3.1:3538332-3538351 | None:intergenic | 55.0% | |
| TCCTGGCAGTCTTACACCAG+GGG | - | chr3.1:3540699-3540718 | None:intergenic | 55.0% | |
| TCTTACACCAGGGGAAGGAG+CGG | - | chr3.1:3540690-3540709 | None:intergenic | 55.0% | |
| TGGCTAGGGATCGATTGGAG+CGG | + | chr3.1:3538294-3538313 | MS.gene78860:CDS | 55.0% | |
| TTCCACGAGTGGTCCAAGTC+AGG | + | chr3.1:3540661-3540680 | MS.gene78860:CDS | 55.0% | |
| TTCCCATGGGTCCTGCTAAC+CGG | + | chr3.1:3537873-3537892 | MS.gene78860:intron | 55.0% | |
| ! | AGCTCTGGCTAGGGATCGAT+TGG | + | chr3.1:3538289-3538308 | MS.gene78860:CDS | 55.0% |
| ! | CTTATCTAGGAGCGCAGGAC+TGG | + | chr3.1:3540448-3540467 | MS.gene78860:intron | 55.0% |
| ! | GTGAGATAGCGGCGCTATAG+CGG | - | chr3.1:3541625-3541644 | None:intergenic | 55.0% |
| !! | ATGCCGAAGGTGTTCCTTGG+AGG | + | chr3.1:3540079-3540098 | MS.gene78860:CDS | 55.0% |
| !! | GCACCGGTTAGCATTTCCCA+TGG | + | chr3.1:3537859-3537878 | MS.gene78860:intron | 55.0% |
| AAATGCTAACCGGTGCCCCG+GGG | - | chr3.1:3537855-3537874 | None:intergenic | 60.0% | |
| AGCGGTGCAACGCTTCGTAG+CGG | - | chr3.1:3541607-3541626 | None:intergenic | 60.0% | |
| CATCTCCATCTGCCACACCC+TGG | + | chr3.1:3538324-3538343 | MS.gene78860:CDS | 60.0% | |
| CCACTCGTGGAAGCCTGAGA+AGG | - | chr3.1:3540653-3540672 | None:intergenic | 60.0% | |
| CCTCCTGGCAGTCTTACACC+AGG | - | chr3.1:3540701-3540720 | None:intergenic | 60.0% | |
| CCTGGTGTAAGACTGCCAGG+AGG | + | chr3.1:3540698-3540717 | MS.gene78860:CDS | 60.0% | |
| CCTTCTCAGGCTTCCACGAG+TGG | + | chr3.1:3540650-3540669 | MS.gene78860:CDS | 60.0% | |
| GAAATGCTAACCGGTGCCCC+GGG | - | chr3.1:3537856-3537875 | None:intergenic | 60.0% | |
| GATGGATGGACGGCTACACC+AGG | + | chr3.1:3541028-3541047 | MS.gene78860:intron | 60.0% | |
| GGAAATGCTAACCGGTGCCC+CGG | - | chr3.1:3537857-3537876 | None:intergenic | 60.0% | |
| GGCAGTCTTACACCAGGGGA+AGG | - | chr3.1:3540695-3540714 | None:intergenic | 60.0% | |
| GGCCAATAGCGCCGCTATAG+CGG | - | chr3.1:3541703-3541722 | None:intergenic | 60.0% | |
| TCAGGCCGGCCTGCAAAAAG+TGG | - | chr3.1:3539922-3539941 | None:intergenic | 60.0% | |
| TCCCCTGGTGTAAGACTGCC+AGG | + | chr3.1:3540695-3540714 | MS.gene78860:CDS | 60.0% | |
| ! | CACCGGTTAGCAGGACCCAT+GGG | - | chr3.1:3537878-3537897 | None:intergenic | 60.0% |
| GAAGGAGCGGTCGCCTGACT+TGG | - | chr3.1:3540677-3540696 | None:intergenic | 65.0% | |
| GCGCAGGACTGGACTCAGGT+TGG | + | chr3.1:3540459-3540478 | MS.gene78860:CDS | 65.0% | |
| GGCCGCTATAGCGGCGCTAT+TGG | + | chr3.1:3541698-3541717 | MS.gene78860:intron | 65.0% | |
| TTAACCAGTGCCCGGGGCAC+CGG | - | chr3.1:3537895-3537914 | None:intergenic | 65.0% | |
| ! | AGGAGCGCAGGACTGGACTC+AGG | + | chr3.1:3540455-3540474 | MS.gene78860:intron | 65.0% |
| ! | TAGCGGATAGCGGCGCGTAG+CGG | + | chr3.1:3541159-3541178 | MS.gene78860:intron | 65.0% |
| !! | CGCCTGACTTGGACCACTCG+TGG | - | chr3.1:3540666-3540685 | None:intergenic | 65.0% |
| !! | GCACCGGTTAGCAGGACCCA+TGG | - | chr3.1:3537879-3537898 | None:intergenic | 65.0% |
| GGTCCTGCTAACCGGTGCCC+CGG | + | chr3.1:3537881-3537900 | MS.gene78860:intron | 70.0% | |
| GTCCTGCTAACCGGTGCCCC+GGG | + | chr3.1:3537882-3537901 | MS.gene78860:intron | 70.0% | |
| TAACCAGTGCCCCGGGGCAC+CGG | + | chr3.1:3537843-3537862 | MS.gene78860:intron | 70.0% | |
| TGCTGCTAACCGGTGCCCCC+GGG | + | chr3.1:3537696-3537715 | MS.gene78860:intron | 70.0% | |
| ! | GTGCTGCTAACCGGTGCCCC+CGG | + | chr3.1:3537695-3537714 | MS.gene78860:intron | 70.0% |
| ! | TAACCAGTGCCCGGGGGCAC+CGG | - | chr3.1:3537708-3537727 | None:intergenic | 70.0% |
| !! | GTGCCCCGGGGCACTGGTTA+AGG | - | chr3.1:3537843-3537862 | None:intergenic | 70.0% |
| CAGGCGACCGCTCCTTCCCC+TGG | + | chr3.1:3540680-3540699 | MS.gene78860:CDS | 75.0% | |
| CTAACCGGTGCCCCGGGCAC+TGG | + | chr3.1:3537888-3537907 | MS.gene78860:intron | 75.0% | |
| GCACCGCGCGGCCGCTATAG+CGG | + | chr3.1:3541689-3541708 | MS.gene78860:intron | 75.0% | |
| GCTATAGCGGCCGCGCGGTG+CGG | - | chr3.1:3541690-3541709 | None:intergenic | 75.0% | |
| TAACCGGTGCCCCCGGGCAC+TGG | + | chr3.1:3537702-3537721 | MS.gene78860:intron | 75.0% | |
| TAACCGGTGCCCCGGGGCAC+TGG | - | chr3.1:3537849-3537868 | None:intergenic | 75.0% | |
| !! | TGCCCGGGGCACCGGTTAGC+AGG | - | chr3.1:3537887-3537906 | None:intergenic | 75.0% |
| ! | CAGCACCGCACCGCACCGCG+CGG | + | chr3.1:3541677-3541696 | MS.gene78860:intron | 80.0% |
| ! | GCGCCGCTATAGCGGCCGCG+CGG | - | chr3.1:3541695-3541714 | None:intergenic | 80.0% |
| ! | AGCGGCCGCGCGGTGCGGTG+CGG | - | chr3.1:3541685-3541704 | None:intergenic | 85.0% |
| ! | CGCGCGGTGCGGTGCGGTGC+TGG | - | chr3.1:3541679-3541698 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 3536232 | 3542332 | 3536232 | ID=MS.gene78860 |
| chr3.1 | mRNA | 3536232 | 3542332 | 3536232 | ID=MS.gene78860.t1;Parent=MS.gene78860 |
| chr3.1 | exon | 3536232 | 3536471 | 3536232 | ID=MS.gene78860.t1.exon1;Parent=MS.gene78860.t1 |
| chr3.1 | CDS | 3536232 | 3536471 | 3536232 | ID=cds.MS.gene78860.t1;Parent=MS.gene78860.t1 |
| chr3.1 | exon | 3537221 | 3537298 | 3537221 | ID=MS.gene78860.t1.exon2;Parent=MS.gene78860.t1 |
| chr3.1 | CDS | 3537221 | 3537298 | 3537221 | ID=cds.MS.gene78860.t1;Parent=MS.gene78860.t1 |
| chr3.1 | exon | 3538086 | 3538172 | 3538086 | ID=MS.gene78860.t1.exon3;Parent=MS.gene78860.t1 |
| chr3.1 | CDS | 3538086 | 3538172 | 3538086 | ID=cds.MS.gene78860.t1;Parent=MS.gene78860.t1 |
| chr3.1 | exon | 3538281 | 3538402 | 3538281 | ID=MS.gene78860.t1.exon4;Parent=MS.gene78860.t1 |
| chr3.1 | CDS | 3538281 | 3538402 | 3538281 | ID=cds.MS.gene78860.t1;Parent=MS.gene78860.t1 |
| chr3.1 | exon | 3538601 | 3538697 | 3538601 | ID=MS.gene78860.t1.exon5;Parent=MS.gene78860.t1 |
| chr3.1 | CDS | 3538601 | 3538697 | 3538601 | ID=cds.MS.gene78860.t1;Parent=MS.gene78860.t1 |
| chr3.1 | exon | 3538789 | 3538894 | 3538789 | ID=MS.gene78860.t1.exon6;Parent=MS.gene78860.t1 |
| chr3.1 | CDS | 3538789 | 3538894 | 3538789 | ID=cds.MS.gene78860.t1;Parent=MS.gene78860.t1 |
| chr3.1 | exon | 3539225 | 3539382 | 3539225 | ID=MS.gene78860.t1.exon7;Parent=MS.gene78860.t1 |
| chr3.1 | CDS | 3539225 | 3539382 | 3539225 | ID=cds.MS.gene78860.t1;Parent=MS.gene78860.t1 |
| chr3.1 | exon | 3539487 | 3539624 | 3539487 | ID=MS.gene78860.t1.exon8;Parent=MS.gene78860.t1 |
| chr3.1 | CDS | 3539487 | 3539624 | 3539487 | ID=cds.MS.gene78860.t1;Parent=MS.gene78860.t1 |
| chr3.1 | exon | 3539715 | 3539782 | 3539715 | ID=MS.gene78860.t1.exon9;Parent=MS.gene78860.t1 |
| chr3.1 | CDS | 3539715 | 3539782 | 3539715 | ID=cds.MS.gene78860.t1;Parent=MS.gene78860.t1 |
| chr3.1 | exon | 3539870 | 3540100 | 3539870 | ID=MS.gene78860.t1.exon10;Parent=MS.gene78860.t1 |
| chr3.1 | CDS | 3539870 | 3540100 | 3539870 | ID=cds.MS.gene78860.t1;Parent=MS.gene78860.t1 |
| chr3.1 | exon | 3540457 | 3540844 | 3540457 | ID=MS.gene78860.t1.exon11;Parent=MS.gene78860.t1 |
| chr3.1 | CDS | 3540457 | 3540844 | 3540457 | ID=cds.MS.gene78860.t1;Parent=MS.gene78860.t1 |
| chr3.1 | exon | 3542144 | 3542227 | 3542144 | ID=MS.gene78860.t1.exon12;Parent=MS.gene78860.t1 |
| chr3.1 | CDS | 3542144 | 3542227 | 3542144 | ID=cds.MS.gene78860.t1;Parent=MS.gene78860.t1 |
| chr3.1 | exon | 3542291 | 3542332 | 3542291 | ID=MS.gene78860.t1.exon13;Parent=MS.gene78860.t1 |
| chr3.1 | CDS | 3542291 | 3542332 | 3542291 | ID=cds.MS.gene78860.t1;Parent=MS.gene78860.t1 |
| Gene Sequence |
| Protein sequence |
