AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene78908

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78908.t1 MTR_8g042410 97.253 546 15 0 1 546 1 546 0.0 1109
MS.gene78908.t1 MTR_3g011610 53.704 540 213 9 2 528 1 516 0.0 526
MS.gene78908.t1 MTR_3g052430 81.739 115 21 0 37 151 41 155 5.44e-61 210
MS.gene78908.t1 MTR_3g052450 80.000 115 23 0 37 151 40 154 3.42e-60 208
MS.gene78908.t1 MTR_2g088170 76.860 121 28 0 37 157 29 149 1.84e-57 199
MS.gene78908.t1 MTR_1g021230 70.968 124 36 0 37 160 57 180 2.45e-56 195
MS.gene78908.t1 MTR_7g076740 65.741 108 36 1 37 143 12 119 1.49e-46 165
MS.gene78908.t1 MTR_8g031360 66.667 105 34 1 37 140 13 117 2.93e-45 161
MS.gene78908.t1 MTR_5g029840 62.264 106 40 0 35 140 10 115 1.17e-44 161
MS.gene78908.t1 MTR_1g100653 60.331 121 46 1 33 153 10 128 1.75e-44 159
MS.gene78908.t1 MTR_1g083630 64.912 114 40 0 35 148 10 123 3.49e-44 166
MS.gene78908.t1 MTR_4g478180 66.346 104 35 0 37 140 13 116 5.03e-44 160
MS.gene78908.t1 MTR_7g035075 62.136 103 39 0 37 139 14 116 6.70e-43 152
MS.gene78908.t1 MTR_2g011660 62.500 104 39 0 37 140 13 116 7.55e-43 156
MS.gene78908.t1 MTR_7g096930 63.462 104 38 0 37 140 12 115 7.62e-43 154
MS.gene78908.t1 MTR_4g073420 52.555 137 55 1 39 165 14 150 1.38e-42 154
MS.gene78908.t1 MTR_5g007370 39.111 225 117 6 37 253 12 224 1.42e-42 154
MS.gene78908.t1 MTR_4g091490 61.538 104 40 0 37 140 13 116 1.73e-42 155
MS.gene78908.t1 MTR_3g065440 60.185 108 43 0 35 142 10 117 1.83e-42 154
MS.gene78908.t1 MTR_5g078140 61.321 106 41 0 35 140 10 115 2.08e-42 154
MS.gene78908.t1 MTR_1g043080 61.538 104 40 0 37 140 12 115 2.12e-42 152
MS.gene78908.t1 MTR_1g076150 61.538 104 40 0 37 140 12 115 2.58e-42 152
MS.gene78908.t1 MTR_2g089620 61.818 110 41 1 37 145 12 121 2.80e-42 154
MS.gene78908.t1 MTR_7g115650 58.654 104 43 0 37 140 12 115 4.69e-42 150
MS.gene78908.t1 MTR_1g110460 52.991 117 55 0 26 142 15 131 5.34e-42 153
MS.gene78908.t1 MTR_3g097450 65.686 102 35 0 39 140 14 115 5.72e-42 152
MS.gene78908.t1 MTR_1g043050 61.538 104 40 0 37 140 12 115 7.99e-42 151
MS.gene78908.t1 MTR_6g006030 61.165 103 40 0 37 139 14 116 8.32e-42 149
MS.gene78908.t1 MTR_2g034790 60.377 106 42 0 35 140 10 115 9.71e-42 153
MS.gene78908.t1 MTR_3g074520 61.538 104 40 0 37 140 12 115 1.12e-41 153
MS.gene78908.t1 MTR_8g095390 63.725 102 37 0 39 140 14 115 1.92e-41 152
MS.gene78908.t1 MTR_1g086530 56.481 108 47 0 35 142 31 138 6.01e-41 149
MS.gene78908.t1 MTR_1g085040 61.321 106 41 0 37 142 12 117 6.76e-41 152
MS.gene78908.t1 MTR_1g073170 60.952 105 41 0 38 142 21 125 6.92e-41 148
MS.gene78908.t1 MTR_4g121460 58.491 106 44 0 35 140 10 115 9.93e-41 150
MS.gene78908.t1 MTR_0140s0030 60.577 104 41 0 37 140 13 116 1.44e-40 150
MS.gene78908.t1 MTR_0489s0020 60.577 104 41 0 37 140 13 116 1.44e-40 150
MS.gene78908.t1 MTR_4g102380 60.577 104 41 0 37 140 12 115 1.50e-40 148
MS.gene78908.t1 MTR_1g085640 62.264 106 40 0 37 142 12 117 1.69e-40 151
MS.gene78908.t1 MTR_7g110830 61.321 106 41 0 37 142 12 117 1.85e-40 150
MS.gene78908.t1 MTR_1g045610 56.637 113 45 1 32 140 12 124 1.91e-40 147
MS.gene78908.t1 MTR_3g083540 58.491 106 44 0 35 140 39 144 2.21e-40 148
MS.gene78908.t1 MTR_8g027345 59.434 106 43 0 35 140 10 115 2.23e-40 148
MS.gene78908.t1 MTR_4g082230 61.321 106 41 0 35 140 10 115 2.37e-40 151
MS.gene78908.t1 MTR_7g011170 59.434 106 43 0 35 140 10 115 2.56e-40 148
MS.gene78908.t1 MTR_6g012180 64.646 99 35 0 37 135 12 110 3.08e-40 148
MS.gene78908.t1 MTR_2g064160 58.654 104 43 0 37 140 11 114 3.18e-40 148
MS.gene78908.t1 MTR_2g097910 58.654 104 43 0 37 140 20 123 3.64e-40 148
MS.gene78908.t1 MTR_6g090405 55.046 109 48 1 37 144 12 120 4.57e-40 146
MS.gene78908.t1 MTR_4g082290 60.377 106 42 0 35 140 10 115 5.13e-40 150
MS.gene78908.t1 MTR_7g117730 56.604 106 46 0 35 140 10 115 6.57e-40 145
MS.gene78908.t1 MTR_6g012690 59.434 106 43 0 35 140 10 115 7.20e-40 149
MS.gene78908.t1 MTR_7g010210 58.491 106 44 0 37 142 12 117 1.58e-39 147
MS.gene78908.t1 MTR_7g010210 58.491 106 44 0 37 142 12 117 1.94e-39 145
MS.gene78908.t1 MTR_0251s0050 58.654 104 43 0 37 140 13 116 3.98e-39 144
MS.gene78908.t1 MTR_1g086510 58.416 101 42 0 37 137 21 121 6.57e-39 143
MS.gene78908.t1 MTR_1g112760 58.654 104 43 0 37 140 13 116 6.78e-39 142
MS.gene78908.t1 MTR_7g087130 60.377 106 42 0 35 140 10 115 7.50e-39 145
MS.gene78908.t1 MTR_0008s0390 58.654 104 43 0 37 140 13 116 7.55e-39 143
MS.gene78908.t1 MTR_5g079670 56.731 104 45 0 37 140 11 114 8.37e-39 141
MS.gene78908.t1 MTR_2g067420 62.626 99 37 0 37 135 14 112 1.03e-38 144
MS.gene78908.t1 MTR_0008s0470 57.692 104 44 0 37 140 13 116 1.08e-38 143
MS.gene78908.t1 MTR_2g099740 57.692 104 44 0 37 140 12 115 1.17e-38 146
MS.gene78908.t1 MTR_3g039990 55.556 108 48 0 35 142 11 118 1.20e-38 144
MS.gene78908.t1 MTR_4g105130 58.654 104 43 0 37 140 12 115 1.92e-38 145
MS.gene78908.t1 MTR_3g077110 58.654 104 43 0 37 140 12 115 2.27e-38 144
MS.gene78908.t1 MTR_1g062940 48.889 135 67 1 33 165 2 136 2.54e-38 140
MS.gene78908.t1 MTR_4g065017 57.692 104 44 0 37 140 17 120 2.69e-38 144
MS.gene78908.t1 MTR_8g098860 55.660 106 47 0 37 142 12 117 5.27e-38 142
MS.gene78908.t1 MTR_5g014990 57.143 105 44 1 37 140 12 116 5.47e-38 142
MS.gene78908.t1 MTR_4g125520 56.731 104 45 0 37 140 12 115 9.96e-38 141
MS.gene78908.t1 MTR_8g017440 55.769 104 46 0 37 140 12 115 1.48e-37 142
MS.gene78908.t1 MTR_1g017140 57.143 105 44 1 37 140 12 116 1.79e-37 141
MS.gene78908.t1 MTR_0063s0090 54.955 111 46 1 28 138 7 113 1.81e-37 138
MS.gene78908.t1 MTR_8g017540 56.731 104 45 0 37 140 58 161 1.92e-37 143
MS.gene78908.t1 MTR_5g088080 53.097 113 52 1 38 149 13 125 2.57e-37 139
MS.gene78908.t1 MTR_5g088150 53.097 113 52 1 38 149 13 125 2.57e-37 139
MS.gene78908.t1 MTR_5g488210 53.097 113 52 1 38 149 13 125 2.57e-37 139
MS.gene78908.t1 MTR_2g089450 59.223 103 42 0 37 139 12 114 3.32e-37 138
MS.gene78908.t1 MTR_5g088640 53.097 113 52 1 38 149 13 125 3.49e-37 139
MS.gene78908.t1 MTR_5g488170 53.097 113 52 1 38 149 13 125 4.20e-37 137
MS.gene78908.t1 MTR_3g028740 55.769 104 46 0 37 140 22 125 4.71e-37 140
MS.gene78908.t1 MTR_7g111290 62.245 98 37 0 37 134 12 109 4.75e-37 141
MS.gene78908.t1 MTR_8g017500 55.769 104 46 0 37 140 12 115 4.88e-37 140
MS.gene78908.t1 MTR_5g062790 51.667 120 57 1 31 149 3 122 5.63e-37 139
MS.gene78908.t1 MTR_3g103570 55.238 105 46 1 37 140 12 116 7.88e-37 140
MS.gene78908.t1 MTR_4g057635 53.704 108 49 1 37 143 12 119 9.17e-37 139
MS.gene78908.t1 MTR_7g109320 61.321 106 41 0 35 140 10 115 9.70e-37 140
MS.gene78908.t1 MTR_5g010020 57.576 99 42 0 37 135 12 110 9.72e-37 139
MS.gene78908.t1 MTR_5g088610 42.941 170 88 4 31 198 3 165 1.03e-36 140
MS.gene78908.t1 MTR_0008s0280 54.902 102 46 0 38 139 13 114 1.55e-36 135
MS.gene78908.t1 MTR_4g485530 55.882 102 45 0 39 140 14 115 3.91e-36 133
MS.gene78908.t1 MTR_1g017000 49.565 115 57 1 37 150 12 126 5.14e-36 135
MS.gene78908.t1 MTR_8g006470 53.271 107 49 1 37 142 10 116 6.56e-36 135
MS.gene78908.t1 MTR_2g095520 58.000 100 41 1 37 135 12 111 1.12e-35 136
MS.gene78908.t1 MTR_1g100667 57.282 103 44 0 38 140 14 116 1.18e-35 134
MS.gene78908.t1 MTR_2g089420 55.769 104 46 0 37 140 11 114 2.02e-35 138
MS.gene78908.t1 MTR_7g102110 53.333 105 48 1 37 140 12 116 2.21e-35 134
MS.gene78908.t1 MTR_4g128670 59.000 100 40 1 37 135 12 111 2.70e-35 135
MS.gene78908.t1 MTR_6g009430 54.808 104 47 0 37 140 12 115 2.83e-35 135
MS.gene78908.t1 MTR_5g042030 56.731 104 45 0 37 140 7 110 2.86e-35 134
MS.gene78908.t1 MTR_4g029540 44.966 149 75 4 25 171 2 145 3.69e-35 134
MS.gene78908.t1 MTR_3g461490 53.846 104 48 0 37 140 12 115 4.24e-35 134
MS.gene78908.t1 MTR_4g097570 57.576 99 41 1 37 134 12 110 5.29e-35 133
MS.gene78908.t1 MTR_4g063100 53.846 104 48 0 38 141 8 111 8.58e-35 132
MS.gene78908.t1 MTR_8g020490 53.846 104 48 0 37 140 8 111 1.09e-34 131
MS.gene78908.t1 MTR_2g096380 53.846 104 48 0 37 140 6 109 2.36e-34 130
MS.gene78908.t1 MTR_2g033170 47.727 132 62 1 8 139 2 126 9.40e-34 131
MS.gene78908.t1 MTR_8g017340 53.333 105 48 1 37 140 12 116 9.45e-34 134
MS.gene78908.t1 MTR_8g017390 53.333 105 48 1 37 140 12 116 9.88e-34 134
MS.gene78908.t1 MTR_8g017350 53.333 105 48 1 37 140 12 116 1.62e-33 135
MS.gene78908.t1 MTR_4g097570 57.000 100 41 2 37 134 12 111 1.84e-33 129
MS.gene78908.t1 MTR_4g100720 51.923 104 50 0 37 140 13 116 5.27e-33 124
MS.gene78908.t1 MTR_6g055910 53.398 103 48 0 38 140 15 117 1.64e-32 126
MS.gene78908.t1 MTR_5g079120 50.962 104 51 0 37 140 61 164 2.92e-32 126
MS.gene78908.t1 MTR_4g123040 55.340 103 46 0 37 139 24 126 8.69e-32 125
MS.gene78908.t1 MTR_5g078910 49.038 104 53 0 37 140 7 110 4.25e-31 122
MS.gene78908.t1 MTR_1g085880 46.405 153 74 3 37 187 11 157 7.26e-31 119
MS.gene78908.t1 MTR_8g060940 51.485 101 49 0 37 137 7 107 8.71e-31 120
MS.gene78908.t1 MTR_5g078860 50.962 104 51 0 37 140 7 110 1.36e-30 121
MS.gene78908.t1 MTR_0197s0010 49.515 103 52 0 41 143 5 107 1.56e-30 119
MS.gene78908.t1 MTR_5g079290 48.077 104 54 0 37 140 17 120 1.71e-30 120
MS.gene78908.t1 MTR_5g078800 49.038 104 53 0 37 140 7 110 1.80e-30 120
MS.gene78908.t1 MTR_0247s0040 49.020 102 52 0 37 138 7 108 1.85e-30 117
MS.gene78908.t1 MTR_1g085770 46.405 153 74 3 37 187 11 157 3.32e-30 120
MS.gene78908.t1 MTR_7g017260 48.113 106 53 1 37 140 25 130 4.88e-30 119
MS.gene78908.t1 MTR_5g078950 50.000 102 51 0 37 138 7 108 9.56e-30 118
MS.gene78908.t1 MTR_5g079220 47.115 104 55 0 37 140 21 124 2.41e-29 117
MS.gene78908.t1 MTR_5g078930 50.495 101 50 0 38 138 10 110 3.16e-29 115
MS.gene78908.t1 MTR_0193s0090 47.573 103 54 0 37 139 7 109 6.91e-29 114
MS.gene78908.t1 MTR_0001s0360 47.115 104 55 0 37 140 7 110 1.87e-28 114
MS.gene78908.t1 MTR_4g019370 49.533 107 53 1 39 145 38 143 2.29e-27 113
MS.gene78908.t1 MTR_5g016510 50.000 102 50 1 39 140 5 105 3.64e-27 112
MS.gene78908.t1 MTR_5g070020 48.113 106 52 2 36 140 119 222 4.69e-27 112
MS.gene78908.t1 MTR_7g111290 69.697 66 20 0 69 134 2 67 1.29e-26 111
MS.gene78908.t1 MTR_4g063100 61.111 72 28 0 69 140 10 81 1.44e-26 108
MS.gene78908.t1 MTR_4g128190 43.750 112 49 2 37 147 11 109 2.04e-26 108
MS.gene78908.t1 MTR_3g101290 46.226 106 56 1 39 144 37 141 2.63e-26 107
MS.gene78908.t1 MTR_5g007300 57.143 77 33 0 37 113 64 140 5.48e-26 103
MS.gene78908.t1 MTR_5g049190 47.115 104 52 2 39 141 19 120 6.04e-26 107
MS.gene78908.t1 MTR_3g045430 43.810 105 59 0 36 140 12 116 1.25e-25 107
MS.gene78908.t1 MTR_4g094982 47.059 102 53 1 39 140 5 105 1.77e-25 106
MS.gene78908.t1 MTR_7g037260 48.571 105 52 2 39 143 145 247 1.80e-25 108
MS.gene78908.t1 MTR_3g077650 37.415 147 82 3 18 155 153 298 2.18e-25 109
MS.gene78908.t1 MTR_2g096380 59.722 72 29 0 69 140 19 90 3.98e-25 103
MS.gene78908.t1 MTR_5g082910 48.214 112 57 1 39 150 19 129 4.83e-25 105
MS.gene78908.t1 MTR_3g463400 46.226 106 54 2 37 141 131 234 6.25e-25 108
MS.gene78908.t1 MTR_4g105660 41.085 129 71 3 30 155 171 297 7.03e-25 107
MS.gene78908.t1 MTR_7g451170 47.573 103 53 1 39 141 191 292 9.92e-25 107
MS.gene78908.t1 MTR_6g055910 60.563 71 28 0 70 140 18 88 1.24e-24 103
MS.gene78908.t1 MTR_4g088015 47.619 105 53 2 37 141 219 321 1.30e-24 107
MS.gene78908.t1 MTR_7g061330 50.000 104 51 1 37 140 111 213 1.62e-24 107
MS.gene78908.t1 MTR_7g461410 50.000 104 51 1 37 140 111 213 1.62e-24 107
MS.gene78908.t1 MTR_7g061330 50.000 104 51 1 37 140 75 177 2.27e-24 107
MS.gene78908.t1 MTR_6g015455 48.544 103 50 2 39 140 5 105 2.97e-24 108
MS.gene78908.t1 MTR_1g026870 45.192 104 56 1 37 140 83 185 5.85e-24 107
MS.gene78908.t1 MTR_1g057980 32.683 205 111 7 37 220 78 276 1.26e-23 101
MS.gene78908.t1 MTR_4g082040 40.310 129 74 2 31 158 97 223 1.30e-23 103
MS.gene78908.t1 MTR_7g035350 50.515 97 47 1 39 135 225 320 2.37e-23 103
MS.gene78908.t1 MTR_6g074860 41.593 113 65 1 36 148 1 112 2.80e-23 99.4
MS.gene78908.t1 MTR_3g110028 44.231 104 57 1 37 140 83 185 2.96e-23 104
MS.gene78908.t1 MTR_5g041570 41.463 123 69 2 39 160 134 254 1.47e-22 100
MS.gene78908.t1 MTR_6g027340 42.056 107 61 1 39 145 16 121 1.82e-22 95.9
MS.gene78908.t1 MTR_6g027360 42.727 110 60 2 37 145 76 183 3.58e-22 97.8
MS.gene78908.t1 MTR_7g450950 36.184 152 76 6 1 135 105 252 1.82e-21 96.3
MS.gene78908.t1 MTR_7g086960 39.850 133 77 2 18 148 66 197 2.00e-21 96.3
MS.gene78908.t1 MTR_7g037130 41.071 112 60 2 37 143 143 253 2.17e-21 96.3
MS.gene78908.t1 MTR_3g089045 41.129 124 70 2 39 161 16 137 1.95e-20 92.4
MS.gene78908.t1 MTR_7g061550 41.748 103 58 1 42 142 10 112 1.34e-19 90.9
MS.gene78908.t1 MTR_6g027370 38.333 120 73 1 26 145 86 204 1.60e-19 90.5
MS.gene78908.t1 MTR_5g010650 44.898 98 53 1 37 134 108 204 2.00e-19 91.7
MS.gene78908.t1 MTR_0023s0210 44.156 77 43 0 37 113 7 83 5.38e-17 76.3
MS.gene78908.t1 MTR_5g038910 33.333 138 77 3 5 142 6 128 1.70e-16 82.4
MS.gene78908.t1 MTR_5g038910 33.333 138 77 3 5 142 6 128 3.79e-16 80.9
MS.gene78908.t1 MTR_8g468380 38.384 99 60 1 42 140 25 122 1.27e-15 79.7
MS.gene78908.t1 MTR_4g063100 58.696 46 19 0 95 140 1 46 1.41e-13 69.7
MS.gene78908.t1 MTR_2g096380 56.522 46 20 0 95 140 1 46 1.66e-12 66.2
MS.gene78908.t1 MTR_6g055910 54.348 46 21 0 95 140 2 47 3.52e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78908.t1 AT3G11440 41.165 532 264 14 36 539 40 550 1.40e-107 333
MS.gene78908.t1 AT3G11440 41.165 532 264 14 36 539 40 550 1.40e-107 333
MS.gene78908.t1 AT3G11440 41.165 532 264 14 36 539 40 550 1.40e-107 333
MS.gene78908.t1 AT5G06100 40.113 531 259 15 34 545 29 519 1.56e-101 316
MS.gene78908.t1 AT5G06100 40.113 531 259 15 34 545 29 519 1.56e-101 316
MS.gene78908.t1 AT5G06100 40.113 531 259 15 34 545 29 519 1.56e-101 316
MS.gene78908.t1 AT5G06100 40.113 531 259 15 34 545 29 519 1.56e-101 316
MS.gene78908.t1 AT3G11440 47.354 378 172 9 36 388 40 415 1.28e-94 296
MS.gene78908.t1 AT5G06100 46.978 364 171 11 34 378 29 389 1.91e-87 277
MS.gene78908.t1 AT5G55020 80.000 120 24 0 34 153 23 142 6.81e-66 223
MS.gene78908.t1 AT2G32460 75.591 127 31 0 31 157 12 138 2.96e-64 218
MS.gene78908.t1 AT2G32460 77.419 124 28 0 34 157 3 126 3.18e-64 217
MS.gene78908.t1 AT4G26930 74.603 126 32 0 29 154 11 136 8.14e-63 211
MS.gene78908.t1 AT2G26960 38.719 359 159 12 37 365 20 347 3.51e-61 208
MS.gene78908.t1 AT3G61250 66.346 104 35 0 37 140 12 115 4.30e-46 164
MS.gene78908.t1 AT3G02940 66.346 104 35 0 37 140 12 115 7.95e-46 163
MS.gene78908.t1 AT3G02940 66.346 104 35 0 37 140 12 115 1.51e-45 163
MS.gene78908.t1 AT3G02940 66.346 104 35 0 37 140 12 115 1.51e-45 163
MS.gene78908.t1 AT5G16770 63.462 104 38 0 37 140 12 115 7.56e-44 159
MS.gene78908.t1 AT5G16770 63.462 104 38 0 37 140 12 115 7.56e-44 159
MS.gene78908.t1 AT5G65230 63.462 104 38 0 37 140 12 115 9.42e-44 158
MS.gene78908.t1 AT5G16770 63.462 104 38 0 37 140 12 115 1.31e-43 158
MS.gene78908.t1 AT5G16770 63.462 104 38 0 37 140 12 115 1.31e-43 158
MS.gene78908.t1 AT4G21440 63.462 104 38 0 37 140 12 115 3.08e-43 157
MS.gene78908.t1 AT3G01530 51.145 131 60 1 9 139 1 127 9.49e-43 152
MS.gene78908.t1 AT1G66230 60.185 108 43 0 35 142 10 117 1.62e-42 154
MS.gene78908.t1 AT3G13540 59.615 104 42 0 37 140 23 126 2.16e-42 152
MS.gene78908.t1 AT1G22640 62.500 104 39 0 37 140 12 115 3.10e-42 152
MS.gene78908.t1 AT4G28110 58.182 110 45 1 37 145 12 121 3.22e-42 153
MS.gene78908.t1 AT4G38620 64.706 102 36 0 39 140 14 115 5.32e-42 152
MS.gene78908.t1 AT2G16720 63.462 104 38 0 37 140 12 115 5.41e-42 152
MS.gene78908.t1 AT4G09460 63.725 102 37 0 39 140 14 115 7.01e-42 150
MS.gene78908.t1 AT1G35515 61.538 104 40 0 37 140 12 115 7.90e-42 149
MS.gene78908.t1 AT3G27810 59.223 103 42 0 37 139 20 122 1.00e-41 150
MS.gene78908.t1 AT5G10280 62.500 104 39 0 37 140 12 115 1.18e-41 153
MS.gene78908.t1 AT3G23250 58.407 113 47 0 37 149 12 124 1.28e-41 151
MS.gene78908.t1 AT4G05100 61.538 104 40 0 37 140 13 116 1.28e-41 152
MS.gene78908.t1 AT1G57560 45.509 167 87 2 37 199 12 178 1.97e-41 150
MS.gene78908.t1 AT2G31180 59.633 109 44 0 37 145 12 120 2.42e-41 149
MS.gene78908.t1 AT5G40350 59.223 103 42 0 37 139 17 119 3.02e-41 148
MS.gene78908.t1 AT5G49330 58.491 106 44 0 35 140 10 115 3.34e-41 152
MS.gene78908.t1 AT5G16600 61.111 108 42 0 35 142 10 117 4.55e-41 151
MS.gene78908.t1 AT5G54230 60.577 104 41 0 37 140 12 115 6.64e-41 150
MS.gene78908.t1 AT1G34670 61.538 104 40 0 37 140 12 115 8.11e-41 151
MS.gene78908.t1 AT5G61420 58.879 107 44 0 34 140 9 115 9.08e-41 151
MS.gene78908.t1 AT4G12350 59.434 106 43 0 35 140 10 115 9.67e-41 149
MS.gene78908.t1 AT1G57560 48.052 154 75 4 37 185 12 165 1.13e-40 149
MS.gene78908.t1 AT5G07690 59.434 106 43 0 34 139 9 114 1.19e-40 150
MS.gene78908.t1 AT3G01140 60.577 104 41 0 37 140 12 115 1.27e-40 150
MS.gene78908.t1 AT1G16490 58.654 104 43 0 37 140 14 117 1.53e-40 148
MS.gene78908.t1 AT5G14750 59.223 103 42 0 38 140 17 119 1.94e-40 145
MS.gene78908.t1 AT5G15310 59.615 104 42 0 37 140 12 115 1.94e-40 149
MS.gene78908.t1 AT4G34990 62.745 102 38 0 39 140 14 115 1.99e-40 148
MS.gene78908.t1 AT1G08810 60.377 106 42 0 35 140 10 115 2.03e-40 148
MS.gene78908.t1 AT5G15310 59.615 104 42 0 37 140 12 115 2.28e-40 149
MS.gene78908.t1 AT4G22680 60.577 104 41 0 37 140 12 115 2.28e-40 147
MS.gene78908.t1 AT1G68320 57.547 106 45 0 37 142 19 124 2.35e-40 148
MS.gene78908.t1 AT5G07700 57.944 107 45 0 34 140 9 115 2.36e-40 149
MS.gene78908.t1 AT5G07700 57.944 107 45 0 34 140 9 115 2.36e-40 149
MS.gene78908.t1 AT5G15310 59.615 104 42 0 37 140 12 115 2.50e-40 147
MS.gene78908.t1 AT1G06180 60.377 106 42 0 35 140 10 115 2.68e-40 146
MS.gene78908.t1 AT3G01140 60.577 104 41 0 37 140 55 158 2.72e-40 150
MS.gene78908.t1 AT1G74650 59.434 106 43 0 35 140 10 115 2.82e-40 149
MS.gene78908.t1 AT3G28910 61.538 104 40 0 37 140 12 115 3.00e-40 149
MS.gene78908.t1 AT2G47460 59.434 106 43 0 35 140 10 115 3.33e-40 150
MS.gene78908.t1 AT1G79180 58.654 104 43 0 37 140 14 117 4.77e-40 147
MS.gene78908.t1 AT4G17785 59.615 104 42 0 37 140 13 116 5.59e-40 149
MS.gene78908.t1 AT4G17785 59.615 104 42 0 37 140 13 116 5.95e-40 149
MS.gene78908.t1 AT1G25340 55.046 109 49 0 34 142 15 123 8.08e-40 146
MS.gene78908.t1 AT4G01680 60.377 106 42 0 37 142 12 117 9.77e-40 145
MS.gene78908.t1 AT3G13890 57.692 104 44 0 37 140 12 115 1.30e-39 148
MS.gene78908.t1 AT1G18570 46.405 153 71 1 37 189 13 154 1.43e-39 147
MS.gene78908.t1 AT3G47600 58.491 106 44 0 35 140 10 115 1.85e-39 147
MS.gene78908.t1 AT5G40330 56.075 107 47 0 38 144 13 119 2.11e-39 143
MS.gene78908.t1 AT5G26660 58.491 106 44 0 37 142 12 117 2.56e-39 147
MS.gene78908.t1 AT4G13480 60.000 105 42 0 36 140 5 109 3.17e-39 144
MS.gene78908.t1 AT4G01680 60.377 106 42 0 37 142 12 117 3.22e-39 146
MS.gene78908.t1 AT5G14340 59.434 106 43 0 37 142 24 129 3.99e-39 144
MS.gene78908.t1 AT5G62470 58.491 106 44 0 35 140 10 115 5.73e-39 146
MS.gene78908.t1 AT3G24310 58.491 106 44 0 38 143 19 124 8.11e-39 143
MS.gene78908.t1 AT3G27920 57.282 103 44 0 38 140 15 117 1.68e-38 141
MS.gene78908.t1 AT4G37780 56.190 105 45 1 37 140 12 116 2.26e-38 143
MS.gene78908.t1 AT5G12870 57.547 106 45 0 37 142 18 123 2.84e-38 142
MS.gene78908.t1 AT2G26950 48.252 143 74 0 23 165 2 144 2.86e-38 145
MS.gene78908.t1 AT3G12720 52.586 116 55 0 25 140 10 125 4.12e-38 142
MS.gene78908.t1 AT5G62320 57.522 113 41 1 35 140 11 123 4.48e-38 140
MS.gene78908.t1 AT1G09540 58.654 104 43 0 37 140 12 115 6.28e-38 143
MS.gene78908.t1 AT1G63910 50.388 129 61 1 37 162 12 140 6.29e-38 144
MS.gene78908.t1 AT3G08500 56.731 104 45 0 37 140 30 133 7.04e-38 143
MS.gene78908.t1 AT2G47190 48.462 130 62 1 13 142 1 125 7.32e-38 140
MS.gene78908.t1 AT5G60890 57.547 106 45 0 37 142 12 117 1.03e-37 141
MS.gene78908.t1 AT1G56160 55.769 104 46 0 37 140 14 117 1.25e-37 140
MS.gene78908.t1 AT5G62470 58.491 106 43 1 35 140 10 114 1.26e-37 142
MS.gene78908.t1 AT3G12820 56.731 104 45 0 37 140 14 117 2.52e-37 138
MS.gene78908.t1 AT1G48000 52.381 105 50 0 35 139 30 134 2.61e-37 138
MS.gene78908.t1 AT3G49690 57.143 105 44 1 37 140 12 116 3.49e-37 140
MS.gene78908.t1 AT3G30210 57.547 106 45 0 38 143 28 133 5.50e-37 138
MS.gene78908.t1 AT3G62610 55.660 106 47 0 35 140 10 115 6.33e-37 140
MS.gene78908.t1 AT5G65790 56.190 105 45 1 37 140 12 116 7.96e-37 140
MS.gene78908.t1 AT3G13890 53.097 113 44 1 37 140 12 124 9.91e-37 140
MS.gene78908.t1 AT5G59780 57.282 103 44 0 38 140 9 111 1.19e-36 136
MS.gene78908.t1 AT3G60460 54.206 107 48 1 37 142 11 117 1.32e-36 138
MS.gene78908.t1 AT5G35550 54.808 104 47 0 37 140 14 117 1.41e-36 137
MS.gene78908.t1 AT1G74080 58.252 103 43 0 37 139 12 114 2.53e-36 138
MS.gene78908.t1 AT3G46130 56.311 103 45 0 38 140 10 112 2.61e-36 136
MS.gene78908.t1 AT4G01680 54.237 118 42 1 37 142 12 129 5.57e-36 137
MS.gene78908.t1 AT1G25340 52.294 109 47 1 34 142 15 118 9.05e-36 135
MS.gene78908.t1 AT5G52600 52.885 104 49 0 37 140 12 115 1.36e-35 132
MS.gene78908.t1 AT5G56110 53.846 104 48 0 37 140 12 115 1.85e-35 135
MS.gene78908.t1 AT1G25340 51.818 110 48 1 33 142 14 118 1.91e-35 135
MS.gene78908.t1 AT1G74430 54.808 104 47 0 37 140 12 115 2.37e-35 134
MS.gene78908.t1 AT5G23000 54.286 105 47 1 37 140 12 116 3.18e-35 135
MS.gene78908.t1 AT2G36890 53.043 115 51 2 37 150 12 124 4.04e-35 134
MS.gene78908.t1 AT5G57620 55.238 105 46 1 37 140 12 116 5.54e-35 134
MS.gene78908.t1 AT2G36890 53.043 115 51 2 37 150 53 165 6.67e-35 134
MS.gene78908.t1 AT3G06490 58.252 103 43 0 37 139 19 121 1.51e-34 133
MS.gene78908.t1 AT1G79180 44.526 137 43 1 37 140 14 150 9.64e-34 131
MS.gene78908.t1 AT3G28470 54.545 99 45 0 37 135 12 110 1.76e-33 130
MS.gene78908.t1 AT5G49620 50.862 116 57 0 24 139 13 128 7.08e-33 128
MS.gene78908.t1 AT1G18710 51.923 104 50 0 37 140 12 115 8.41e-33 127
MS.gene78908.t1 AT3G48920 53.922 102 47 0 38 139 19 120 9.43e-33 126
MS.gene78908.t1 AT3G53200 51.402 107 52 0 37 143 9 115 1.63e-32 125
MS.gene78908.t1 AT1G66370 50.476 105 52 0 37 141 8 112 5.63e-32 124
MS.gene78908.t1 AT5G52260 49.565 115 58 0 38 152 13 127 4.77e-31 122
MS.gene78908.t1 AT4G25560 47.748 111 58 0 30 140 3 113 9.86e-31 121
MS.gene78908.t1 AT1G66380 50.476 105 52 0 37 141 8 112 3.02e-30 115
MS.gene78908.t1 AT5G26660 62.821 78 29 0 65 142 9 86 8.89e-30 119
MS.gene78908.t1 AT5G49620 45.385 130 57 1 24 139 13 142 1.73e-29 119
MS.gene78908.t1 AT3G27810 64.286 70 25 0 70 139 4 73 2.21e-28 111
MS.gene78908.t1 AT5G40360 47.170 106 55 1 36 141 155 259 5.63e-28 115
MS.gene78908.t1 AT3G09230 52.941 102 47 1 39 140 55 155 6.48e-28 115
MS.gene78908.t1 AT1G56650 49.524 105 53 0 37 141 8 112 8.82e-28 112
MS.gene78908.t1 AT5G40350 62.857 70 26 0 70 139 5 74 2.90e-27 108
MS.gene78908.t1 AT4G18770 45.161 124 64 3 37 157 215 337 5.55e-27 114
MS.gene78908.t1 AT1G66390 49.524 105 53 0 37 141 8 112 6.92e-27 109
MS.gene78908.t1 AT2G23290 51.961 102 48 1 39 140 13 113 9.06e-27 110
MS.gene78908.t1 AT3G12820 65.217 69 24 0 72 140 1 69 1.24e-26 107
MS.gene78908.t1 AT5G14750 60.870 69 27 0 72 140 17 85 2.83e-26 105
MS.gene78908.t1 AT5G58850 47.619 105 52 2 37 140 103 205 6.05e-26 110
MS.gene78908.t1 AT4G37260 49.020 102 51 1 39 140 13 113 7.12e-26 108
MS.gene78908.t1 AT5G02320 50.000 104 51 1 37 140 125 227 8.20e-26 111
MS.gene78908.t1 AT5G02320 50.000 104 51 1 37 140 125 227 8.20e-26 111
MS.gene78908.t1 AT5G59780 60.274 73 29 0 68 140 18 90 8.88e-26 105
MS.gene78908.t1 AT3G46130 61.111 72 28 0 69 140 9 80 9.00e-26 105
MS.gene78908.t1 AT3G46130 60.274 73 29 0 68 140 18 90 9.91e-26 106
MS.gene78908.t1 AT5G02320 50.000 104 51 1 37 140 65 167 9.95e-26 110
MS.gene78908.t1 AT5G35550 60.563 71 28 0 70 140 50 120 1.22e-25 106
MS.gene78908.t1 AT3G55730 49.038 104 50 2 39 141 56 157 1.73e-25 108
MS.gene78908.t1 AT5G67300 49.020 102 51 1 39 140 6 106 2.09e-25 107
MS.gene78908.t1 AT3G50060 45.872 109 58 1 39 147 6 113 2.59e-25 106
MS.gene78908.t1 AT3G47600 61.972 71 27 0 70 140 39 109 2.74e-25 107
MS.gene78908.t1 AT5G11050 47.115 104 52 2 39 141 105 206 3.79e-25 108
MS.gene78908.t1 AT2G39880 50.485 103 48 2 39 140 50 150 4.23e-25 107
MS.gene78908.t1 AT3G53200 57.895 76 32 0 68 143 7 82 8.13e-25 102
MS.gene78908.t1 AT3G27785 45.714 105 56 1 37 141 187 290 1.21e-24 107
MS.gene78908.t1 AT3G09370 48.077 104 53 1 37 140 133 235 2.09e-24 107
MS.gene78908.t1 AT3G09370 48.077 104 53 1 37 140 128 230 2.16e-24 107
MS.gene78908.t1 AT3G09370 48.077 104 53 1 37 140 141 243 2.71e-24 107
MS.gene78908.t1 AT5G11510 38.194 144 70 4 37 164 79 219 1.10e-23 106
MS.gene78908.t1 AT5G11510 38.194 144 70 4 37 164 79 219 1.10e-23 106
MS.gene78908.t1 AT5G11510 38.194 144 70 4 37 164 79 219 1.10e-23 106
MS.gene78908.t1 AT4G33450 41.322 121 70 1 38 158 18 137 1.19e-23 100
MS.gene78908.t1 AT1G17950 43.966 116 62 2 35 149 1 114 1.36e-23 100
MS.gene78908.t1 AT5G11510 38.194 144 70 4 37 164 79 219 1.41e-23 105
MS.gene78908.t1 AT5G11510 38.194 144 70 4 37 164 79 219 1.41e-23 105
MS.gene78908.t1 AT4G32730 43.269 104 58 1 37 140 85 187 7.35e-23 103
MS.gene78908.t1 AT4G32730 43.269 104 58 1 37 140 85 187 7.35e-23 103
MS.gene78908.t1 AT4G32730 43.269 104 58 1 37 140 85 187 7.35e-23 103
MS.gene78908.t1 AT4G32730 43.269 104 58 1 37 140 85 187 7.35e-23 103
MS.gene78908.t1 AT4G32730 43.269 104 58 1 37 140 85 187 7.88e-23 103
MS.gene78908.t1 AT1G26780 45.370 108 56 2 36 142 95 200 2.33e-22 97.8
MS.gene78908.t1 AT1G18960 43.137 102 55 2 39 140 10 108 2.41e-22 98.2
MS.gene78908.t1 AT1G69560 44.860 107 56 2 37 142 121 225 2.43e-22 99.0
MS.gene78908.t1 AT1G26780 45.370 108 56 2 36 142 95 200 2.68e-22 99.0
MS.gene78908.t1 AT1G69560 44.860 107 56 2 37 142 105 209 2.81e-22 98.6
MS.gene78908.t1 AT2G25230 45.192 104 54 2 37 139 24 125 1.46e-21 94.4
MS.gene78908.t1 AT1G22640 68.421 57 18 0 84 140 2 58 7.86e-21 91.3
MS.gene78908.t1 AT1G66380 54.167 72 33 0 70 141 8 79 9.37e-21 87.8
MS.gene78908.t1 AT5G17800 40.602 133 72 3 16 142 64 195 1.08e-20 93.6
MS.gene78908.t1 AT4G00540 39.683 126 68 3 37 159 101 221 1.54e-20 94.4
MS.gene78908.t1 AT1G73410 44.037 109 58 2 35 142 2 108 1.77e-20 91.3
MS.gene78908.t1 AT4G00540 39.683 126 68 3 37 159 99 219 2.82e-20 94.0
MS.gene78908.t1 AT1G73410 44.037 109 58 2 35 142 2 108 3.31e-20 89.4
MS.gene78908.t1 AT3G29020 42.308 104 59 1 39 142 67 169 5.65e-20 91.3
MS.gene78908.t1 AT3G29020 42.308 104 59 1 39 142 65 167 7.08e-20 89.4
MS.gene78908.t1 AT5G40430 38.168 131 72 5 14 139 26 152 2.02e-18 85.5
MS.gene78908.t1 AT3G23250 54.545 66 30 0 84 149 2 67 2.84e-18 84.3
MS.gene78908.t1 AT2G37630 38.835 103 61 1 42 142 7 109 1.53e-17 85.1
MS.gene78908.t1 AT5G14750 54.386 57 26 0 84 140 2 58 2.09e-17 79.7
MS.gene78908.t1 AT5G14750 54.386 57 26 0 84 140 2 58 2.09e-17 79.7
MS.gene78908.t1 AT1G71030 50.769 65 32 0 76 140 5 69 4.18e-17 79.7
MS.gene78908.t1 AT1G71030 50.769 65 32 0 76 140 19 83 5.98e-17 79.7
MS.gene78908.t1 AT1G66380 48.718 78 40 0 37 114 8 85 1.43e-16 76.3
MS.gene78908.t1 AT2G02820 34.653 101 65 1 42 142 33 132 7.77e-15 77.4
MS.gene78908.t1 AT2G02820 34.653 101 65 1 42 142 33 132 1.07e-14 77.0
MS.gene78908.t1 AT2G02820 34.653 101 65 1 42 142 33 132 1.87e-14 75.1
MS.gene78908.t1 AT1G14350 34.653 101 65 1 42 142 28 127 3.38e-14 75.5
MS.gene78908.t1 AT1G14350 34.653 101 65 1 42 142 28 127 3.38e-14 75.5
MS.gene78908.t1 AT5G39700 38.000 100 61 1 40 139 57 155 4.82e-14 71.2
MS.gene78908.t1 AT5G59780 58.696 46 19 0 95 140 1 46 1.53e-13 69.3
MS.gene78908.t1 AT3G46130 58.696 46 19 0 95 140 1 46 2.22e-13 69.3
MS.gene78908.t1 AT4G25560 56.522 46 20 0 95 140 2 47 2.41e-12 67.0

Find 144 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCAAAATTGGGAAATAAA+TGG 0.160093 8.3:+55888790 MS.gene78908:CDS
CTAAATCAGTTTCTGGATAT+TGG 0.161358 8.3:-55889979 None:intergenic
TCTTCTCAGTATTGTAGTTT+TGG 0.185561 8.3:+55889698 MS.gene78908:CDS
CCACCAGTTCATACCGTTAA+TGG 0.187059 8.3:+55890355 MS.gene78908:CDS
ATCTGCTGAAGATGATATTT+TGG 0.211158 8.3:+55888599 MS.gene78908:CDS
AATGTCCCTTTCTTTAAATT+TGG 0.223698 8.3:-55888732 None:intergenic
TTGAACTCTTGACATAAAAT+TGG 0.232714 8.3:-55890168 None:intergenic
GCTTATAGCAATATGCTAAA+TGG 0.243066 8.3:+55889668 MS.gene78908:CDS
CAGCTACCTAAATCAGTTTC+TGG 0.252802 8.3:-55889986 None:intergenic
TTGTGAGCTTCATGCAAAAT+TGG 0.264653 8.3:+55888779 MS.gene78908:CDS
TTATCCATTTGATCATATTC+AGG 0.276026 8.3:+55889805 MS.gene78908:CDS
GATTGGTATGAGCAATGTTC+TGG 0.293988 8.3:+55890885 MS.gene78908:CDS
TATGATGAGGCGGATGAAAA+AGG 0.311703 8.3:+55888470 None:intergenic
CAATATCCAGAAACTGATTT+AGG 0.324968 8.3:+55889980 MS.gene78908:CDS
CCAAGTCAGGTAAGGGAGTT+TGG 0.325314 8.3:+55891008 MS.gene78908:CDS
AGATTCAACAATTCCATTCC+TGG 0.327490 8.3:+55889754 MS.gene78908:CDS
TGTTAATTCCATCGGTGCTT+TGG 0.351509 8.3:-55889520 None:intergenic
TCTGACTCCAGTGTACTAAT+TGG 0.355261 8.3:-55890070 None:intergenic
CTCCACTTCTATGCCTTTCG+AGG 0.370053 8.3:+55889943 MS.gene78908:CDS
TAGAGTATGTTGACCCGGTT+TGG 0.375248 8.3:+55890793 MS.gene78908:CDS
GACTATAAACACACGACTGC+TGG 0.385458 8.3:+55890975 MS.gene78908:CDS
TGTGAGCTTCATGCAAAATT+GGG 0.387917 8.3:+55888780 MS.gene78908:CDS
TTCTTTGGCTTGCAGTTACC+TGG 0.388817 8.3:+55889389 MS.gene78908:intron
TTGCTATAAGCAGAAATATC+AGG 0.394498 8.3:-55889656 None:intergenic
CCAAACTCCCTTACCTGACT+TGG 0.398941 8.3:-55891008 None:intergenic
ATAACGAGATAAAGAACTAT+TGG 0.400114 8.3:+55889420 MS.gene78908:CDS
TGCAAAATTGGGAAATAAAT+GGG 0.400398 8.3:+55888791 MS.gene78908:CDS
CATAGAAGATGGATTGGTTC+TGG 0.400612 8.3:-55890914 None:intergenic
GTGATTTGATTTCCACTGTC+AGG 0.408888 8.3:-55890819 None:intergenic
AGAGTCTGTTGCAATACTTC+AGG 0.410149 8.3:-55889491 None:intergenic
GATGTGCCAAATGGAGATAC+AGG 0.412162 8.3:-55890274 None:intergenic
AGTCGGCCAGATTTCTTGCT+TGG 0.413947 8.3:+55890858 MS.gene78908:CDS
GAACATGTATGAGACAGAAT+TGG 0.414325 8.3:+55890237 MS.gene78908:CDS
TATAAGTGGACACAATCATT+TGG 0.415326 8.3:+55889839 MS.gene78908:CDS
AGAAGAACGGAGAGGGGAAC+TGG 0.422920 8.3:+55888634 MS.gene78908:CDS
TGCTCGACGATGATCGGATT+GGG 0.425007 8.3:+55888508 MS.gene78908:CDS
GTATTGCAACAGACTCTTCA+TGG 0.426399 8.3:+55889497 MS.gene78908:CDS
CCACTGTCAGGGGTCCAAAC+CGG 0.428288 8.3:-55890807 None:intergenic
ATTTCTTGCTTGGTTCAGAT+TGG 0.430484 8.3:+55890868 MS.gene78908:CDS
CAGAAACTGATTTAGGTAGC+TGG 0.437233 8.3:+55889987 MS.gene78908:CDS
CTTCTGTTGGCACTAGCAGC+AGG 0.439873 8.3:-55890316 None:intergenic
CTTAGGCCAAATTTAAAGAA+AGG 0.444819 8.3:+55888726 MS.gene78908:CDS
GCTGACCCTGTATCTCCATT+TGG 0.449100 8.3:+55890268 MS.gene78908:CDS
TAAAAGGAACTAACCATTAA+CGG 0.449526 8.3:-55890368 None:intergenic
TGTTCTTCTCCACAGAATAG+TGG 0.452355 8.3:+55890094 MS.gene78908:CDS
CTTTCTTTAAATTTGGCCTA+AGG 0.453919 8.3:-55888725 None:intergenic
GTTTCTGGATATTGGATTGA+AGG 0.458346 8.3:-55889971 None:intergenic
TTCAGTTGTATCGACAGAAA+TGG 0.461960 8.3:+55889779 MS.gene78908:CDS
CTCGGATCAAGAGGCGTCAT+CGG 0.462308 8.3:+55889447 MS.gene78908:CDS
TCTGAACCAAGCAAGAAATC+TGG 0.462991 8.3:-55890864 None:intergenic
GTCTGTCAAGTATCTGATCT+TGG 0.466220 8.3:+55891059 MS.gene78908:CDS
TCATCCTGAATATGATCAAA+TGG 0.469570 8.3:-55889809 None:intergenic
CACTGTCAGGGGTCCAAACC+GGG 0.469781 8.3:-55890806 None:intergenic
AGGAGGGACCAGGATGATGA+AGG 0.471922 8.3:-55889874 None:intergenic
TTGAATCTCGAAAATGTTTG+TGG 0.472292 8.3:-55889739 None:intergenic
TAACCATTAACGGTATGAAC+TGG 0.477391 8.3:-55890358 None:intergenic
TTAGGCCAAATTTAAAGAAA+GGG 0.481231 8.3:+55888727 MS.gene78908:CDS
GGGAGTTTGGTTCTTGTGCA+TGG 0.482890 8.3:+55891021 MS.gene78908:CDS
TCGGATCAAGAGGCGTCATC+GGG 0.484822 8.3:+55889448 MS.gene78908:CDS
CGATGTAGCATCATAGAAGA+TGG 0.485495 8.3:-55890925 None:intergenic
ATCAAGAGGCGTCATCGGGC+TGG 0.485549 8.3:+55889452 MS.gene78908:CDS
GTCAATTATGTCAAGAAGAA+CGG 0.485968 8.3:+55888621 MS.gene78908:CDS
CTCATCCAGTGAACTTCTGT+TGG 0.486336 8.3:-55890329 None:intergenic
CTTCTAACCCAAGTCAGGTA+AGG 0.489516 8.3:+55891000 MS.gene78908:CDS
GTTGCCGCTGTTAATTCCAT+CGG 0.490339 8.3:-55889528 None:intergenic
CATGGAGTTCTTCTAAAGAA+AGG 0.491471 8.3:+55888567 MS.gene78908:CDS
ATGAGATGCTCGACGATGAT+CGG 0.492447 8.3:+55888502 MS.gene78908:CDS
CAACATAAGGTAACATTCCC+TGG 0.494845 8.3:-55889625 None:intergenic
TCAGGAAGCTCAGCAACATA+AGG 0.499412 8.3:-55889638 None:intergenic
TGATTTGATTTCCACTGTCA+GGG 0.499670 8.3:-55890818 None:intergenic
AATATTGAAGATGTGCCAAA+TGG 0.499766 8.3:-55890283 None:intergenic
AGAAACTGATTTAGGTAGCT+GGG 0.502016 8.3:+55889988 MS.gene78908:CDS
GAGTTGCCTGCTCTTTCACC+AGG 0.507824 8.3:-55890208 None:intergenic
ATTGGTATGAGCAATGTTCT+GGG 0.509168 8.3:+55890886 MS.gene78908:CDS
TGTCGATACAACTGAAATCC+AGG 0.512975 8.3:-55889772 None:intergenic
GGGAAATAAATGGGCACGCA+TGG 0.513252 8.3:+55888800 MS.gene78908:CDS
CAATCACCCCTTCATCATCC+TGG 0.516518 8.3:+55889866 MS.gene78908:CDS
GGAGGGACCAGGATGATGAA+GGG 0.520748 8.3:-55889873 None:intergenic
ATGGAGTTCTTCTAAAGAAA+GGG 0.525717 8.3:+55888568 MS.gene78908:CDS
GAGCTGTGAGAGGAGGGACC+AGG 0.527604 8.3:-55889884 None:intergenic
ATGCTCGACGATGATCGGAT+TGG 0.527641 8.3:+55888507 MS.gene78908:CDS
AGCAGTCGTGTGTTTATAGT+CGG 0.530421 8.3:-55890973 None:intergenic
TGGAACTTCTAACCCAAGTC+AGG 0.531973 8.3:+55890995 MS.gene78908:CDS
TAGCATCATAGAAGATGGAT+TGG 0.535010 8.3:-55890920 None:intergenic
GATAAAGTACAGATTGTAGC+AGG 0.539787 8.3:-55890117 None:intergenic
CTTTCTTTAGAAGAACTCCA+TGG 0.542317 8.3:-55888566 None:intergenic
TGCGGTGGGCTAATCACCTT+AGG 0.543941 8.3:+55888709 MS.gene78908:CDS
CAAACTCCCTTACCTGACTT+GGG 0.545081 8.3:-55891007 None:intergenic
GACTCAAGTAAAGGAGGTGG+GGG 0.545216 8.3:-55890019 None:intergenic
TATGTCAAGAAGAACGGAGA+GGG 0.547178 8.3:+55888627 MS.gene78908:CDS
TGACTGTATGAAGGATAACC+AGG 0.548074 8.3:+55889607 MS.gene78908:CDS
TGGGTCAGAGTTTAATGATG+AGG 0.548932 8.3:+55888527 MS.gene78908:CDS
AATGCTGTTCAGAAGCAGAC+AGG 0.553023 8.3:+55888657 MS.gene78908:CDS
CGTCTCTGTTGAAGTTTAGT+CGG 0.553906 8.3:+55890841 MS.gene78908:CDS
CTTCATGGCCAAAGCACCGA+TGG 0.554645 8.3:+55889512 MS.gene78908:CDS
TCATCAACTGACTCAAGTAA+AGG 0.554711 8.3:-55890028 None:intergenic
AGGGACATTTACTGCAGAAG+AGG 0.563568 8.3:+55888746 MS.gene78908:CDS
CACATTGAGCTGTGAGAGGA+GGG 0.567914 8.3:-55889890 None:intergenic
TCCTACACCAATTAGTACAC+TGG 0.573683 8.3:+55890063 MS.gene78908:CDS
TTCTTCTAAAGAAAGGGCCA+TGG 0.575938 8.3:+55888574 MS.gene78908:CDS
AATTCATCTACTGCAACTCC+TGG 0.580591 8.3:+55890190 MS.gene78908:CDS
TGACTCAAGTAAAGGAGGTG+GGG 0.580735 8.3:-55890020 None:intergenic
TCAGATACTTGACAGACAGC+AGG 0.582056 8.3:-55891053 None:intergenic
GCAACTCCTGGTGAAAGAGC+AGG 0.583781 8.3:+55890202 MS.gene78908:CDS
CTGACTCAAGTAAAGGAGGT+GGG 0.584625 8.3:-55890021 None:intergenic
TTTCTTTAGAAGAACTCCAT+GGG 0.586422 8.3:-55888565 None:intergenic
TAGTGCCAACAGAAGTTCAC+TGG 0.586743 8.3:+55890324 MS.gene78908:CDS
AATACTTCAGGAGGATAAAG+TGG 0.587179 8.3:-55889479 None:intergenic
CCATTAACGGTATGAACTGG+TGG 0.588065 8.3:-55890355 None:intergenic
TTCTAACCCAAGTCAGGTAA+GGG 0.592909 8.3:+55891001 MS.gene78908:CDS
ACTGACTCAAGTAAAGGAGG+TGG 0.593168 8.3:-55890022 None:intergenic
CCCATATAATATATATGATG+AGG 0.594142 8.3:+55888457 None:intergenic
GATTTGATTTCCACTGTCAG+GGG 0.598558 8.3:-55890817 None:intergenic
TGCAATATATGACTGTATGA+AGG 0.599886 8.3:+55889598 MS.gene78908:CDS
ATCTCGTTATCTGTACGACC+AGG 0.601400 8.3:-55889407 None:intergenic
TAAAGAACTATTGGAACACT+CGG 0.601850 8.3:+55889429 MS.gene78908:CDS
GAGGGACCAGGATGATGAAG+GGG 0.602166 8.3:-55889872 None:intergenic
CTCGAAAGGCATAGAAGTGG+AGG 0.606962 8.3:-55889942 None:intergenic
ATTGGAACACTCGGATCAAG+AGG 0.609258 8.3:+55889438 MS.gene78908:CDS
GAGTATGACAGAAGTGCCCA+TGG 0.609546 8.3:+55888549 MS.gene78908:CDS
TCATCTTCAGCAGATGTCCA+TGG 0.609589 8.3:-55888591 None:intergenic
GAAACTAGAGTATGTTGACC+CGG 0.610281 8.3:+55890788 MS.gene78908:CDS
ATACAACTGAAATCCAGGAA+TGG 0.613322 8.3:-55889767 None:intergenic
GTCTGTTGCAATACTTCAGG+AGG 0.614331 8.3:-55889488 None:intergenic
CTCCTCGAAAGGCATAGAAG+TGG 0.615574 8.3:-55889945 None:intergenic
ACACATTGAGCTGTGAGAGG+AGG 0.617974 8.3:-55889891 None:intergenic
AGTCGTGTGTTTATAGTCGG+TGG 0.618753 8.3:-55890970 None:intergenic
TTCTGTTGGCACTAGCAGCA+GGG 0.625332 8.3:-55890315 None:intergenic
GAACTGCTTGGAGTCTTCCG+CGG 0.631803 8.3:-55890139 None:intergenic
ATTGAAGGAAGCTCCTCGAA+AGG 0.632798 8.3:-55889956 None:intergenic
ATATAATATATATGATGAGG+CGG 0.633939 8.3:+55888460 None:intergenic
TCAACTGACTCAAGTAAAGG+AGG 0.638905 8.3:-55890025 None:intergenic
TGTAGCAGGCCACTATTCTG+TGG 0.643678 8.3:-55890103 None:intergenic
CCGGTTTGGACCCCTGACAG+TGG 0.643685 8.3:+55890807 MS.gene78908:CDS
GTAACACATTGAGCTGTGAG+AGG 0.644056 8.3:-55889894 None:intergenic
CAGACAGGCCTGCTACGTTG+CGG 0.646255 8.3:+55888672 MS.gene78908:CDS
TACAATCTGTACTTTATCCG+CGG 0.647061 8.3:+55890122 MS.gene78908:CDS
ATGTCAAGAAGAACGGAGAG+GGG 0.658303 8.3:+55888628 MS.gene78908:CDS
TCCAGTGTACTAATTGGTGT+AGG 0.660576 8.3:-55890064 None:intergenic
GAAACTGATTTAGGTAGCTG+GGG 0.664267 8.3:+55889989 MS.gene78908:CDS
GACTGTATGAAGGATAACCA+GGG 0.687260 8.3:+55889608 MS.gene78908:CDS
ATGTGCCAAATGGAGATACA+GGG 0.688223 8.3:-55890273 None:intergenic
AGCACCGATGGAATTAACAG+CGG 0.704814 8.3:+55889524 MS.gene78908:CDS
TTATGTCAAGAAGAACGGAG+AGG 0.744167 8.3:+55888626 MS.gene78908:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAACATTATTTTGAAATT+TGG - chr8.3:55890532-55890551 None:intergenic 10.0%
!!! TTTATTTTTTATGATAAAGT+TGG + chr8.3:55890673-55890692 MS.gene78908:intron 10.0%
!!! TTTTAAATTCTCTAAAAATA+TGG + chr8.3:55888999-55889018 MS.gene78908:intron 10.0%
!! AAAATATTGTAAGTACAAAA+TGG - chr8.3:55889335-55889354 None:intergenic 15.0%
!! AAATGAATTAAGGAATTAAT+GGG - chr8.3:55890754-55890773 None:intergenic 15.0%
!! AATTTAAAAAAGAAGTCATT+AGG - chr8.3:55888988-55889007 None:intergenic 15.0%
!!! ATTTTCTTTATCTATTAAAG+TGG + chr8.3:55889361-55889380 MS.gene78908:intron 15.0%
!! CAAATGAATTAAGGAATTAA+TGG - chr8.3:55890755-55890774 None:intergenic 20.0%
!!! AATTTCCATTTTTTAGTGAA+TGG - chr8.3:55889922-55889941 None:intergenic 20.0%
!!! ATTAAAGTGGTTTATTTCTT+TGG + chr8.3:55889374-55889393 MS.gene78908:intron 20.0%
! AATGGGAAAAATCTTAAACA+TGG - chr8.3:55890737-55890756 None:intergenic 25.0%
! AATGTCCCTTTCTTTAAATT+TGG - chr8.3:55888735-55888754 None:intergenic 25.0%
! AATTCAATTCTTATACACAG+TGG - chr8.3:55889190-55889209 None:intergenic 25.0%
! ATAACGAGATAAAGAACTAT+TGG + chr8.3:55889420-55889439 MS.gene78908:CDS 25.0%
! ATACTACAACTAAATATGCA+AGG - chr8.3:55888863-55888882 None:intergenic 25.0%
! ATGCAAAATTGGGAAATAAA+TGG + chr8.3:55888790-55888809 MS.gene78908:CDS 25.0%
! ATTCAATTCTTATACACAGT+GGG - chr8.3:55889189-55889208 None:intergenic 25.0%
! CTGATAATCTTTCATTATCT+TGG + chr8.3:55890464-55890483 MS.gene78908:intron 25.0%
! TAAAAGGAACTAACCATTAA+CGG - chr8.3:55890371-55890390 None:intergenic 25.0%
! TAATTCCTTAATTCATTTGC+AGG + chr8.3:55890756-55890775 MS.gene78908:intron 25.0%
! TGCAAAATTGGGAAATAAAT+GGG + chr8.3:55888791-55888810 MS.gene78908:CDS 25.0%
! TGTTAATTAAATGCTGTGTA+TGG + chr8.3:55889057-55889076 MS.gene78908:intron 25.0%
! TTAAAAAAGAAGTCATTAGG+TGG - chr8.3:55888985-55889004 None:intergenic 25.0%
! TTAAACAACAAACTACACAT+AGG - chr8.3:55890502-55890521 None:intergenic 25.0%
! TTAGGCCAAATTTAAAGAAA+GGG + chr8.3:55888727-55888746 MS.gene78908:CDS 25.0%
! TTATCCATTTGATCATATTC+AGG + chr8.3:55889805-55889824 MS.gene78908:CDS 25.0%
! TTGAACTCTTGACATAAAAT+TGG - chr8.3:55890171-55890190 None:intergenic 25.0%
!! GATTTTCAAAAAACTGATCA+AGG - chr8.3:55890715-55890734 None:intergenic 25.0%
!! GTAGTATTTATTGTTTCTTC+AGG + chr8.3:55888876-55888895 MS.gene78908:intron 25.0%
!! TTAAAGCGTTCTATAGAAAA+AGG + chr8.3:55890548-55890567 MS.gene78908:intron 25.0%
!! TTCACAGGATTTTATAATTG+TGG + chr8.3:55889293-55889312 MS.gene78908:intron 25.0%
!!! AGGATGATACTTTTTATAAG+TGG + chr8.3:55889825-55889844 MS.gene78908:CDS 25.0%
!!! GAGACGGTTAAATATTTTTA+TGG - chr8.3:55890623-55890642 None:intergenic 25.0%
AAAAATATTTAACCGTCTCC+TGG + chr8.3:55890624-55890643 MS.gene78908:intron 30.0%
AAACTGATCAAGGAATATGT+TGG - chr8.3:55890705-55890724 None:intergenic 30.0%
AACTGATCAAGGAATATGTT+GGG - chr8.3:55890704-55890723 None:intergenic 30.0%
AATATTGAAGATGTGCCAAA+TGG - chr8.3:55890286-55890305 None:intergenic 30.0%
ACATAATGATGGCATACTAA+TGG - chr8.3:55888934-55888953 None:intergenic 30.0%
ATACAAGGAAGACATAATGA+TGG - chr8.3:55888945-55888964 None:intergenic 30.0%
ATTAAATGCTGTGTATGGTT+TGG + chr8.3:55889062-55889081 MS.gene78908:intron 30.0%
CACTTGTTTATATGTGTCTT+TGG + chr8.3:55890435-55890454 MS.gene78908:intron 30.0%
CTTAGGCCAAATTTAAAGAA+AGG + chr8.3:55888726-55888745 MS.gene78908:CDS 30.0%
CTTTCTTTAAATTTGGCCTA+AGG - chr8.3:55888728-55888747 None:intergenic 30.0%
GCTTATAGCAATATGCTAAA+TGG + chr8.3:55889668-55889687 MS.gene78908:CDS 30.0%
GTCAATTATGTCAAGAAGAA+CGG + chr8.3:55888621-55888640 MS.gene78908:CDS 30.0%
TAAAGAACTATTGGAACACT+CGG + chr8.3:55889429-55889448 MS.gene78908:CDS 30.0%
TACAGCCATTCACTAAAAAA+TGG + chr8.3:55889914-55889933 MS.gene78908:CDS 30.0%
TATAAGTGGACACAATCATT+TGG + chr8.3:55889839-55889858 MS.gene78908:CDS 30.0%
TCATCCTGAATATGATCAAA+TGG - chr8.3:55889812-55889831 None:intergenic 30.0%
TGCAATATATGACTGTATGA+AGG + chr8.3:55889598-55889617 MS.gene78908:CDS 30.0%
TTAAATGCTGTGTATGGTTT+GGG + chr8.3:55889063-55889082 MS.gene78908:intron 30.0%
TTGAATCTCGAAAATGTTTG+TGG - chr8.3:55889742-55889761 None:intergenic 30.0%
TTGCTATAAGCAGAAATATC+AGG - chr8.3:55889659-55889678 None:intergenic 30.0%
! ATCTGCTGAAGATGATATTT+TGG + chr8.3:55888599-55888618 MS.gene78908:CDS 30.0%
! ATGGAGTTCTTCTAAAGAAA+GGG + chr8.3:55888568-55888587 MS.gene78908:CDS 30.0%
! CAATATCCAGAAACTGATTT+AGG + chr8.3:55889980-55889999 MS.gene78908:CDS 30.0%
! CTAAATCAGTTTCTGGATAT+TGG - chr8.3:55889982-55890001 None:intergenic 30.0%
! CTTCTCAGTATTGTAGTTTT+GGG + chr8.3:55889699-55889718 MS.gene78908:CDS 30.0%
! TCTTCTCAGTATTGTAGTTT+TGG + chr8.3:55889698-55889717 MS.gene78908:CDS 30.0%
! TTCTTTTTCTGCAAGAAATC+AGG - chr8.3:55889563-55889582 None:intergenic 30.0%
! TTTCTTTAGAAGAACTCCAT+GGG - chr8.3:55888568-55888587 None:intergenic 30.0%
!! ACATAAGTATTGAGATTCAC+AGG + chr8.3:55889278-55889297 MS.gene78908:intron 30.0%
!!! AATTGGTTTTTTGAACTGCT+TGG - chr8.3:55890154-55890173 None:intergenic 30.0%
AATACTTCAGGAGGATAAAG+TGG - chr8.3:55889482-55889501 None:intergenic 35.0%
AGATTCAACAATTCCATTCC+TGG + chr8.3:55889754-55889773 MS.gene78908:CDS 35.0%
ATACAACTGAAATCCAGGAA+TGG - chr8.3:55889770-55889789 None:intergenic 35.0%
ATTGGTATGAGCAATGTTCT+GGG + chr8.3:55890886-55890905 MS.gene78908:CDS 35.0%
ATTTCTTGCTTGGTTCAGAT+TGG + chr8.3:55890868-55890887 MS.gene78908:CDS 35.0%
CCATCATATCACATGCTAAA+AGG - chr8.3:55890387-55890406 None:intergenic 35.0%
GAACATGTATGAGACAGAAT+TGG + chr8.3:55890237-55890256 MS.gene78908:CDS 35.0%
GATAAAGTACAGATTGTAGC+AGG - chr8.3:55890120-55890139 None:intergenic 35.0%
GCATACTAATGGAGAATGAA+TGG - chr8.3:55888923-55888942 None:intergenic 35.0%
GTTCCTTACTGCAAAATACA+AGG - chr8.3:55888960-55888979 None:intergenic 35.0%
TAACCATTAACGGTATGAAC+TGG - chr8.3:55890361-55890380 None:intergenic 35.0%
TACAATCTGTACTTTATCCG+CGG + chr8.3:55890122-55890141 MS.gene78908:CDS 35.0%
TAGCATCATAGAAGATGGAT+TGG - chr8.3:55890923-55890942 None:intergenic 35.0%
TCTTCTCAAAATTATCAGCC+AGG - chr8.3:55890645-55890664 None:intergenic 35.0%
TGTGAGCTTCATGCAAAATT+GGG + chr8.3:55888780-55888799 MS.gene78908:CDS 35.0%
TGTTGCCTGCAAATGAATTA+AGG - chr8.3:55890764-55890783 None:intergenic 35.0%
TTGTGAGCTTCATGCAAAAT+TGG + chr8.3:55888779-55888798 MS.gene78908:CDS 35.0%
! AGAAACTGATTTAGGTAGCT+GGG + chr8.3:55889988-55890007 MS.gene78908:CDS 35.0%
! CATGGAGTTCTTCTAAAGAA+AGG + chr8.3:55888567-55888586 MS.gene78908:CDS 35.0%
! CCTTTTAGCATGTGATATGA+TGG + chr8.3:55890384-55890403 MS.gene78908:intron 35.0%
! CTTCCTTGTATTTTGCAGTA+AGG + chr8.3:55888954-55888973 MS.gene78908:intron 35.0%
! CTTTCTTTAGAAGAACTCCA+TGG - chr8.3:55888569-55888588 None:intergenic 35.0%
! GTTTCTGGATATTGGATTGA+AGG - chr8.3:55889974-55889993 None:intergenic 35.0%
! TCATCAACTGACTCAAGTAA+AGG - chr8.3:55890031-55890050 None:intergenic 35.0%
! TGATTTGATTTCCACTGTCA+GGG - chr8.3:55890821-55890840 None:intergenic 35.0%
! TTCAGTTGTATCGACAGAAA+TGG + chr8.3:55889779-55889798 MS.gene78908:CDS 35.0%
!! ATGAAGAGCTTTAAATGTCG+TGG + chr8.3:55889241-55889260 MS.gene78908:intron 35.0%
AATTCATCTACTGCAACTCC+TGG + chr8.3:55890190-55890209 MS.gene78908:CDS 40.0%
AGAGTCTGTTGCAATACTTC+AGG - chr8.3:55889494-55889513 None:intergenic 40.0%
AGCAGTCGTGTGTTTATAGT+CGG - chr8.3:55890976-55890995 None:intergenic 40.0%
ATGTGCCAAATGGAGATACA+GGG - chr8.3:55890276-55890295 None:intergenic 40.0%
CAAAATTATCAGCCAGGAGA+CGG - chr8.3:55890639-55890658 None:intergenic 40.0%
CAACATAAGGTAACATTCCC+TGG - chr8.3:55889628-55889647 None:intergenic 40.0%
CAGCTACCTAAATCAGTTTC+TGG - chr8.3:55889989-55890008 None:intergenic 40.0%
CGATGTAGCATCATAGAAGA+TGG - chr8.3:55890928-55890947 None:intergenic 40.0%
CGTCTCTGTTGAAGTTTAGT+CGG + chr8.3:55890841-55890860 MS.gene78908:CDS 40.0%
GAAACTAGAGTATGTTGACC+CGG + chr8.3:55890788-55890807 MS.gene78908:CDS 40.0%
GACTGTATGAAGGATAACCA+GGG + chr8.3:55889608-55889627 MS.gene78908:CDS 40.0%
GAGATTCACACTAACAGATG+TGG + chr8.3:55889114-55889133 MS.gene78908:intron 40.0%
GATTGGTATGAGCAATGTTC+TGG + chr8.3:55890885-55890904 MS.gene78908:CDS 40.0%
GTATTGCAACAGACTCTTCA+TGG + chr8.3:55889497-55889516 MS.gene78908:CDS 40.0%
GTCTGTCAAGTATCTGATCT+TGG + chr8.3:55891059-55891078 MS.gene78908:CDS 40.0%
TATGTCAAGAAGAACGGAGA+GGG + chr8.3:55888627-55888646 MS.gene78908:CDS 40.0%
TCCAGTGTACTAATTGGTGT+AGG - chr8.3:55890067-55890086 None:intergenic 40.0%
TCCTACACCAATTAGTACAC+TGG + chr8.3:55890063-55890082 MS.gene78908:CDS 40.0%
TCTGAACCAAGCAAGAAATC+TGG - chr8.3:55890867-55890886 None:intergenic 40.0%
TCTGACTCCAGTGTACTAAT+TGG - chr8.3:55890073-55890092 None:intergenic 40.0%
TGACTGTATGAAGGATAACC+AGG + chr8.3:55889607-55889626 MS.gene78908:CDS 40.0%
TGGGTCAGAGTTTAATGATG+AGG + chr8.3:55888527-55888546 MS.gene78908:CDS 40.0%
TGTCGATACAACTGAAATCC+AGG - chr8.3:55889775-55889794 None:intergenic 40.0%
TGTTCTTCTCCACAGAATAG+TGG + chr8.3:55890094-55890113 MS.gene78908:CDS 40.0%
TTATGTCAAGAAGAACGGAG+AGG + chr8.3:55888626-55888645 MS.gene78908:CDS 40.0%
TTCACACTAACAGATGTGGT+AGG + chr8.3:55889118-55889137 MS.gene78908:intron 40.0%
TTCTAACCCAAGTCAGGTAA+GGG + chr8.3:55891001-55891020 MS.gene78908:CDS 40.0%
! AAAAAGTTGTCGATTGCGGT+GGG + chr8.3:55888695-55888714 MS.gene78908:CDS 40.0%
! ATGGTTTGGGATATCCTAGT+AGG + chr8.3:55889076-55889095 MS.gene78908:intron 40.0%
! CAGAAACTGATTTAGGTAGC+TGG + chr8.3:55889987-55890006 MS.gene78908:CDS 40.0%
! GAAACTGATTTAGGTAGCTG+GGG + chr8.3:55889989-55890008 MS.gene78908:CDS 40.0%
! GATTTGATTTCCACTGTCAG+GGG - chr8.3:55890820-55890839 None:intergenic 40.0%
! GTGATTTGATTTCCACTGTC+AGG - chr8.3:55890822-55890841 None:intergenic 40.0%
! TCAACTGACTCAAGTAAAGG+AGG - chr8.3:55890028-55890047 None:intergenic 40.0%
! TGTTAATTCCATCGGTGCTT+TGG - chr8.3:55889523-55889542 None:intergenic 40.0%
! TTCTTCTAAAGAAAGGGCCA+TGG + chr8.3:55888574-55888593 MS.gene78908:CDS 40.0%
!! CATAGAAGATGGATTGGTTC+TGG - chr8.3:55890917-55890936 None:intergenic 40.0%
AATGCTGTTCAGAAGCAGAC+AGG + chr8.3:55888657-55888676 MS.gene78908:CDS 45.0%
ACGTCATCTTATCGCCTACT+AGG - chr8.3:55889093-55889112 None:intergenic 45.0%
AGGGACATTTACTGCAGAAG+AGG + chr8.3:55888746-55888765 MS.gene78908:CDS 45.0%
AGTCGTGTGTTTATAGTCGG+TGG - chr8.3:55890973-55890992 None:intergenic 45.0%
AGTGGGTGACGTTATGCATT+AGG - chr8.3:55889172-55889191 None:intergenic 45.0%
ATCTCGTTATCTGTACGACC+AGG - chr8.3:55889410-55889429 None:intergenic 45.0%
ATGAGATGCTCGACGATGAT+CGG + chr8.3:55888502-55888521 MS.gene78908:CDS 45.0%
ATGTCAAGAAGAACGGAGAG+GGG + chr8.3:55888628-55888647 MS.gene78908:CDS 45.0%
ATTGAAGGAAGCTCCTCGAA+AGG - chr8.3:55889959-55889978 None:intergenic 45.0%
ATTGGAACACTCGGATCAAG+AGG + chr8.3:55889438-55889457 MS.gene78908:CDS 45.0%
CAAACTCCCTTACCTGACTT+GGG - chr8.3:55891010-55891029 None:intergenic 45.0%
CCACCAGTTCATACCGTTAA+TGG + chr8.3:55890355-55890374 MS.gene78908:CDS 45.0%
CCATTAACGGTATGAACTGG+TGG - chr8.3:55890358-55890377 None:intergenic 45.0%
CTCATCCAGTGAACTTCTGT+TGG - chr8.3:55890332-55890351 None:intergenic 45.0%
CTGACTCAAGTAAAGGAGGT+GGG - chr8.3:55890024-55890043 None:intergenic 45.0%
CTTCTAACCCAAGTCAGGTA+AGG + chr8.3:55891000-55891019 MS.gene78908:CDS 45.0%
GACTATAAACACACGACTGC+TGG + chr8.3:55890975-55890994 MS.gene78908:CDS 45.0%
GATGTGCCAAATGGAGATAC+AGG - chr8.3:55890277-55890296 None:intergenic 45.0%
GCGGATGAAAAAGGAGATTG+AGG + chr8.3:55888479-55888498 MS.gene78908:CDS 45.0%
GTAACACATTGAGCTGTGAG+AGG - chr8.3:55889897-55889916 None:intergenic 45.0%
GTCTGTTGCAATACTTCAGG+AGG - chr8.3:55889491-55889510 None:intergenic 45.0%
GTTGCCGCTGTTAATTCCAT+CGG - chr8.3:55889531-55889550 None:intergenic 45.0%
TAGAGTATGTTGACCCGGTT+TGG + chr8.3:55890793-55890812 MS.gene78908:CDS 45.0%
TAGTGCCAACAGAAGTTCAC+TGG + chr8.3:55890324-55890343 MS.gene78908:CDS 45.0%
TCAGATACTTGACAGACAGC+AGG - chr8.3:55891056-55891075 None:intergenic 45.0%
TCAGGAAGCTCAGCAACATA+AGG - chr8.3:55889641-55889660 None:intergenic 45.0%
TCATCTTCAGCAGATGTCCA+TGG - chr8.3:55888594-55888613 None:intergenic 45.0%
TGACTCAAGTAAAGGAGGTG+GGG - chr8.3:55890023-55890042 None:intergenic 45.0%
TGGAACTTCTAACCCAAGTC+AGG + chr8.3:55890995-55891014 MS.gene78908:CDS 45.0%
! ACTGACTCAAGTAAAGGAGG+TGG - chr8.3:55890025-55890044 None:intergenic 45.0%
! GAAAAAGTTGTCGATTGCGG+TGG + chr8.3:55888694-55888713 MS.gene78908:CDS 45.0%
! GCGGAAAAAGTTGTCGATTG+CGG + chr8.3:55888691-55888710 MS.gene78908:CDS 45.0%
!! AACTTTTTCCGCAACGTAGC+AGG - chr8.3:55888683-55888702 None:intergenic 45.0%
!! AGCACCGATGGAATTAACAG+CGG + chr8.3:55889524-55889543 MS.gene78908:CDS 45.0%
!! TTCTTTGGCTTGCAGTTACC+TGG + chr8.3:55889389-55889408 MS.gene78908:intron 45.0%
ACACATTGAGCTGTGAGAGG+AGG - chr8.3:55889894-55889913 None:intergenic 50.0%
AGTCGGCCAGATTTCTTGCT+TGG + chr8.3:55890858-55890877 MS.gene78908:CDS 50.0%
ATGCTCGACGATGATCGGAT+TGG + chr8.3:55888507-55888526 MS.gene78908:CDS 50.0%
CAATCACCCCTTCATCATCC+TGG + chr8.3:55889866-55889885 MS.gene78908:CDS 50.0%
CACATTGAGCTGTGAGAGGA+GGG - chr8.3:55889893-55889912 None:intergenic 50.0%
CCAAACTCCCTTACCTGACT+TGG - chr8.3:55891011-55891030 None:intergenic 50.0%
CCAAGTCAGGTAAGGGAGTT+TGG + chr8.3:55891008-55891027 MS.gene78908:CDS 50.0%
CTCCACTTCTATGCCTTTCG+AGG + chr8.3:55889943-55889962 MS.gene78908:CDS 50.0%
GACTCAAGTAAAGGAGGTGG+GGG - chr8.3:55890022-55890041 None:intergenic 50.0%
GCTGACCCTGTATCTCCATT+TGG + chr8.3:55890268-55890287 MS.gene78908:CDS 50.0%
GGGAAATAAATGGGCACGCA+TGG + chr8.3:55888800-55888819 MS.gene78908:CDS 50.0%
TGCTCGACGATGATCGGATT+GGG + chr8.3:55888508-55888527 MS.gene78908:CDS 50.0%
TGTAGCAGGCCACTATTCTG+TGG - chr8.3:55890106-55890125 None:intergenic 50.0%
TTCTGTTGGCACTAGCAGCA+GGG - chr8.3:55890318-55890337 None:intergenic 50.0%
! CTCCTCGAAAGGCATAGAAG+TGG - chr8.3:55889948-55889967 None:intergenic 50.0%
! CTCGAAAGGCATAGAAGTGG+AGG - chr8.3:55889945-55889964 None:intergenic 50.0%
!! GAGTATGACAGAAGTGCCCA+TGG + chr8.3:55888549-55888568 MS.gene78908:CDS 50.0%
!! GGGAGTTTGGTTCTTGTGCA+TGG + chr8.3:55891021-55891040 MS.gene78908:CDS 50.0%
AGAAGAACGGAGAGGGGAAC+TGG + chr8.3:55888634-55888653 MS.gene78908:CDS 55.0%
AGGAGGGACCAGGATGATGA+AGG - chr8.3:55889877-55889896 None:intergenic 55.0%
CTTCTGTTGGCACTAGCAGC+AGG - chr8.3:55890319-55890338 None:intergenic 55.0%
GAACTGCTTGGAGTCTTCCG+CGG - chr8.3:55890142-55890161 None:intergenic 55.0%
GAGGGACCAGGATGATGAAG+GGG - chr8.3:55889875-55889894 None:intergenic 55.0%
GAGTTGCCTGCTCTTTCACC+AGG - chr8.3:55890211-55890230 None:intergenic 55.0%
GCAACTCCTGGTGAAAGAGC+AGG + chr8.3:55890202-55890221 MS.gene78908:CDS 55.0%
GGAGGGACCAGGATGATGAA+GGG - chr8.3:55889876-55889895 None:intergenic 55.0%
!! CTCGGATCAAGAGGCGTCAT+CGG + chr8.3:55889447-55889466 MS.gene78908:CDS 55.0%
!! CTTCATGGCCAAAGCACCGA+TGG + chr8.3:55889512-55889531 MS.gene78908:CDS 55.0%
!! TCGGATCAAGAGGCGTCATC+GGG + chr8.3:55889448-55889467 MS.gene78908:CDS 55.0%
!! TGCGGTGGGCTAATCACCTT+AGG + chr8.3:55888709-55888728 MS.gene78908:CDS 55.0%
CACTGTCAGGGGTCCAAACC+GGG - chr8.3:55890809-55890828 None:intergenic 60.0%
CAGACAGGCCTGCTACGTTG+CGG + chr8.3:55888672-55888691 MS.gene78908:CDS 60.0%
CCACTGTCAGGGGTCCAAAC+CGG - chr8.3:55890810-55890829 None:intergenic 60.0%
!! ATCAAGAGGCGTCATCGGGC+TGG + chr8.3:55889452-55889471 MS.gene78908:CDS 60.0%
GAGCTGTGAGAGGAGGGACC+AGG - chr8.3:55889887-55889906 None:intergenic 65.0%
!! CCGGTTTGGACCCCTGACAG+TGG + chr8.3:55890807-55890826 MS.gene78908:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 55888471 55891085 55888471 ID=MS.gene78908
chr8.3 mRNA 55888471 55891085 55888471 ID=MS.gene78908.t1;Parent=MS.gene78908
chr8.3 exon 55888471 55888830 55888471 ID=MS.gene78908.t1.exon1;Parent=MS.gene78908.t1
chr8.3 CDS 55888471 55888830 55888471 ID=cds.MS.gene78908.t1;Parent=MS.gene78908.t1
chr8.3 exon 55889404 55890376 55889404 ID=MS.gene78908.t1.exon2;Parent=MS.gene78908.t1
chr8.3 CDS 55889404 55890376 55889404 ID=cds.MS.gene78908.t1;Parent=MS.gene78908.t1
chr8.3 exon 55890778 55891085 55890778 ID=MS.gene78908.t1.exon3;Parent=MS.gene78908.t1
chr8.3 CDS 55890778 55891085 55890778 ID=cds.MS.gene78908.t1;Parent=MS.gene78908.t1
Gene Sequence

>MS.gene78908

ATGATGAGGCGGATGAAAAAGGAGATTGAGGATGAGATGCTCGACGATGATCGGATTGGGTCAGAGTTTAATGATGAGGAGTATGACAGAAGTGCCCATGGAGTTCTTCTAAAGAAAGGGCCATGGACATCTGCTGAAGATGATATTTTGGTCAATTATGTCAAGAAGAACGGAGAGGGGAACTGGAATGCTGTTCAGAAGCAGACAGGCCTGCTACGTTGCGGAAAAAGTTGTCGATTGCGGTGGGCTAATCACCTTAGGCCAAATTTAAAGAAAGGGACATTTACTGCAGAAGAGGAGCAGTTGATTTGTGAGCTTCATGCAAAATTGGGAAATAAATGGGCACGCATGGCAGCACATGTAAGCATATTGTGTATTGTTTCTCTTTGCCTTGCATATTTAGTTGTAGTATTTATTGTTTCTTCAGGTTTTACTGCAATCTTTGAATTCCATTCATTCTCCATTAGTATGCCATCATTATGTCTTCCTTGTATTTTGCAGTAAGGAACTTCCACCTAATGACTTCTTTTTTAAATTCTCTAAAAATATGGAGCAAGCTAGTTAGATTTGTGTATTCAATAAAGAATGTTAATTAAATGCTGTGTATGGTTTGGGATATCCTAGTAGGCGATAAGATGACGTAGAGATTCACACTAACAGATGTGGTAGGATAATGTTCACTTGTCTTTTGTTAGATTCCTAATGCATAACGTCACCCACTGTGTATAAGAATTGAATTCTAAAATTATATTTCTGTCAACTTTTACGCAATGAAGAGCTTTAAATGTCGTGGTACTTATGATTAAAACATAAGTATTGAGATTCACAGGATTTTATAATTGTGGCAATCAGTAATTTCTTCCATTTTGTACTTACAATATTTTGTGCTTATTTTCTTTATCTATTAAAGTGGTTTATTTCTTTGGCTTGCAGTTACCTGGTCGTACAGATAACGAGATAAAGAACTATTGGAACACTCGGATCAAGAGGCGTCATCGGGCTGGCTTGCCACTTTATCCTCCTGAAGTATTGCAACAGACTCTTCATGGCCAAAGCACCGATGGAATTAACAGCGGCAACAAAGTGCATCCTGATTTCTTGCAGAAAAAGAATTTTGATATACATGATGCAATATATGACTGTATGAAGGATAACCAGGGAATGTTACCTTATGTTGCTGAGCTTCCTGATATTTCTGCTTATAGCAATATGCTAAATGGTTTTGATTCTTCTCAGTATTGTAGTTTTGGGCAATCAACATCATCTAACCACAAACATTTTCGAGATTCAACAATTCCATTCCTGGATTTCAGTTGTATCGACAGAAATGGTTATTATCCATTTGATCATATTCAGGATGATACTTTTTATAAGTGGACACAATCATTTGGCATGCAATCACCCCTTCATCATCCTGGTCCCTCCTCTCACAGCTCAATGTGTTACAGCCATTCACTAAAAAATGGAAATTCCTCCACTTCTATGCCTTTCGAGGAGCTTCCTTCAATCCAATATCCAGAAACTGATTTAGGTAGCTGGGGCACATCTCCCCCACCTCCTTTACTTGAGTCAGTTGATGATTTCATTAAGTCTCCTACACCAATTAGTACACTGGAGTCAGATTGTTCTTCTCCACAGAATAGTGGCCTGCTACAATCTGTACTTTATCCGCGGAAGACTCCAAGCAGTTCAAAAAACCAATTTTATGTCAAGAGTTCAAATTCATCTACTGCAACTCCTGGTGAAAGAGCAGGCAACTCTGCTTTGAACATGTATGAGACAGAATTGGAAGAATGTGCTGACCCTGTATCTCCATTTGGCACATCTTCAATATTGAACGAGTGCCCTGCTGCTAGTGCCAACAGAAGTTCACTGGATGAGCAGCCACCAGTTCATACCGTTAATGGTTAGTTCCTTTTAGCATGTGATATGATGGTTGATCATTGAAAATATTCACACTCATACACTTGTTTATATGTGTCTTTGGCACAATCTGATAATCTTTCATTATCTTGGAGATTTCATGTTCCTATGTGTAGTTTGTTGTTTAATCAAGTGCCAAATTTCAAAATAATGTTTAAAGCGTTCTATAGAAAAAGGCTTAATGAAACTCTTTTTAATTCACAAAGCATAGAAGTCTTCATGCACACCATAAAAATATTTAACCGTCTCCTGGCTGATAATTTTGAGAAGACAGTACATTTTATTTTTTATGATAAAGTTGGAATATCCCAACATATTCCTTGATCAGTTTTTTGAAAATCCATGTTTAAGATTTTTCCCATTAATTCCTTAATTCATTTGCAGGCAACACTCTGAAACTAGAGTATGTTGACCCGGTTTGGACCCCTGACAGTGGAAATCAAATCACGTCTCTGTTGAAGTTTAGTCGGCCAGATTTCTTGCTTGGTTCAGATTGGTATGAGCAATGTTCTGGGAATGACCAGAACCAATCCATCTTCTATGATGCTACATCGATGTTTCTCGAAGATCAATCAGCCACCGACTATAAACACACGACTGCTGGAACTTCTAACCCAAGTCAGGTAAGGGAGTTTGGTTCTTGTGCATGGAACAACATGCCTGCTGTCTGTCAAGTATCTGATCTTGGTTAA
Protein sequence

>MS.gene78908.t1

MMRRMKKEIEDEMLDDDRIGSEFNDEEYDRSAHGVLLKKGPWTSAEDDILVNYVKKNGEGNWNAVQKQTGLLRCGKSCRLRWANHLRPNLKKGTFTAEEEQLICELHAKLGNKWARMAAHLPGRTDNEIKNYWNTRIKRRHRAGLPLYPPEVLQQTLHGQSTDGINSGNKVHPDFLQKKNFDIHDAIYDCMKDNQGMLPYVAELPDISAYSNMLNGFDSSQYCSFGQSTSSNHKHFRDSTIPFLDFSCIDRNGYYPFDHIQDDTFYKWTQSFGMQSPLHHPGPSSHSSMCYSHSLKNGNSSTSMPFEELPSIQYPETDLGSWGTSPPPPLLESVDDFIKSPTPISTLESDCSSPQNSGLLQSVLYPRKTPSSSKNQFYVKSSNSSTATPGERAGNSALNMYETELEECADPVSPFGTSSILNECPAASANRSSLDEQPPVHTVNGNTLKLEYVDPVWTPDSGNQITSLLKFSRPDFLLGSDWYEQCSGNDQNQSIFYDATSMFLEDQSATDYKHTTAGTSNPSQVREFGSCAWNNMPAVCQVSDLG