AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene79365

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79365.t1 MTR_3g026250 97.493 678 17 0 1 678 1 678 0.0 1377
MS.gene79365.t1 MTR_4g112900 27.726 321 191 9 17 297 18 337 2.52e-28 117
MS.gene79365.t1 MTR_4g078290 26.101 318 180 12 29 310 132 430 2.07e-19 93.2
MS.gene79365.t1 MTR_4g078290 26.101 318 180 12 29 310 132 430 2.16e-19 93.2
MS.gene79365.t1 MTR_6g013030 28.085 235 144 9 33 262 116 330 2.69e-19 92.8
MS.gene79365.t1 MTR_3g098760 28.947 228 143 9 33 258 103 313 2.94e-19 92.4
MS.gene79365.t1 MTR_2g085200 28.879 232 146 8 33 262 140 354 1.06e-18 90.9
MS.gene79365.t1 MTR_8g099770 27.586 232 149 8 33 262 96 310 2.56e-18 89.4
MS.gene79365.t1 MTR_2g090405 27.234 235 152 9 33 265 147 364 5.98e-18 88.6
MS.gene79365.t1 MTR_2g020210 29.825 228 141 9 33 258 108 318 6.20e-18 88.2
MS.gene79365.t1 MTR_4g131060 28.114 281 164 13 26 292 17 273 2.22e-17 85.5
MS.gene79365.t1 MTR_1g081870 28.947 228 143 9 33 258 128 338 4.99e-17 85.5
MS.gene79365.t1 MTR_7g114300 27.632 228 146 9 33 258 113 323 8.05e-17 84.7
MS.gene79365.t1 MTR_5g075100 30.282 284 155 13 26 292 22 279 1.12e-16 83.6
MS.gene79365.t1 MTR_8g107000 27.376 263 165 10 33 289 735 977 1.31e-16 84.7
MS.gene79365.t1 MTR_8g024590 27.622 286 158 14 26 292 16 271 2.10e-16 82.8
MS.gene79365.t1 MTR_4g109090 25.000 232 155 8 33 262 111 325 2.57e-16 83.2
MS.gene79365.t1 MTR_8g092290 28.571 224 139 9 33 253 147 352 3.30e-16 82.8
MS.gene79365.t1 MTR_2g049790 28.523 298 156 15 26 299 22 286 3.90e-16 82.0
MS.gene79365.t1 MTR_6g079540 26.749 243 155 7 53 289 435 660 3.90e-16 82.8
MS.gene79365.t1 MTR_1g016300 27.897 233 147 6 65 293 700 915 5.38e-16 82.8
MS.gene79365.t1 MTR_7g114300 27.586 232 149 9 33 262 113 327 5.55e-16 80.9
MS.gene79365.t1 MTR_7g114300 27.632 228 146 9 33 258 113 323 8.93e-16 81.3
MS.gene79365.t1 MTR_7g114300 26.724 232 151 8 33 262 113 327 9.03e-16 80.5
MS.gene79365.t1 MTR_1g081790 26.296 270 171 10 27 289 689 937 1.03e-15 81.6
MS.gene79365.t1 MTR_3g110405 27.092 251 152 11 33 276 43 269 1.19e-15 78.6
MS.gene79365.t1 MTR_6g079540 26.749 243 155 7 53 289 683 908 1.34e-15 81.3
MS.gene79365.t1 MTR_1g103760 27.083 336 175 17 31 333 16 314 1.37e-15 80.1
MS.gene79365.t1 MTR_8g024600 27.273 286 159 14 26 292 16 271 2.29e-15 79.3
MS.gene79365.t1 MTR_3g101210 26.441 295 176 14 8 284 286 557 2.66e-15 80.1
MS.gene79365.t1 MTR_4g006970 27.682 289 169 11 26 299 19 282 3.01e-15 79.3
MS.gene79365.t1 MTR_1g041150 28.846 312 170 17 21 312 110 389 3.42e-15 79.7
MS.gene79365.t1 MTR_1g101630 31.897 232 122 12 70 289 86 293 3.49e-15 79.3
MS.gene79365.t1 MTR_1g048630 27.037 270 165 10 26 290 6 248 3.56e-15 80.1
MS.gene79365.t1 MTR_4g019410 28.413 271 151 13 29 283 21 264 4.66e-15 79.3
MS.gene79365.t1 MTR_3g101210 26.441 295 176 14 8 284 286 557 5.23e-15 79.0
MS.gene79365.t1 MTR_4g019410 28.413 271 151 13 29 283 21 264 6.50e-15 78.6
MS.gene79365.t1 MTR_3g072320 28.676 272 152 15 31 289 16 258 6.65e-15 77.8
MS.gene79365.t1 MTR_2g105010 28.421 285 172 13 26 299 13 276 6.82e-15 77.8
MS.gene79365.t1 MTR_2g016340 27.134 328 197 14 26 339 11 310 6.85e-15 77.8
MS.gene79365.t1 MTR_5g075060 27.599 279 158 15 31 292 16 267 8.50e-15 77.8
MS.gene79365.t1 MTR_5g088350 27.946 297 153 16 29 299 15 276 9.08e-15 77.4
MS.gene79365.t1 MTR_3g466480 29.181 281 161 13 26 292 20 276 1.10e-14 77.4
MS.gene79365.t1 MTR_4g118780 26.695 236 146 10 30 258 105 320 1.17e-14 77.8
MS.gene79365.t1 MTR_1g098300 27.155 232 150 9 33 262 132 346 1.68e-14 77.4
MS.gene79365.t1 MTR_7g072575 26.780 295 160 12 31 302 16 277 1.68e-14 77.0
MS.gene79365.t1 MTR_3g098070 28.344 314 172 17 38 334 44 321 1.84e-14 77.0
MS.gene79365.t1 MTR_3g098070 28.344 314 172 17 38 334 44 321 2.35e-14 75.5
MS.gene79365.t1 MTR_5g088350 27.946 297 153 16 29 299 15 276 3.25e-14 74.7
MS.gene79365.t1 MTR_5g066490 27.473 273 168 11 26 289 645 896 3.78e-14 76.6
MS.gene79365.t1 MTR_1g081790 26.754 228 145 7 27 252 689 896 4.18e-14 76.6
MS.gene79365.t1 MTR_5g088350 27.946 297 153 16 29 299 15 276 8.90e-14 74.3
MS.gene79365.t1 MTR_4g094430 29.487 234 141 11 33 262 10 223 1.03e-13 72.8
MS.gene79365.t1 MTR_5g017890 23.418 316 195 12 31 330 376 660 1.27e-13 74.7
MS.gene79365.t1 MTR_1g080020 29.864 221 125 9 70 283 54 251 1.28e-13 72.0
MS.gene79365.t1 MTR_5g018050 29.450 309 158 16 33 312 24 301 2.18e-13 72.4
MS.gene79365.t1 MTR_2g032060 30.638 235 137 11 33 262 10 223 2.36e-13 71.6
MS.gene79365.t1 MTR_5g082700 29.614 233 140 9 26 252 402 616 2.66e-13 73.9
MS.gene79365.t1 MTR_4g103810 27.311 238 147 9 31 262 222 439 3.07e-13 73.2
MS.gene79365.t1 MTR_4g122160 26.692 266 165 11 27 284 460 703 3.82e-13 73.2
MS.gene79365.t1 MTR_5g082700 29.614 233 140 9 26 252 402 616 4.76e-13 72.8
MS.gene79365.t1 MTR_4g107490 28.014 282 161 13 24 289 70 325 5.30e-13 72.4
MS.gene79365.t1 MTR_4g109090 24.352 193 130 6 70 262 1 177 5.82e-13 72.4
MS.gene79365.t1 MTR_3g096230 24.335 263 169 12 31 284 248 489 6.13e-13 72.4
MS.gene79365.t1 MTR_5g082700 30.734 218 127 9 26 237 402 601 6.21e-13 72.4
MS.gene79365.t1 MTR_4g103810 27.311 238 147 9 31 262 112 329 6.71e-13 71.6
MS.gene79365.t1 MTR_3g096230 24.335 263 169 12 31 284 248 489 7.28e-13 72.4
MS.gene79365.t1 MTR_5g099240 28.464 267 149 12 33 283 102 342 7.50e-13 72.0
MS.gene79365.t1 MTR_1g026190 28.369 282 159 14 20 283 72 328 8.25e-13 71.6
MS.gene79365.t1 MTR_8g080190 26.695 236 145 10 33 262 391 604 8.82e-13 72.0
MS.gene79365.t1 MTR_5g099240 29.588 267 146 13 33 283 30 270 8.83e-13 71.6
MS.gene79365.t1 MTR_5g010730 28.767 292 162 13 17 293 415 675 1.12e-12 71.6
MS.gene79365.t1 MTR_1g076370 26.132 287 165 13 26 292 19 278 1.13e-12 70.9
MS.gene79365.t1 MTR_2g034020 24.638 276 180 9 27 295 466 720 1.17e-12 71.6
MS.gene79365.t1 MTR_8g080190 26.695 236 145 10 33 262 391 604 1.42e-12 71.2
MS.gene79365.t1 MTR_7g045510 30.196 255 140 13 32 279 917 1140 1.75e-12 71.6
MS.gene79365.t1 MTR_5g010730 28.767 292 162 13 17 293 470 730 2.43e-12 70.9
MS.gene79365.t1 MTR_3g098090 27.365 296 155 17 38 312 47 303 3.10e-12 69.7
MS.gene79365.t1 MTR_0400s0040 29.515 227 129 13 32 249 885 1089 3.85e-12 70.5
MS.gene79365.t1 MTR_0365s0030 29.515 227 129 13 32 249 885 1089 3.85e-12 70.5
MS.gene79365.t1 MTR_3g085650 26.820 261 158 12 9 262 401 635 3.95e-12 70.1
MS.gene79365.t1 MTR_5g064540 27.723 303 159 16 26 303 3 270 4.16e-12 68.6
MS.gene79365.t1 MTR_3g051770 24.503 302 184 13 5 289 62 336 4.18e-12 69.7
MS.gene79365.t1 MTR_7g039330 30.196 255 140 13 32 279 1015 1238 4.32e-12 70.1
MS.gene79365.t1 MTR_1g054865 27.667 300 163 17 33 312 167 432 5.10e-12 69.3
MS.gene79365.t1 MTR_2g016490 28.326 233 130 11 31 252 44 250 5.19e-12 68.6
MS.gene79365.t1 MTR_2g072840 22.896 297 184 12 26 310 24 287 5.20e-12 69.3
MS.gene79365.t1 MTR_3g085650 26.820 261 158 12 9 262 401 635 5.25e-12 69.7
MS.gene79365.t1 MTR_3g085650 26.820 261 158 12 9 262 401 635 7.18e-12 69.3
MS.gene79365.t1 MTR_4g051648 25.185 270 172 11 29 290 10 257 7.73e-12 69.3
MS.gene79365.t1 MTR_4g114670 28.197 305 153 18 26 303 10 275 9.90e-12 68.2
MS.gene79365.t1 MTR_4g114670 28.197 305 153 18 26 303 10 275 1.14e-11 67.4
MS.gene79365.t1 MTR_4g132070 28.099 242 128 12 70 292 136 350 1.15e-11 68.2
MS.gene79365.t1 MTR_6g080470 23.706 367 213 14 31 364 18 350 1.19e-11 67.8
MS.gene79365.t1 MTR_2g045470 28.082 292 171 16 15 292 10 276 1.34e-11 67.8
MS.gene79365.t1 MTR_4g085810 31.579 209 122 8 32 236 330 521 1.68e-11 67.8
MS.gene79365.t1 MTR_5g091680 25.439 228 154 9 29 253 22 236 1.73e-11 67.4
MS.gene79365.t1 MTR_3g100090 25.468 267 169 11 27 284 653 898 1.84e-11 68.2
MS.gene79365.t1 MTR_5g091680 25.439 228 154 9 29 253 24 238 1.85e-11 67.4
MS.gene79365.t1 MTR_7g110060 26.201 229 140 11 31 252 79 285 1.96e-11 67.0
MS.gene79365.t1 MTR_2g083940 26.522 230 138 11 31 252 92 298 2.19e-11 67.0
MS.gene79365.t1 MTR_1g061190 27.016 248 151 10 72 309 599 826 2.21e-11 67.8
MS.gene79365.t1 MTR_2g078740 27.885 208 129 9 31 237 19 206 2.21e-11 67.8
MS.gene79365.t1 MTR_3g085650 26.820 261 158 12 9 262 401 635 2.23e-11 67.4
MS.gene79365.t1 MTR_5g091680 25.439 228 154 9 29 253 24 238 2.51e-11 67.0
MS.gene79365.t1 MTR_7g106730 26.749 243 142 12 70 298 133 353 2.84e-11 66.2
MS.gene79365.t1 MTR_5g091680 25.439 228 154 9 29 253 24 238 2.90e-11 66.6
MS.gene79365.t1 MTR_4g086855 28.972 214 110 9 123 312 16 211 3.20e-11 64.7
MS.gene79365.t1 MTR_4g086855 28.205 312 158 16 33 312 29 306 3.24e-11 65.9
MS.gene79365.t1 MTR_7g110060 23.411 299 169 13 31 291 79 355 3.52e-11 65.9
MS.gene79365.t1 MTR_2g083940 26.522 230 138 11 31 252 38 244 3.53e-11 65.9
MS.gene79365.t1 MTR_6g012980 25.338 296 181 14 13 294 59 328 4.23e-11 65.9
MS.gene79365.t1 MTR_1g034030 27.645 293 154 15 33 301 30 288 4.48e-11 65.5
MS.gene79365.t1 MTR_8g035890 25.547 274 167 13 33 294 22 270 6.47e-11 63.9
MS.gene79365.t1 MTR_1g040545 31.034 174 97 10 81 249 783 938 6.64e-11 66.2
MS.gene79365.t1 MTR_3g099920 23.948 309 178 14 29 308 21 301 6.66e-11 65.5
MS.gene79365.t1 MTR_1g052530 26.792 265 156 13 33 283 58 298 7.10e-11 65.5
MS.gene79365.t1 MTR_1g039240 29.825 228 129 13 31 249 884 1089 7.19e-11 66.2
MS.gene79365.t1 MTR_1g039220 29.825 228 127 14 32 249 859 1063 8.40e-11 65.9
MS.gene79365.t1 MTR_7g092360 31.214 173 98 7 116 284 104 259 8.54e-11 65.5
MS.gene79365.t1 MTR_1g096490 26.403 303 167 17 31 312 34 301 8.55e-11 65.5
MS.gene79365.t1 MTR_1g052530 26.792 265 156 13 33 283 58 298 9.22e-11 64.7
MS.gene79365.t1 MTR_8g089975 27.919 197 108 8 123 303 16 194 9.95e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79365.t1 AT2G32850 54.418 713 247 16 1 678 1 670 0.0 693
MS.gene79365.t1 AT2G32850 53.814 708 239 14 1 678 1 650 0.0 686
MS.gene79365.t1 AT5G08160 28.528 326 187 10 17 297 18 342 5.97e-28 115
MS.gene79365.t1 AT5G08160 31.047 277 165 9 46 297 31 306 1.25e-26 111
MS.gene79365.t1 AT1G03740 31.489 235 142 9 33 265 219 436 1.27e-21 100
MS.gene79365.t1 AT1G03740 31.489 235 142 9 33 265 219 436 1.40e-21 100
MS.gene79365.t1 AT1G53050 27.707 314 173 12 33 310 140 435 1.14e-19 94.0
MS.gene79365.t1 AT1G53050 27.707 314 173 12 33 310 140 435 1.14e-19 94.0
MS.gene79365.t1 AT5G50860 26.433 314 177 13 33 310 120 415 1.41e-19 93.6
MS.gene79365.t1 AT5G44290 30.702 228 139 9 33 258 143 353 1.44e-19 93.6
MS.gene79365.t1 AT5G44290 30.702 228 139 9 33 258 143 353 1.44e-19 93.6
MS.gene79365.t1 AT5G44290 30.702 228 139 9 33 258 143 353 1.44e-19 93.6
MS.gene79365.t1 AT5G44290 30.702 228 139 9 33 258 143 353 1.44e-19 93.6
MS.gene79365.t1 AT5G44290 30.702 228 139 9 33 258 143 353 1.44e-19 93.6
MS.gene79365.t1 AT5G44290 30.702 228 139 9 33 258 143 353 2.37e-19 92.8
MS.gene79365.t1 AT4G10010 28.017 232 148 8 33 262 162 376 2.49e-19 92.8
MS.gene79365.t1 AT5G44290 30.702 228 139 9 33 258 143 353 3.16e-19 92.0
MS.gene79365.t1 AT5G50860 26.433 314 177 13 33 310 120 415 4.02e-19 91.7
MS.gene79365.t1 AT5G58380 28.116 345 200 16 26 352 11 325 1.28e-18 89.7
MS.gene79365.t1 AT1G54610 29.004 231 139 9 33 258 124 334 2.38e-18 89.7
MS.gene79365.t1 AT1G54610 29.004 231 139 9 33 258 124 334 2.38e-18 89.7
MS.gene79365.t1 AT1G54610 29.004 231 139 9 33 258 124 334 2.38e-18 89.7
MS.gene79365.t1 AT1G33770 29.310 232 145 10 33 262 147 361 3.31e-18 89.4
MS.gene79365.t1 AT4G18700 30.216 278 152 15 31 292 30 281 3.99e-18 88.6
MS.gene79365.t1 AT5G45810 29.682 283 157 15 26 292 27 283 1.48e-17 86.7
MS.gene79365.t1 AT5G10930 29.739 306 171 16 26 315 11 288 3.60e-17 85.1
MS.gene79365.t1 AT1G30270 29.210 291 161 16 26 298 30 293 8.62e-17 84.3
MS.gene79365.t1 AT4G30960 28.620 297 171 15 12 292 8 279 9.08e-17 84.0
MS.gene79365.t1 AT1G30270 29.210 291 161 16 26 298 30 293 1.52e-16 83.2
MS.gene79365.t1 AT1G12680 33.333 180 95 9 70 247 145 301 1.64e-16 83.2
MS.gene79365.t1 AT5G11850 26.937 271 168 9 27 289 609 857 2.69e-16 83.6
MS.gene79365.t1 AT4G22940 28.509 228 145 8 33 258 109 320 3.88e-16 82.4
MS.gene79365.t1 AT1G71530 26.293 232 152 9 33 262 153 367 5.79e-16 82.4
MS.gene79365.t1 AT2G25880 27.490 251 151 11 33 276 31 257 9.81e-16 79.0
MS.gene79365.t1 AT4G22940 28.509 228 145 8 33 258 109 320 1.75e-15 80.1
MS.gene79365.t1 AT2G25880 27.490 251 151 11 33 276 44 270 1.93e-15 78.2
MS.gene79365.t1 AT3G10660 28.169 284 162 15 33 298 192 451 2.33e-15 80.1
MS.gene79365.t1 AT3G10660 28.169 284 162 15 33 298 192 451 2.33e-15 80.1
MS.gene79365.t1 AT2G30360 29.617 287 152 14 26 291 20 277 3.20e-15 79.0
MS.gene79365.t1 AT1G01140 29.167 288 161 15 22 292 16 277 3.59e-15 79.0
MS.gene79365.t1 AT5G35410 30.169 295 152 17 26 299 10 271 4.86e-15 77.8
MS.gene79365.t1 AT5G39420 26.809 235 149 9 33 263 111 326 5.78e-15 79.0
MS.gene79365.t1 AT5G57630 26.923 312 179 14 26 316 11 294 6.43e-15 77.8
MS.gene79365.t1 AT1G71530 26.316 228 149 9 33 258 153 363 6.47e-15 78.2
MS.gene79365.t1 AT5G04870 28.188 298 164 16 33 312 156 421 6.56e-15 79.0
MS.gene79365.t1 AT5G57630 26.923 312 179 14 26 316 11 294 9.09e-15 77.4
MS.gene79365.t1 AT4G24480 26.866 268 166 12 26 284 668 914 9.27e-15 78.6
MS.gene79365.t1 AT5G35410 30.169 295 152 17 26 299 10 271 9.58e-15 77.4
MS.gene79365.t1 AT1G67580 27.426 237 142 12 33 262 412 625 9.81e-15 78.6
MS.gene79365.t1 AT1G67580 27.426 237 142 12 33 262 412 625 9.81e-15 78.6
MS.gene79365.t1 AT1G74330 26.695 236 148 10 33 262 127 343 1.01e-14 78.2
MS.gene79365.t1 AT1G74330 26.695 236 148 10 33 262 127 343 1.05e-14 78.2
MS.gene79365.t1 AT2G25880 27.778 252 149 12 33 276 92 318 1.14e-14 76.6
MS.gene79365.t1 AT4G24480 26.866 268 166 12 26 284 668 914 1.21e-14 78.6
MS.gene79365.t1 AT1G71530 26.293 232 152 9 33 262 153 367 1.25e-14 77.0
MS.gene79365.t1 AT4G10010 27.551 196 126 7 63 258 13 192 1.31e-14 77.4
MS.gene79365.t1 AT1G18670 25.000 232 156 8 33 262 137 352 1.35e-14 77.8
MS.gene79365.t1 AT1G74330 26.695 236 148 10 33 262 127 343 1.38e-14 77.8
MS.gene79365.t1 AT4G32830 26.295 251 154 11 33 276 37 263 1.39e-14 75.5
MS.gene79365.t1 AT1G18670 25.000 232 156 8 33 262 137 352 1.50e-14 77.8
MS.gene79365.t1 AT1G01140 27.875 287 164 15 22 292 16 275 1.53e-14 77.0
MS.gene79365.t1 AT1G18670 25.000 232 156 8 33 262 137 352 1.82e-14 77.4
MS.gene79365.t1 AT1G29230 27.915 283 162 14 26 292 73 329 2.21e-14 76.6
MS.gene79365.t1 AT1G01140 27.875 287 164 15 22 292 16 275 2.23e-14 76.6
MS.gene79365.t1 AT5G49470 25.738 237 153 8 64 295 527 745 3.46e-14 76.6
MS.gene79365.t1 AT5G49470 25.738 237 153 8 64 295 501 719 3.56e-14 76.6
MS.gene79365.t1 AT5G20930 25.926 297 162 12 22 286 404 674 3.56e-14 76.6
MS.gene79365.t1 AT1G71530 27.273 220 141 9 33 250 153 355 3.78e-14 75.1
MS.gene79365.t1 AT1G12580 28.671 286 164 14 20 289 35 296 4.10e-14 75.9
MS.gene79365.t1 AT1G08720 25.185 270 174 9 27 289 669 917 4.24e-14 76.6
MS.gene79365.t1 AT1G66750 25.000 304 173 12 31 308 17 291 5.00e-14 74.3
MS.gene79365.t1 AT4G24480 26.740 273 165 12 26 284 668 919 5.51e-14 76.3
MS.gene79365.t1 AT5G49470 25.000 236 156 6 64 295 240 458 5.65e-14 75.5
MS.gene79365.t1 AT4G23050 25.926 270 172 10 27 289 468 716 6.40e-14 75.9
MS.gene79365.t1 AT4G23050 25.926 270 172 10 27 289 467 715 6.62e-14 75.9
MS.gene79365.t1 AT3G01085 26.724 232 151 9 33 262 121 335 6.84e-14 75.5
MS.gene79365.t1 AT3G01085 26.724 232 151 9 33 262 121 335 7.12e-14 75.5
MS.gene79365.t1 AT3G01085 26.724 232 151 9 33 262 121 335 7.12e-14 75.5
MS.gene79365.t1 AT5G49470 25.000 236 156 6 64 295 400 618 7.72e-14 75.5
MS.gene79365.t1 AT4G04720 26.974 304 163 16 31 312 84 350 7.94e-14 75.1
MS.gene79365.t1 AT4G04720 26.974 304 163 16 31 312 84 350 7.94e-14 75.1
MS.gene79365.t1 AT5G03730 28.049 246 147 10 14 252 538 760 9.21e-14 75.5
MS.gene79365.t1 AT5G03730 28.049 246 147 10 14 252 538 760 9.21e-14 75.5
MS.gene79365.t1 AT1G73660 25.926 270 174 10 26 289 747 996 9.86e-14 75.5
MS.gene79365.t1 AT3G06630 27.273 231 144 8 27 254 434 643 1.00e-13 75.1
MS.gene79365.t1 AT1G63700 23.792 269 173 12 31 289 404 650 1.02e-13 75.5
MS.gene79365.t1 AT1G63700 23.792 269 173 12 31 289 404 650 1.02e-13 75.5
MS.gene79365.t1 AT3G06630 27.273 231 144 8 27 254 434 643 1.07e-13 75.1
MS.gene79365.t1 AT1G61950 27.445 317 177 17 3 292 68 358 1.09e-13 74.7
MS.gene79365.t1 AT1G67890 26.582 237 150 8 64 295 523 740 1.29e-13 74.7
MS.gene79365.t1 AT5G04510 27.099 262 169 10 31 284 48 295 1.59e-13 73.9
MS.gene79365.t1 AT3G06630 27.632 228 141 8 27 251 434 640 1.72e-13 74.3
MS.gene79365.t1 AT3G06630 27.632 228 141 8 27 251 434 640 1.72e-13 74.3
MS.gene79365.t1 AT3G06630 27.632 228 141 8 27 251 434 640 1.72e-13 74.3
MS.gene79365.t1 AT5G04510 27.481 262 168 10 31 284 48 295 1.73e-13 73.6
MS.gene79365.t1 AT5G19450 28.938 273 152 16 33 289 63 309 1.77e-13 73.9
MS.gene79365.t1 AT5G19450 28.938 273 152 16 33 289 63 309 1.77e-13 73.9
MS.gene79365.t1 AT5G10270 25.523 239 141 11 33 253 32 251 1.89e-13 73.9
MS.gene79365.t1 AT1G18160 25.926 270 174 10 26 289 714 963 2.07e-13 74.3
MS.gene79365.t1 AT3G06630 27.632 228 141 8 27 251 350 556 2.14e-13 73.9
MS.gene79365.t1 AT4G21940 24.695 328 194 14 4 312 79 372 3.14e-13 73.2
MS.gene79365.t1 AT2G26980 25.987 304 156 14 26 299 13 277 4.18e-13 72.4
MS.gene79365.t1 AT2G26980 25.987 304 156 14 26 299 13 277 4.65e-13 72.0
MS.gene79365.t1 AT1G67890 28.571 189 117 5 64 252 523 693 4.91e-13 73.2
MS.gene79365.t1 AT1G67890 28.571 189 117 5 64 252 523 693 4.91e-13 73.2
MS.gene79365.t1 AT2G26980 25.987 304 156 14 26 299 23 287 4.93e-13 72.4
MS.gene79365.t1 AT4G10390 27.391 230 151 9 21 246 35 252 4.94e-13 71.2
MS.gene79365.t1 AT4G04710 26.866 268 162 12 33 289 42 286 4.98e-13 72.4
MS.gene79365.t1 AT4G21940 24.695 328 194 14 4 312 79 372 5.12e-13 72.8
MS.gene79365.t1 AT4G21940 24.695 328 194 14 4 312 79 372 5.24e-13 72.4
MS.gene79365.t1 AT5G64960 25.410 244 145 11 33 258 32 256 6.24e-13 72.0
MS.gene79365.t1 AT1G35670 28.413 271 148 15 31 283 30 272 8.15e-13 71.6
MS.gene79365.t1 AT2G30980 26.592 267 153 12 31 280 76 316 8.30e-13 71.2
MS.gene79365.t1 AT2G17890 26.198 313 179 17 17 301 93 381 1.05e-12 71.6
MS.gene79365.t1 AT4G38230 28.986 276 153 16 30 289 58 306 1.11e-12 71.2
MS.gene79365.t1 AT1G09600 26.724 232 151 9 33 262 169 383 1.21e-12 71.6
MS.gene79365.t1 AT5G66850 23.616 271 176 10 31 289 350 601 1.30e-12 71.6
MS.gene79365.t1 AT1G67890 28.571 189 117 5 64 252 395 565 1.40e-12 71.2
MS.gene79365.t1 AT2G37840 27.138 269 157 12 29 283 14 257 1.50e-12 71.2
MS.gene79365.t1 AT3G07980 25.993 277 161 13 33 292 26 275 1.71e-12 71.6
MS.gene79365.t1 AT3G07980 25.993 277 161 13 33 292 26 275 1.79e-12 71.6
MS.gene79365.t1 AT4G04700 30.420 286 146 15 43 300 41 301 1.89e-12 70.5
MS.gene79365.t1 AT5G12480 26.596 282 165 13 24 289 56 311 1.93e-12 70.9
MS.gene79365.t1 AT3G44200 25.940 266 167 11 33 290 14 257 1.94e-12 71.2
MS.gene79365.t1 AT3G44200 25.940 266 167 11 33 290 14 257 1.94e-12 71.2
MS.gene79365.t1 AT5G12180 25.538 325 201 16 17 323 63 364 1.96e-12 70.9
MS.gene79365.t1 AT5G21222 28.276 290 153 14 26 292 12 269 2.09e-12 71.2
MS.gene79365.t1 AT5G21222 28.276 290 153 14 26 292 12 269 2.09e-12 71.2
MS.gene79365.t1 AT5G21222 28.276 290 153 14 26 292 12 269 2.09e-12 71.2
MS.gene79365.t1 AT5G21222 28.276 290 153 14 26 292 12 269 2.09e-12 71.2
MS.gene79365.t1 AT5G66850 23.616 271 176 10 31 289 350 601 2.11e-12 70.9
MS.gene79365.t1 AT1G50700 26.804 291 153 14 29 292 75 332 2.48e-12 70.1
MS.gene79365.t1 AT5G21326 27.090 299 149 15 26 294 12 271 2.49e-12 70.1
MS.gene79365.t1 AT3G20410 27.465 284 156 14 31 292 95 350 2.54e-12 70.5
MS.gene79365.t1 AT3G20410 27.465 284 156 14 31 292 95 350 2.54e-12 70.5
MS.gene79365.t1 AT4G38230 28.986 276 153 16 30 289 28 276 2.58e-12 70.1
MS.gene79365.t1 AT4G38230 28.986 276 153 16 30 289 28 276 2.58e-12 70.1
MS.gene79365.t1 AT2G26980 25.987 304 156 14 26 299 13 277 2.64e-12 69.7
MS.gene79365.t1 AT1G08720 25.439 228 148 6 27 252 669 876 2.87e-12 70.9
MS.gene79365.t1 AT1G02970 26.336 262 163 13 27 284 249 484 3.35e-12 69.7
MS.gene79365.t1 AT5G19360 26.045 311 189 16 31 323 72 359 3.62e-12 69.7
MS.gene79365.t1 AT1G50700 26.804 291 153 14 29 292 75 332 4.41e-12 69.7
MS.gene79365.t1 AT2G45490 27.509 269 154 13 33 289 28 267 5.55e-12 67.4
MS.gene79365.t1 AT1G50240 28.037 214 124 9 28 236 7 195 6.16e-12 69.7
MS.gene79365.t1 AT1G50240 28.037 214 124 9 28 236 7 195 6.16e-12 69.7
MS.gene79365.t1 AT5G07070 28.723 282 161 14 26 292 11 267 6.67e-12 68.6
MS.gene79365.t1 AT4G09570 28.044 271 149 14 31 283 29 271 7.30e-12 68.9
MS.gene79365.t1 AT3G10540 27.099 262 169 10 31 284 49 296 7.54e-12 68.6
MS.gene79365.t1 AT5G60550 27.451 255 156 12 42 289 132 364 7.93e-12 68.2
MS.gene79365.t1 AT5G49470 27.128 188 120 5 64 251 527 697 7.94e-12 68.9
MS.gene79365.t1 AT2G41860 26.667 270 162 12 33 289 60 306 8.34e-12 68.6
MS.gene79365.t1 AT2G38910 27.302 315 175 17 8 294 107 395 8.91e-12 68.6
MS.gene79365.t1 AT1G50700 26.804 291 153 14 29 292 75 332 9.99e-12 68.6
MS.gene79365.t1 AT4G04710 27.273 253 151 11 42 283 36 266 1.00e-11 68.2
MS.gene79365.t1 AT5G14640 27.753 227 139 10 31 252 78 284 1.15e-11 67.8
MS.gene79365.t1 AT5G14640 27.753 227 139 10 31 252 78 284 1.15e-11 67.8
MS.gene79365.t1 AT2G38490 30.556 216 124 9 26 236 27 221 1.17e-11 67.8
MS.gene79365.t1 AT1G76040 27.240 279 162 14 20 283 106 358 1.24e-11 68.2
MS.gene79365.t1 AT1G78290 27.491 291 171 13 26 301 3 268 1.26e-11 67.0
MS.gene79365.t1 AT1G78290 27.491 291 171 13 26 301 3 268 1.26e-11 67.0
MS.gene79365.t1 AT1G76040 27.240 279 162 14 20 283 106 358 1.46e-11 68.2
MS.gene79365.t1 AT3G53930 27.076 277 147 14 29 283 22 265 1.60e-11 68.2
MS.gene79365.t1 AT3G13530 24.638 276 166 14 33 292 26 275 1.65e-11 68.6
MS.gene79365.t1 AT4G04710 29.577 213 116 12 33 234 42 231 1.70e-11 67.8
MS.gene79365.t1 AT3G53930 27.076 277 147 14 29 283 22 265 1.72e-11 68.2
MS.gene79365.t1 AT5G39440 27.148 291 161 15 29 301 21 278 1.81e-11 67.4
MS.gene79365.t1 AT4G04710 29.577 213 116 12 33 234 42 231 1.83e-11 67.4
MS.gene79365.t1 AT3G57530 27.985 268 155 13 33 287 69 311 1.95e-11 67.4
MS.gene79365.t1 AT2G41860 26.296 270 163 12 33 289 60 306 2.19e-11 67.4
MS.gene79365.t1 AT3G57530 27.985 268 155 13 33 287 69 311 2.26e-11 67.0
MS.gene79365.t1 AT5G18700 29.577 213 123 11 28 238 5 192 2.80e-11 67.8
MS.gene79365.t1 AT2G26980 27.801 241 115 11 26 244 13 216 2.95e-11 65.1
MS.gene79365.t1 AT4G33950 28.378 296 154 14 31 302 25 286 3.19e-11 65.9
MS.gene79365.t1 AT1G08650 28.829 222 130 9 62 277 52 251 3.31e-11 65.1
MS.gene79365.t1 AT1G18890 28.696 230 132 11 70 289 108 315 3.42e-11 66.6
MS.gene79365.t1 AT1G20930 27.917 240 145 11 33 262 22 243 3.68e-11 65.5
MS.gene79365.t1 AT4G33950 28.378 296 154 14 31 302 25 286 4.14e-11 65.9
MS.gene79365.t1 AT1G08650 28.829 222 130 9 62 277 52 251 4.72e-11 64.7
MS.gene79365.t1 AT2G40120 28.755 233 142 9 26 252 260 474 5.35e-11 66.2
MS.gene79365.t1 AT3G61960 28.253 269 147 15 33 283 16 256 5.51e-11 66.2
MS.gene79365.t1 AT2G31500 27.755 245 137 14 70 298 111 331 5.99e-11 66.2
MS.gene79365.t1 AT1G06390 27.039 233 133 11 31 252 74 280 7.58e-11 65.1
MS.gene79365.t1 AT1G06390 27.039 233 133 11 31 252 74 280 7.58e-11 65.1
MS.gene79365.t1 AT3G61960 28.253 269 147 15 33 283 16 256 7.92e-11 65.9

Find 167 sgRNAs with CRISPR-Local

Find 264 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCATTAATGACTTCTTTC+AGG 0.188221 3.1:+17213576 None:intergenic
TGTTGGGTTCAGATGGTTTA+TGG 0.203921 3.1:-17214029 MS.gene79365:CDS
TGCTAATGCCATCTATGATA+TGG 0.225693 3.1:-17214419 MS.gene79365:CDS
GTGAGGGTTGAATTAAATTT+AGG 0.232196 3.1:+17213336 None:intergenic
TCCTCGATTCCCATTTCTTC+TGG 0.249652 3.1:+17213955 None:intergenic
CTCAAAACGTTTGTGATTTG+TGG 0.254929 3.1:+17213981 None:intergenic
TCAAAGCTCCAAGTCTTAAA+TGG 0.274776 3.1:-17213381 MS.gene79365:CDS
CTCAGCCATCTCTTGCTTCT+AGG 0.282557 3.1:-17212761 MS.gene79365:CDS
AGTTGCATCATCTGCATCTT+TGG 0.294484 3.1:-17212127 MS.gene79365:intron
TTATGGAAGTTGTGTGATTT+TGG 0.299194 3.1:-17214012 MS.gene79365:CDS
AGATGGCTGAGGGGTAGTTT+TGG 0.319968 3.1:+17212773 None:intergenic
GCTTCTAGGGGAGGGGAAAG+TGG 0.324528 3.1:-17212747 MS.gene79365:CDS
GAATTAAATTTAGGTAAATC+AGG 0.344942 3.1:+17213345 None:intergenic
TTGTTGGAAGAGGGTGATTC+GGG 0.346655 3.1:+17213059 None:intergenic
TCCTTGGAAGATGCAGCTTC+AGG 0.349436 3.1:+17212513 None:intergenic
TGTCCTACCCATATCATAGA+TGG 0.364922 3.1:+17214411 None:intergenic
TTCACAAAGGCAAGAATTGC+AGG 0.365622 3.1:-17212217 MS.gene79365:CDS
TTACTCCCTTCACCAGGTCT+TGG 0.369187 3.1:+17211740 None:intergenic
TGCATTACCTTCATGATTGT+TGG 0.370030 3.1:+17213043 None:intergenic
GCATGAAGTGTGACAACATT+AGG 0.371714 3.1:+17214439 None:intergenic
TGAGAAGCAAATGTCAAATC+TGG 0.375656 3.1:-17212451 MS.gene79365:CDS
TCATTTGCATGACCTTTATC+CGG 0.386573 3.1:+17212471 None:intergenic
TTCTAGGGGAGGGGAAAGTG+GGG 0.388161 3.1:-17212745 MS.gene79365:CDS
CTTCTAGGGGAGGGGAAAGT+GGG 0.392824 3.1:-17212746 MS.gene79365:CDS
TCAGCCATCTCTTGCTTCTA+GGG 0.393788 3.1:-17212760 MS.gene79365:CDS
TATTGTTACCGGTGAGCAAT+AGG 0.394447 3.1:+17214238 None:intergenic
GCGCTTGCCTGCGTGATATC+TGG 0.397065 3.1:+17213270 None:intergenic
GGTGATTCGGGTGGCCTGTC+AGG 0.403093 3.1:+17213071 None:intergenic
AAAAGAGGCTTTCCTTGTAA+TGG 0.404156 3.1:-17214389 MS.gene79365:CDS
GATGACTTTGGTTCTGAACT+AGG 0.405933 3.1:+17211953 None:intergenic
AAAATTTATTTCGAAATCCT+TGG 0.407341 3.1:+17212497 None:intergenic
TTCACGTGTCCCTGAGGAAA+AGG 0.407398 3.1:-17212682 MS.gene79365:CDS
CTCTAATGCTTCTTCCCTTG+TGG 0.415054 3.1:+17212335 None:intergenic
GGTCGTTCTTCATCATATAC+AGG 0.418881 3.1:+17212654 None:intergenic
TTAATGAGAAAGTGGACATA+TGG 0.423045 3.1:-17213562 MS.gene79365:CDS
TCTCAACCTGCTGGATGGGC+TGG 0.429734 3.1:-17211671 MS.gene79365:CDS
AAAGAGCAAAATGGTCTTGA+AGG 0.434157 3.1:-17214661 MS.gene79365:CDS
AACTTCTCAACCTGCTGGAT+GGG 0.434510 3.1:-17211675 MS.gene79365:CDS
TACTTCAAAAGTGCATTTGA+TGG 0.435264 3.1:-17213408 MS.gene79365:CDS
GTCATCATGGCAACCTTTCT+CGG 0.436449 3.1:-17211936 MS.gene79365:CDS
CTGTGTGTTAGCCACTTTGT+TGG 0.440073 3.1:+17212578 None:intergenic
AAAGCGGAAAATCTTCTGTT+GGG 0.442518 3.1:-17214045 MS.gene79365:CDS
GTGCTGGAGAGCCGCGGTGC+TGG 0.443557 3.1:-17214340 MS.gene79365:CDS
ATAATGCTTCAAAATCTGTT+AGG 0.445607 3.1:-17211880 MS.gene79365:CDS
GAAAGCGGAAAATCTTCTGT+TGG 0.447040 3.1:-17214046 MS.gene79365:CDS
TCAGCAGCTGGTTGAATAGC+TGG 0.448201 3.1:+17211833 None:intergenic
ATTGTTGGAAGAGGGTGATT+CGG 0.450024 3.1:+17213058 None:intergenic
CATTGGACTTGATTTGTTTG+TGG 0.451833 3.1:+17212836 None:intergenic
CTAGGGGAGGGGAAAGTGGG+GGG 0.452693 3.1:-17212743 MS.gene79365:CDS
TGAAGCATTATCTGCTGAAA+GGG 0.457877 3.1:+17211892 None:intergenic
GGTGGATTTCTGCGAGGCAT+TGG 0.459471 3.1:+17212819 None:intergenic
TTTGGTAACTGATCATTGTC+CGG 0.459775 3.1:+17212612 None:intergenic
TCTAGGGGAGGGGAAAGTGG+GGG 0.462585 3.1:-17212744 MS.gene79365:CDS
TCACCAGGTCTTGGCATCTG+TGG 0.464964 3.1:+17211749 None:intergenic
CATTTGCATGACCTTTATCC+GGG 0.470456 3.1:+17212472 None:intergenic
ATTTAGGTAAATCAGGAATC+CGG 0.470930 3.1:+17213352 None:intergenic
TCTGCTGAAAGGGATTTAAA+CGG 0.473651 3.1:+17211902 None:intergenic
AAAGGTTGCCATGATGACTT+TGG 0.475810 3.1:+17211941 None:intergenic
CTCCTTCAGCAATGAGCTTG+TGG 0.476954 3.1:+17214602 None:intergenic
CAAGTCTCTGGTTAGTGTGC+TGG 0.477245 3.1:-17214356 MS.gene79365:CDS
AGGGTTCTCATGTGTCTACT+TGG 0.477773 3.1:-17214581 MS.gene79365:CDS
TGTGGATTTGTTACCATGCC+CGG 0.478497 3.1:+17212353 None:intergenic
GTTCTGAAACCCTCTCTACT+TGG 0.479928 3.1:+17212159 None:intergenic
TTTGAGAAGCCAGAAGAAAT+GGG 0.479994 3.1:-17213964 MS.gene79365:CDS
GCTAATGCCATCTATGATAT+GGG 0.480952 3.1:-17214418 MS.gene79365:CDS
AAATCTGTTAGGTCAAGAAA+TGG 0.487218 3.1:-17211869 MS.gene79365:CDS
GGTGAGCAATAGGCGGGGAC+TGG 0.487744 3.1:+17214248 None:intergenic
GGTTCAGTTTCCTCCGAGAA+AGG 0.488379 3.1:+17211923 None:intergenic
GGACGAACTCTGTGGTGGCT+AGG 0.492177 3.1:+17212633 None:intergenic
AGAAGTCATTAATGAGAAAG+TGG 0.493051 3.1:-17213570 MS.gene79365:CDS
GAGGGTTTCAGAACCTCTCC+TGG 0.493651 3.1:-17212150 MS.gene79365:CDS
TCTTGGCATCTGTGGGCTAC+CGG 0.494475 3.1:+17211757 None:intergenic
CACCAGGTCTTGGCATCTGT+GGG 0.494706 3.1:+17211750 None:intergenic
AATCTTCTGTTGGGTTCAGA+TGG 0.495217 3.1:-17214036 MS.gene79365:CDS
GGTAGTTTCCATTTAAGACT+TGG 0.497514 3.1:+17213373 None:intergenic
TTCGCACATAAAGAGCAAAA+TGG 0.498865 3.1:-17214670 MS.gene79365:CDS
CAACAAAAGTGTTAAAAGAC+TGG 0.499295 3.1:+17212403 None:intergenic
CAACTTCTCAACCTGCTGGA+TGG 0.504337 3.1:-17211676 MS.gene79365:CDS
ACTTCAAAAGTGCATTTGAT+GGG 0.504771 3.1:-17213407 MS.gene79365:CDS
CCATCTCTTGCTTCTAGGGG+AGG 0.505410 3.1:-17212756 MS.gene79365:CDS
GCAACCGATGGAGGAGGAGG+TGG 0.506062 3.1:+17212801 None:intergenic
CGATGAAGAATCACTTGGAT+TGG 0.508906 3.1:-17214503 MS.gene79365:CDS
GTGATATCTGGTCTGTCGTC+TGG 0.509677 3.1:+17213282 None:intergenic
CCTTCATGATTGTTGGAAGA+GGG 0.510781 3.1:+17213050 None:intergenic
TAATGAGAAAGTGGACATAT+GGG 0.510904 3.1:-17213561 MS.gene79365:intron
GCTTGAATATGTTAGGCACT+TGG 0.511385 3.1:-17213453 MS.gene79365:intron
ATCTCTTGCTTCTAGGGGAG+GGG 0.513102 3.1:-17212754 MS.gene79365:CDS
ACCTTCATGATTGTTGGAAG+AGG 0.514665 3.1:+17213049 None:intergenic
ACATTTAGTGCTGCCCGTGC+TGG 0.514975 3.1:-17211782 MS.gene79365:CDS
TACAAAAGTCATTACCTGAC+AGG 0.519490 3.1:-17213085 MS.gene79365:CDS
TGTCACAAAATTCCATTACA+AGG 0.519669 3.1:+17214377 None:intergenic
TCTGCAACCGATGGAGGAGG+AGG 0.520741 3.1:+17212798 None:intergenic
CTGGTCCACTCTGCATGCAA+AGG 0.520841 3.1:-17212706 MS.gene79365:CDS
TTGAAGCATTATCTGCTGAA+AGG 0.524348 3.1:+17211891 None:intergenic
CTTGAATATGTTAGGCACTT+GGG 0.524452 3.1:-17213452 MS.gene79365:intron
GATGCAGATGATGCAACTCC+AGG 0.526421 3.1:+17212132 None:intergenic
AGTGCTGCCCGTGCTGGTAC+CGG 0.526607 3.1:-17211776 MS.gene79365:CDS
GCAATTCTTGCCTTTGTGAA+CGG 0.527486 3.1:+17212220 None:intergenic
TAGCCACCACAGAGTTCGTC+CGG 0.529385 3.1:-17212631 MS.gene79365:CDS
AAGTCTTAAATGGAAACTAC+CGG 0.531594 3.1:-17213371 MS.gene79365:CDS
CACAAGCTCATTGCTGAAGG+AGG 0.535951 3.1:-17214601 MS.gene79365:CDS
TGGGCTACCGGTACCAGCAC+GGG 0.536399 3.1:+17211769 None:intergenic
AAATCAACTTCTCAACCTGC+TGG 0.537132 3.1:-17211680 MS.gene79365:CDS
TCTGTAATGAAGTTGTTGAT+AGG 0.537850 3.1:-17214466 MS.gene79365:CDS
GGTTCTGCAACCGATGGAGG+AGG 0.541622 3.1:+17212795 None:intergenic
CCCTCTTCCAACAATCATGA+AGG 0.545972 3.1:-17213050 MS.gene79365:intron
GTCTCTGATCAAGTCTGTGA+GGG 0.546497 3.1:+17213320 None:intergenic
CAAGAATCAAAATCAGCAGC+TGG 0.549539 3.1:+17211821 None:intergenic
CATCTCTTGCTTCTAGGGGA+GGG 0.550662 3.1:-17212755 MS.gene79365:CDS
TCACGTGTCCCTGAGGAAAA+GGG 0.552900 3.1:-17212681 MS.gene79365:CDS
TTCAGCAGGATAGAAGTGAA+TGG 0.556055 3.1:-17211982 MS.gene79365:intron
AAATCCACCTCCTCCTCCAT+CGG 0.556241 3.1:-17212805 MS.gene79365:CDS
AAACCCTCTCTACTTGGAGA+TGG 0.558781 3.1:+17212165 None:intergenic
ACCTGAAGCTGCATCTTCCA+AGG 0.559009 3.1:-17212514 MS.gene79365:CDS
GGAAGAAGCATTAGAGTCTG+AGG 0.566940 3.1:-17212328 MS.gene79365:CDS
CAGCCATCTCTTGCTTCTAG+GGG 0.571997 3.1:-17212759 MS.gene79365:CDS
ATGCCCGGAGTTTAGCTTAG+CGG 0.573826 3.1:+17212368 None:intergenic
TTGGGTTCTGCAACCGATGG+AGG 0.574182 3.1:+17212792 None:intergenic
AGAAGCATTAGAGTCTGAGG+TGG 0.576012 3.1:-17212325 MS.gene79365:CDS
GTCCACAAGCTCATTGCTGA+AGG 0.577847 3.1:-17214604 MS.gene79365:CDS
AGCCCACAGATGCCAAGACC+TGG 0.579173 3.1:-17211752 MS.gene79365:CDS
GTTCAGAACCAAAGTCATCA+TGG 0.583479 3.1:-17211949 MS.gene79365:CDS
AGGCGGGGACTGGCAGTGCA+TGG 0.583770 3.1:+17214258 None:intergenic
GCCAGAAGAAATGGGAATCG+AGG 0.584216 3.1:-17213956 MS.gene79365:CDS
GTTACCGGTGAGCAATAGGC+GGG 0.585891 3.1:+17214242 None:intergenic
AACTCCATCTCCAAGTAGAG+AGG 0.590543 3.1:-17212169 MS.gene79365:CDS
TGATATGGGTAGGACAAAAG+AGG 0.591244 3.1:-17214404 MS.gene79365:CDS
TGCAACGATGAAGAATCACT+TGG 0.592691 3.1:-17214508 MS.gene79365:CDS
GAAACTCAGAGAGCAGCTGA+AGG 0.593651 3.1:-17212301 MS.gene79365:CDS
ACTCCATCTCCAAGTAGAGA+GGG 0.594417 3.1:-17212168 MS.gene79365:CDS
CTTCAAAAGTGCATTTGATG+GGG 0.602309 3.1:-17213406 MS.gene79365:CDS
ATACCGCTAAGCTAAACTCC+GGG 0.605101 3.1:-17212371 MS.gene79365:CDS
GCTAAGCTAAACTCCGGGCA+TGG 0.605785 3.1:-17212366 MS.gene79365:CDS
ATGCCATCTATGATATGGGT+AGG 0.605844 3.1:-17214414 MS.gene79365:CDS
CTAGAAGCAAGAGATGGCTG+AGG 0.611264 3.1:+17212762 None:intergenic
GTGGGCTACCGGTACCAGCA+CGG 0.612967 3.1:+17211768 None:intergenic
TTGGAAGAGGGTGATTCGGG+TGG 0.614579 3.1:+17213062 None:intergenic
AAATGTTAGTACCAACAAAG+TGG 0.615394 3.1:-17212589 MS.gene79365:CDS
CAGATGCCAAGACCTGGTGA+AGG 0.617032 3.1:-17211746 MS.gene79365:CDS
TGAGCTTTACTCCCTTCACC+AGG 0.617573 3.1:+17211734 None:intergenic
GAAGGTCGTTCTATAGACGT+TGG 0.619556 3.1:-17214643 MS.gene79365:CDS
TAGAAGCAAGAGATGGCTGA+GGG 0.620956 3.1:+17212763 None:intergenic
AGTCCCCGCCTATTGCTCAC+CGG 0.621278 3.1:-17214246 MS.gene79365:intron
AGATGCCAAGACCTGGTGAA+GGG 0.622291 3.1:-17211745 MS.gene79365:CDS
ACAAGCTCATTGCTGAAGGA+GGG 0.624219 3.1:-17214600 MS.gene79365:CDS
CTGCTATCTGCCGTTCACAA+AGG 0.626119 3.1:-17212230 MS.gene79365:CDS
GATACCGCTAAGCTAAACTC+CGG 0.627950 3.1:-17212372 MS.gene79365:CDS
TGTCCGGACGAACTCTGTGG+TGG 0.635775 3.1:+17212628 None:intergenic
GTTTCTCAGAGACTTGAAAG+CGG 0.642125 3.1:-17214061 MS.gene79365:intron
CCTCCCCTAGAAGCAAGAGA+TGG 0.644007 3.1:+17212756 None:intergenic
GGCATGGTAACAAATCCACA+AGG 0.644452 3.1:-17212350 MS.gene79365:CDS
AAATCTCAACATACCTCGGG+GGG 0.649501 3.1:+17213895 None:intergenic
TGTCTCTGATCAAGTCTGTG+AGG 0.652702 3.1:+17213319 None:intergenic
TGTTACCGGTGAGCAATAGG+CGG 0.666278 3.1:+17214241 None:intergenic
AGATGATGCAACTCCAGGAG+AGG 0.670074 3.1:+17212137 None:intergenic
AGAAGCAAGAGATGGCTGAG+GGG 0.671373 3.1:+17212764 None:intergenic
TGAATCCTTTGCATGCAGAG+TGG 0.673662 3.1:+17212701 None:intergenic
GTTAGTGTGCTGGAGAGCCG+CGG 0.677200 3.1:-17214346 MS.gene79365:CDS
TTACCGGTGAGCAATAGGCG+GGG 0.700415 3.1:+17214243 None:intergenic
CAAATCTCAACATACCTCGG+GGG 0.702329 3.1:+17213894 None:intergenic
CGACAGACCAGATATCACGC+AGG 0.713771 3.1:-17213277 MS.gene79365:intron
AAAGGATTCACGTGTCCCTG+AGG 0.716146 3.1:-17212688 MS.gene79365:CDS
ATCATGGCAACCTTTCTCGG+AGG 0.730025 3.1:-17211933 MS.gene79365:CDS
CATTGTCCGGACGAACTCTG+TGG 0.731222 3.1:+17212625 None:intergenic
GGAGGAGGTGGATTTCTGCG+AGG 0.732203 3.1:+17212813 None:intergenic
GCATGGTAACAAATCCACAA+GGG 0.737909 3.1:-17212349 MS.gene79365:CDS
CTTCAAAATAACCAGCACCG+CGG 0.760566 3.1:+17214329 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTTTTTCTATATAAATTA+AGG - chr3.1:17212479-17212498 MS.gene79365:CDS 10.0%
!! AAAATTTATTTCGAAATCCT+TGG + chr3.1:17213858-17213877 None:intergenic 20.0%
!! CATGCAAATACAAATTATTT+GGG + chr3.1:17214277-17214296 None:intergenic 20.0%
!! GAATTAAATTTAGGTAAATC+AGG + chr3.1:17213010-17213029 None:intergenic 20.0%
!! TCATGCAAATACAAATTATT+TGG + chr3.1:17214278-17214297 None:intergenic 20.0%
!! TGCAAAAATAAAGTAAAATC+AGG + chr3.1:17212190-17212209 None:intergenic 20.0%
!! TTCAGAAGTTTGATAAATTT+AGG - chr3.1:17212218-17212237 MS.gene79365:CDS 20.0%
!! TTTACCTTTGATATGAATTA+GGG - chr3.1:17213386-17213405 MS.gene79365:CDS 20.0%
!!! AATGACTTTTGTAAATCAAT+GGG + chr3.1:17213260-17213279 None:intergenic 20.0%
!!! ATAACTGCAATTTTTTTTCA+TGG + chr3.1:17212684-17212703 None:intergenic 20.0%
!!! ATTTGTAGCTAAATTTTTGT+AGG - chr3.1:17213482-17213501 MS.gene79365:intron 20.0%
!!! TAACTGCAATTTTTTTTCAT+GGG + chr3.1:17212683-17212702 None:intergenic 20.0%
!!! TAATGACTTTTGTAAATCAA+TGG + chr3.1:17213261-17213280 None:intergenic 20.0%
!!! TTTCGAAATAAATTTTTTCC+CGG - chr3.1:17213862-17213881 MS.gene79365:intron 20.0%
!!! TTTTACCTTTGATATGAATT+AGG - chr3.1:17213385-17213404 MS.gene79365:CDS 20.0%
! ATAATGCTTCAAAATCTGTT+AGG - chr3.1:17214472-17214491 MS.gene79365:CDS 25.0%
! GTTACAAAGAAATCACAATT+AGG + chr3.1:17214350-17214369 None:intergenic 25.0%
! TAATCTTTCTGTCTGATATT+AGG + chr3.1:17213462-17213481 None:intergenic 25.0%
! TATTACTGCTTGAATATGTT+AGG - chr3.1:17212892-17212911 MS.gene79365:intron 25.0%
!!! ATAAATTTTTTCCCGGATAA+AGG - chr3.1:17213869-17213888 MS.gene79365:intron 25.0%
!!! TTGTTGGTACTAACATTTTT+TGG + chr3.1:17213761-17213780 None:intergenic 25.0%
AAACAAATCTCAACATACCT+CGG + chr3.1:17212464-17212483 None:intergenic 30.0%
AAATCTGTTAGGTCAAGAAA+TGG - chr3.1:17214483-17214502 MS.gene79365:CDS 30.0%
AAATGTTAGTACCAACAAAG+TGG - chr3.1:17213763-17213782 MS.gene79365:intron 30.0%
AAGTCTTAAATGGAAACTAC+CGG - chr3.1:17212981-17213000 MS.gene79365:intron 30.0%
AGAAGTCATTAATGAGAAAG+TGG - chr3.1:17212782-17212801 MS.gene79365:CDS 30.0%
AGAATCACTAGTATTGTTAC+CGG + chr3.1:17212128-17212147 None:intergenic 30.0%
AGCAATCAATCACTGATATT+GGG - chr3.1:17213188-17213207 MS.gene79365:intron 30.0%
ATTTAGGTAAATCAGGAATC+CGG + chr3.1:17213003-17213022 None:intergenic 30.0%
GCAAATACAAATTATTTGGG+AGG + chr3.1:17214274-17214293 None:intergenic 30.0%
GTGAGGGTTGAATTAAATTT+AGG + chr3.1:17213019-17213038 None:intergenic 30.0%
TAATGAGAAAGTGGACATAT+GGG - chr3.1:17212791-17212810 MS.gene79365:CDS 30.0%
TCTCATTAATGACTTCTTTC+AGG + chr3.1:17212779-17212798 None:intergenic 30.0%
TCTGTAATGAAGTTGTTGAT+AGG - chr3.1:17211886-17211905 MS.gene79365:CDS 30.0%
TGTCACAAAATTCCATTACA+AGG + chr3.1:17211978-17211997 None:intergenic 30.0%
TTAATGAGAAAGTGGACATA+TGG - chr3.1:17212790-17212809 MS.gene79365:CDS 30.0%
TTTGCCCTAATTCATATCAA+AGG + chr3.1:17213393-17213412 None:intergenic 30.0%
! AAAAGCTTTTGGTAGAAGAT+TGG - chr3.1:17213416-17213435 MS.gene79365:CDS 30.0%
! AAATTTAGGACGAGTTTGTA+AGG - chr3.1:17212232-17212251 MS.gene79365:CDS 30.0%
! ACTTCAAAAGTGCATTTGAT+GGG - chr3.1:17212945-17212964 MS.gene79365:intron 30.0%
! TACTTCAAAAGTGCATTTGA+TGG - chr3.1:17212944-17212963 MS.gene79365:intron 30.0%
! TTATGGAAGTTGTGTGATTT+TGG - chr3.1:17212340-17212359 MS.gene79365:CDS 30.0%
! TTTTCATGGGCACAAAAAAT+GGG + chr3.1:17212670-17212689 None:intergenic 30.0%
! TTTTGTGTGCATTTAGATGT+GGG - chr3.1:17212746-17212765 MS.gene79365:CDS 30.0%
! TTTTTCATGGGCACAAAAAA+TGG + chr3.1:17212671-17212690 None:intergenic 30.0%
!! CAACAAAAGTGTTAAAAGAC+TGG + chr3.1:17213952-17213971 None:intergenic 30.0%
!! CTTTATTGCAACTACTTTTG+TGG - chr3.1:17212842-17212861 MS.gene79365:CDS 30.0%
AAAAGAGGCTTTCCTTGTAA+TGG - chr3.1:17211963-17211982 MS.gene79365:CDS 35.0%
AAAGCGGAAAATCTTCTGTT+GGG - chr3.1:17212307-17212326 MS.gene79365:CDS 35.0%
AACAAATCTCAACATACCTC+GGG + chr3.1:17212463-17212482 None:intergenic 35.0%
ACTGTAAAAAGCAGTACACA+TGG - chr3.1:17213803-17213822 MS.gene79365:intron 35.0%
ATAAATTAAGGTGAGCACCA+AGG - chr3.1:17212491-17212510 MS.gene79365:CDS 35.0%
CCATTCATCTCCATCAATTT+AGG - chr3.1:17213118-17213137 MS.gene79365:CDS 35.0%
CCTAAATTGATGGAGATGAA+TGG + chr3.1:17213121-17213140 None:intergenic 35.0%
CTATGACCAACCTAAATTGA+TGG + chr3.1:17213131-17213150 None:intergenic 35.0%
CTCAAAACGTTTGTGATTTG+TGG + chr3.1:17212374-17212393 None:intergenic 35.0%
CTGTAAAAAGCAGTACACAT+GGG - chr3.1:17213804-17213823 MS.gene79365:intron 35.0%
CTTGAATATGTTAGGCACTT+GGG - chr3.1:17212900-17212919 MS.gene79365:intron 35.0%
GAGCAATCAATCACTGATAT+TGG - chr3.1:17213187-17213206 MS.gene79365:intron 35.0%
GATTTCTTTGTAACTTCAGC+AGG - chr3.1:17214356-17214375 MS.gene79365:CDS 35.0%
GCTAATGCCATCTATGATAT+GGG - chr3.1:17211934-17211953 MS.gene79365:CDS 35.0%
TAAATTAAGGTGAGCACCAA+GGG - chr3.1:17212492-17212511 MS.gene79365:CDS 35.0%
TACAAAAGTCATTACCTGAC+AGG - chr3.1:17213267-17213286 MS.gene79365:intron 35.0%
TCAAAGCTCCAAGTCTTAAA+TGG - chr3.1:17212971-17212990 MS.gene79365:intron 35.0%
TCATCTCCATCAATTTAGGT+TGG - chr3.1:17213122-17213141 MS.gene79365:CDS 35.0%
TCATTTGCATGACCTTTATC+CGG + chr3.1:17213884-17213903 None:intergenic 35.0%
TCTGCTGAAAGGGATTTAAA+CGG + chr3.1:17214453-17214472 None:intergenic 35.0%
TGAGAAGCAAATGTCAAATC+TGG - chr3.1:17213901-17213920 MS.gene79365:intron 35.0%
TGATATTGGGTATTCTTCCA+TGG - chr3.1:17213201-17213220 MS.gene79365:intron 35.0%
TGCATTACCTTCATGATTGT+TGG + chr3.1:17213312-17213331 None:intergenic 35.0%
TGCTAATGCCATCTATGATA+TGG - chr3.1:17211933-17211952 MS.gene79365:CDS 35.0%
TTCGCACATAAAGAGCAAAA+TGG - chr3.1:17211682-17211701 MS.gene79365:CDS 35.0%
TTTGAGAAGCCAGAAGAAAT+GGG - chr3.1:17212388-17212407 MS.gene79365:CDS 35.0%
! AAAGAGCAAAATGGTCTTGA+AGG - chr3.1:17211691-17211710 MS.gene79365:CDS 35.0%
! AGCAGTAAGCTTTTCATACT+TGG + chr3.1:17214107-17214126 None:intergenic 35.0%
! AGGGCAAAGAAAAAAGCTTT+TGG - chr3.1:17213405-17213424 MS.gene79365:CDS 35.0%
! CTTCAAAAGTGCATTTGATG+GGG - chr3.1:17212946-17212965 MS.gene79365:intron 35.0%
! GCAGGTTCTTTTAATCTTCA+GGG - chr3.1:17212050-17212069 MS.gene79365:intron 35.0%
! GGTAGTTTCCATTTAAGACT+TGG + chr3.1:17212982-17213001 None:intergenic 35.0%
! GTTTTGTGTGCATTTAGATG+TGG - chr3.1:17212745-17212764 MS.gene79365:CDS 35.0%
! TGAAGCATTATCTGCTGAAA+GGG + chr3.1:17214463-17214482 None:intergenic 35.0%
! TTGAAGCATTATCTGCTGAA+AGG + chr3.1:17214464-17214483 None:intergenic 35.0%
! TTTGGTAACTGATCATTGTC+CGG + chr3.1:17213743-17213762 None:intergenic 35.0%
! TTTTGCTCTTTATGTGCGAA+TGG + chr3.1:17211682-17211701 None:intergenic 35.0%
!! CATTGGACTTGATTTGTTTG+TGG + chr3.1:17213519-17213538 None:intergenic 35.0%
!! TTTTGAGAAGCCAGAAGAAA+TGG - chr3.1:17212387-17212406 MS.gene79365:CDS 35.0%
!!! AGCTGCTGATTTTGATTCTT+GGG - chr3.1:17214533-17214552 MS.gene79365:CDS 35.0%
!!! GATTTTGATTCTTGGGGTTT+TGG - chr3.1:17214540-17214559 MS.gene79365:CDS 35.0%
AAAGGTTGCCATGATGACTT+TGG + chr3.1:17214414-17214433 None:intergenic 40.0%
AAATCAACTTCTCAACCTGC+TGG - chr3.1:17214672-17214691 MS.gene79365:CDS 40.0%
AATCTTCTGTTGGGTTCAGA+TGG - chr3.1:17212316-17212335 MS.gene79365:CDS 40.0%
ACAAATCTCAACATACCTCG+GGG + chr3.1:17212462-17212481 None:intergenic 40.0%
ACCTTCATGATTGTTGGAAG+AGG + chr3.1:17213306-17213325 None:intergenic 40.0%
AGTTGCATCATCTGCATCTT+TGG - chr3.1:17214225-17214244 MS.gene79365:intron 40.0%
ATGCCATCTATGATATGGGT+AGG - chr3.1:17211938-17211957 MS.gene79365:CDS 40.0%
ATTGTTGGAAGAGGGTGATT+CGG + chr3.1:17213297-17213316 None:intergenic 40.0%
CAAGAATCAAAATCAGCAGC+TGG + chr3.1:17214534-17214553 None:intergenic 40.0%
CATTTGCATGACCTTTATCC+GGG + chr3.1:17213883-17213902 None:intergenic 40.0%
CCTTCATGATTGTTGGAAGA+GGG + chr3.1:17213305-17213324 None:intergenic 40.0%
CGATGAAGAATCACTTGGAT+TGG - chr3.1:17211849-17211868 MS.gene79365:CDS 40.0%
GAAAGCGGAAAATCTTCTGT+TGG - chr3.1:17212306-17212325 MS.gene79365:CDS 40.0%
GCAATTCTTGCCTTTGTGAA+CGG + chr3.1:17214135-17214154 None:intergenic 40.0%
GCATGAAGTGTGACAACATT+AGG + chr3.1:17211916-17211935 None:intergenic 40.0%
GCATGGTAACAAATCCACAA+GGG - chr3.1:17214003-17214022 MS.gene79365:CDS 40.0%
GCTTGAATATGTTAGGCACT+TGG - chr3.1:17212899-17212918 MS.gene79365:intron 40.0%
GGTCGTTCTTCATCATATAC+AGG + chr3.1:17213701-17213720 None:intergenic 40.0%
GTTCAGAACCAAAGTCATCA+TGG - chr3.1:17214403-17214422 MS.gene79365:CDS 40.0%
GTTTCTCAGAGACTTGAAAG+CGG - chr3.1:17212291-17212310 MS.gene79365:CDS 40.0%
TACGTTGTGTTTGTGACACA+TGG - chr3.1:17214309-17214328 MS.gene79365:CDS 40.0%
TATTGGGTATTCTTCCATGG+TGG - chr3.1:17213204-17213223 MS.gene79365:intron 40.0%
TATTGTTACCGGTGAGCAAT+AGG + chr3.1:17212117-17212136 None:intergenic 40.0%
TGATATGGGTAGGACAAAAG+AGG - chr3.1:17211948-17211967 MS.gene79365:CDS 40.0%
TGCAACGATGAAGAATCACT+TGG - chr3.1:17211844-17211863 MS.gene79365:CDS 40.0%
TGCTCTAATTCTAGTGCCTA+TGG + chr3.1:17213172-17213191 None:intergenic 40.0%
TGTCCTACCCATATCATAGA+TGG + chr3.1:17211944-17211963 None:intergenic 40.0%
TGTTGGGTTCAGATGGTTTA+TGG - chr3.1:17212323-17212342 MS.gene79365:CDS 40.0%
TTCACAAAGGCAAGAATTGC+AGG - chr3.1:17214135-17214154 MS.gene79365:intron 40.0%
TTCAGCAGGATAGAAGTGAA+TGG - chr3.1:17214370-17214389 MS.gene79365:CDS 40.0%
! GCACATAGTGTTCGAGTTTA+TGG + chr3.1:17212597-17212616 None:intergenic 40.0%
! GGAATTTTGTGACAAGTCTC+TGG - chr3.1:17211984-17212003 MS.gene79365:intron 40.0%
! GGCAGGTTCTTTTAATCTTC+AGG - chr3.1:17212049-17212068 MS.gene79365:intron 40.0%
! GGGAGTAAAGCTCATGTTTT+CGG - chr3.1:17214627-17214646 MS.gene79365:CDS 40.0%
! TAAAGCTCATGTTTTCGGTG+AGG - chr3.1:17214632-17214651 MS.gene79365:CDS 40.0%
!! GATGACTTTGGTTCTGAACT+AGG + chr3.1:17214402-17214421 None:intergenic 40.0%
!!! CAGCTGCTGATTTTGATTCT+TGG - chr3.1:17214532-17214551 MS.gene79365:CDS 40.0%
!!! GCTGCTGATTTTGATTCTTG+GGG - chr3.1:17214534-17214553 MS.gene79365:CDS 40.0%
!!! GTGCTGGTTATTTTGAAGAG+AGG - chr3.1:17212028-17212047 MS.gene79365:intron 40.0%
!!! TGGTTATTTTGAAGAGAGGC+AGG - chr3.1:17212032-17212051 MS.gene79365:intron 40.0%
AAACCCTCTCTACTTGGAGA+TGG + chr3.1:17214190-17214209 None:intergenic 45.0%
AAATCTCAACATACCTCGGG+GGG + chr3.1:17212460-17212479 None:intergenic 45.0%
AACTCCATCTCCAAGTAGAG+AGG - chr3.1:17214183-17214202 MS.gene79365:intron 45.0%
AACTTCTCAACCTGCTGGAT+GGG - chr3.1:17214677-17214696 MS.gene79365:CDS 45.0%
ACAAGCTCATTGCTGAAGGA+GGG - chr3.1:17211752-17211771 MS.gene79365:CDS 45.0%
ACTATGTGCATCTGAATGCC+AGG - chr3.1:17212608-17212627 MS.gene79365:CDS 45.0%
ACTCCATCTCCAAGTAGAGA+GGG - chr3.1:17214184-17214203 MS.gene79365:intron 45.0%
AGCACTCGAATAACTTCGCA+CGG + chr3.1:17212538-17212557 None:intergenic 45.0%
AGGGTTCTCATGTGTCTACT+TGG - chr3.1:17211771-17211790 MS.gene79365:CDS 45.0%
ATACCGCTAAGCTAAACTCC+GGG - chr3.1:17213981-17214000 MS.gene79365:CDS 45.0%
CAAATCTCAACATACCTCGG+GGG + chr3.1:17212461-17212480 None:intergenic 45.0%
CAATCTCATTGTCGTAGAGC+TGG - chr3.1:17212564-17212583 MS.gene79365:CDS 45.0%
CATCCATCCATAGCATCCAT+AGG - chr3.1:17213153-17213172 MS.gene79365:intron 45.0%
CCCTCTTCCAACAATCATGA+AGG - chr3.1:17213302-17213321 MS.gene79365:CDS 45.0%
CTCTAATGCTTCTTCCCTTG+TGG + chr3.1:17214020-17214039 None:intergenic 45.0%
CTTCAAAATAACCAGCACCG+CGG + chr3.1:17212026-17212045 None:intergenic 45.0%
GAAGGTCGTTCTATAGACGT+TGG - chr3.1:17211709-17211728 MS.gene79365:CDS 45.0%
GAGCTTTCAAACACATCCCT+TGG + chr3.1:17212511-17212530 None:intergenic 45.0%
GATACCGCTAAGCTAAACTC+CGG - chr3.1:17213980-17213999 MS.gene79365:CDS 45.0%
GCACAAAAAATGGGAACCCA+AGG + chr3.1:17212661-17212680 None:intergenic 45.0%
GCGAAGTTATTCGAGTGCTT+AGG - chr3.1:17212539-17212558 MS.gene79365:CDS 45.0%
GGCATGGTAACAAATCCACA+AGG - chr3.1:17214002-17214021 MS.gene79365:CDS 45.0%
GTCATCATGGCAACCTTTCT+CGG - chr3.1:17214416-17214435 MS.gene79365:CDS 45.0%
GTCTCTGATCAAGTCTGTGA+GGG + chr3.1:17213035-17213054 None:intergenic 45.0%
TAGAAGCAAGAGATGGCTGA+GGG + chr3.1:17213592-17213611 None:intergenic 45.0%
TATGTCCTGGCTACAACCTT+GGG - chr3.1:17212642-17212661 MS.gene79365:CDS 45.0%
TCAGCCATCTCTTGCTTCTA+GGG - chr3.1:17213592-17213611 MS.gene79365:CDS 45.0%
TCCTCGATTCCCATTTCTTC+TGG + chr3.1:17212400-17212419 None:intergenic 45.0%
TCTAGTGCCTATGGATGCTA+TGG + chr3.1:17213163-17213182 None:intergenic 45.0%
TGAATCCTTTGCATGCAGAG+TGG + chr3.1:17213654-17213673 None:intergenic 45.0%
TGTCTCTGATCAAGTCTGTG+AGG + chr3.1:17213036-17213055 None:intergenic 45.0%
TTGTTGGAAGAGGGTGATTC+GGG + chr3.1:17213296-17213315 None:intergenic 45.0%
! CATGTTTTCGGTGAGGCAAA+GGG - chr3.1:17214639-17214658 MS.gene79365:CDS 45.0%
! CTGTGTGTTAGCCACTTTGT+TGG + chr3.1:17213777-17213796 None:intergenic 45.0%
! TCATGTTTTCGGTGAGGCAA+AGG - chr3.1:17214638-17214657 MS.gene79365:CDS 45.0%
!! AGAAGCATTAGAGTCTGAGG+TGG - chr3.1:17214027-17214046 MS.gene79365:CDS 45.0%
!! GGAAGAAGCATTAGAGTCTG+AGG - chr3.1:17214024-17214043 MS.gene79365:CDS 45.0%
!! GTTCTGAAACCCTCTCTACT+TGG + chr3.1:17214196-17214215 None:intergenic 45.0%
!! TGTGGATTTGTTACCATGCC+CGG + chr3.1:17214002-17214021 None:intergenic 45.0%
AAAGGATTCACGTGTCCCTG+AGG - chr3.1:17213664-17213683 MS.gene79365:intron 50.0%
AAATCCACCTCCTCCTCCAT+CGG - chr3.1:17213547-17213566 MS.gene79365:intron 50.0%
ACCTGAAGCTGCATCTTCCA+AGG - chr3.1:17213838-17213857 MS.gene79365:intron 50.0%
AGAAGCAAGAGATGGCTGAG+GGG + chr3.1:17213591-17213610 None:intergenic 50.0%
AGATGATGCAACTCCAGGAG+AGG + chr3.1:17214218-17214237 None:intergenic 50.0%
AGATGCCAAGACCTGGTGAA+GGG - chr3.1:17214607-17214626 MS.gene79365:CDS 50.0%
AGGCAAGCGCTTTGCTTGAT+TGG - chr3.1:17213095-17213114 MS.gene79365:CDS 50.0%
ATCATGGCAACCTTTCTCGG+AGG - chr3.1:17214419-17214438 MS.gene79365:CDS 50.0%
CAACTTCTCAACCTGCTGGA+TGG - chr3.1:17214676-17214695 MS.gene79365:CDS 50.0%
CAAGTCTCTGGTTAGTGTGC+TGG - chr3.1:17211996-17212015 MS.gene79365:intron 50.0%
CACAAGCTCATTGCTGAAGG+AGG - chr3.1:17211751-17211770 MS.gene79365:CDS 50.0%
CAGCCATCTCTTGCTTCTAG+GGG - chr3.1:17213593-17213612 MS.gene79365:CDS 50.0%
CTAGAAGCAAGAGATGGCTG+AGG + chr3.1:17213593-17213612 None:intergenic 50.0%
CTCAGCCATCTCTTGCTTCT+AGG - chr3.1:17213591-17213610 MS.gene79365:CDS 50.0%
CTCCTTCAGCAATGAGCTTG+TGG + chr3.1:17211753-17211772 None:intergenic 50.0%
CTGCTATCTGCCGTTCACAA+AGG - chr3.1:17214122-17214141 MS.gene79365:intron 50.0%
GAAACTCAGAGAGCAGCTGA+AGG - chr3.1:17214051-17214070 MS.gene79365:CDS 50.0%
GATGCAGATGATGCAACTCC+AGG + chr3.1:17214223-17214242 None:intergenic 50.0%
GCACTCGAATAACTTCGCAC+GGG + chr3.1:17212537-17212556 None:intergenic 50.0%
GCCAGAAGAAATGGGAATCG+AGG - chr3.1:17212396-17212415 MS.gene79365:CDS 50.0%
GGTTCAGTTTCCTCCGAGAA+AGG + chr3.1:17214432-17214451 None:intergenic 50.0%
GTATGTCCTGGCTACAACCT+TGG - chr3.1:17212641-17212660 MS.gene79365:CDS 50.0%
GTCCACAAGCTCATTGCTGA+AGG - chr3.1:17211748-17211767 MS.gene79365:CDS 50.0%
GTGATATCTGGTCTGTCGTC+TGG + chr3.1:17213073-17213092 None:intergenic 50.0%
GTGCCTATGGATGCTATGGA+TGG + chr3.1:17213159-17213178 None:intergenic 50.0%
TAAAAACCAGCCCATCCAGC+AGG + chr3.1:17214690-17214709 None:intergenic 50.0%
TCACGTGTCCCTGAGGAAAA+GGG - chr3.1:17213671-17213690 MS.gene79365:intron 50.0%
TCAGCAGCTGGTTGAATAGC+TGG + chr3.1:17214522-17214541 None:intergenic 50.0%
TCCTTGGAAGATGCAGCTTC+AGG + chr3.1:17213842-17213861 None:intergenic 50.0%
TCTCATTGTCGTAGAGCTGG+TGG - chr3.1:17212567-17212586 MS.gene79365:CDS 50.0%
TGAGCTTTACTCCCTTCACC+AGG + chr3.1:17214621-17214640 None:intergenic 50.0%
TGTTACCGGTGAGCAATAGG+CGG + chr3.1:17212114-17212133 None:intergenic 50.0%
TTACTCCCTTCACCAGGTCT+TGG + chr3.1:17214615-17214634 None:intergenic 50.0%
TTCACGTGTCCCTGAGGAAA+AGG - chr3.1:17213670-17213689 MS.gene79365:intron 50.0%
TTCTTCCATGGTGGCAGGTT+TGG - chr3.1:17213213-17213232 MS.gene79365:intron 50.0%
! AGATGGCTGAGGGGTAGTTT+TGG + chr3.1:17213582-17213601 None:intergenic 50.0%
! ATCTCTTGCTTCTAGGGGAG+GGG - chr3.1:17213598-17213617 MS.gene79365:intron 50.0%
! ATGCCCGGAGTTTAGCTTAG+CGG + chr3.1:17213987-17214006 None:intergenic 50.0%
! CATCTCTTGCTTCTAGGGGA+GGG - chr3.1:17213597-17213616 MS.gene79365:intron 50.0%
! GATGGCTGAGGGGTAGTTTT+GGG + chr3.1:17213581-17213600 None:intergenic 50.0%
!!! GTTTTGGGTTCTGCAACCGA+TGG + chr3.1:17213566-17213585 None:intergenic 50.0%
ACATTTAGTGCTGCCCGTGC+TGG - chr3.1:17214570-17214589 MS.gene79365:CDS 55.0%
CACCAGGTCTTGGCATCTGT+GGG + chr3.1:17214605-17214624 None:intergenic 55.0%
CAGATGCCAAGACCTGGTGA+AGG - chr3.1:17214606-17214625 MS.gene79365:CDS 55.0%
CATTGTCCGGACGAACTCTG+TGG + chr3.1:17213730-17213749 None:intergenic 55.0%
CCTCCCCTAGAAGCAAGAGA+TGG + chr3.1:17213599-17213618 None:intergenic 55.0%
CGAAACCAAACCTGCCACCA+TGG + chr3.1:17213221-17213240 None:intergenic 55.0%
CGACAGACCAGATATCACGC+AGG - chr3.1:17213075-17213094 MS.gene79365:CDS 55.0%
CTGGTCCACTCTGCATGCAA+AGG - chr3.1:17213646-17213665 MS.gene79365:intron 55.0%
GAGGGTTTCAGAACCTCTCC+TGG - chr3.1:17214202-17214221 MS.gene79365:intron 55.0%
GCTAAGCTAAACTCCGGGCA+TGG - chr3.1:17213986-17214005 MS.gene79365:CDS 55.0%
GGACAATGCCTCGTATGTCC+TGG - chr3.1:17212629-17212648 MS.gene79365:CDS 55.0%
GGGTATTCTTCCATGGTGGC+AGG - chr3.1:17213208-17213227 MS.gene79365:intron 55.0%
GGTTGTAGCCAGGACATACG+AGG + chr3.1:17212640-17212659 None:intergenic 55.0%
GTTACCGGTGAGCAATAGGC+GGG + chr3.1:17212113-17212132 None:intergenic 55.0%
TAGCCACCACAGAGTTCGTC+CGG - chr3.1:17213721-17213740 MS.gene79365:intron 55.0%
TCACCAGGTCTTGGCATCTG+TGG + chr3.1:17214606-17214625 None:intergenic 55.0%
TTACCGGTGAGCAATAGGCG+GGG + chr3.1:17212112-17212131 None:intergenic 55.0%
TTGGGTTCTGCAACCGATGG+AGG + chr3.1:17213563-17213582 None:intergenic 55.0%
! ACAGGCTTGCCCTTTTCCTC+AGG + chr3.1:17213683-17213702 None:intergenic 55.0%
! CAGGCTTGCCCTTTTCCTCA+GGG + chr3.1:17213682-17213701 None:intergenic 55.0%
! CCATCTCTTGCTTCTAGGGG+AGG - chr3.1:17213596-17213615 MS.gene79365:intron 55.0%
! CTTCTAGGGGAGGGGAAAGT+GGG - chr3.1:17213606-17213625 MS.gene79365:intron 55.0%
! GGTGGATTTCTGCGAGGCAT+TGG + chr3.1:17213536-17213555 None:intergenic 55.0%
! TCTTGGCATCTGTGGGCTAC+CGG + chr3.1:17214598-17214617 None:intergenic 55.0%
! TTCTAGGGGAGGGGAAAGTG+GGG - chr3.1:17213607-17213626 MS.gene79365:intron 55.0%
! TTGGAAGAGGGTGATTCGGG+TGG + chr3.1:17213293-17213312 None:intergenic 55.0%
!! GGACATACGAGGCATTGTCC+TGG + chr3.1:17212629-17212648 None:intergenic 55.0%
ACATACCTCGGGGGGTCTGT+AGG + chr3.1:17212452-17212471 None:intergenic 60.0%
AGCCCACAGATGCCAAGACC+TGG - chr3.1:17214600-17214619 MS.gene79365:CDS 60.0%
AGTCCCCGCCTATTGCTCAC+CGG - chr3.1:17212106-17212125 MS.gene79365:intron 60.0%
GCGCTTGCCTGCGTGATATC+TGG + chr3.1:17213085-17213104 None:intergenic 60.0%
GGACGAACTCTGTGGTGGCT+AGG + chr3.1:17213722-17213741 None:intergenic 60.0%
GGGAACCCAAGGTTGTAGCC+AGG + chr3.1:17212650-17212669 None:intergenic 60.0%
GGTTCTGCAACCGATGGAGG+AGG + chr3.1:17213560-17213579 None:intergenic 60.0%
GTTAGTGTGCTGGAGAGCCG+CGG - chr3.1:17212006-17212025 MS.gene79365:intron 60.0%
TCTAGGGGAGGGGAAAGTGG+GGG - chr3.1:17213608-17213627 MS.gene79365:intron 60.0%
TCTCAACCTGCTGGATGGGC+TGG - chr3.1:17214681-17214700 MS.gene79365:CDS 60.0%
TCTGCAACCGATGGAGGAGG+AGG + chr3.1:17213557-17213576 None:intergenic 60.0%
TGTCCGGACGAACTCTGTGG+TGG + chr3.1:17213727-17213746 None:intergenic 60.0%
! GCTTCTAGGGGAGGGGAAAG+TGG - chr3.1:17213605-17213624 MS.gene79365:intron 60.0%
! GGAGGAGGTGGATTTCTGCG+AGG + chr3.1:17213542-17213561 None:intergenic 60.0%
CTAGGGGAGGGGAAAGTGGG+GGG - chr3.1:17213609-17213628 MS.gene79365:intron 65.0%
GCAACCGATGGAGGAGGAGG+TGG + chr3.1:17213554-17213573 None:intergenic 65.0%
GGTGAGCAATAGGCGGGGAC+TGG + chr3.1:17212107-17212126 None:intergenic 65.0%
TGGGCTACCGGTACCAGCAC+GGG + chr3.1:17214586-17214605 None:intergenic 65.0%
! AGTGCTGCCCGTGCTGGTAC+CGG - chr3.1:17214576-17214595 MS.gene79365:CDS 65.0%
! GGTGATTCGGGTGGCCTGTC+AGG + chr3.1:17213284-17213303 None:intergenic 65.0%
! GTGGGCTACCGGTACCAGCA+CGG + chr3.1:17214587-17214606 None:intergenic 65.0%
!! GGGGGCAGCTTGGTGCTTTC+TGG - chr3.1:17213627-17213646 MS.gene79365:intron 65.0%
ACCTCGGGGGGTCTGTAGGC+AGG + chr3.1:17212448-17212467 None:intergenic 70.0%
CCTCGGGGGGTCTGTAGGCA+GGG + chr3.1:17212447-17212466 None:intergenic 70.0%
CTCGGGGGGTCTGTAGGCAG+GGG + chr3.1:17212446-17212465 None:intergenic 70.0%
GGGGAAAGTGGGGGGCAGCT+TGG - chr3.1:17213617-17213636 MS.gene79365:intron 70.0%
! AGGCGGGGACTGGCAGTGCA+TGG + chr3.1:17212097-17212116 None:intergenic 70.0%
CCCTGCCTACAGACCCCCCG+AGG - chr3.1:17212444-17212463 MS.gene79365:CDS 75.0%
GTGCTGGAGAGCCGCGGTGC+TGG - chr3.1:17212012-17212031 MS.gene79365:intron 75.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 17211664 17214710 17211664 ID=MS.gene79365
chr3.1 mRNA 17211664 17214710 17211664 ID=MS.gene79365.t1;Parent=MS.gene79365
chr3.1 exon 17214247 17214710 17214247 ID=MS.gene79365.t1.exon1;Parent=MS.gene79365.t1
chr3.1 CDS 17214247 17214710 17214247 ID=cds.MS.gene79365.t1;Parent=MS.gene79365.t1
chr3.1 exon 17213909 17214074 17213909 ID=MS.gene79365.t1.exon2;Parent=MS.gene79365.t1
chr3.1 CDS 17213909 17214074 17213909 ID=cds.MS.gene79365.t1;Parent=MS.gene79365.t1
chr3.1 exon 17213562 17213612 17213562 ID=MS.gene79365.t1.exon3;Parent=MS.gene79365.t1
chr3.1 CDS 17213562 17213612 17213562 ID=cds.MS.gene79365.t1;Parent=MS.gene79365.t1
chr3.1 exon 17213278 17213460 17213278 ID=MS.gene79365.t1.exon4;Parent=MS.gene79365.t1
chr3.1 CDS 17213278 17213460 17213278 ID=cds.MS.gene79365.t1;Parent=MS.gene79365.t1
chr3.1 exon 17213051 17213144 17213051 ID=MS.gene79365.t1.exon5;Parent=MS.gene79365.t1
chr3.1 CDS 17213051 17213144 17213051 ID=cds.MS.gene79365.t1;Parent=MS.gene79365.t1
chr3.1 exon 17212128 17212870 17212128 ID=MS.gene79365.t1.exon6;Parent=MS.gene79365.t1
chr3.1 CDS 17212128 17212870 17212128 ID=cds.MS.gene79365.t1;Parent=MS.gene79365.t1
chr3.1 exon 17211664 17211999 17211664 ID=MS.gene79365.t1.exon7;Parent=MS.gene79365.t1
chr3.1 CDS 17211664 17211999 17211664 ID=cds.MS.gene79365.t1;Parent=MS.gene79365.t1
Gene Sequence

>MS.gene79365

ATGTGGAAATTTAAGCCATTCGCACATAAAGAGCAAAATGGTCTTGAAGGTCGTTCTATAGACGTTGGTAATCTCAAACTACATGTCCACAAGCTCATTGCTGAAGGAGGGTTCTCATGTGTCTACTTGGCTCGTGATGCTGTACATATGTCGAAACAGTATGCTTTGAAGCACATAATATGCAACGATGAAGAATCACTTGGATTGGTGAAGAAAGAGATATCTGTAATGAAGTTGTTGATAGGACATCCTAATGTTGTCACACTTCATGCTAATGCCATCTATGATATGGGTAGGACAAAAGAGGCTTTCCTTGTAATGGAATTTTGTGACAAGTCTCTGGTTAGTGTGCTGGAGAGCCGCGGTGCTGGTTATTTTGAAGAGAGGCAGGTTCTTTTAATCTTCAGGGATGTGTGTAATGCAGTCTTCGCCATGCACTGCCAGTCCCCGCCTATTGCTCACCGGTAACAATACTAGTGATTCTTCTTTAAATATGTTTATTTGAATTGTACTGCTTGATATGCCTGATTTTACTTTATTTTTGCATGACATTGTTCAGAAGTTTGATAAATTTAGGACGAGTTTGTAAGGTACTTTTAGAATTATTCATAAATCACTTTTCTTTTTGTTTCTCAGAGACTTGAAAGCGGAAAATCTTCTGTTGGGTTCAGATGGTTTATGGAAGTTGTGTGATTTTGGAAGCATTTCCACAAATCACAAACGTTTTGAGAAGCCAGAAGAAATGGGAATCGAGGAAGATAATATCAGAAAGTACACAACCCCTGCCTACAGACCCCCCGAGGTATGTTGAGATTTGTTTTTTCTATATAAATTAAGGTGAGCACCAAGGGATGTGTTTGAAAGCTCTAGCCCGTGCGAAGTTATTCGAGTGCTTAGGTTCAATCTCATTGTCGTAGAGCTGGTGGAAAGCCATAAACTCGAACACTATGTGCATCTGAATGCCAGGACAATGCCTCGTATGTCCTGGCTACAACCTTGGGTTCCCATTTTTTGTGCCCATGAAAAAAAATTGCAGTTATGTATGATACAATTACAAATGAATGAATGATCACAAATTTTTGTTTTGTGTGCATTTAGATGTGGGATCTGTTCCTGAAAGAAGTCATTAATGAGAAAGTGGACATATGGGTAAGTCGTCGTATACGCTAATAACATCTCTTTATTGCAACTACTTTTGTGGAATCATTTTCTGCTAACTGACAAATCATATTACTGCTTGAATATGTTAGGCACTTGGGTGTCTTCTTTTTCGCATATGCTACTTCAAAAGTGCATTTGATGGGGAATCAAAGCTCCAAGTCTTAAATGGAAACTACCGGATTCCTGATTTACCTAAATTTAATTCAACCCTCACAGACTTGATCAGAGACATGCTTCAAGCTCGACCAGACGACAGACCAGATATCACGCAGGCAAGCGCTTTGCTTGATTGGCCATTCATCTCCATCAATTTAGGTTGGTCATAGATCATCCATCCATAGCATCCATAGGCACTAGAATTAGAGCAATCAATCACTGATATTGGGTATTCTTCCATGGTGGCAGGTTTGGTTTCGTGTTAATGAGCAGCTACCCATTGATTTACAAAAGTCATTACCTGACAGGCCACCCGAATCACCCTCTTCCAACAATCATGAAGGTAATGCATGTCTTCAATAATATGTCTATTTTAATGTTTTCTGAATGCTTAGATCATTAAATTTTACCTTTGATATGAATTAGGGCAAAGAAAAAAGCTTTTGGTAGAAGATTGGATTTGTATATTTTATTTTAACCTAATATCAGACAGAAAGATTAATTTGTAGCTAAATTTTTGTAGGTGCTTCAATGTCCACAAACAAATCAAGTCCAATGCCTCGCAGAAATCCACCTCCTCCTCCATCGGTTGCAGAACCCAAAACTACCCCTCAGCCATCTCTTGCTTCTAGGGGAGGGGAAAGTGGGGGGCAGCTTGGTGCTTTCTGGTCCACTCTGCATGCAAAGGATTCACGTGTCCCTGAGGAAAAGGGCAAGCCTGTATATGATGAAGAACGACCTAGCCACCACAGAGTTCGTCCGGACAATGATCAGTTACCAAAAAATGTTAGTACCAACAAAGTGGCTAACACACAGACTCAGACTGTAAAAAGCAGTACACATGGGAAGTTACACAAACCTGAAGCTGCATCTTCCAAGGATTTCGAAATAAATTTTTTCCCGGATAAAGGTCATGCAAATGAGAAGCAAATGTCAAATCTGGAGAAGAAAAATAATAATTTTCAAGACCAGTCTTTTAACACTTTTGTTGCAGAGTTTGATACCGCTAAGCTAAACTCCGGGCATGGTAACAAATCCACAAGGGAAGAAGCATTAGAGTCTGAGGTGGAGAAACTCAGAGAGCAGCTGAAGGAAGCTAACTTAGAGAAATCTGAAATCACTGCCAAGTATGAAAAGCTTACTGCTATCTGCCGTTCACAAAGGCAAGAATTGCAGGATCTCAAGCAAACACGTGCAGCAAAAACTCCATCTCCAAGTAGAGAGGGTTTCAGAACCTCTCCTGGAGTTGCATCATCTGCATCTTTGGTAATGAGCATTTTATAGTTTTTTCCTCCCAAATAATTTGTATTTGCATGAATTATTTTGTTTACGTTGTGTTTGTGACACATGGTTATATCTATGTCATCCTAATTGTGATTTCTTTGTAACTTCAGCAGGATAGAAGTGAATGGAAAACTCCTAGTTCAGAACCAAAGTCATCATGGCAACCTTTCTCGGAGGAAACTGAACCGTTTAAATCCCTTTCAGCAGATAATGCTTCAAAATCTGTTAGGTCAAGAAATGGTCAGCAGAACAAGCCAGCTATTCAACCAGCTGCTGATTTTGATTCTTGGGGTTTTGGCGCAGATACATTTAGTGCTGCCCGTGCTGGTACCGGTAGCCCACAGATGCCAAGACCTGGTGAAGGGAGTAAAGCTCATGTTTTCGGTGAGGCAAAGGGTTTTGAGAGCAAATCAACTTCTCAACCTGCTGGATGGGCTGGTTTTTAA
Protein sequence

>MS.gene79365.t1

MWKFKPFAHKEQNGLEGRSIDVGNLKLHVHKLIAEGGFSCVYLARDAVHMSKQYALKHIICNDEESLGLVKKEISVMKLLIGHPNVVTLHANAIYDMGRTKEAFLVMEFCDKSLVSVLESRGAGYFEERQVLLIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLGSDGLWKLCDFGSISTNHKRFEKPEEMGIEEDNIRKYTTPAYRPPEMWDLFLKEVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKFNSTLTDLIRDMLQARPDDRPDITQVWFRVNEQLPIDLQKSLPDRPPESPSSNNHEGASMSTNKSSPMPRRNPPPPPSVAEPKTTPQPSLASRGGESGGQLGAFWSTLHAKDSRVPEEKGKPVYDEERPSHHRVRPDNDQLPKNVSTNKVANTQTQTVKSSTHGKLHKPEAASSKDFEINFFPDKGHANEKQMSNLEKKNNNFQDQSFNTFVAEFDTAKLNSGHGNKSTREEALESEVEKLREQLKEANLEKSEITAKYEKLTAICRSQRQELQDLKQTRAAKTPSPSREGFRTSPGVASSASLQDRSEWKTPSSEPKSSWQPFSEETEPFKSLSADNASKSVRSRNGQQNKPAIQPAADFDSWGFGADTFSAARAGTGSPQMPRPGEGSKAHVFGEAKGFESKSTSQPAGWAGF