Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79455.t1 | XP_003630561.2 | 95.9 | 444 | 5 | 2 | 1 | 432 | 1 | 443 | 2.30E-244 | 854.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79455.t1 | Q8RY00 | 77.5 | 440 | 88 | 2 | 1 | 430 | 1 | 439 | 8.5e-203 | 707.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79455.t1 | G7LI40 | 95.9 | 444 | 5 | 2 | 1 | 432 | 1 | 443 | 1.7e-244 | 854.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene065390 | MS.gene79455 | PPI |
| MS.gene79455 | MS.gene033709 | PPI |
| MS.gene024277 | MS.gene79455 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79455.t1 | MTR_8g099840 | 95.946 | 444 | 5 | 2 | 1 | 432 | 1 | 443 | 0.0 | 875 |
| MS.gene79455.t1 | MTR_8g099840 | 94.524 | 347 | 6 | 2 | 1 | 335 | 1 | 346 | 0.0 | 676 |
| MS.gene79455.t1 | MTR_8g099840 | 93.258 | 267 | 5 | 2 | 1 | 255 | 1 | 266 | 5.83e-180 | 504 |
| MS.gene79455.t1 | MTR_7g084010 | 42.691 | 431 | 214 | 9 | 28 | 432 | 50 | 473 | 1.77e-112 | 338 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79455.t1 | AT3G48820 | 80.048 | 416 | 82 | 1 | 15 | 430 | 25 | 439 | 0.0 | 719 |
| MS.gene79455.t1 | AT3G48820 | 82.000 | 400 | 71 | 1 | 31 | 430 | 32 | 430 | 0.0 | 708 |
| MS.gene79455.t1 | AT1G08660 | 44.018 | 443 | 213 | 9 | 13 | 427 | 31 | 466 | 1.27e-120 | 360 |
| MS.gene79455.t1 | AT1G08660 | 50.625 | 320 | 150 | 5 | 13 | 331 | 31 | 343 | 4.80e-111 | 330 |
| MS.gene79455.t1 | AT1G08660 | 53.004 | 283 | 127 | 4 | 50 | 331 | 15 | 292 | 4.06e-106 | 316 |
Find 122 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAAGTATGGTGGTGTTTC+GGG | 0.164848 | 4.1:+6548464 | None:intergenic |
| GAAACCTTACCACACATTTC+TGG | 0.172341 | 4.1:+6549837 | None:intergenic |
| AGCTTCAAGTTCACCGGTTT+TGG | 0.180620 | 4.1:+6549526 | None:intergenic |
| ATCCAAACCGTGTGGTAAAA+TGG | 0.189886 | 4.1:-6547163 | MS.gene79455:CDS |
| CCAGTGACACCATTCCTAAA+TGG | 0.231814 | 4.1:-6549670 | MS.gene79455:CDS |
| TGCTAGCCGCCCTTATAATA+TGG | 0.234706 | 4.1:+6547129 | None:intergenic |
| TTAGGAATATTTACCCATTT+AGG | 0.252210 | 4.1:+6549656 | None:intergenic |
| TTTAGCTTGCTTCTTAACTA+TGG | 0.260463 | 4.1:+6546424 | None:intergenic |
| AGGGAAGTATGGTGGTGTTT+CGG | 0.267578 | 4.1:+6548463 | None:intergenic |
| CTGTGCTGTTATTGGTAATT+CGG | 0.288884 | 4.1:-6548426 | MS.gene79455:CDS |
| TTCAGTACGGTTCAATCATT+TGG | 0.313850 | 4.1:+6546274 | None:intergenic |
| GGTTCAGCTGCAAAAGGAAC+TGG | 0.314598 | 4.1:-6547837 | MS.gene79455:CDS |
| TTCATCAGTGAGGTGATAAC+TGG | 0.315515 | 4.1:+6549895 | None:intergenic |
| GATCTCTTGAAAACAAGATT+TGG | 0.317148 | 4.1:-6548401 | MS.gene79455:CDS |
| TTGTTGCTTGCTTTAGCATC+TGG | 0.335089 | 4.1:-6550065 | MS.gene79455:CDS |
| CCATACTTCCCTAGACAGTA+TGG | 0.349266 | 4.1:-6548452 | MS.gene79455:CDS |
| TTCATTGATTCTTTACCAAA+TGG | 0.360418 | 4.1:-6549237 | MS.gene79455:CDS |
| TATGGGCGCTGTGCTGTTAT+TGG | 0.363705 | 4.1:-6548434 | MS.gene79455:CDS |
| GATAAAGTTGTTGAATTAGA+TGG | 0.365529 | 4.1:-6548164 | MS.gene79455:intron |
| AGATATACAGGGTTTCTTAT+AGG | 0.378205 | 4.1:+6547879 | None:intergenic |
| CTCATGCTAGGTGCTTCCTT+TGG | 0.384537 | 4.1:-6547858 | MS.gene79455:CDS |
| CCATACTGTCTAGGGAAGTA+TGG | 0.392953 | 4.1:+6548452 | None:intergenic |
| TGTGCTGTTATTGGTAATTC+GGG | 0.400694 | 4.1:-6548425 | MS.gene79455:CDS |
| AACAACTTTATCCAGGGCTT+TGG | 0.405394 | 4.1:+6548175 | None:intergenic |
| TGCAAAAGGAACTGGGCTTA+AGG | 0.413825 | 4.1:-6547829 | MS.gene79455:CDS |
| TTCAATGAGGATTCTTCGAT+TGG | 0.415527 | 4.1:-6550090 | None:intergenic |
| GCACCTAGCATGAGATATAC+AGG | 0.415674 | 4.1:+6547867 | None:intergenic |
| TCCTTTGGTTCAGCTGCAAA+AGG | 0.423855 | 4.1:-6547843 | MS.gene79455:CDS |
| CTAATTCAACAACTTTATCC+AGG | 0.426379 | 4.1:+6548168 | None:intergenic |
| AGATTTGGAAAGGAGATAGA+TGG | 0.435574 | 4.1:-6548386 | MS.gene79455:CDS |
| GCAGAAACCGCTGCGAGAAC+AGG | 0.438906 | 4.1:-6548520 | MS.gene79455:intron |
| TATGATCAAGTGCTGCCTTT+CGG | 0.440437 | 4.1:+6546375 | None:intergenic |
| TCATTGATTCTTTACCAAAT+GGG | 0.440664 | 4.1:-6549236 | MS.gene79455:CDS |
| AGTGCAAAGCAACCCATGTC+CGG | 0.442191 | 4.1:+6546307 | None:intergenic |
| GCTAGCCGCCCTTATAATAT+GGG | 0.444060 | 4.1:+6547130 | None:intergenic |
| GATGTGGTCTTAAGAGAAAA+TGG | 0.446580 | 4.1:-6548359 | MS.gene79455:CDS |
| GCATACTCCTCCCACCCATT+TGG | 0.447815 | 4.1:+6549222 | None:intergenic |
| CAGTGACACCATTCCTAAAT+GGG | 0.448835 | 4.1:-6549669 | MS.gene79455:intron |
| CCATTTAGGAATGGTGTCAC+TGG | 0.455695 | 4.1:+6549670 | None:intergenic |
| CTCCCAAGCACTCCATCATC+TGG | 0.457469 | 4.1:+6547573 | None:intergenic |
| TTTGTTCATGATGTCATGAA+TGG | 0.459272 | 4.1:+6548021 | None:intergenic |
| GATCAGCTCTCATGGGAGAA+TGG | 0.461970 | 4.1:+6547183 | None:intergenic |
| TAATACCATTCTTTATAGCC+AGG | 0.463008 | 4.1:+6547747 | None:intergenic |
| TCCAAACCGTGTGGTAAAAT+GGG | 0.465398 | 4.1:-6547162 | MS.gene79455:CDS |
| TATGGCTTCACTGTGGATCC+TGG | 0.466550 | 4.1:-6547765 | MS.gene79455:CDS |
| AGCTGTGGCCACATGGGAAC+AGG | 0.467280 | 4.1:-6549477 | MS.gene79455:intron |
| GCTTGGCGTAGGATCAATAA+AGG | 0.468052 | 4.1:-6549201 | MS.gene79455:CDS |
| CGGTTCAATCATTTGGCACT+TGG | 0.469763 | 4.1:+6546281 | None:intergenic |
| TAAAGAATCAATGAATTCCT+TGG | 0.471491 | 4.1:+6549245 | None:intergenic |
| TTACCAGATGATGGAGTGCT+TGG | 0.472129 | 4.1:-6547576 | MS.gene79455:CDS |
| CTCTACCATGCAACGGCGTA+TGG | 0.475443 | 4.1:+6547603 | None:intergenic |
| ACGGTTTGGATCAGCTCTCA+TGG | 0.476271 | 4.1:+6547175 | None:intergenic |
| GTGCAGAGTGCAAATGGACT+TGG | 0.495862 | 4.1:-6549746 | MS.gene79455:intron |
| AGATAGAGCTTCAAGTTCAC+CGG | 0.499166 | 4.1:+6549520 | None:intergenic |
| TCGAGGATCTGCCAAAGCCC+TGG | 0.500630 | 4.1:-6548186 | MS.gene79455:CDS |
| TCAATGAGGATTCTTCGATT+GGG | 0.506002 | 4.1:-6550089 | MS.gene79455:CDS |
| TAACAGAAAGATCCCAAAAC+CGG | 0.511961 | 4.1:-6549539 | MS.gene79455:intron |
| GCACAGCGCCCATACTGTCT+AGG | 0.514239 | 4.1:+6548443 | None:intergenic |
| CTGGAGCATAGTCCCGGACA+TGG | 0.519320 | 4.1:-6546320 | MS.gene79455:CDS |
| CATCATGAACAAAATGATCA+AGG | 0.519724 | 4.1:-6548011 | MS.gene79455:intron |
| TACCAGATGATGGAGTGCTT+GGG | 0.521083 | 4.1:-6547575 | MS.gene79455:CDS |
| GTTCAGCTGCAAAAGGAACT+GGG | 0.526330 | 4.1:-6547836 | MS.gene79455:CDS |
| TATCCTCTGGAGCATAGTCC+CGG | 0.531152 | 4.1:-6546326 | MS.gene79455:CDS |
| TGGATCCTGGCTATAAAGAA+TGG | 0.531996 | 4.1:-6547752 | MS.gene79455:intron |
| AATATTTACCCATTTAGGAA+TGG | 0.532039 | 4.1:+6549661 | None:intergenic |
| CTTGAAAACAAGATTTGGAA+AGG | 0.532426 | 4.1:-6548396 | MS.gene79455:CDS |
| GAGCACAACCATGTATCCTC+TGG | 0.536009 | 4.1:-6546339 | MS.gene79455:CDS |
| ACTATGCTCCAGAGGATACA+TGG | 0.536033 | 4.1:+6546331 | None:intergenic |
| AGGCAGCACTTGATCATATG+AGG | 0.537428 | 4.1:-6546370 | MS.gene79455:CDS |
| TAATTCAACAACTTTATCCA+GGG | 0.541642 | 4.1:+6548169 | None:intergenic |
| TAGAGCTTATTACCAGATGA+TGG | 0.544103 | 4.1:-6547585 | MS.gene79455:CDS |
| GTGCAAAGCAACCCATGTCC+GGG | 0.552522 | 4.1:+6546308 | None:intergenic |
| TTGATTCTTTACCAAATGGG+TGG | 0.556317 | 4.1:-6549233 | MS.gene79455:CDS |
| TGTGATTCAGTGGATATGTA+TGG | 0.556586 | 4.1:-6547783 | MS.gene79455:CDS |
| TGATTCTTTACCAAATGGGT+GGG | 0.557082 | 4.1:-6549232 | MS.gene79455:CDS |
| ACTATACTGAATACGTGGGT+AGG | 0.565449 | 4.1:-6548232 | MS.gene79455:CDS |
| CGAGAACAGGACCTTGTGCA+TGG | 0.566447 | 4.1:-6548507 | MS.gene79455:CDS |
| CACAGCGCCCATACTGTCTA+GGG | 0.566529 | 4.1:+6548444 | None:intergenic |
| CAAGGCCATACGCCGTTGCA+TGG | 0.568742 | 4.1:-6547608 | MS.gene79455:CDS |
| AGAAAATGGTGCTCCAACAC+AGG | 0.573691 | 4.1:-6548345 | MS.gene79455:intron |
| GAATTCCTTGGTGAGTATAG+TGG | 0.574734 | 4.1:+6549257 | None:intergenic |
| TTCTTTACCAAATGGGTGGG+AGG | 0.576101 | 4.1:-6549229 | MS.gene79455:CDS |
| CGGTTTGGATCAGCTCTCAT+GGG | 0.579412 | 4.1:+6547176 | None:intergenic |
| ATGGGTGGGAGGAGTATGCT+TGG | 0.582024 | 4.1:-6549218 | MS.gene79455:CDS |
| CATTTAGGAATGGTGTCACT+GGG | 0.582041 | 4.1:+6549671 | None:intergenic |
| ACTATGGAACATGCACGCAA+TGG | 0.586223 | 4.1:+6546440 | None:intergenic |
| GGGAGGAGTATGCTTGGCGT+AGG | 0.591457 | 4.1:-6549212 | MS.gene79455:CDS |
| CACTGAATCACACATGGAGA+GGG | 0.594319 | 4.1:+6547794 | None:intergenic |
| TGGAGCATAGTCCCGGACAT+GGG | 0.595290 | 4.1:-6546319 | MS.gene79455:CDS |
| CCTCTCCATGTGTGATTCAG+TGG | 0.595614 | 4.1:-6547793 | MS.gene79455:CDS |
| CTAGCCGCCCTTATAATATG+GGG | 0.596833 | 4.1:+6547131 | None:intergenic |
| TGCAGTTTCAAAACTCCGAA+AGG | 0.597777 | 4.1:-6546390 | MS.gene79455:CDS |
| GGAAGTATGGTGGTGTTTCG+GGG | 0.603180 | 4.1:+6548465 | None:intergenic |
| AACCCTGTATATCTCATGCT+AGG | 0.603739 | 4.1:-6547870 | MS.gene79455:CDS |
| GGTCTGAAAGCAGCTGCTAG+TGG | 0.608508 | 4.1:-6549725 | MS.gene79455:CDS |
| CATATCCACTGAATCACACA+TGG | 0.610997 | 4.1:+6547788 | None:intergenic |
| GTCACTGGGAAAACTTATTG+TGG | 0.611690 | 4.1:+6549685 | None:intergenic |
| TATGTGAAGCTGTGGCCACA+TGG | 0.615013 | 4.1:-6549484 | MS.gene79455:CDS |
| TCATCAGTGAGGTGATAACT+GGG | 0.620328 | 4.1:+6549896 | None:intergenic |
| GGAGATAGATGGTTATGATG+TGG | 0.625992 | 4.1:-6548375 | MS.gene79455:CDS |
| ACATTTCGTCTTCTAAATCG+AGG | 0.628109 | 4.1:-6548203 | MS.gene79455:CDS |
| GTTGATCAACTAACCTGTGT+TGG | 0.631542 | 4.1:+6548332 | None:intergenic |
| CAACTCTTTCCAGAAATGTG+TGG | 0.637426 | 4.1:-6549846 | MS.gene79455:intron |
| CATACTTCCCTAGACAGTAT+GGG | 0.637488 | 4.1:-6548451 | MS.gene79455:CDS |
| GCAGAACTATACTGAATACG+TGG | 0.637788 | 4.1:-6548237 | MS.gene79455:intron |
| CACCTAGCATGAGATATACA+GGG | 0.642472 | 4.1:+6547868 | None:intergenic |
| ACAAGGTCCTGTTCTCGCAG+CGG | 0.645836 | 4.1:+6548513 | None:intergenic |
| TAATAAGCTCTACCATGCAA+CGG | 0.648031 | 4.1:+6547596 | None:intergenic |
| CCACTGAATCACACATGGAG+AGG | 0.654918 | 4.1:+6547793 | None:intergenic |
| TGAAAGTTTCTCCATGCACA+AGG | 0.655622 | 4.1:+6548496 | None:intergenic |
| TGTCCGGGACTATGCTCCAG+AGG | 0.668323 | 4.1:+6546323 | None:intergenic |
| TACTGTCTAGGGAAGTATGG+TGG | 0.686540 | 4.1:+6548455 | None:intergenic |
| ATGTGAAGCTGTGGCCACAT+GGG | 0.687320 | 4.1:-6549483 | MS.gene79455:CDS |
| TAGCCGCCCTTATAATATGG+GGG | 0.690590 | 4.1:+6547132 | None:intergenic |
| ATTCAGCTTCTTCATCAGTG+AGG | 0.694845 | 4.1:+6549885 | None:intergenic |
| CAGCACCACTATACTCACCA+AGG | 0.696597 | 4.1:-6549262 | MS.gene79455:CDS |
| TATTTCTCTGAATCTCGACA+AGG | 0.700218 | 4.1:-6547626 | MS.gene79455:CDS |
| AAAGCTTACCTGTTCCCATG+TGG | 0.710847 | 4.1:+6549469 | None:intergenic |
| CAGAACTATACTGAATACGT+GGG | 0.713525 | 4.1:-6548236 | MS.gene79455:CDS |
| GAGAGCTGATCCAAACCGTG+TGG | 0.731846 | 4.1:-6547171 | MS.gene79455:CDS |
| TTGCATCAGAGAAATTACTG+AGG | 0.771834 | 4.1:-6547106 | MS.gene79455:intron |
| GGATATGTATGGCTTCACTG+TGG | 0.776130 | 4.1:-6547772 | MS.gene79455:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAATGCAATTGAATT+TGG | + | chr4.1:6547284-6547303 | None:intergenic | 15.0% |
| !! | AATTATAGTATCAAATTTCT+TGG | - | chr4.1:6549495-6549514 | MS.gene79455:CDS | 15.0% |
| !! | TAACTATAAGTAGTTATAAA+AGG | + | chr4.1:6547768-6547787 | None:intergenic | 15.0% |
| !!! | AAAAAAAAATCTTTAGAACA+CGG | + | chr4.1:6549342-6549361 | None:intergenic | 15.0% |
| !! | AAAAACAATGTGATAGAATA+TGG | + | chr4.1:6546425-6546444 | None:intergenic | 20.0% |
| !! | AAAATTTCAGTTGTCTTAAT+AGG | + | chr4.1:6549529-6549548 | None:intergenic | 20.0% |
| !! | AACATATATTTAAACCACAA+AGG | + | chr4.1:6546963-6546982 | None:intergenic | 20.0% |
| !! | AACTACTTATAGTTAAATTC+AGG | - | chr4.1:6547773-6547792 | MS.gene79455:CDS | 20.0% |
| !! | GAATAAATGTATAATTGTCA+TGG | - | chr4.1:6549405-6549424 | MS.gene79455:intron | 20.0% |
| !! | TAAAAATTAAAGATAGCAAG+TGG | - | chr4.1:6549733-6549752 | MS.gene79455:CDS | 20.0% |
| !! | TAGTTATAAAAGGATAAACA+TGG | + | chr4.1:6547758-6547777 | None:intergenic | 20.0% |
| !! | TGTCCTGAAATTAATTTATA+AGG | + | chr4.1:6548726-6548745 | None:intergenic | 20.0% |
| !!! | GTGTTTATTTTGTATTGAAT+TGG | - | chr4.1:6549081-6549100 | MS.gene79455:intron | 20.0% |
| !!! | TCTCAATTTATGTTTTTTAC+AGG | - | chr4.1:6549888-6549907 | MS.gene79455:CDS | 20.0% |
| ! | AATATTTACCCATTTAGGAA+TGG | + | chr4.1:6546717-6546736 | None:intergenic | 25.0% |
| ! | ATAATTATACTCAAACTGCT+AGG | + | chr4.1:6549109-6549128 | None:intergenic | 25.0% |
| ! | GAAAGAAAATTACACAAACA+TGG | + | chr4.1:6548068-6548087 | None:intergenic | 25.0% |
| ! | GATAAAGTTGTTGAATTAGA+TGG | - | chr4.1:6548211-6548230 | MS.gene79455:CDS | 25.0% |
| ! | TAAAGAATCAATGAATTCCT+TGG | + | chr4.1:6547133-6547152 | None:intergenic | 25.0% |
| ! | TAATTCAACAACTTTATCCA+GGG | + | chr4.1:6548209-6548228 | None:intergenic | 25.0% |
| ! | TACTTATTAGTTATTACTGC+TGG | - | chr4.1:6548836-6548855 | MS.gene79455:intron | 25.0% |
| ! | TGATACTAATGACTTTCATT+TGG | - | chr4.1:6548932-6548951 | MS.gene79455:intron | 25.0% |
| ! | TGTTATAAAGTCTCACAAAT+AGG | - | chr4.1:6547819-6547838 | MS.gene79455:CDS | 25.0% |
| ! | TTAGGAATATTTACCCATTT+AGG | + | chr4.1:6546722-6546741 | None:intergenic | 25.0% |
| ! | TTGTATAAATCATAAGCAAG+TGG | - | chr4.1:6549059-6549078 | MS.gene79455:intron | 25.0% |
| !! | AATGGTATTAAATGATTTGC+TGG | - | chr4.1:6548641-6548660 | MS.gene79455:intron | 25.0% |
| !! | AGGCCTTATAAATTAATTTC+AGG | - | chr4.1:6548720-6548739 | MS.gene79455:intron | 25.0% |
| !! | ATAAAGATTTTCCTTGATGT+TGG | - | chr4.1:6548967-6548986 | MS.gene79455:intron | 25.0% |
| !! | ATTATTGAAGTGTTCAACTA+AGG | - | chr4.1:6549036-6549055 | MS.gene79455:intron | 25.0% |
| !! | TGACTAAGTATAACTACTTT+TGG | + | chr4.1:6546755-6546774 | None:intergenic | 25.0% |
| !! | TTTAACTAATTTTACACCAC+AGG | + | chr4.1:6546778-6546797 | None:intergenic | 25.0% |
| !!! | AGTGTTCTATAGATTTTAAC+AGG | - | chr4.1:6549372-6549391 | MS.gene79455:intron | 25.0% |
| !!! | ATGGTATTAAATGATTTGCT+GGG | - | chr4.1:6548642-6548661 | MS.gene79455:intron | 25.0% |
| !!! | CTGTGTTTTATTTCAACATT+TGG | - | chr4.1:6547560-6547579 | MS.gene79455:intron | 25.0% |
| !!! | GTGTTCTATAGATTTTAACA+GGG | - | chr4.1:6549373-6549392 | MS.gene79455:intron | 25.0% |
| !!! | TCATTGATTCTTTACCAAAT+GGG | - | chr4.1:6547139-6547158 | MS.gene79455:CDS | 25.0% |
| !!! | TTCAAGTTTTTAAACATTGC+AGG | + | chr4.1:6549614-6549633 | None:intergenic | 25.0% |
| !!! | TTCATTGATTCTTTACCAAA+TGG | - | chr4.1:6547138-6547157 | MS.gene79455:CDS | 25.0% |
| AAATGGGTATATAGAATGTG+TGG | + | chr4.1:6548441-6548460 | None:intergenic | 30.0% | |
| AATGTGATTACTTGATCAGT+AGG | - | chr4.1:6548700-6548719 | MS.gene79455:intron | 30.0% | |
| AGATATACAGGGTTTCTTAT+AGG | + | chr4.1:6548499-6548518 | None:intergenic | 30.0% | |
| AGCAATTAAAGGATCTTTGA+AGG | + | chr4.1:6548415-6548434 | None:intergenic | 30.0% | |
| AGGGGAAATAAAGAACAAAA+TGG | + | chr4.1:6549314-6549333 | None:intergenic | 30.0% | |
| ATAATTATCAGCCAACATCA+AGG | + | chr4.1:6548981-6549000 | None:intergenic | 30.0% | |
| ATACATACATACAGAAGGTT+CGG | + | chr4.1:6546371-6546390 | None:intergenic | 30.0% | |
| ATACCCATTTGCAAAGAAAT+CGG | - | chr4.1:6548451-6548470 | MS.gene79455:CDS | 30.0% | |
| CAGAAACAGCATTTATAGTA+AGG | + | chr4.1:6548298-6548317 | None:intergenic | 30.0% | |
| CAGTTAAATTTAGCATCATG+AGG | - | chr4.1:6548876-6548895 | MS.gene79455:intron | 30.0% | |
| CATACATACATACATACAGA+AGG | + | chr4.1:6546376-6546395 | None:intergenic | 30.0% | |
| CATCATGAACAAAATGATCA+AGG | - | chr4.1:6548364-6548383 | MS.gene79455:CDS | 30.0% | |
| CTAATTCAACAACTTTATCC+AGG | + | chr4.1:6548210-6548229 | None:intergenic | 30.0% | |
| CTTGAAAACAAGATTTGGAA+AGG | - | chr4.1:6547979-6547998 | MS.gene79455:intron | 30.0% | |
| GATCTCTTGAAAACAAGATT+TGG | - | chr4.1:6547974-6547993 | MS.gene79455:intron | 30.0% | |
| GGAAATAAAGAACAAAATGG+GGG | + | chr4.1:6549311-6549330 | None:intergenic | 30.0% | |
| GGGAAATAAAGAACAAAATG+GGG | + | chr4.1:6549312-6549331 | None:intergenic | 30.0% | |
| GGGGAAATAAAGAACAAAAT+GGG | + | chr4.1:6549313-6549332 | None:intergenic | 30.0% | |
| TAAATCATGTTCATGAGTGA+AGG | - | chr4.1:6549574-6549593 | MS.gene79455:intron | 30.0% | |
| TAATACCATTCTTTATAGCC+AGG | + | chr4.1:6548631-6548650 | None:intergenic | 30.0% | |
| TATGTTACGTTTAGCAATCA+AGG | + | chr4.1:6547697-6547716 | None:intergenic | 30.0% | |
| TTATTAGTTATTACTGCTGG+TGG | - | chr4.1:6548839-6548858 | MS.gene79455:intron | 30.0% | |
| TTTGTTCATGATGTCATGAA+TGG | + | chr4.1:6548357-6548376 | None:intergenic | 30.0% | |
| ! | AAAGGAGAGTATAAACCTAT+GGG | + | chr4.1:6546945-6546964 | None:intergenic | 30.0% |
| ! | AATTAAAGGATCTTTGAAGG+TGG | + | chr4.1:6548412-6548431 | None:intergenic | 30.0% |
| ! | TTTTAATCTATGTGAAGCTG+TGG | - | chr4.1:6546883-6546902 | MS.gene79455:intron | 30.0% |
| !! | TTAAATGATTTGCTGGGAAT+TGG | - | chr4.1:6548648-6548667 | MS.gene79455:intron | 30.0% |
| !! | TTTAGCTTGCTTCTTAACTA+TGG | + | chr4.1:6549954-6549973 | None:intergenic | 30.0% |
| !!! | ATGAGGATGATTTTAAGTTC+CGG | - | chr4.1:6548893-6548912 | MS.gene79455:intron | 30.0% |
| !!! | TATGTTTTTTACAGGAGAGT+TGG | - | chr4.1:6549896-6549915 | MS.gene79455:CDS | 30.0% |
| AAAAGGATAAACATGGAACG+TGG | + | chr4.1:6547751-6547770 | None:intergenic | 35.0% | |
| AACACAGCTAATTCTAGTGA+TGG | + | chr4.1:6547547-6547566 | None:intergenic | 35.0% | |
| AAGGCTCGAGTAATTCATAA+TGG | + | chr4.1:6548279-6548298 | None:intergenic | 35.0% | |
| AAGGTATGTTTCCTCATCAA+TGG | - | chr4.1:6548383-6548402 | MS.gene79455:CDS | 35.0% | |
| AATGAAGAAGGTAGATGAGA+AGG | + | chr4.1:6549155-6549174 | None:intergenic | 35.0% | |
| ACATTTCGTCTTCTAAATCG+AGG | - | chr4.1:6548172-6548191 | MS.gene79455:CDS | 35.0% | |
| AGACGTGAATAGAACTTAGT+GGG | + | chr4.1:6548118-6548137 | None:intergenic | 35.0% | |
| AGATTTGGAAAGGAGATAGA+TGG | - | chr4.1:6547989-6548008 | MS.gene79455:intron | 35.0% | |
| ATTTGACTGAGTAGCTGATT+TGG | - | chr4.1:6546600-6546619 | MS.gene79455:intron | 35.0% | |
| ATTTGTGATCAGACAATTGC+AGG | + | chr4.1:6549797-6549816 | None:intergenic | 35.0% | |
| CAGAACTATACTGAATACGT+GGG | - | chr4.1:6548139-6548158 | MS.gene79455:intron | 35.0% | |
| CAGTTAGAGAGATAATCTGA+AGG | + | chr4.1:6549713-6549732 | None:intergenic | 35.0% | |
| CATAATGGCATTGTAACAAG+TGG | + | chr4.1:6548264-6548283 | None:intergenic | 35.0% | |
| CCAAATGAAGCCATACAAAA+GGG | + | chr4.1:6549651-6549670 | None:intergenic | 35.0% | |
| GATCAGCTTAACAATGAAGA+AGG | + | chr4.1:6549167-6549186 | None:intergenic | 35.0% | |
| GCCATTTGTATTTACATCAC+CGG | - | chr4.1:6546340-6546359 | MS.gene79455:CDS | 35.0% | |
| GGAAAAGATGGCATAAGAAA+AGG | + | chr4.1:6547668-6547687 | None:intergenic | 35.0% | |
| GTTAGATGAAAGCTCATGAA+TGG | - | chr4.1:6549452-6549471 | MS.gene79455:intron | 35.0% | |
| TAACAGAAAGATCCCAAAAC+CGG | - | chr4.1:6546836-6546855 | MS.gene79455:intron | 35.0% | |
| TAATAAGCTCTACCATGCAA+CGG | + | chr4.1:6548782-6548801 | None:intergenic | 35.0% | |
| TAGAGCTTATTACCAGATGA+TGG | - | chr4.1:6548790-6548809 | MS.gene79455:intron | 35.0% | |
| TAGGTTTATACTCTCCTTTG+TGG | - | chr4.1:6546946-6546965 | MS.gene79455:intron | 35.0% | |
| TAGTTATACTTAGTCACCTG+TGG | - | chr4.1:6546759-6546778 | MS.gene79455:intron | 35.0% | |
| TATTTCTCTGAATCTCGACA+AGG | - | chr4.1:6548749-6548768 | MS.gene79455:intron | 35.0% | |
| TCCGGTGATGTAAATACAAA+TGG | + | chr4.1:6546344-6546363 | None:intergenic | 35.0% | |
| TGATTCTTTACCAAATGGGT+GGG | - | chr4.1:6547143-6547162 | MS.gene79455:CDS | 35.0% | |
| TGTGATTCAGTGGATATGTA+TGG | - | chr4.1:6548592-6548611 | MS.gene79455:intron | 35.0% | |
| TGTGGTATATCATGTGAACT+AGG | - | chr4.1:6547464-6547483 | MS.gene79455:intron | 35.0% | |
| TTATGTCGCACAGTATTACA+AGG | - | chr4.1:6547595-6547614 | MS.gene79455:CDS | 35.0% | |
| TTGATTCTTTACCAAATGGG+TGG | - | chr4.1:6547142-6547161 | MS.gene79455:CDS | 35.0% | |
| TTGCATCAGAGAAATTACTG+AGG | - | chr4.1:6549269-6549288 | MS.gene79455:CDS | 35.0% | |
| TTGTGATTGTCAATACCCAT+AGG | - | chr4.1:6546927-6546946 | MS.gene79455:intron | 35.0% | |
| TTGTTGTGATTCTTGACTGA+TGG | - | chr4.1:6546801-6546820 | MS.gene79455:intron | 35.0% | |
| ! | AAAGCCGATTTCTTTGCAAA+TGG | + | chr4.1:6548458-6548477 | None:intergenic | 35.0% |
| ! | AAGCCGATTTCTTTGCAAAT+GGG | + | chr4.1:6548457-6548476 | None:intergenic | 35.0% |
| ! | ACTTTTGGCAGTGAATGATT+AGG | + | chr4.1:6546740-6546759 | None:intergenic | 35.0% |
| ! | CAAAGGAGAGTATAAACCTA+TGG | + | chr4.1:6546946-6546965 | None:intergenic | 35.0% |
| ! | CTGTGCTGTTATTGGTAATT+CGG | - | chr4.1:6547949-6547968 | MS.gene79455:intron | 35.0% |
| ! | GATGTGGTCTTAAGAGAAAA+TGG | - | chr4.1:6548016-6548035 | MS.gene79455:CDS | 35.0% |
| ! | TGTGCTGTTATTGGTAATTC+GGG | - | chr4.1:6547950-6547969 | MS.gene79455:intron | 35.0% |
| !! | ATCTTTAGAACACGGTTTGA+AGG | + | chr4.1:6549334-6549353 | None:intergenic | 35.0% |
| !! | TCTTTAGAACACGGTTTGAA+GGG | + | chr4.1:6549333-6549352 | None:intergenic | 35.0% |
| AAAGAACAAAATGGGGGATG+CGG | + | chr4.1:6549305-6549324 | None:intergenic | 40.0% | |
| AACAACTTTATCCAGGGCTT+TGG | + | chr4.1:6548203-6548222 | None:intergenic | 40.0% | |
| AACCCTGTATATCTCATGCT+AGG | - | chr4.1:6548505-6548524 | MS.gene79455:CDS | 40.0% | |
| ACTATACTGAATACGTGGGT+AGG | - | chr4.1:6548143-6548162 | MS.gene79455:intron | 40.0% | |
| AGGCACGTATAACAGTAAAC+TGG | + | chr4.1:6549693-6549712 | None:intergenic | 40.0% | |
| ATCCAAACCGTGTGGTAAAA+TGG | - | chr4.1:6549212-6549231 | MS.gene79455:CDS | 40.0% | |
| ATGTGTGGCACAGCAATTAA+AGG | + | chr4.1:6548426-6548445 | None:intergenic | 40.0% | |
| ATTCAGCTTCTTCATCAGTG+AGG | + | chr4.1:6546493-6546512 | None:intergenic | 40.0% | |
| CAACTCTTTCCAGAAATGTG+TGG | - | chr4.1:6546529-6546548 | MS.gene79455:intron | 40.0% | |
| CACCTAGCATGAGATATACA+GGG | + | chr4.1:6548510-6548529 | None:intergenic | 40.0% | |
| CAGACGTGAATAGAACTTAG+TGG | + | chr4.1:6548119-6548138 | None:intergenic | 40.0% | |
| CAGTGACACCATTCCTAAAT+GGG | - | chr4.1:6546706-6546725 | MS.gene79455:intron | 40.0% | |
| CATACTTCCCTAGACAGTAT+GGG | - | chr4.1:6547924-6547943 | MS.gene79455:intron | 40.0% | |
| CATATCCACTGAATCACACA+TGG | + | chr4.1:6548590-6548609 | None:intergenic | 40.0% | |
| CGTATAACAGTAAACTGGCA+TGG | + | chr4.1:6549688-6549707 | None:intergenic | 40.0% | |
| CTTTCCAGAAATGTGTGGTA+AGG | - | chr4.1:6546534-6546553 | MS.gene79455:intron | 40.0% | |
| GAAACCTTACCACACATTTC+TGG | + | chr4.1:6546541-6546560 | None:intergenic | 40.0% | |
| GAATTCCTTGGTGAGTATAG+TGG | + | chr4.1:6547121-6547140 | None:intergenic | 40.0% | |
| GATGATTATAACTGCCACAG+AGG | - | chr4.1:6547359-6547378 | MS.gene79455:intron | 40.0% | |
| GCAAACAAATGCTAGACTGT+AGG | + | chr4.1:6547626-6547645 | None:intergenic | 40.0% | |
| GCAGAACTATACTGAATACG+TGG | - | chr4.1:6548138-6548157 | MS.gene79455:intron | 40.0% | |
| GCCAAATGAAGCCATACAAA+AGG | + | chr4.1:6549652-6549671 | None:intergenic | 40.0% | |
| GGAGATAGATGGTTATGATG+TGG | - | chr4.1:6548000-6548019 | MS.gene79455:intron | 40.0% | |
| GTCACTGGGAAAACTTATTG+TGG | + | chr4.1:6546693-6546712 | None:intergenic | 40.0% | |
| GTTGATCAACTAACCTGTGT+TGG | + | chr4.1:6548046-6548065 | None:intergenic | 40.0% | |
| TCATCAGTGAGGTGATAACT+GGG | + | chr4.1:6546482-6546501 | None:intergenic | 40.0% | |
| TCCAAACCGTGTGGTAAAAT+GGG | - | chr4.1:6549213-6549232 | MS.gene79455:CDS | 40.0% | |
| TCCAAGCCCCCATATTATAA+GGG | - | chr4.1:6549237-6549256 | MS.gene79455:CDS | 40.0% | |
| TGAAAGTTTCTCCATGCACA+AGG | + | chr4.1:6547882-6547901 | None:intergenic | 40.0% | |
| TGAAATTCGCATAACCTCTG+TGG | + | chr4.1:6547376-6547395 | None:intergenic | 40.0% | |
| TGCAGTTTCAAAACTCCGAA+AGG | - | chr4.1:6549985-6550004 | MS.gene79455:intron | 40.0% | |
| TGGATCCTGGCTATAAAGAA+TGG | - | chr4.1:6548623-6548642 | MS.gene79455:intron | 40.0% | |
| TTCATCAGTGAGGTGATAAC+TGG | + | chr4.1:6546483-6546502 | None:intergenic | 40.0% | |
| TTCCAAGCCCCCATATTATA+AGG | - | chr4.1:6549236-6549255 | MS.gene79455:CDS | 40.0% | |
| TTGCTGGGAATTGGTATTTC+TGG | - | chr4.1:6548657-6548676 | MS.gene79455:intron | 40.0% | |
| TTGTGATTCTTGACTGATGG+AGG | - | chr4.1:6546804-6546823 | MS.gene79455:intron | 40.0% | |
| ! | AGATAGAGCTTCAAGTTCAC+CGG | + | chr4.1:6546858-6546877 | None:intergenic | 40.0% |
| ! | CCCTTTTGTATGGCTTCATT+TGG | - | chr4.1:6549648-6549667 | MS.gene79455:intron | 40.0% |
| ! | TATGATCAAGTGCTGCCTTT+CGG | + | chr4.1:6550003-6550022 | None:intergenic | 40.0% |
| ! | TGAATAGAACTTAGTGGGCA+AGG | + | chr4.1:6548113-6548132 | None:intergenic | 40.0% |
| ! | TGTTTTGTGCAGAGTGCAAA+TGG | - | chr4.1:6546623-6546642 | MS.gene79455:intron | 40.0% |
| ! | TTGGAACCCATTTTACCACA+CGG | + | chr4.1:6549222-6549241 | None:intergenic | 40.0% |
| ! | TTGTTGCTTGCTTTAGCATC+TGG | - | chr4.1:6546310-6546329 | MS.gene79455:CDS | 40.0% |
| !! | CATTTAGGAATGGTGTCACT+GGG | + | chr4.1:6546707-6546726 | None:intergenic | 40.0% |
| !! | CTTTAGAACACGGTTTGAAG+GGG | + | chr4.1:6549332-6549351 | None:intergenic | 40.0% |
| !! | TGACTTTCATTTGGTGCGTA+AGG | - | chr4.1:6548941-6548960 | MS.gene79455:intron | 40.0% |
| !!! | AGGATGATTTTAAGTTCCGG+AGG | - | chr4.1:6548896-6548915 | MS.gene79455:intron | 40.0% |
| !!! | GGATGATTTTAAGTTCCGGA+GGG | - | chr4.1:6548897-6548916 | MS.gene79455:intron | 40.0% |
| AAAGCTTACCTGTTCCCATG+TGG | + | chr4.1:6546909-6546928 | None:intergenic | 45.0% | |
| AAGAACAAAATGGGGGATGC+GGG | + | chr4.1:6549304-6549323 | None:intergenic | 45.0% | |
| AAGCCCCCATATTATAAGGG+CGG | - | chr4.1:6549240-6549259 | MS.gene79455:CDS | 45.0% | |
| ACACGGCAATAAGCTGGTAA+GGG | + | chr4.1:6547070-6547089 | None:intergenic | 45.0% | |
| ACCTCAAATGATCTGCAGCT+AGG | - | chr4.1:6547398-6547417 | MS.gene79455:intron | 45.0% | |
| ACCTGAGCAGTCATTACACA+CGG | + | chr4.1:6547087-6547106 | None:intergenic | 45.0% | |
| ACTATGCTCCAGAGGATACA+TGG | + | chr4.1:6550047-6550066 | None:intergenic | 45.0% | |
| ACTATGGAACATGCACGCAA+TGG | + | chr4.1:6549938-6549957 | None:intergenic | 45.0% | |
| AGAAAATGGTGCTCCAACAC+AGG | - | chr4.1:6548030-6548049 | MS.gene79455:CDS | 45.0% | |
| AGGCAGCACTTGATCATATG+AGG | - | chr4.1:6550005-6550024 | MS.gene79455:intron | 45.0% | |
| ATATACCACACGCCTTCTTC+AGG | + | chr4.1:6547454-6547473 | None:intergenic | 45.0% | |
| CACTGAATCACACATGGAGA+GGG | + | chr4.1:6548584-6548603 | None:intergenic | 45.0% | |
| CAGCTAGGCAGAGTATATGT+TGG | - | chr4.1:6547413-6547432 | MS.gene79455:intron | 45.0% | |
| CATTACACACGGCAATAAGC+TGG | + | chr4.1:6547076-6547095 | None:intergenic | 45.0% | |
| CCAGTGACACCATTCCTAAA+TGG | - | chr4.1:6546705-6546724 | MS.gene79455:intron | 45.0% | |
| CCATACTGTCTAGGGAAGTA+TGG | + | chr4.1:6547926-6547945 | None:intergenic | 45.0% | |
| CCATACTTCCCTAGACAGTA+TGG | - | chr4.1:6547923-6547942 | MS.gene79455:intron | 45.0% | |
| CTAGCCGCCCTTATAATATG+GGG | + | chr4.1:6549247-6549266 | None:intergenic | 45.0% | |
| GACAATTGCAGGATAGCATG+AGG | + | chr4.1:6549786-6549805 | None:intergenic | 45.0% | |
| GCACCTAGCATGAGATATAC+AGG | + | chr4.1:6548511-6548530 | None:intergenic | 45.0% | |
| GCTAGCCGCCCTTATAATAT+GGG | + | chr4.1:6549248-6549267 | None:intergenic | 45.0% | |
| GCTTGGCGTAGGATCAATAA+AGG | - | chr4.1:6547174-6547193 | MS.gene79455:CDS | 45.0% | |
| GGATATGTATGGCTTCACTG+TGG | - | chr4.1:6548603-6548622 | MS.gene79455:intron | 45.0% | |
| GTTCAGCTGCAAAAGGAACT+GGG | - | chr4.1:6548539-6548558 | MS.gene79455:intron | 45.0% | |
| GTTTAGCAATCAAGGCAGAG+TGG | + | chr4.1:6547689-6547708 | None:intergenic | 45.0% | |
| TAGCCGCCCTTATAATATGG+GGG | + | chr4.1:6549246-6549265 | None:intergenic | 45.0% | |
| TCAAGGCAGAGTGGAAAAGA+TGG | + | chr4.1:6547680-6547699 | None:intergenic | 45.0% | |
| TGAGCTCTTCATCCTGAAGA+AGG | - | chr4.1:6547439-6547458 | MS.gene79455:intron | 45.0% | |
| TGCAAAAGGAACTGGGCTTA+AGG | - | chr4.1:6548546-6548565 | MS.gene79455:intron | 45.0% | |
| TGCTAGCCGCCCTTATAATA+TGG | + | chr4.1:6549249-6549268 | None:intergenic | 45.0% | |
| TGTTCATGAGTGAAGGCTGT+TGG | - | chr4.1:6549581-6549600 | MS.gene79455:intron | 45.0% | |
| TTCTTTACCAAATGGGTGGG+AGG | - | chr4.1:6547146-6547165 | MS.gene79455:CDS | 45.0% | |
| ! | AACTTAGTGGGCAAGGTCTT+AGG | + | chr4.1:6548106-6548125 | None:intergenic | 45.0% |
| ! | ACCCATTTTACCACACGGTT+TGG | + | chr4.1:6549217-6549236 | None:intergenic | 45.0% |
| ! | AGGGAAGTATGGTGGTGTTT+CGG | + | chr4.1:6547915-6547934 | None:intergenic | 45.0% |
| ! | CTGATCACAGCCCTTTTGTA+TGG | - | chr4.1:6549638-6549657 | MS.gene79455:intron | 45.0% |
| ! | GAAGGTGGATTCCATTGATG+AGG | + | chr4.1:6548397-6548416 | None:intergenic | 45.0% |
| ! | TACTGTCTAGGGAAGTATGG+TGG | + | chr4.1:6547923-6547942 | None:intergenic | 45.0% |
| ! | TCACTTTAACTTACGCCCTC+CGG | + | chr4.1:6548915-6548934 | None:intergenic | 45.0% |
| ! | TCCTTTGGTTCAGCTGCAAA+AGG | - | chr4.1:6548532-6548551 | MS.gene79455:intron | 45.0% |
| ! | TCCTTTTGCAGCTGAACCAA+AGG | + | chr4.1:6548536-6548555 | None:intergenic | 45.0% |
| ! | TGGGCAAGGTCTTAGGTTTT+GGG | + | chr4.1:6548099-6548118 | None:intergenic | 45.0% |
| ! | TTCATTTGGCCCCAGACTTT+TGG | - | chr4.1:6549662-6549681 | MS.gene79455:intron | 45.0% |
| ! | TTTTACAGGAGAGTTGGAGC+AGG | - | chr4.1:6549902-6549921 | MS.gene79455:intron | 45.0% |
| !! | AATCGGCTTTTGTCTTCTGC+AGG | - | chr4.1:6548468-6548487 | MS.gene79455:CDS | 45.0% |
| !! | CCATTTAGGAATGGTGTCAC+TGG | + | chr4.1:6546708-6546727 | None:intergenic | 45.0% |
| !! | TACCAGATGATGGAGTGCTT+GGG | - | chr4.1:6548800-6548819 | MS.gene79455:intron | 45.0% |
| !! | TTACCAGATGATGGAGTGCT+TGG | - | chr4.1:6548799-6548818 | MS.gene79455:intron | 45.0% |
| !!! | AGCTTCAAGTTCACCGGTTT+TGG | + | chr4.1:6546852-6546871 | None:intergenic | 45.0% |
| !!! | GCTTCAAGTTCACCGGTTTT+GGG | + | chr4.1:6546851-6546870 | None:intergenic | 45.0% |
| AACTGGCATGGCCAAAAGTC+TGG | + | chr4.1:6549676-6549695 | None:intergenic | 50.0% | |
| ACTGGCATGGCCAAAAGTCT+GGG | + | chr4.1:6549675-6549694 | None:intergenic | 50.0% | |
| AGGATAGCATGAGGCATGCA+AGG | + | chr4.1:6549777-6549796 | None:intergenic | 50.0% | |
| AGTGCAAAGCAACCCATGTC+CGG | + | chr4.1:6550071-6550090 | None:intergenic | 50.0% | |
| ATGTGAAGCTGTGGCCACAT+GGG | - | chr4.1:6546892-6546911 | MS.gene79455:intron | 50.0% | |
| CACACGGCAATAAGCTGGTA+AGG | + | chr4.1:6547071-6547090 | None:intergenic | 50.0% | |
| CAGCACCACTATACTCACCA+AGG | - | chr4.1:6547113-6547132 | MS.gene79455:CDS | 50.0% | |
| CCACTGAATCACACATGGAG+AGG | + | chr4.1:6548585-6548604 | None:intergenic | 50.0% | |
| CCTCTCCATGTGTGATTCAG+TGG | - | chr4.1:6548582-6548601 | MS.gene79455:intron | 50.0% | |
| CTCATGCTAGGTGCTTCCTT+TGG | - | chr4.1:6548517-6548536 | MS.gene79455:CDS | 50.0% | |
| GAGCACAACCATGTATCCTC+TGG | - | chr4.1:6550036-6550055 | MS.gene79455:intron | 50.0% | |
| GATCAGCTCTCATGGGAGAA+TGG | + | chr4.1:6549195-6549214 | None:intergenic | 50.0% | |
| GCCCTTATAATATGGGGGCT+TGG | + | chr4.1:6549241-6549260 | None:intergenic | 50.0% | |
| GCCTAGCTGCAGATCATTTG+AGG | + | chr4.1:6547402-6547421 | None:intergenic | 50.0% | |
| GGTTCAGCTGCAAAAGGAAC+TGG | - | chr4.1:6548538-6548557 | MS.gene79455:intron | 50.0% | |
| GTGTAATGACTGCTCAGGTG+CGG | - | chr4.1:6547088-6547107 | MS.gene79455:intron | 50.0% | |
| TACAGAAGGTTCGGAGAGTC+CGG | + | chr4.1:6546362-6546381 | None:intergenic | 50.0% | |
| TATGGCTTCACTGTGGATCC+TGG | - | chr4.1:6548610-6548629 | MS.gene79455:intron | 50.0% | |
| TATGTGAAGCTGTGGCCACA+TGG | - | chr4.1:6546891-6546910 | MS.gene79455:intron | 50.0% | |
| ! | ACGGTTTGGATCAGCTCTCA+TGG | + | chr4.1:6549203-6549222 | None:intergenic | 50.0% |
| ! | CGGTTTGGATCAGCTCTCAT+GGG | + | chr4.1:6549202-6549221 | None:intergenic | 50.0% |
| ! | GGAAGTATGGTGGTGTTTCG+GGG | + | chr4.1:6547913-6547932 | None:intergenic | 50.0% |
| ! | GGGAAGTATGGTGGTGTTTC+GGG | + | chr4.1:6547914-6547933 | None:intergenic | 50.0% |
| ! | GTGCAGAGTGCAAATGGACT+TGG | - | chr4.1:6546629-6546648 | MS.gene79455:intron | 50.0% |
| ! | GTGGGCAAGGTCTTAGGTTT+TGG | + | chr4.1:6548100-6548119 | None:intergenic | 50.0% |
| ! | TATGGGCGCTGTGCTGTTAT+TGG | - | chr4.1:6547941-6547960 | MS.gene79455:intron | 50.0% |
| ! | TTCATCCTGAAGAAGGCGTG+TGG | - | chr4.1:6547446-6547465 | MS.gene79455:intron | 50.0% |
| !! | TATCCTCTGGAGCATAGTCC+CGG | - | chr4.1:6550049-6550068 | MS.gene79455:intron | 50.0% |
| ACAAGGTCCTGTTCTCGCAG+CGG | + | chr4.1:6547865-6547884 | None:intergenic | 55.0% | |
| CACAGCGCCCATACTGTCTA+GGG | + | chr4.1:6547934-6547953 | None:intergenic | 55.0% | |
| CGAGAACAGGACCTTGTGCA+TGG | - | chr4.1:6547868-6547887 | MS.gene79455:CDS | 55.0% | |
| CTCCCAAGCACTCCATCATC+TGG | + | chr4.1:6548805-6548824 | None:intergenic | 55.0% | |
| CTCTACCATGCAACGGCGTA+TGG | + | chr4.1:6548775-6548794 | None:intergenic | 55.0% | |
| CTGGCATGGCCAAAAGTCTG+GGG | + | chr4.1:6549674-6549693 | None:intergenic | 55.0% | |
| GAGAGCTGATCCAAACCGTG+TGG | - | chr4.1:6549204-6549223 | MS.gene79455:CDS | 55.0% | |
| GCATACTCCTCCCACCCATT+TGG | + | chr4.1:6547156-6547175 | None:intergenic | 55.0% | |
| GCCGTGTGTAATGACTGCTC+AGG | - | chr4.1:6547083-6547102 | MS.gene79455:intron | 55.0% | |
| GGTCTGAAAGCAGCTGCTAG+TGG | - | chr4.1:6546650-6546669 | MS.gene79455:intron | 55.0% | |
| GTGCAAAGCAACCCATGTCC+GGG | + | chr4.1:6550070-6550089 | None:intergenic | 55.0% | |
| TGGAGCATAGTCCCGGACAT+GGG | - | chr4.1:6550056-6550075 | MS.gene79455:CDS | 55.0% | |
| ! | ATGGGTGGGAGGAGTATGCT+TGG | - | chr4.1:6547157-6547176 | MS.gene79455:CDS | 55.0% |
| AGCTGTGGCCACATGGGAAC+AGG | - | chr4.1:6546898-6546917 | MS.gene79455:intron | 60.0% | |
| CAAGGCCATACGCCGTTGCA+TGG | - | chr4.1:6548767-6548786 | MS.gene79455:intron | 60.0% | |
| CTGGAGCATAGTCCCGGACA+TGG | - | chr4.1:6550055-6550074 | MS.gene79455:CDS | 60.0% | |
| GCACAGCGCCCATACTGTCT+AGG | + | chr4.1:6547935-6547954 | None:intergenic | 60.0% | |
| GCAGAAACCGCTGCGAGAAC+AGG | - | chr4.1:6547855-6547874 | MS.gene79455:CDS | 60.0% | |
| TCGAGGATCTGCCAAAGCCC+TGG | - | chr4.1:6548189-6548208 | MS.gene79455:CDS | 60.0% | |
| TGTCCGGGACTATGCTCCAG+AGG | + | chr4.1:6550055-6550074 | None:intergenic | 60.0% | |
| ! | GGGAGGAGTATGCTTGGCGT+AGG | - | chr4.1:6547163-6547182 | MS.gene79455:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 6546289 | 6550108 | 6546289 | ID=MS.gene79455 |
| chr4.1 | mRNA | 6546289 | 6550108 | 6546289 | ID=MS.gene79455.t1;Parent=MS.gene79455 |
| chr4.1 | exon | 6550051 | 6550108 | 6550051 | ID=MS.gene79455.t1.exon1;Parent=MS.gene79455.t1 |
| chr4.1 | CDS | 6550051 | 6550108 | 6550051 | ID=cds.MS.gene79455.t1;Parent=MS.gene79455.t1 |
| chr4.1 | exon | 6549847 | 6549920 | 6549847 | ID=MS.gene79455.t1.exon2;Parent=MS.gene79455.t1 |
| chr4.1 | CDS | 6549847 | 6549920 | 6549847 | ID=cds.MS.gene79455.t1;Parent=MS.gene79455.t1 |
| chr4.1 | exon | 6549670 | 6549762 | 6549670 | ID=MS.gene79455.t1.exon3;Parent=MS.gene79455.t1 |
| chr4.1 | CDS | 6549670 | 6549762 | 6549670 | ID=cds.MS.gene79455.t1;Parent=MS.gene79455.t1 |
| chr4.1 | exon | 6549478 | 6549555 | 6549478 | ID=MS.gene79455.t1.exon4;Parent=MS.gene79455.t1 |
| chr4.1 | CDS | 6549478 | 6549555 | 6549478 | ID=cds.MS.gene79455.t1;Parent=MS.gene79455.t1 |
| chr4.1 | exon | 6549192 | 6549292 | 6549192 | ID=MS.gene79455.t1.exon5;Parent=MS.gene79455.t1 |
| chr4.1 | CDS | 6549192 | 6549292 | 6549192 | ID=cds.MS.gene79455.t1;Parent=MS.gene79455.t1 |
| chr4.1 | exon | 6548346 | 6548538 | 6548346 | ID=MS.gene79455.t1.exon6;Parent=MS.gene79455.t1 |
| chr4.1 | CDS | 6548346 | 6548538 | 6548346 | ID=cds.MS.gene79455.t1;Parent=MS.gene79455.t1 |
| chr4.1 | exon | 6548165 | 6548255 | 6548165 | ID=MS.gene79455.t1.exon7;Parent=MS.gene79455.t1 |
| chr4.1 | CDS | 6548165 | 6548255 | 6548165 | ID=cds.MS.gene79455.t1;Parent=MS.gene79455.t1 |
| chr4.1 | exon | 6548012 | 6548076 | 6548012 | ID=MS.gene79455.t1.exon8;Parent=MS.gene79455.t1 |
| chr4.1 | CDS | 6548012 | 6548076 | 6548012 | ID=cds.MS.gene79455.t1;Parent=MS.gene79455.t1 |
| chr4.1 | exon | 6547753 | 6547907 | 6547753 | ID=MS.gene79455.t1.exon9;Parent=MS.gene79455.t1 |
| chr4.1 | CDS | 6547753 | 6547907 | 6547753 | ID=cds.MS.gene79455.t1;Parent=MS.gene79455.t1 |
| chr4.1 | exon | 6547574 | 6547655 | 6547574 | ID=MS.gene79455.t1.exon10;Parent=MS.gene79455.t1 |
| chr4.1 | CDS | 6547574 | 6547655 | 6547574 | ID=cds.MS.gene79455.t1;Parent=MS.gene79455.t1 |
| chr4.1 | exon | 6547107 | 6547216 | 6547107 | ID=MS.gene79455.t1.exon11;Parent=MS.gene79455.t1 |
| chr4.1 | CDS | 6547107 | 6547216 | 6547107 | ID=cds.MS.gene79455.t1;Parent=MS.gene79455.t1 |
| chr4.1 | exon | 6546289 | 6546487 | 6546289 | ID=MS.gene79455.t1.exon12;Parent=MS.gene79455.t1 |
| chr4.1 | CDS | 6546289 | 6546487 | 6546289 | ID=cds.MS.gene79455.t1;Parent=MS.gene79455.t1 |
| Gene Sequence |
| Protein sequence |
