Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79562.t1 | XP_003621262.1 | 90.9 | 519 | 18 | 1 | 1 | 490 | 1 | 519 | 3.40E-258 | 900.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79562.t1 | P58223 | 27.8 | 533 | 289 | 15 | 25 | 482 | 13 | 524 | 4.5e-41 | 170.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79562.t1 | G7L217 | 90.9 | 519 | 18 | 1 | 1 | 490 | 1 | 519 | 2.5e-258 | 900.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049180 | MS.gene79562 | 0.807908 | 4.02E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79562.t1 | MTR_7g011080 | 91.225 | 547 | 19 | 1 | 1 | 518 | 1 | 547 | 0.0 | 993 |
| MS.gene79562.t1 | MTR_6g012630 | 64.364 | 550 | 149 | 10 | 1 | 517 | 1 | 536 | 0.0 | 610 |
| MS.gene79562.t1 | MTR_6g012630 | 64.364 | 550 | 149 | 10 | 1 | 517 | 1 | 536 | 0.0 | 608 |
| MS.gene79562.t1 | MTR_6g012630 | 64.009 | 439 | 113 | 8 | 1 | 406 | 1 | 427 | 8.60e-173 | 495 |
| MS.gene79562.t1 | MTR_6g012630 | 30.851 | 188 | 113 | 3 | 270 | 443 | 50 | 234 | 4.30e-21 | 96.3 |
| MS.gene79562.t1 | MTR_2g019090 | 31.204 | 548 | 281 | 17 | 21 | 495 | 22 | 546 | 4.57e-64 | 220 |
| MS.gene79562.t1 | MTR_2g019090 | 30.965 | 549 | 282 | 17 | 21 | 495 | 22 | 547 | 8.46e-64 | 219 |
| MS.gene79562.t1 | MTR_3g110650 | 33.750 | 480 | 222 | 11 | 27 | 430 | 15 | 474 | 2.64e-61 | 213 |
| MS.gene79562.t1 | MTR_4g093650 | 32.599 | 454 | 229 | 12 | 32 | 430 | 4 | 435 | 4.41e-57 | 201 |
| MS.gene79562.t1 | MTR_4g093650 | 32.487 | 197 | 107 | 5 | 13 | 208 | 242 | 413 | 2.80e-20 | 94.7 |
| MS.gene79562.t1 | MTR_4g008080 | 30.930 | 430 | 239 | 12 | 24 | 435 | 3 | 392 | 1.67e-49 | 180 |
| MS.gene79562.t1 | MTR_2g009650 | 29.091 | 385 | 228 | 10 | 52 | 430 | 155 | 500 | 5.42e-35 | 140 |
| MS.gene79562.t1 | MTR_2g009650 | 32.558 | 172 | 104 | 2 | 46 | 217 | 328 | 487 | 1.75e-24 | 108 |
| MS.gene79562.t1 | MTR_2g009650 | 24.306 | 432 | 240 | 13 | 25 | 424 | 27 | 403 | 5.18e-22 | 100 |
| MS.gene79562.t1 | MTR_2g009650 | 28.492 | 179 | 109 | 4 | 266 | 426 | 47 | 224 | 3.40e-12 | 69.7 |
| MS.gene79562.t1 | MTR_7g082290 | 50.888 | 169 | 48 | 5 | 329 | 497 | 12 | 145 | 8.98e-33 | 124 |
| MS.gene79562.t1 | MTR_5g031720 | 26.862 | 443 | 269 | 10 | 39 | 442 | 29 | 455 | 5.64e-32 | 130 |
| MS.gene79562.t1 | MTR_7g080630 | 29.167 | 264 | 153 | 9 | 48 | 302 | 99 | 337 | 3.65e-22 | 98.6 |
| MS.gene79562.t1 | MTR_7g080630 | 30.928 | 194 | 121 | 4 | 270 | 454 | 103 | 292 | 7.36e-14 | 73.6 |
| MS.gene79562.t1 | MTR_3g091800 | 35.294 | 170 | 107 | 2 | 49 | 217 | 63 | 230 | 4.78e-21 | 97.1 |
| MS.gene79562.t1 | MTR_3g091800 | 35.263 | 190 | 98 | 6 | 259 | 426 | 53 | 239 | 2.57e-19 | 91.7 |
| MS.gene79562.t1 | MTR_3g091800 | 30.114 | 176 | 116 | 4 | 256 | 430 | 319 | 488 | 7.86e-18 | 87.0 |
| MS.gene79562.t1 | MTR_3g091800 | 29.268 | 205 | 113 | 7 | 3 | 207 | 293 | 465 | 4.39e-16 | 81.6 |
| MS.gene79562.t1 | MTR_7g115340 | 33.708 | 178 | 100 | 5 | 48 | 225 | 46 | 205 | 6.25e-20 | 92.8 |
| MS.gene79562.t1 | MTR_7g115340 | 25.281 | 178 | 132 | 1 | 256 | 432 | 36 | 213 | 8.94e-16 | 80.1 |
| MS.gene79562.t1 | MTR_1g070380 | 33.529 | 170 | 100 | 3 | 48 | 217 | 164 | 320 | 1.11e-19 | 92.8 |
| MS.gene79562.t1 | MTR_1g070380 | 30.508 | 177 | 116 | 2 | 262 | 432 | 160 | 335 | 2.22e-15 | 79.3 |
| MS.gene79562.t1 | MTR_7g115340 | 33.708 | 178 | 100 | 5 | 48 | 225 | 114 | 273 | 1.54e-19 | 92.0 |
| MS.gene79562.t1 | MTR_7g115340 | 25.281 | 178 | 132 | 1 | 256 | 432 | 104 | 281 | 1.39e-15 | 79.7 |
| MS.gene79562.t1 | MTR_7g080630 | 31.609 | 174 | 102 | 4 | 48 | 217 | 99 | 259 | 6.65e-19 | 87.8 |
| MS.gene79562.t1 | MTR_7g080630 | 30.928 | 194 | 121 | 4 | 270 | 454 | 103 | 292 | 1.10e-13 | 72.4 |
| MS.gene79562.t1 | MTR_7g080630 | 31.609 | 174 | 102 | 4 | 48 | 217 | 99 | 259 | 1.36e-18 | 87.0 |
| MS.gene79562.t1 | MTR_7g080630 | 30.928 | 194 | 121 | 4 | 270 | 454 | 103 | 292 | 1.77e-13 | 71.6 |
| MS.gene79562.t1 | MTR_1g070380 | 33.333 | 171 | 100 | 4 | 48 | 217 | 164 | 321 | 2.71e-18 | 88.6 |
| MS.gene79562.t1 | MTR_1g070380 | 30.899 | 178 | 115 | 3 | 262 | 432 | 160 | 336 | 1.75e-14 | 76.6 |
| MS.gene79562.t1 | MTR_2g038020 | 31.250 | 176 | 109 | 2 | 48 | 223 | 69 | 232 | 5.07e-18 | 87.0 |
| MS.gene79562.t1 | MTR_2g038020 | 30.729 | 192 | 122 | 2 | 256 | 441 | 59 | 245 | 1.28e-17 | 85.9 |
| MS.gene79562.t1 | MTR_4g127380 | 35.542 | 166 | 94 | 3 | 30 | 195 | 26 | 178 | 9.77e-18 | 85.9 |
| MS.gene79562.t1 | MTR_4g127380 | 31.217 | 189 | 119 | 2 | 259 | 441 | 36 | 219 | 3.17e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79562.t1 | AT5G15270 | 55.888 | 535 | 190 | 10 | 11 | 518 | 17 | 532 | 0.0 | 560 |
| MS.gene79562.t1 | AT5G15270 | 55.916 | 524 | 185 | 10 | 11 | 507 | 17 | 521 | 0.0 | 548 |
| MS.gene79562.t1 | AT5G15270 | 55.916 | 524 | 185 | 10 | 11 | 507 | 17 | 521 | 0.0 | 548 |
| MS.gene79562.t1 | AT1G14170 | 48.373 | 461 | 193 | 9 | 26 | 463 | 25 | 463 | 6.98e-125 | 374 |
| MS.gene79562.t1 | AT1G14170 | 48.533 | 443 | 187 | 7 | 44 | 463 | 14 | 438 | 8.36e-124 | 370 |
| MS.gene79562.t1 | AT1G14170 | 48.747 | 439 | 184 | 7 | 48 | 463 | 10 | 430 | 6.08e-123 | 368 |
| MS.gene79562.t1 | AT5G46190 | 32.391 | 460 | 230 | 13 | 49 | 442 | 44 | 488 | 1.82e-60 | 210 |
| MS.gene79562.t1 | AT5G46190 | 32.391 | 460 | 230 | 13 | 49 | 442 | 44 | 488 | 1.82e-60 | 210 |
| MS.gene79562.t1 | AT5G46190 | 32.391 | 460 | 230 | 13 | 49 | 442 | 44 | 488 | 1.82e-60 | 210 |
| MS.gene79562.t1 | AT5G46190 | 32.391 | 460 | 230 | 13 | 49 | 442 | 44 | 488 | 7.40e-60 | 209 |
| MS.gene79562.t1 | AT1G51580 | 31.377 | 443 | 246 | 12 | 36 | 430 | 5 | 437 | 6.43e-55 | 195 |
| MS.gene79562.t1 | AT5G53060 | 28.767 | 438 | 262 | 10 | 38 | 432 | 57 | 487 | 1.21e-45 | 168 |
| MS.gene79562.t1 | AT5G53060 | 28.723 | 188 | 110 | 6 | 23 | 207 | 296 | 462 | 6.05e-13 | 71.6 |
| MS.gene79562.t1 | AT5G53060 | 28.767 | 438 | 262 | 10 | 38 | 432 | 57 | 487 | 5.12e-45 | 168 |
| MS.gene79562.t1 | AT5G53060 | 28.723 | 188 | 110 | 6 | 23 | 207 | 296 | 462 | 6.54e-13 | 71.6 |
| MS.gene79562.t1 | AT4G18375 | 26.962 | 497 | 249 | 19 | 32 | 508 | 128 | 530 | 7.93e-31 | 126 |
| MS.gene79562.t1 | AT4G18375 | 31.633 | 196 | 119 | 7 | 23 | 208 | 7 | 197 | 1.59e-22 | 101 |
| MS.gene79562.t1 | AT2G03110 | 49.612 | 129 | 61 | 3 | 82 | 207 | 1 | 128 | 8.83e-31 | 117 |
| MS.gene79562.t1 | AT2G03110 | 49.612 | 129 | 61 | 3 | 82 | 207 | 1 | 128 | 8.83e-31 | 117 |
| MS.gene79562.t1 | AT2G03110 | 49.612 | 129 | 61 | 3 | 82 | 207 | 1 | 128 | 8.83e-31 | 117 |
| MS.gene79562.t1 | AT4G18375 | 27.565 | 497 | 246 | 20 | 32 | 508 | 128 | 530 | 1.58e-30 | 125 |
| MS.gene79562.t1 | AT4G18375 | 31.633 | 196 | 119 | 7 | 23 | 208 | 7 | 197 | 1.55e-22 | 101 |
| MS.gene79562.t1 | AT4G18375 | 25.081 | 307 | 164 | 9 | 47 | 317 | 310 | 586 | 1.36e-16 | 83.2 |
| MS.gene79562.t1 | AT4G18375 | 33.688 | 282 | 130 | 11 | 235 | 508 | 85 | 317 | 1.28e-29 | 120 |
| MS.gene79562.t1 | AT4G18375 | 25.449 | 334 | 168 | 12 | 47 | 344 | 97 | 385 | 3.94e-17 | 84.0 |
| MS.gene79562.t1 | AT2G22600 | 27.983 | 461 | 263 | 15 | 26 | 433 | 2 | 446 | 6.30e-29 | 121 |
| MS.gene79562.t1 | AT5G64390 | 36.872 | 179 | 109 | 1 | 256 | 430 | 441 | 619 | 5.09e-27 | 116 |
| MS.gene79562.t1 | AT5G64390 | 33.516 | 182 | 103 | 4 | 38 | 217 | 441 | 606 | 1.08e-21 | 99.8 |
| MS.gene79562.t1 | AT5G64390 | 32.597 | 181 | 92 | 3 | 51 | 217 | 49 | 213 | 1.11e-19 | 93.2 |
| MS.gene79562.t1 | AT5G64390 | 33.152 | 184 | 79 | 6 | 268 | 421 | 48 | 217 | 2.27e-14 | 76.6 |
| MS.gene79562.t1 | AT5G64390 | 36.872 | 179 | 109 | 1 | 256 | 430 | 441 | 619 | 5.29e-27 | 115 |
| MS.gene79562.t1 | AT5G64390 | 33.516 | 182 | 103 | 4 | 38 | 217 | 441 | 606 | 1.12e-21 | 99.8 |
| MS.gene79562.t1 | AT5G64390 | 32.597 | 181 | 92 | 3 | 51 | 217 | 49 | 213 | 1.24e-19 | 93.2 |
| MS.gene79562.t1 | AT5G64390 | 33.152 | 184 | 79 | 6 | 268 | 421 | 48 | 217 | 2.37e-14 | 76.6 |
| MS.gene79562.t1 | AT5G64390 | 36.872 | 179 | 109 | 1 | 256 | 430 | 441 | 619 | 5.98e-27 | 115 |
| MS.gene79562.t1 | AT5G64390 | 33.516 | 182 | 103 | 4 | 38 | 217 | 441 | 606 | 1.17e-21 | 99.4 |
| MS.gene79562.t1 | AT5G64390 | 32.597 | 181 | 92 | 3 | 51 | 217 | 49 | 213 | 1.27e-19 | 93.2 |
| MS.gene79562.t1 | AT5G64390 | 33.152 | 184 | 79 | 6 | 268 | 421 | 48 | 217 | 2.54e-14 | 76.6 |
| MS.gene79562.t1 | AT3G04610 | 32.022 | 178 | 106 | 3 | 48 | 225 | 162 | 324 | 6.08e-21 | 96.7 |
| MS.gene79562.t1 | AT3G04610 | 27.528 | 178 | 125 | 1 | 259 | 432 | 155 | 332 | 7.50e-17 | 84.0 |
| MS.gene79562.t1 | AT3G04610 | 32.022 | 178 | 106 | 3 | 48 | 225 | 162 | 324 | 6.08e-21 | 96.7 |
| MS.gene79562.t1 | AT3G04610 | 27.528 | 178 | 125 | 1 | 259 | 432 | 155 | 332 | 7.50e-17 | 84.0 |
| MS.gene79562.t1 | AT3G04610 | 32.022 | 178 | 106 | 3 | 48 | 225 | 186 | 348 | 8.88e-21 | 96.3 |
| MS.gene79562.t1 | AT3G04610 | 27.528 | 178 | 125 | 1 | 259 | 432 | 179 | 356 | 1.02e-16 | 83.6 |
| MS.gene79562.t1 | AT3G04610 | 32.022 | 178 | 106 | 3 | 48 | 225 | 186 | 348 | 8.88e-21 | 96.3 |
| MS.gene79562.t1 | AT3G04610 | 27.528 | 178 | 125 | 1 | 259 | 432 | 179 | 356 | 1.02e-16 | 83.6 |
| MS.gene79562.t1 | AT4G26000 | 30.682 | 176 | 110 | 2 | 48 | 223 | 73 | 236 | 3.63e-19 | 90.9 |
| MS.gene79562.t1 | AT4G26000 | 32.222 | 180 | 114 | 3 | 259 | 431 | 66 | 244 | 3.92e-15 | 78.2 |
| MS.gene79562.t1 | AT5G09560 | 29.778 | 225 | 131 | 6 | 283 | 480 | 320 | 544 | 1.07e-14 | 77.4 |
| MS.gene79562.t1 | AT5G09560 | 26.570 | 207 | 120 | 6 | 16 | 217 | 279 | 458 | 5.76e-12 | 68.6 |
Find 0 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAAAAAAAATTAATTTT+TGG | - | 51520:2644-2663 | MS.gene79562:intron | 0.0% |
| !! | AAAGAATATGATATAATATT+TGG | - | 51520:2913-2932 | MS.gene79562:CDS | 10.0% |
| !! | AATAAAAAAAATCACTTGTT+AGG | + | 51520:3561-3580 | MS.gene79562:intergenic | 15.0% |
| !! | TTATTCAATGAATCTAAAAA+TGG | + | 51520:3487-3506 | MS.gene79562:intergenic | 15.0% |
| !! | TTTAATTATTGTTTCATATG+CGG | - | 51520:6160-6179 | MS.gene79562:CDS | 15.0% |
| !!! | AAGCTAATATTTTCAAATAA+CGG | - | 51520:4206-4225 | MS.gene79562:intron | 15.0% |
| !!! | ATGTATCTAAAGTATATTAT+AGG | + | 51520:3523-3542 | MS.gene79562:intergenic | 15.0% |
| !!! | TTTTTTTTTGCTTATAATAG+TGG | + | 51520:3215-3234 | MS.gene79562:intergenic | 15.0% |
| !! | ACAAAATATCAGAAAGATTA+GGG | + | 51520:3655-3674 | MS.gene79562:intergenic | 20.0% |
| !! | GTGGTATAATAAATCAAATT+AGG | - | 51520:5215-5234 | MS.gene79562:intron | 20.0% |
| !! | TAAAATCCTGGAAAAATTAA+TGG | + | 51520:6092-6111 | MS.gene79562:intergenic | 20.0% |
| !! | TATAATAAATCAAATTAGGC+AGG | - | 51520:5219-5238 | MS.gene79562:intron | 20.0% |
| !! | TGAATCACAAGTAATAATAT+TGG | - | 51520:3368-3387 | MS.gene79562:CDS | 20.0% |
| !!! | AATCAATTTGTTTTGTCATA+TGG | - | 51520:5353-5372 | MS.gene79562:intron | 20.0% |
| !!! | ATCAATTTGTTTTGTCATAT+GGG | - | 51520:5354-5373 | MS.gene79562:intron | 20.0% |
| !!! | ATTTTATGAGTTATGCTATT+GGG | - | 51520:2773-2792 | MS.gene79562:CDS | 20.0% |
| !!! | TATTTTATGAGTTATGCTAT+TGG | - | 51520:2772-2791 | MS.gene79562:CDS | 20.0% |
| ! | AATATTTGGTATTATCGAGT+CGG | - | 51520:2927-2946 | MS.gene79562:CDS | 25.0% |
| ! | ACATACAACAATTTCTCATT+CGG | + | 51520:4845-4864 | MS.gene79562:intergenic | 25.0% |
| ! | ATAGCAAAGTAGAATTTGAA+CGG | - | 51520:4388-4407 | MS.gene79562:intron | 25.0% |
| ! | CACAAAATATCAGAAAGATT+AGG | + | 51520:3656-3675 | MS.gene79562:intergenic | 25.0% |
| ! | TTATTATAATAGTGACCAGA+GGG | - | 51520:3576-3595 | MS.gene79562:intron | 25.0% |
| ! | TTTATTATAATAGTGACCAG+AGG | - | 51520:3575-3594 | MS.gene79562:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAG+TGG | + | 51520:4011-4030 | MS.gene79562:intergenic | 25.0% |
| !! | TTACAACCATTAATTTTTCC+AGG | - | 51520:6083-6102 | MS.gene79562:CDS | 25.0% |
| !! | TTCTCAATGCTTTTAGATTT+CGG | - | 51520:5786-5805 | MS.gene79562:intron | 25.0% |
| !! | TTGTGATGAACCTTTTTAAT+TGG | - | 51520:3885-3904 | MS.gene79562:intron | 25.0% |
| !!! | AAATATCAAGGTTGATAGTT+CGG | - | 51520:5252-5271 | MS.gene79562:intron | 25.0% |
| !!! | TCAAATGATTTTGAAGATTC+TGG | - | 51520:2506-2525 | MS.gene79562:CDS | 25.0% |
| !!! | TGGTTTTTTGCTTATAATAG+TGG | + | 51520:3467-3486 | MS.gene79562:intergenic | 25.0% |
| !!! | TGTGATGAACCTTTTTAATT+GGG | - | 51520:3886-3905 | MS.gene79562:intron | 25.0% |
| AATCTACAGCCCAATTAAAA+AGG | + | 51520:3898-3917 | MS.gene79562:intergenic | 30.0% | |
| ATATTGATCATGATCCACTT+TGG | - | 51520:3994-4013 | MS.gene79562:intron | 30.0% | |
| ATATTTGGTATTATCGAGTC+GGG | - | 51520:2928-2947 | MS.gene79562:CDS | 30.0% | |
| ATTAGAGTTTCTCAGTGTAT+GGG | - | 51520:2673-2692 | MS.gene79562:intron | 30.0% | |
| GCGTAATTCTTTAAGCTATT+TGG | - | 51520:2822-2841 | MS.gene79562:CDS | 30.0% | |
| GTATTAAATAGCATCCACAT+GGG | + | 51520:4419-4438 | MS.gene79562:intergenic | 30.0% | |
| TACGAAAACAACTTACTGTT+CGG | + | 51520:4596-4615 | MS.gene79562:intergenic | 30.0% | |
| TATAGAGCCTCTATTTGAAT+CGG | + | 51520:4678-4697 | MS.gene79562:intergenic | 30.0% | |
| TATTAGAGTTTCTCAGTGTA+TGG | - | 51520:2672-2691 | MS.gene79562:intron | 30.0% | |
| TATTCTTATTCTGATGGCTA+TGG | - | 51520:5997-6016 | MS.gene79562:CDS | 30.0% | |
| TTGTGATCTCTAATGTTATC+AGG | - | 51520:3671-3690 | MS.gene79562:intron | 30.0% | |
| ! | ATCAAATTTTATGCCGTGTT+TGG | - | 51520:3333-3352 | MS.gene79562:CDS | 30.0% |
| ! | CATCTTCAGTTGCAATTTTA+GGG | + | 51520:5662-5681 | MS.gene79562:intergenic | 30.0% |
| ! | GAGAGCAAATCTTTTTGATA+AGG | - | 51520:5858-5877 | MS.gene79562:CDS | 30.0% |
| ! | TCATCTTCAGTTGCAATTTT+AGG | + | 51520:5663-5682 | MS.gene79562:intergenic | 30.0% |
| ! | TCTCAATGCTTTTAGATTTC+GGG | - | 51520:5787-5806 | MS.gene79562:intron | 30.0% |
| ! | TTTTTGCTTATAATAGTGGC+CGG | + | 51520:3211-3230 | MS.gene79562:intergenic | 30.0% |
| !! | TTTTTCCAGGATTTTAAGTG+CGG | - | 51520:6096-6115 | MS.gene79562:CDS | 30.0% |
| !!! | AGATTGACAACATTTTTTCC+TGG | - | 51520:4512-4531 | MS.gene79562:intron | 30.0% |
| !!! | TGATGTCTTTTTTGGGAAAT+CGG | - | 51520:5724-5743 | MS.gene79562:intron | 30.0% |
| AAATTACTAGTTACACCCTC+TGG | + | 51520:3594-3613 | None:intergenic | 35.0% | |
| AATCAAATTAGGCAGGATTC+TGG | - | 51520:5226-5245 | MS.gene79562:intron | 35.0% | |
| AATGTTGTCAATCCAGATCA+CGG | + | 51520:4251-4270 | MS.gene79562:intergenic | 35.0% | |
| ACCATCTTTGCTTACAATAG+TGG | - | 51520:3244-3263 | MS.gene79562:CDS | 35.0% | |
| ACGAAAACAACTTACTGTTC+GGG | + | 51520:4595-4614 | MS.gene79562:intergenic | 35.0% | |
| AGCTTATGGAAGTTATGCTA+CGG | - | 51520:6209-6228 | MS.gene79562:CDS | 35.0% | |
| ATCAAATTAGGCAGGATTCT+GGG | - | 51520:5227-5246 | MS.gene79562:intron | 35.0% | |
| ATGAGTGTTTGTGTCATGTT+TGG | - | 51520:3073-3092 | MS.gene79562:intron | 35.0% | |
| CAATCATTACTGAGATGAGA+AGG | - | 51520:5595-5614 | MS.gene79562:intron | 35.0% | |
| CCTGAATCAATGTTGTCAAA+TGG | - | 51520:4166-4185 | MS.gene79562:intron | 35.0% | |
| CGTATTAAATAGCATCCACA+TGG | + | 51520:4420-4439 | MS.gene79562:intergenic | 35.0% | |
| CTTCATTTGTGAAACTGTTC+AGG | + | 51520:4625-4644 | MS.gene79562:intergenic | 35.0% | |
| GAATCAATGTTGTCAAATGG+CGG | - | 51520:4169-4188 | MS.gene79562:intron | 35.0% | |
| GAGAAAGTTGAAAGAGATTC+TGG | - | 51520:5501-5520 | MS.gene79562:intron | 35.0% | |
| GCTATTGAGATTGTTGAATC+TGG | - | 51520:3152-3171 | MS.gene79562:CDS | 35.0% | |
| GGATTATTCAGTGTCATATC+TGG | - | 51520:2794-2813 | MS.gene79562:CDS | 35.0% | |
| GGCAGATTGTTCAGAATATA+AGG | - | 51520:3769-3788 | MS.gene79562:intron | 35.0% | |
| GGGCATAAGAAATGATTGAA+TGG | - | 51520:5374-5393 | MS.gene79562:intron | 35.0% | |
| GTTATGTGAAATGTGTCTCT+TGG | + | 51520:2308-2327 | MS.gene79562:intergenic | 35.0% | |
| GTTCAACCACTCATGTAAAA+TGG | + | 51520:4474-4493 | MS.gene79562:intergenic | 35.0% | |
| TAACTTCCATAAGCTCCATA+AGG | + | 51520:6204-6223 | MS.gene79562:intergenic | 35.0% | |
| TAGCAGTTGGACAAACAAAT+CGG | + | 51520:5168-5187 | MS.gene79562:intergenic | 35.0% | |
| TGAAGATGAAGACGTTGATA+TGG | - | 51520:2604-2623 | MS.gene79562:CDS | 35.0% | |
| TGACTGCTTAATAGCCATTT+CGG | - | 51520:5288-5307 | MS.gene79562:intron | 35.0% | |
| TGATCTCTAATGTTATCAGG+TGG | - | 51520:3674-3693 | MS.gene79562:intron | 35.0% | |
| TGCAACTGAAGATGATGAAA+TGG | - | 51520:5668-5687 | MS.gene79562:intron | 35.0% | |
| TGCTTATAATAGTGGCCATA+GGG | + | 51520:3207-3226 | MS.gene79562:intergenic | 35.0% | |
| TGTGTTTATGCAGTTCTTTG+AGG | - | 51520:5425-5444 | MS.gene79562:intron | 35.0% | |
| TTAGGATTCTTAAGGATGAC+CGG | - | 51520:3811-3830 | MS.gene79562:intron | 35.0% | |
| TTATAATTCACTCACAGACG+CGG | + | 51520:3102-3121 | MS.gene79562:intergenic | 35.0% | |
| TTCAACTATGAAGGTAGAGA+TGG | - | 51520:5952-5971 | MS.gene79562:CDS | 35.0% | |
| TTGATCCTCCTTTACCAATA+AGG | + | 51520:5578-5597 | MS.gene79562:intergenic | 35.0% | |
| TTGCTTATAATAGTGGCCAT+AGG | + | 51520:3208-3227 | MS.gene79562:intergenic | 35.0% | |
| ! | AAACCACCATTTTACATGAG+TGG | - | 51520:4465-4484 | MS.gene79562:intron | 35.0% |
| ! | AAATGAGCCGATTCAAATAG+AGG | - | 51520:4668-4687 | MS.gene79562:CDS | 35.0% |
| ! | ACATTTTCCTGGAGAGTTTA+TGG | - | 51520:4266-4285 | MS.gene79562:intron | 35.0% |
| ! | ATTGGTTGCCTTATTGGTAA+AGG | - | 51520:5567-5586 | MS.gene79562:intron | 35.0% |
| ! | CTCAATGCTTTTAGATTTCG+GGG | - | 51520:5788-5807 | MS.gene79562:intron | 35.0% |
| ! | GTTCTTTGAGGATTCATTCT+CGG | - | 51520:5437-5456 | MS.gene79562:intron | 35.0% |
| ! | TCAATGCTTTTAGATTTCGG+GGG | - | 51520:5789-5808 | MS.gene79562:intron | 35.0% |
| ! | TGAGATTGCTGTTGTGAAAA+AGG | - | 51520:4899-4918 | MS.gene79562:intron | 35.0% |
| !! | ATTGGAGGTGTTATAGGTAA+GGG | - | 51520:5190-5209 | MS.gene79562:intron | 35.0% |
| !! | CCATTTGACAACATTGATTC+AGG | + | 51520:4169-4188 | MS.gene79562:intergenic | 35.0% |
| !! | GTTGTTTTCATAAGTTGTCC+TGG | - | 51520:4319-4338 | MS.gene79562:intron | 35.0% |
| !!! | CATTTTTTCCTGGAGAGTTA+TGG | - | 51520:4522-4541 | MS.gene79562:intron | 35.0% |
| !!! | GCTTGAGTGATGTCTTTTTT+GGG | - | 51520:5717-5736 | MS.gene79562:intron | 35.0% |
| !!! | TGCTTGAGTGATGTCTTTTT+TGG | - | 51520:5716-5735 | MS.gene79562:intron | 35.0% |
| AATCGGACTGAAAACTCCAT+CGG | + | 51520:5151-5170 | MS.gene79562:intergenic | 40.0% | |
| AATGTTATCAGGTGGATGGA+GGG | - | 51520:3682-3701 | MS.gene79562:intron | 40.0% | |
| ACAGACATGAACACCAAACA+CGG | + | 51520:3349-3368 | MS.gene79562:intergenic | 40.0% | |
| ACTTACTTCCATAACTCTCC+AGG | + | 51520:4533-4552 | MS.gene79562:intergenic | 40.0% | |
| AGCAAATGTTGAGTACGTGA+AGG | + | 51520:4960-4979 | MS.gene79562:intergenic | 40.0% | |
| ATCAGATTGGGTGTGTGATT+GGG | - | 51520:3739-3758 | MS.gene79562:intron | 40.0% | |
| ATGGAAGTTATGCTACGGAA+CGG | - | 51520:6214-6233 | MS.gene79562:CDS | 40.0% | |
| CAACCACTCATGTAAAATGG+TGG | + | 51520:4471-4490 | MS.gene79562:intergenic | 40.0% | |
| CAGAATATAAGGAGTGAGAC+TGG | - | 51520:3780-3799 | MS.gene79562:intron | 40.0% | |
| CCAGATGGTTTCAACTATGA+AGG | - | 51520:5943-5962 | MS.gene79562:CDS | 40.0% | |
| CCTTCATAGTTGAAACCATC+TGG | + | 51520:5946-5965 | MS.gene79562:intergenic | 40.0% | |
| CTCTAATGTTATCAGGTGGA+TGG | - | 51520:3678-3697 | MS.gene79562:intron | 40.0% | |
| CTTACTTCCATAAACTCTCC+AGG | + | 51520:4276-4295 | MS.gene79562:intergenic | 40.0% | |
| GAGATTGTTGAATCTGGTGT+CGG | - | 51520:3158-3177 | MS.gene79562:CDS | 40.0% | |
| GCAAATGTTGAGTACGTGAA+GGG | + | 51520:4959-4978 | MS.gene79562:intergenic | 40.0% | |
| GCCACTATTGTAAGCAAAGA+TGG | + | 51520:3248-3267 | MS.gene79562:intergenic | 40.0% | |
| GGATTATTGTCTGTGTGATG+AGG | - | 51520:2843-2862 | MS.gene79562:CDS | 40.0% | |
| GGTGGCTATTCTTATTCTGA+TGG | - | 51520:5991-6010 | MS.gene79562:CDS | 40.0% | |
| GTATTCTCTCTTTCACTAGC+CGG | - | 51520:5523-5542 | MS.gene79562:intron | 40.0% | |
| GTTGTCAATCTCACCCAAAA+TGG | + | 51520:4503-4522 | MS.gene79562:intergenic | 40.0% | |
| GTTTGTCCAACTGCTAACAT+TGG | - | 51520:5172-5191 | MS.gene79562:intron | 40.0% | |
| TAACATCCGCATCCTATCTA+AGG | - | 51520:5629-5648 | MS.gene79562:intron | 40.0% | |
| TAATGTTATCAGGTGGATGG+AGG | - | 51520:3681-3700 | MS.gene79562:intron | 40.0% | |
| TCAAATTAGGCAGGATTCTG+GGG | - | 51520:5228-5247 | MS.gene79562:intron | 40.0% | |
| TCAATCCAGATCACGGAAAA+TGG | + | 51520:4244-4263 | MS.gene79562:intergenic | 40.0% | |
| TCTCGAATTGGTTGCCTTAT+TGG | - | 51520:5561-5580 | MS.gene79562:intron | 40.0% | |
| TCTTATTCTGATGGCTATGG+AGG | - | 51520:6000-6019 | MS.gene79562:CDS | 40.0% | |
| TGAAGACGTTGATATGGAGA+AGG | - | 51520:2610-2629 | MS.gene79562:CDS | 40.0% | |
| TGAAGATGATGAAATGGTGC+AGG | - | 51520:5674-5693 | MS.gene79562:intron | 40.0% | |
| TGAGTTTATGTGTCCTGCTA+TGG | - | 51520:2529-2548 | MS.gene79562:CDS | 40.0% | |
| TGCGCAGATTAGGATTCTTA+AGG | - | 51520:3803-3822 | MS.gene79562:intron | 40.0% | |
| TGCTTACAATAGTGGCTGTA+GGG | - | 51520:3252-3271 | MS.gene79562:CDS | 40.0% | |
| TGGAAACTATGGAAGTTCAC+AGG | - | 51520:6053-6072 | MS.gene79562:CDS | 40.0% | |
| TTGCTTACAATAGTGGCTGT+AGG | - | 51520:3251-3270 | MS.gene79562:CDS | 40.0% | |
| TTTCAACTTTCTCACTGCAC+CGG | + | 51520:5494-5513 | MS.gene79562:intergenic | 40.0% | |
| ! | AAAAAGATTTGCTCTCAGCC+GGG | + | 51520:5854-5873 | MS.gene79562:intergenic | 40.0% |
| ! | CAAAAAGATTTGCTCTCAGC+CGG | + | 51520:5855-5874 | MS.gene79562:intergenic | 40.0% |
| ! | CTGGATTGACAACATTTTCC+TGG | - | 51520:4255-4274 | MS.gene79562:intron | 40.0% |
| ! | TGATGATGTTGACATGTCGA+AGG | - | 51520:2883-2902 | MS.gene79562:CDS | 40.0% |
| ! | TGTGAAAAAGGCTCTGATTC+AGG | - | 51520:4911-4930 | MS.gene79562:intron | 40.0% |
| ! | TTGTGATGAGCGTGTTGTTA+CGG | - | 51520:2463-2482 | MS.gene79562:CDS | 40.0% |
| !! | CATTGGAGGTGTTATAGGTA+AGG | - | 51520:5189-5208 | MS.gene79562:intron | 40.0% |
| !! | GCTAACATTGGAGGTGTTAT+AGG | - | 51520:5184-5203 | MS.gene79562:intron | 40.0% |
| !! | GTTGAACAAACCGCCATTTT+GGG | - | 51520:4487-4506 | MS.gene79562:intron | 40.0% |
| !! | TACGAAGTGTTGTCAAACAG+TGG | - | 51520:4436-4455 | MS.gene79562:intron | 40.0% |
| AATAGTGGCTGTAGGGTGTA+TGG | - | 51520:3259-3278 | MS.gene79562:CDS | 45.0% | |
| ACAACTCCGTCTTGATACGA+AGG | - | 51520:2409-2428 | MS.gene79562:CDS | 45.0% | |
| ACACCTCCAATGTTAGCAGT+TGG | + | 51520:5181-5200 | MS.gene79562:intergenic | 45.0% | |
| ACGAAGGCGAAGATTCGAAT+CGG | - | 51520:2425-2444 | MS.gene79562:CDS | 45.0% | |
| ATCGGAGCCATTCCCATAAT+TGG | + | 51520:5046-5065 | MS.gene79562:intergenic | 45.0% | |
| ATGATGAAATGGTGCAGGTG+AGG | - | 51520:5679-5698 | MS.gene79562:intron | 45.0% | |
| ATGTTATCAGGTGGATGGAG+GGG | - | 51520:3683-3702 | MS.gene79562:intron | 45.0% | |
| ATTATGGGAATGGCTCCGAT+TGG | - | 51520:5046-5065 | MS.gene79562:intron | 45.0% | |
| ATTGGGTGTGTGATTGGGAA+AGG | - | 51520:3744-3763 | MS.gene79562:intron | 45.0% | |
| CGTTTACCGTTACCTTTGTC+CGG | - | 51520:2340-2359 | MS.gene79562:intron | 45.0% | |
| CTCATCCGCACTTAAAATCC+TGG | + | 51520:6104-6123 | MS.gene79562:intergenic | 45.0% | |
| CTCTTGTGCAAGTACTTACC+CGG | - | 51520:5833-5852 | MS.gene79562:CDS | 45.0% | |
| GATCAGATTGGGTGTGTGAT+TGG | - | 51520:3738-3757 | MS.gene79562:intron | 45.0% | |
| GATCCTCCTTAGATAGGATG+CGG | + | 51520:5638-5657 | MS.gene79562:intergenic | 45.0% | |
| GATGAGGATGATGTGTGATG+AGG | - | 51520:2859-2878 | MS.gene79562:CDS | 45.0% | |
| GCAGGAAGATATGCAAGTAC+TGG | + | 51520:5910-5929 | MS.gene79562:intergenic | 45.0% | |
| GCTGGTCAAAGAACATCCTA+CGG | - | 51520:2197-2216 | MS.gene79562:CDS | 45.0% | |
| GCTTGTCAGGATTCATCAGA+AGG | - | 51520:2556-2575 | MS.gene79562:CDS | 45.0% | |
| GTCAATCTCACCCAAAATGG+CGG | + | 51520:4500-4519 | MS.gene79562:intergenic | 45.0% | |
| GTCTCTTGGAGTAGTTTCGT+CGG | + | 51520:2294-2313 | MS.gene79562:intergenic | 45.0% | |
| GTGATGTTGGAGACTATCCA+CGG | - | 51520:5092-5111 | MS.gene79562:intron | 45.0% | |
| TAGGGAGATCCTCCTTAGAT+AGG | + | 51520:5644-5663 | MS.gene79562:intergenic | 45.0% | |
| TCAGAGTTCAAAGCGCAAAG+CGG | + | 51520:3840-3859 | MS.gene79562:intergenic | 45.0% | |
| TCATCAGAAGGTGATTGCTG+AGG | - | 51520:2568-2587 | MS.gene79562:CDS | 45.0% | |
| TCTGCTGTCTGTGTCTGTAA+CGG | - | 51520:3422-3441 | MS.gene79562:CDS | 45.0% | |
| TCTTCGCCTTCGTATCAAGA+CGG | + | 51520:2418-2437 | MS.gene79562:intergenic | 45.0% | |
| TGATGTTGACATGTCGAAGG+TGG | - | 51520:2886-2905 | MS.gene79562:CDS | 45.0% | |
| TGCTTACTTCTGCAGTTCCT+GGG | - | 51520:4976-4995 | MS.gene79562:intron | 45.0% | |
| TGTCCAACTGCTAACATTGG+AGG | - | 51520:5175-5194 | MS.gene79562:intron | 45.0% | |
| TTCAACTTTCTCACTGCACC+GGG | + | 51520:5493-5512 | MS.gene79562:intergenic | 45.0% | |
| TTGAAACCATCTGGTCCTTC+TGG | + | 51520:5937-5956 | MS.gene79562:intergenic | 45.0% | |
| TTGCTTACTTCTGCAGTTCC+TGG | - | 51520:4975-4994 | MS.gene79562:intron | 45.0% | |
| TTGCTTATAATAGTGGCCGG+AGG | + | 51520:3460-3479 | MS.gene79562:intergenic | 45.0% | |
| TTGTCAAATGGCGGCTATTG+CGG | - | 51520:4178-4197 | MS.gene79562:intron | 45.0% | |
| TTGTGGCGTCTGATCAGATT+GGG | - | 51520:3727-3746 | MS.gene79562:intron | 45.0% | |
| TTGTTTCATATGCGGCAGCT+TGG | - | 51520:6168-6187 | MS.gene79562:CDS | 45.0% | |
| ! | AGTGATTTTGCATCTGGCGA+CGG | - | 51520:6027-6046 | MS.gene79562:CDS | 45.0% |
| ! | CGGACAAAGGTAACGGTAAA+CGG | + | 51520:2342-2361 | MS.gene79562:intergenic | 45.0% |
| ! | CTTTGTCCGGTTCGCAAAAT+CGG | - | 51520:2353-2372 | MS.gene79562:intron | 45.0% |
| ! | GGCTCAAGTGATTTTGCATC+TGG | - | 51520:6021-6040 | MS.gene79562:CDS | 45.0% |
| ! | GGTTGAACAAACCGCCATTT+TGG | - | 51520:4486-4505 | MS.gene79562:intron | 45.0% |
| ! | GGTTGCCTTATTGGTAAAGG+AGG | - | 51520:5570-5589 | MS.gene79562:intron | 45.0% |
| !! | AAAGGCTCTGATTCAGGTTG+CGG | - | 51520:4917-4936 | MS.gene79562:intron | 45.0% |
| !! | GAGTAGTTTCGTCGGTGTTA+GGG | + | 51520:2286-2305 | MS.gene79562:intergenic | 45.0% |
| !! | GGAAGATATGCAAGTACTGG+TGG | + | 51520:5907-5926 | MS.gene79562:intergenic | 45.0% |
| !! | GGATTCTGGGGCAAATATCA+AGG | - | 51520:5240-5259 | MS.gene79562:intron | 45.0% |
| !! | GTTGATAGTTCGGCAACTGA+AGG | - | 51520:5262-5281 | MS.gene79562:intron | 45.0% |
| !! | TTTCGTCGGTGTTAGGGTTA+CGG | + | 51520:2280-2299 | MS.gene79562:intergenic | 45.0% |
| !! | TTTGAACGGATTGTCCCATG+TGG | - | 51520:4402-4421 | MS.gene79562:intron | 45.0% |
| !!! | AACTGCCATTTTCCGTGATC+TGG | - | 51520:4236-4255 | MS.gene79562:intron | 45.0% |
| AAGGGATGAAGGTTCTCCGA+TGG | - | 51520:5132-5151 | MS.gene79562:intron | 50.0% | |
| AATAGCCATTTCGGCGAGAG+AGG | - | 51520:5297-5316 | MS.gene79562:intron | 50.0% | |
| ACAACACGCTCATCACAACC+AGG | + | 51520:2461-2480 | MS.gene79562:intergenic | 50.0% | |
| ACGGTGATTCGTACACCCTA+TGG | - | 51520:3189-3208 | MS.gene79562:CDS | 50.0% | |
| ACGGTGGTTCATACATCCTC+CGG | - | 51520:3441-3460 | MS.gene79562:intron | 50.0% | |
| AGAACCCACCATTGAACCAC+CGG | + | 51520:5011-5030 | MS.gene79562:intergenic | 50.0% | |
| ATTGCTGAGGATTTGCGTGG+TGG | - | 51520:2581-2600 | MS.gene79562:CDS | 50.0% | |
| CATCCGCATCCTATCTAAGG+AGG | - | 51520:5632-5651 | MS.gene79562:intron | 50.0% | |
| CCACGACACAGACACAAACA+CGG | + | 51520:2712-2731 | MS.gene79562:intergenic | 50.0% | |
| CGAATCGGTGAAACTGTTCC+TGG | - | 51520:2440-2459 | MS.gene79562:CDS | 50.0% | |
| CGCAAAATCGGCAGCATCAT+TGG | - | 51520:2365-2384 | MS.gene79562:intron | 50.0% | |
| CGTGTTTGTGTCTGTGTCGT+GGG | - | 51520:2710-2729 | MS.gene79562:intron | 50.0% | |
| CTATCCACGGTCCATGTATC+CGG | - | 51520:5105-5124 | MS.gene79562:intron | 50.0% | |
| CTCAGTGTATGGGTCGTGTT+TGG | - | 51520:2683-2702 | MS.gene79562:intron | 50.0% | |
| CTCTTTCACTAGCCGGTTAC+TGG | - | 51520:5530-5549 | MS.gene79562:intron | 50.0% | |
| CTTGTGGCGTCTGATCAGAT+TGG | - | 51520:3726-3745 | MS.gene79562:intron | 50.0% | |
| GAGAGCTTGACACCAGTAAC+CGG | + | 51520:5545-5564 | MS.gene79562:intergenic | 50.0% | |
| GCTTGACAACACTAAGCTCC+AGG | + | 51520:4340-4359 | MS.gene79562:intergenic | 50.0% | |
| GGCGACGGTTATGGAAACTA+TGG | - | 51520:6042-6061 | MS.gene79562:CDS | 50.0% | |
| GGGGGAACTAGATATTGCCA+AGG | - | 51520:5807-5826 | MS.gene79562:intron | 50.0% | |
| GGTAGAGATGGAAGACGACA+TGG | - | 51520:5964-5983 | MS.gene79562:CDS | 50.0% | |
| GGTGGTCCTTATGGAGCTTA+TGG | - | 51520:6195-6214 | MS.gene79562:CDS | 50.0% | |
| GGTGTGTGATTGGGAAAGGT+GGG | - | 51520:3748-3767 | MS.gene79562:intron | 50.0% | |
| GGTTACGGCGAAATTGCTTG+TGG | - | 51520:3710-3729 | MS.gene79562:intron | 50.0% | |
| GTGATTGCTGAGGATTTGCG+TGG | - | 51520:2578-2597 | MS.gene79562:CDS | 50.0% | |
| TATCCACGGTCCATGTATCC+GGG | - | 51520:5106-5125 | MS.gene79562:intron | 50.0% | |
| TATCTTCCTGCTTCGCCAGA+AGG | - | 51520:5919-5938 | MS.gene79562:CDS | 50.0% | |
| TCAACTTTCTCACTGCACCG+GGG | + | 51520:5492-5511 | MS.gene79562:intergenic | 50.0% | |
| TCGCTGAATCTGCAGATCTC+TGG | - | 51520:4876-4895 | MS.gene79562:intron | 50.0% | |
| TGCGAACCGGACAAAGGTAA+CGG | + | 51520:2349-2368 | MS.gene79562:intergenic | 50.0% | |
| TGGGGCTCCAATTATGGGAA+TGG | - | 51520:5036-5055 | MS.gene79562:intron | 50.0% | |
| TTCTACCTCTCTCGCCGAAA+TGG | + | 51520:5305-5324 | MS.gene79562:intergenic | 50.0% | |
| TTTGCATCTGGCGACGGTTA+TGG | - | 51520:6033-6052 | MS.gene79562:CDS | 50.0% | |
| ! | ATCAGTGCTGCTGACGTGTT+CGG | - | 51520:2982-3001 | MS.gene79562:CDS | 50.0% |
| ! | CATGGTGGGGCTCCAATTAT+GGG | - | 51520:5031-5050 | MS.gene79562:intron | 50.0% |
| ! | CGATTTTGCGAACCGGACAA+AGG | + | 51520:2355-2374 | MS.gene79562:intergenic | 50.0% |
| ! | CTGGTGTCAAGCTCTCGAAT+TGG | - | 51520:5549-5568 | MS.gene79562:intron | 50.0% |
| ! | GAACTCTGACGAGCTTGTTC+AGG | - | 51520:3851-3870 | MS.gene79562:intron | 50.0% |
| ! | GGAGTAGTTTCGTCGGTGTT+AGG | + | 51520:2287-2306 | MS.gene79562:intergenic | 50.0% |
| ! | GGATGGAGGGGATTTGGTTA+CGG | - | 51520:3695-3714 | MS.gene79562:intron | 50.0% |
| ! | GGGGGGTATAAAGGTGATGT+TGG | - | 51520:5079-5098 | MS.gene79562:intron | 50.0% |
| ! | GGTGGTTATGGGGGGTATAA+AGG | - | 51520:5070-5089 | MS.gene79562:intron | 50.0% |
| ! | GTGTGAACGTTTGTTGCCGT+AGG | + | 51520:2216-2235 | MS.gene79562:intergenic | 50.0% |
| ! | TCATGGTGGGGCTCCAATTA+TGG | - | 51520:5030-5049 | MS.gene79562:intron | 50.0% |
| !! | AACGGTAAACGGTGTCGTCT+TGG | + | 51520:2331-2350 | MS.gene79562:intergenic | 50.0% |
| !! | AATGGTGGGTTCTCATGGTG+GGG | - | 51520:5018-5037 | MS.gene79562:intron | 50.0% |
| !! | ACGGAACGGACTAGTACTTC+TGG | - | 51520:6228-6247 | MS.gene79562:CDS | 50.0% |
| !! | ACGGTAAACGGTGTCGTCTT+GGG | + | 51520:2330-2349 | MS.gene79562:intergenic | 50.0% |
| !! | AGGGTTACGGCGTTTGTTGT+TGG | + | 51520:2267-2286 | MS.gene79562:intergenic | 50.0% |
| !! | CAATGGTGGGTTCTCATGGT+GGG | - | 51520:5017-5036 | MS.gene79562:intron | 50.0% |
| !! | CTCCGATTGGTGGTGGTTAT+GGG | - | 51520:5059-5078 | MS.gene79562:intron | 50.0% |
| !! | GAACGGACTAGTACTTCTGG+AGG | - | 51520:6231-6250 | MS.gene79562:CDS | 50.0% |
| !! | GGAGGTGTTATAGGTAAGGG+CGG | - | 51520:5193-5212 | MS.gene79562:intron | 50.0% |
| !! | GGTTCAATGGTGGGTTCTCA+TGG | - | 51520:5013-5032 | MS.gene79562:intron | 50.0% |
| !! | TACTTGCACAAGAGCGTCCT+TGG | + | 51520:5827-5846 | MS.gene79562:intergenic | 50.0% |
| !! | TCAATGGTGGGTTCTCATGG+TGG | - | 51520:5016-5035 | MS.gene79562:intron | 50.0% |
| !! | TCCGATTGGTGGTGGTTATG+GGG | - | 51520:5060-5079 | MS.gene79562:intron | 50.0% |
| !! | TCTGGTGTCGGTGTTTGTGA+CGG | - | 51520:3170-3189 | MS.gene79562:CDS | 50.0% |
| !!! | ATGCTGCCGATTTTGCGAAC+CGG | + | 51520:2362-2381 | MS.gene79562:intergenic | 50.0% |
| ATCCCTTGAGCCCGGATACA+TGG | + | 51520:5119-5138 | MS.gene79562:intergenic | 55.0% | |
| ATGGGAATGGCTCCGATTGG+TGG | - | 51520:5049-5068 | MS.gene79562:intron | 55.0% | |
| CCCCCATAACCACCACCAAT+CGG | + | 51520:5064-5083 | MS.gene79562:intergenic | 55.0% | |
| CCGTGTTTGTGTCTGTGTCG+TGG | - | 51520:2709-2728 | MS.gene79562:intron | 55.0% | |
| CTGACAAGCGCATCCATAGC+AGG | + | 51520:2545-2564 | MS.gene79562:intergenic | 55.0% | |
| CTGCAGTTCCTGGGTGTATG+CGG | - | 51520:4985-5004 | MS.gene79562:intron | 55.0% | |
| CTGCTATGGATGCGCTTGTC+AGG | - | 51520:2543-2562 | MS.gene79562:CDS | 55.0% | |
| GAACCTTCATCCCTTGAGCC+CGG | + | 51520:5127-5146 | MS.gene79562:intergenic | 55.0% | |
| GATGGAAGACGACATGGACG+TGG | - | 51520:5970-5989 | MS.gene79562:CDS | 55.0% | |
| GCTGTCTGTGTCTGTAACGG+TGG | - | 51520:3425-3444 | MS.gene79562:CDS | 55.0% | |
| GGGTGTGTGATTGGGAAAGG+TGG | - | 51520:3747-3766 | MS.gene79562:intron | 55.0% | |
| GTCCATGTATCCGGGCTCAA+GGG | - | 51520:5114-5133 | MS.gene79562:intron | 55.0% | |
| GTGAGACTGGTGCGCAGATT+AGG | - | 51520:3793-3812 | MS.gene79562:intron | 55.0% | |
| TATCCGGGCTCAAGGGATGA+AGG | - | 51520:5121-5140 | MS.gene79562:intron | 55.0% | |
| TCAGGTGGATGGAGGGGATT+TGG | - | 51520:3689-3708 | MS.gene79562:intron | 55.0% | |
| ! | CAGCTGTGCTTTTGCAACCC+CGG | - | 51520:5472-5491 | MS.gene79562:intron | 55.0% |
| ! | GGTGTTATAGGTAAGGGCGG+TGG | - | 51520:5196-5215 | MS.gene79562:intron | 55.0% |
| !! | CCGATTGGTGGTGGTTATGG+GGG | - | 51520:5061-5080 | MS.gene79562:intron | 55.0% |
| !! | CGATTGGTGGTGGTTATGGG+GGG | - | 51520:5062-5081 | MS.gene79562:intron | 55.0% |
| !! | CTCTGATTCAGGTTGCGGCA+CGG | - | 51520:4922-4941 | MS.gene79562:intron | 55.0% |
| !! | GCTCCGATTGGTGGTGGTTA+TGG | - | 51520:5058-5077 | MS.gene79562:intron | 55.0% |
| AGTTCCTGGGTGTATGCGGC+CGG | - | 51520:4989-5008 | MS.gene79562:intron | 60.0% | |
| ATCGGCAGCATCATTGGCCG+CGG | - | 51520:2371-2390 | MS.gene79562:CDS | 60.0% | |
| GCTTCGCCAGAAGGACCAGA+TGG | - | 51520:5928-5947 | MS.gene79562:CDS | 60.0% | |
| GGAAGACGACATGGACGTGG+TGG | - | 51520:5973-5992 | MS.gene79562:CDS | 60.0% | |
| GGAATGGCTCCGATTGGTGG+TGG | - | 51520:5052-5071 | MS.gene79562:intron | 60.0% | |
| GGTCCATGTATCCGGGCTCA+AGG | - | 51520:5113-5132 | MS.gene79562:intron | 60.0% | |
| GTATGCGGCCGGTGGTTCAA+TGG | - | 51520:5000-5019 | MS.gene79562:intron | 60.0% | |
| TCAAAGCGCAAAGCGGCAGC+CGG | + | 51520:3833-3852 | MS.gene79562:intergenic | 60.0% | |
| TCTGGTCCTTCTGGCGAAGC+AGG | + | 51520:5928-5947 | MS.gene79562:intergenic | 60.0% | |
| TCTGTGTCGTGGGTCGTGCT+CGG | - | 51520:2720-2739 | MS.gene79562:intron | 60.0% | |
| GAGCCCGGATACATGGACCG+TGG | + | 51520:5112-5131 | MS.gene79562:intergenic | 65.0% | |
| GCGGCCGGTGGTTCAATGGT+GGG | - | 51520:5004-5023 | MS.gene79562:intron | 65.0% | |
| GTTTCACGATCTCGCCGCCG+CGG | + | 51520:2391-2410 | MS.gene79562:intergenic | 65.0% | |
| TGCGGCCGGTGGTTCAATGG+TGG | - | 51520:5003-5022 | MS.gene79562:intron | 65.0% | |
| ACCACCGGCCGCATACACCC+AGG | + | 51520:4996-5015 | MS.gene79562:intergenic | 70.0% | |
| GGCAGCATCATTGGCCGCGG+CGG | - | 51520:2374-2393 | MS.gene79562:CDS | 70.0% | |
| TCCTGGGTGTATGCGGCCGG+TGG | - | 51520:4992-5011 | MS.gene79562:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51520 | gene | 2194 | 6250 | 2194 | ID=MS.gene79562 |
| 51520 | mRNA | 2194 | 6250 | 2194 | ID=MS.gene79562.t1;Parent=MS.gene79562 |
| 51520 | exon | 5813 | 6250 | 5813 | ID=MS.gene79562.t1.exon1;Parent=MS.gene79562.t1 |
| 51520 | CDS | 5813 | 6250 | 5813 | ID=cds.MS.gene79562.t1;Parent=MS.gene79562.t1 |
| 51520 | exon | 4558 | 4751 | 4558 | ID=MS.gene79562.t1.exon2;Parent=MS.gene79562.t1 |
| 51520 | CDS | 4558 | 4751 | 4558 | ID=cds.MS.gene79562.t1;Parent=MS.gene79562.t1 |
| 51520 | exon | 3126 | 3453 | 3126 | ID=MS.gene79562.t1.exon3;Parent=MS.gene79562.t1 |
| 51520 | CDS | 3126 | 3453 | 3126 | ID=cds.MS.gene79562.t1;Parent=MS.gene79562.t1 |
| 51520 | exon | 2749 | 3006 | 2749 | ID=MS.gene79562.t1.exon4;Parent=MS.gene79562.t1 |
| 51520 | CDS | 2749 | 3006 | 2749 | ID=cds.MS.gene79562.t1;Parent=MS.gene79562.t1 |
| 51520 | exon | 2370 | 2642 | 2370 | ID=MS.gene79562.t1.exon5;Parent=MS.gene79562.t1 |
| 51520 | CDS | 2370 | 2642 | 2370 | ID=cds.MS.gene79562.t1;Parent=MS.gene79562.t1 |
| 51520 | exon | 2194 | 2258 | 2194 | ID=MS.gene79562.t1.exon6;Parent=MS.gene79562.t1 |
| 51520 | CDS | 2194 | 2258 | 2194 | ID=cds.MS.gene79562.t1;Parent=MS.gene79562.t1 |
| Gene Sequence |
| Protein sequence |
