Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79866.t1 | AXE71852.1 | 97.2 | 539 | 15 | 0 | 1 | 539 | 1 | 539 | 0.00E+00 | 1108.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79866.t1 | Q9SFU3 | 73.4 | 523 | 134 | 2 | 13 | 533 | 4 | 523 | 1.2e-241 | 837.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79866.t1 | A0A344X2G7 | 97.2 | 539 | 15 | 0 | 1 | 539 | 1 | 539 | 0.0e+00 | 1108.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05960 | MS.gene79866 | 0.804679 | 1.92E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79866.t1 | MTR_3g083810 | 95.556 | 540 | 24 | 0 | 1 | 540 | 1 | 540 | 0.0 | 1066 |
MS.gene79866.t1 | MTR_3g083820 | 92.393 | 539 | 41 | 0 | 1 | 539 | 1 | 539 | 0.0 | 1033 |
MS.gene79866.t1 | MTR_7g056403 | 76.494 | 502 | 118 | 0 | 32 | 533 | 31 | 532 | 0.0 | 841 |
MS.gene79866.t1 | MTR_6g013050 | 59.886 | 526 | 206 | 4 | 10 | 532 | 10 | 533 | 0.0 | 660 |
MS.gene79866.t1 | MTR_6g013050 | 59.878 | 491 | 194 | 3 | 10 | 499 | 10 | 498 | 0.0 | 616 |
MS.gene79866.t1 | MTR_1g060360 | 39.434 | 459 | 184 | 10 | 71 | 525 | 46 | 414 | 3.52e-96 | 299 |
MS.gene79866.t1 | MTR_3g051240 | 39.168 | 457 | 189 | 9 | 71 | 526 | 43 | 411 | 3.81e-94 | 294 |
MS.gene79866.t1 | MTR_7g104330 | 38.043 | 460 | 191 | 10 | 70 | 525 | 53 | 422 | 1.04e-91 | 288 |
MS.gene79866.t1 | MTR_5g092360 | 38.950 | 457 | 190 | 10 | 71 | 526 | 49 | 417 | 8.34e-89 | 280 |
MS.gene79866.t1 | MTR_7g104360 | 36.920 | 474 | 206 | 10 | 56 | 525 | 32 | 416 | 6.70e-87 | 275 |
MS.gene79866.t1 | MTR_4g037105 | 38.481 | 395 | 168 | 9 | 143 | 521 | 109 | 444 | 4.92e-76 | 248 |
MS.gene79866.t1 | MTR_0188s0020 | 37.065 | 402 | 178 | 9 | 143 | 528 | 115 | 457 | 1.99e-74 | 244 |
MS.gene79866.t1 | MTR_4g115670 | 34.406 | 497 | 224 | 13 | 52 | 528 | 36 | 450 | 9.50e-74 | 242 |
MS.gene79866.t1 | MTR_1g112630 | 37.215 | 395 | 173 | 9 | 143 | 521 | 111 | 446 | 3.41e-71 | 235 |
MS.gene79866.t1 | MTR_5g045600 | 26.617 | 402 | 213 | 16 | 76 | 432 | 181 | 545 | 4.13e-25 | 109 |
MS.gene79866.t1 | MTR_1g052505 | 25.622 | 402 | 217 | 16 | 77 | 442 | 201 | 556 | 3.05e-24 | 107 |
MS.gene79866.t1 | MTR_4g037670 | 25.316 | 395 | 224 | 11 | 77 | 442 | 223 | 575 | 4.56e-24 | 106 |
MS.gene79866.t1 | MTR_8g063080 | 27.114 | 402 | 211 | 17 | 76 | 432 | 174 | 538 | 1.21e-23 | 105 |
MS.gene79866.t1 | MTR_4g103520 | 27.628 | 333 | 164 | 12 | 147 | 433 | 176 | 477 | 2.43e-22 | 100 |
MS.gene79866.t1 | MTR_4g103520 | 27.628 | 333 | 164 | 12 | 147 | 433 | 253 | 554 | 3.13e-22 | 100 |
MS.gene79866.t1 | MTR_3g074930 | 26.284 | 331 | 171 | 11 | 147 | 433 | 249 | 550 | 2.19e-20 | 95.1 |
MS.gene79866.t1 | MTR_3g074930 | 26.126 | 333 | 169 | 11 | 147 | 433 | 256 | 557 | 2.28e-20 | 95.1 |
MS.gene79866.t1 | MTR_4g082930 | 27.363 | 402 | 203 | 15 | 66 | 422 | 139 | 496 | 3.26e-20 | 94.7 |
MS.gene79866.t1 | MTR_4g082940 | 26.582 | 395 | 195 | 17 | 69 | 422 | 142 | 482 | 5.55e-18 | 87.8 |
MS.gene79866.t1 | MTR_3g074970 | 23.002 | 413 | 183 | 13 | 147 | 527 | 198 | 507 | 8.93e-16 | 80.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79866.t1 | AT3G07130 | 74.851 | 505 | 124 | 1 | 29 | 533 | 22 | 523 | 0.0 | 805 |
MS.gene79866.t1 | AT3G07130 | 70.260 | 538 | 124 | 2 | 29 | 533 | 22 | 556 | 0.0 | 788 |
MS.gene79866.t1 | AT2G32770 | 59.150 | 541 | 196 | 10 | 12 | 532 | 6 | 541 | 0.0 | 620 |
MS.gene79866.t1 | AT2G32770 | 55.268 | 541 | 188 | 11 | 12 | 532 | 6 | 512 | 0.0 | 566 |
MS.gene79866.t1 | AT4G13700 | 57.047 | 447 | 183 | 4 | 4 | 448 | 3 | 442 | 0.0 | 526 |
MS.gene79866.t1 | AT2G32770 | 59.070 | 430 | 157 | 7 | 85 | 499 | 2 | 427 | 4.26e-174 | 498 |
MS.gene79866.t1 | AT4G13700 | 54.815 | 405 | 174 | 4 | 4 | 406 | 3 | 400 | 6.78e-156 | 451 |
MS.gene79866.t1 | AT3G52820 | 39.019 | 469 | 192 | 10 | 61 | 525 | 37 | 415 | 4.91e-99 | 306 |
MS.gene79866.t1 | AT3G52810 | 38.280 | 465 | 197 | 9 | 61 | 523 | 41 | 417 | 1.91e-96 | 300 |
MS.gene79866.t1 | AT3G52780 | 39.434 | 459 | 188 | 10 | 71 | 525 | 44 | 416 | 6.09e-93 | 291 |
MS.gene79866.t1 | AT3G20500 | 37.263 | 475 | 200 | 11 | 71 | 539 | 47 | 429 | 2.29e-90 | 284 |
MS.gene79866.t1 | AT2G16430 | 33.088 | 544 | 253 | 16 | 1 | 525 | 1 | 452 | 7.46e-75 | 245 |
MS.gene79866.t1 | AT2G27190 | 33.395 | 539 | 248 | 17 | 10 | 528 | 9 | 456 | 4.43e-74 | 243 |
MS.gene79866.t1 | AT1G56360 | 34.884 | 473 | 216 | 15 | 71 | 525 | 50 | 448 | 1.38e-73 | 241 |
MS.gene79866.t1 | AT5G34850 | 32.996 | 494 | 235 | 14 | 52 | 528 | 35 | 449 | 1.94e-69 | 231 |
MS.gene79866.t1 | AT3G52780 | 41.108 | 343 | 148 | 9 | 71 | 409 | 44 | 336 | 2.14e-68 | 224 |
MS.gene79866.t1 | AT2G16430 | 36.082 | 388 | 173 | 9 | 157 | 528 | 7 | 335 | 1.98e-67 | 222 |
MS.gene79866.t1 | AT4G36350 | 33.404 | 473 | 222 | 13 | 71 | 525 | 51 | 448 | 3.06e-67 | 225 |
MS.gene79866.t1 | AT2G18130 | 34.080 | 402 | 169 | 11 | 143 | 528 | 111 | 432 | 2.23e-58 | 201 |
MS.gene79866.t1 | AT3G46120 | 32.698 | 315 | 116 | 8 | 213 | 514 | 130 | 361 | 1.89e-37 | 142 |
MS.gene79866.t1 | AT5G50400 | 25.926 | 405 | 214 | 16 | 76 | 433 | 101 | 466 | 7.44e-26 | 111 |
MS.gene79866.t1 | AT5G50400 | 25.926 | 405 | 214 | 16 | 76 | 433 | 173 | 538 | 9.22e-26 | 112 |
MS.gene79866.t1 | AT2G03450 | 26.190 | 420 | 209 | 16 | 70 | 433 | 142 | 516 | 8.49e-22 | 99.8 |
MS.gene79866.t1 | AT1G13900 | 24.819 | 415 | 215 | 14 | 71 | 432 | 145 | 515 | 2.78e-21 | 98.2 |
MS.gene79866.t1 | AT4G24890 | 24.384 | 406 | 219 | 15 | 76 | 433 | 177 | 542 | 5.77e-21 | 97.1 |
MS.gene79866.t1 | AT1G13750 | 26.203 | 374 | 206 | 16 | 76 | 415 | 175 | 512 | 3.59e-18 | 88.6 |
MS.gene79866.t1 | AT1G52940 | 31.443 | 194 | 105 | 6 | 143 | 332 | 72 | 241 | 8.92e-18 | 83.6 |
Find 149 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTCTATATTGTCCCCAATT+TGG | 0.191812 | 3.1:-65713639 | None:intergenic |
AATTTATCTGGTGTAGTTAA+TGG | 0.192467 | 3.1:-65716589 | None:intergenic |
ATCAACCACGATGGGATTAT+TGG | 0.201961 | 3.1:+65715743 | MS.gene79866:CDS |
ACTATGCTACCAACTGTTTC+AGG | 0.206870 | 3.1:-65713670 | None:intergenic |
ATGACTCTATTTGGATTTCT+TGG | 0.207397 | 3.1:+65711005 | MS.gene79866:CDS |
CTGCCTCCTATGACTCTATT+TGG | 0.210095 | 3.1:+65710996 | MS.gene79866:CDS |
ATTTGGATTTCTTGGATTAC+AGG | 0.214411 | 3.1:+65711013 | MS.gene79866:CDS |
TTCAGAACAATGCCGGTTTC+AGG | 0.217305 | 3.1:+65715511 | MS.gene79866:CDS |
TTTGCAGGGGAATTCCAAAT+TGG | 0.249933 | 3.1:+65713625 | MS.gene79866:intron |
TGTACCTCCTCTGGCTTAAC+TGG | 0.252345 | 3.1:-65716912 | None:intergenic |
AGTGAGAGAGAGATTTGTTC+AGG | 0.264796 | 3.1:-65710971 | None:intergenic |
AAACTCATGCATTATGGATT+TGG | 0.267207 | 3.1:+65716817 | MS.gene79866:CDS |
TTAACTGGTGGACACTTATC+AGG | 0.273283 | 3.1:-65716897 | None:intergenic |
CAAATGGTTGGAAAAGGATT+TGG | 0.284128 | 3.1:+65716185 | MS.gene79866:CDS |
AGAATGAAACTCATGCATTA+TGG | 0.316248 | 3.1:+65716811 | MS.gene79866:CDS |
CTAAGTTCAATCCTTGTTCA+TGG | 0.342355 | 3.1:+65710818 | MS.gene79866:CDS |
CCAACTGTTTCAGGATTTAA+CGG | 0.342841 | 3.1:-65713661 | None:intergenic |
ATTCCCTTCTATTACCATTA+CGG | 0.348130 | 3.1:-65715890 | None:intergenic |
TCTGGTGTAGTTAATGGTTC+AGG | 0.348384 | 3.1:-65716583 | None:intergenic |
TCAACCACGATGGGATTATT+GGG | 0.353832 | 3.1:+65715744 | MS.gene79866:CDS |
TTCCCTTCTATTACCATTAC+GGG | 0.355427 | 3.1:-65715889 | None:intergenic |
GAAGATTTACTATATAAATA+TGG | 0.358061 | 3.1:+65716318 | MS.gene79866:CDS |
CAGTTGGTGACGGTGGTAAT+CGG | 0.364627 | 3.1:+65716518 | MS.gene79866:CDS |
AAGCCTCTCATAAATTTATC+TGG | 0.365817 | 3.1:-65716601 | None:intergenic |
AATGGTTCAGGACAGTTTCC+TGG | 0.369240 | 3.1:-65716571 | None:intergenic |
GTGATGAAATTTACATTGTT+AGG | 0.371981 | 3.1:+65716871 | MS.gene79866:CDS |
GTCCCCGTAATGGTAATAGA+AGG | 0.374867 | 3.1:+65715886 | MS.gene79866:CDS |
AGAAATCCAAATAGAGTCAT+AGG | 0.379081 | 3.1:-65711002 | None:intergenic |
CAACAGAATTTACCTGTTGC+TGG | 0.382998 | 3.1:-65716649 | None:intergenic |
GGTGTTGACATTGTCTTTAA+CGG | 0.387443 | 3.1:+65716339 | MS.gene79866:CDS |
GGACTTCAGAACTATACTTC+TGG | 0.390703 | 3.1:+65713775 | MS.gene79866:CDS |
ATTCTGCTAGGGTAACTCTT+GGG | 0.401449 | 3.1:-65715535 | None:intergenic |
CTTGTTCAAAGAAACGTTGA+AGG | 0.404171 | 3.1:+65710941 | MS.gene79866:CDS |
AGGATTTGGCTTCTCTTGAC+AGG | 0.407338 | 3.1:+65716199 | MS.gene79866:CDS |
ATAGTTCAATATGGAAGGTT+TGG | 0.408192 | 3.1:+65713688 | MS.gene79866:CDS |
TTATATTATTCTTTCAATGC+TGG | 0.411394 | 3.1:+65716006 | MS.gene79866:CDS |
TTGCAGGGGAATTCCAAATT+GGG | 0.411932 | 3.1:+65713626 | MS.gene79866:intron |
GTTGGTAGCATAGTTCAATA+TGG | 0.412379 | 3.1:+65713679 | MS.gene79866:CDS |
CCTGATCTTATTCTGTTGGT+TGG | 0.419594 | 3.1:+65715628 | MS.gene79866:CDS |
GCTAACATGTATCTTACTAA+TGG | 0.431678 | 3.1:+65715664 | MS.gene79866:CDS |
TGATATTGATATAGTGTGTT+GGG | 0.437466 | 3.1:-65715445 | None:intergenic |
TATTTATTTATTCAGGTACA+TGG | 0.440064 | 3.1:+65715846 | MS.gene79866:intron |
ATCGTGGTTGATATGTTTCA+TGG | 0.444214 | 3.1:-65715732 | None:intergenic |
TCATCCTGATCTTATTCTGT+TGG | 0.448192 | 3.1:+65715624 | MS.gene79866:CDS |
GATTCTGCTAGGGTAACTCT+TGG | 0.450391 | 3.1:-65715536 | None:intergenic |
AGTTGGTGACGGTGGTAATC+GGG | 0.450621 | 3.1:+65716519 | MS.gene79866:CDS |
TCACCAACTGTGATATAAAC+AGG | 0.450798 | 3.1:-65716505 | None:intergenic |
CGCGAAAGCAGCTTCGGTCA+TGG | 0.456698 | 3.1:+65716700 | MS.gene79866:CDS |
AACCGCAATCAAGACTTGTA+TGG | 0.458850 | 3.1:+65716840 | MS.gene79866:CDS |
TCGCGAAAAGCACTATAATC+AGG | 0.460017 | 3.1:-65716682 | None:intergenic |
GAATTTACCTGTTGCTGGAC+CGG | 0.464464 | 3.1:-65716644 | None:intergenic |
TCAATACAAATGGTTGGAAA+AGG | 0.467825 | 3.1:+65716179 | MS.gene79866:CDS |
TAACTCTTGGGGCCTGAAAC+CGG | 0.468431 | 3.1:-65715523 | None:intergenic |
ATAGAGAAGCGGAGTGTATG+AGG | 0.471491 | 3.1:+65716286 | MS.gene79866:CDS |
TACATATCATACGACAAATC+AGG | 0.480296 | 3.1:+65716057 | MS.gene79866:CDS |
GATTTCTAGTGTCCCCGTAA+TGG | 0.483412 | 3.1:+65715876 | MS.gene79866:CDS |
ATGTATCTTACTAATGGTAC+TGG | 0.488834 | 3.1:+65715670 | MS.gene79866:CDS |
GCGAAAGCAGCTTCGGTCAT+GGG | 0.495435 | 3.1:+65716701 | MS.gene79866:CDS |
TGAACAAGAGGATCTGTGTC+TGG | 0.496265 | 3.1:-65710926 | None:intergenic |
TTGTCAAGAGGTACTGTCAC+AGG | 0.497889 | 3.1:-65710875 | None:intergenic |
TTGCAGGGGATCAATACAAA+TGG | 0.501518 | 3.1:+65716169 | MS.gene79866:intron |
CGGTGGTAATCGGGAAAAGA+TGG | 0.501818 | 3.1:+65716528 | MS.gene79866:CDS |
CCAACCACCGCGATTCTGCT+AGG | 0.502397 | 3.1:-65715547 | None:intergenic |
AGGTACTGTCACAGGCTTGA+AGG | 0.506821 | 3.1:-65710867 | None:intergenic |
TTGATATTGATATAGTGTGT+TGG | 0.509010 | 3.1:-65715446 | None:intergenic |
TACACGGTTTGATCTCTCAT+AGG | 0.516734 | 3.1:-65716455 | None:intergenic |
TAGTTCTGAAGTCCTTGAAA+AGG | 0.516901 | 3.1:-65713766 | None:intergenic |
CCTAGCAGAATCGCGGTGGT+TGG | 0.516976 | 3.1:+65715547 | MS.gene79866:CDS |
CAGCAACAGGTAAATTCTGT+TGG | 0.517767 | 3.1:+65716650 | MS.gene79866:CDS |
TCAACGTTTCTTTGAACAAG+AGG | 0.519536 | 3.1:-65710938 | None:intergenic |
TGATTTGTCGTATGATATGT+AGG | 0.519583 | 3.1:-65716055 | None:intergenic |
ATCGCGGTGGTTGGAGACTT+AGG | 0.520583 | 3.1:+65715556 | MS.gene79866:CDS |
ATACATCATGTTCGTCTCAC+AGG | 0.522981 | 3.1:+65713802 | MS.gene79866:CDS |
AGCAACAGGTAAATTCTGTT+GGG | 0.525098 | 3.1:+65716651 | MS.gene79866:CDS |
CAAGACTTGTATGGGACCGC+TGG | 0.527642 | 3.1:+65716849 | MS.gene79866:CDS |
TTCAATATGGAAGGTTTGGA+AGG | 0.529875 | 3.1:+65713692 | MS.gene79866:CDS |
TCACTCATTGCTGACAAAGA+AGG | 0.529974 | 3.1:-65715478 | None:intergenic |
GTAGCATAGTTCAATATGGA+AGG | 0.530620 | 3.1:+65713683 | MS.gene79866:CDS |
TCATTATTTCAGAACAATGC+CGG | 0.532674 | 3.1:+65715504 | MS.gene79866:CDS |
CAGGGAAGTAACTCCGTGGC+TGG | 0.534766 | 3.1:+65716218 | MS.gene79866:CDS |
AGAGACAGTGTAACAATATG+AGG | 0.536590 | 3.1:-65710782 | None:intergenic |
GTCAATGAATGGCCAAGCTG+TGG | 0.543400 | 3.1:+65713714 | MS.gene79866:CDS |
GTTTATATCACAGTTGGTGA+CGG | 0.553418 | 3.1:+65716508 | MS.gene79866:CDS |
GGTTGATATGTTTCATGGAT+GGG | 0.554763 | 3.1:-65715727 | None:intergenic |
TATTATTCTTTCAATGCTGG+AGG | 0.555597 | 3.1:+65716009 | MS.gene79866:CDS |
CATTTCCGTCGGAAGAGAGT+GGG | 0.556408 | 3.1:+65715971 | MS.gene79866:CDS |
ACCTCCTCTGGCTTAACTGG+TGG | 0.558777 | 3.1:-65716909 | None:intergenic |
TGGTTGATATGTTTCATGGA+TGG | 0.559252 | 3.1:-65715728 | None:intergenic |
CAACCACCGCGATTCTGCTA+GGG | 0.562235 | 3.1:-65715546 | None:intergenic |
CCAACCAACAGAATAAGATC+AGG | 0.563868 | 3.1:-65715628 | None:intergenic |
ACCGCAATCAAGACTTGTAT+GGG | 0.564499 | 3.1:+65716841 | MS.gene79866:CDS |
TTCTGCTAGGGTAACTCTTG+GGG | 0.564752 | 3.1:-65715534 | None:intergenic |
CCTCTTGACAAAAGCTTCCG+TGG | 0.571913 | 3.1:+65710887 | MS.gene79866:CDS |
GGTACTGTCACAGGCTTGAA+GGG | 0.572943 | 3.1:-65710866 | None:intergenic |
AAGCACTATAATCAGGCTGT+TGG | 0.574180 | 3.1:-65716675 | None:intergenic |
GCATTTCCGTCGGAAGAGAG+TGG | 0.574813 | 3.1:+65715970 | MS.gene79866:CDS |
TGCAGGGGAATTCCAAATTG+GGG | 0.575325 | 3.1:+65713627 | MS.gene79866:intron |
AGGTTTGGAAGGTCAATGAA+TGG | 0.576434 | 3.1:+65713703 | MS.gene79866:CDS |
CAAGGGAATAACCCACAGCT+TGG | 0.584037 | 3.1:-65713726 | None:intergenic |
ATTACTCATGCAGATGAACC+AGG | 0.587346 | 3.1:+65716553 | MS.gene79866:CDS |
GGAGTTCTAACCACACTGGA+TGG | 0.588226 | 3.1:+65710842 | MS.gene79866:CDS |
GGTCCTGTTTATATCACAGT+TGG | 0.588794 | 3.1:+65716502 | MS.gene79866:CDS |
CAAGTCACATTATAGAGAAG+CGG | 0.590594 | 3.1:+65716275 | MS.gene79866:CDS |
ACGGGGACACTAGAAATCAA+TGG | 0.590984 | 3.1:-65715871 | None:intergenic |
TCAATGAATGGCCAAGCTGT+GGG | 0.592838 | 3.1:+65713715 | MS.gene79866:CDS |
TGTGATATAAACAGGACCGC+AGG | 0.599420 | 3.1:-65716497 | None:intergenic |
TGAAACATATCAACCACGAT+GGG | 0.599485 | 3.1:+65715735 | MS.gene79866:CDS |
TGCCACGTAGCTACCAGCCA+CGG | 0.601862 | 3.1:-65716231 | None:intergenic |
CACGATGGGATTATTGGGGA+AGG | 0.603522 | 3.1:+65715749 | MS.gene79866:CDS |
AGGGGATCAATACAAATGGT+TGG | 0.605512 | 3.1:+65716173 | MS.gene79866:intron |
CCGTTAAATCCTGAAACAGT+TGG | 0.609473 | 3.1:+65713661 | MS.gene79866:CDS |
CCAATGTGTAGTTATATACA+CGG | 0.612057 | 3.1:-65716471 | None:intergenic |
TTCTCGATTTGCATTTCCGT+CGG | 0.613715 | 3.1:+65715960 | MS.gene79866:CDS |
AATCCAAATAGAGTCATAGG+AGG | 0.616544 | 3.1:-65710999 | None:intergenic |
AAGCTTCCGTGGAAATGCTG+TGG | 0.617188 | 3.1:+65710898 | MS.gene79866:CDS |
TAGCTACGTGGCATGCACCT+TGG | 0.617237 | 3.1:+65716241 | MS.gene79866:CDS |
TCCCCGTAATGGTAATAGAA+GGG | 0.617941 | 3.1:+65715887 | MS.gene79866:CDS |
GTGATATAAACAGGACCGCA+GGG | 0.618037 | 3.1:-65716496 | None:intergenic |
GGATTTGGCTTCTCTTGACA+GGG | 0.619928 | 3.1:+65716200 | MS.gene79866:CDS |
ACACCAGATAAATTTATGAG+AGG | 0.624521 | 3.1:+65716598 | MS.gene79866:CDS |
AGTTCAATCCTTGTTCATGG+TGG | 0.629550 | 3.1:+65710821 | MS.gene79866:CDS |
TCCCATACAAGTCTTGATTG+CGG | 0.630219 | 3.1:-65716842 | None:intergenic |
GATGACCCACTCTCTTCCGA+CGG | 0.633166 | 3.1:-65715976 | None:intergenic |
TAGAGAAGCGGAGTGTATGA+GGG | 0.635021 | 3.1:+65716287 | MS.gene79866:CDS |
CAACCACGATGGGATTATTG+GGG | 0.638187 | 3.1:+65715745 | MS.gene79866:CDS |
GGAGTGTATGAGGGTCGAGA+TGG | 0.640358 | 3.1:+65716296 | MS.gene79866:CDS |
TATATCACAGTTGGTGACGG+TGG | 0.644765 | 3.1:+65716511 | MS.gene79866:CDS |
ATGAAACATATCAACCACGA+TGG | 0.646107 | 3.1:+65715734 | MS.gene79866:CDS |
GTATGTCCACAGCATTTCCA+CGG | 0.646393 | 3.1:-65710904 | None:intergenic |
GTGTCCACCAGTTAAGCCAG+AGG | 0.649880 | 3.1:+65716905 | MS.gene79866:CDS |
TTAGAACTCCACCATGAACA+AGG | 0.653632 | 3.1:-65710829 | None:intergenic |
TGGTGGAGTTCTAACCACAC+TGG | 0.653960 | 3.1:+65710838 | MS.gene79866:CDS |
CCGTGTATATAACTACACAT+TGG | 0.657117 | 3.1:+65716471 | MS.gene79866:CDS |
TCCCTTCTATTACCATTACG+GGG | 0.657757 | 3.1:-65715888 | None:intergenic |
CTCCGTGGCTGGTAGCTACG+TGG | 0.661238 | 3.1:+65716229 | MS.gene79866:CDS |
TCCACCAGTTAAGCCAGAGG+AGG | 0.663790 | 3.1:+65716908 | MS.gene79866:CDS |
GATATAGCTGACTATACACA+AGG | 0.671588 | 3.1:-65713744 | None:intergenic |
AATGTAAATTTCATCACCAG+CGG | 0.671664 | 3.1:-65716865 | None:intergenic |
CTTGAAGGGTCCATCCAGTG+TGG | 0.694549 | 3.1:-65710852 | None:intergenic |
TTACCCTAGCAGAATCGCGG+TGG | 0.701240 | 3.1:+65715543 | MS.gene79866:CDS |
GAGTTACCCTAGCAGAATCG+CGG | 0.703295 | 3.1:+65715540 | MS.gene79866:CDS |
GCTGATCATATGATTGACAG+TGG | 0.709409 | 3.1:-65715599 | None:intergenic |
CTTCGGTCATGGGATCCTAG+AGG | 0.710224 | 3.1:+65716711 | MS.gene79866:CDS |
CTTCCCCAATAATCCCATCG+TGG | 0.724946 | 3.1:-65715748 | None:intergenic |
GACTTGTAAGTGCTGTACCA+AGG | 0.729494 | 3.1:-65716258 | None:intergenic |
AACTACACATTGGATCCCTG+CGG | 0.737988 | 3.1:+65716481 | MS.gene79866:CDS |
ACACTATATCAATATCAATG+CGG | 0.747009 | 3.1:+65715451 | MS.gene79866:CDS |
ATATAGCTGACTATACACAA+GGG | 0.747493 | 3.1:-65713743 | None:intergenic |
TTGACAGGGAAGTAACTCCG+TGG | 0.756383 | 3.1:+65716214 | MS.gene79866:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTTGCATATTAAAAAAA+TGG | + | chr3.1:65713392-65713411 | MS.gene79866:intron | 10.0% |
!! | TAAAGAAAAAAATAATACTT+TGG | - | chr3.1:65712585-65712604 | None:intergenic | 10.0% |
!!! | CAAATTATATATCATTTTTA+TGG | - | chr3.1:65715080-65715099 | None:intergenic | 10.0% |
!!! | GGAAAAAAAATTAAAATTTT+AGG | + | chr3.1:65715304-65715323 | MS.gene79866:intron | 10.0% |
!!! | TTATTTTAGTTAACATTAAT+TGG | - | chr3.1:65713151-65713170 | None:intergenic | 10.0% |
!! | AAAATATTTAATGAAATTGG+TGG | - | chr3.1:65712385-65712404 | None:intergenic | 15.0% |
!! | AAATATTTAATGAAATTGGT+GGG | - | chr3.1:65712384-65712403 | None:intergenic | 15.0% |
!! | AAATTATCCTAATTAACTAT+TGG | - | chr3.1:65712620-65712639 | None:intergenic | 15.0% |
!! | AATAGTTAATTAGGATAATT+TGG | + | chr3.1:65712619-65712638 | MS.gene79866:intron | 15.0% |
!! | ACCAAATATGTTAAATAAAT+AGG | - | chr3.1:65713575-65713594 | None:intergenic | 15.0% |
!! | ATCTATGTAATATTAAATAG+AGG | + | chr3.1:65711595-65711614 | MS.gene79866:intron | 15.0% |
!! | CTGAATAATTTCTAATAAAT+AGG | + | chr3.1:65711763-65711782 | MS.gene79866:intron | 15.0% |
!! | GAAGATTTACTATATAAATA+TGG | + | chr3.1:65716318-65716337 | MS.gene79866:CDS | 15.0% |
!! | GTAACATAATATTAATTGAA+GGG | - | chr3.1:65712555-65712574 | None:intergenic | 15.0% |
!! | GTGAATGATTTATTATAAAT+AGG | - | chr3.1:65711731-65711750 | None:intergenic | 15.0% |
!! | TAACATTAATTGGAAAATAT+TGG | - | chr3.1:65713141-65713160 | None:intergenic | 15.0% |
!! | TAATTTCTAATAAATAGGAT+CGG | + | chr3.1:65711768-65711787 | MS.gene79866:intron | 15.0% |
!! | TCTTGATTATTTATTTATTC+AGG | + | chr3.1:65715839-65715858 | MS.gene79866:intron | 15.0% |
!! | TGTAACATAATATTAATTGA+AGG | - | chr3.1:65712556-65712575 | None:intergenic | 15.0% |
!!! | ATTGATTCTTCATTTTTTAA+AGG | + | chr3.1:65714867-65714886 | MS.gene79866:intron | 15.0% |
!!! | TAAACTAGTTTATCAATTAT+CGG | - | chr3.1:65711236-65711255 | None:intergenic | 15.0% |
!!! | TAAGTCATAAATTTAAAATC+TGG | + | chr3.1:65711519-65711538 | MS.gene79866:intron | 15.0% |
!!! | TTTTGATGTCTTTAAAAAAA+TGG | + | chr3.1:65714724-65714743 | MS.gene79866:intron | 15.0% |
!!! | TTTTTCAAATAAGATAACAT+AGG | + | chr3.1:65711422-65711441 | MS.gene79866:intron | 15.0% |
!! | AAACAAACCAATAGTTAATT+AGG | + | chr3.1:65712610-65712629 | MS.gene79866:intron | 20.0% |
!! | AAACAAACTTCAAAATTACT+TGG | - | chr3.1:65712903-65712922 | None:intergenic | 20.0% |
!! | AACAAACTTCAAAATTACTT+GGG | - | chr3.1:65712902-65712921 | None:intergenic | 20.0% |
!! | AATAAAACTAATCTTCCTTT+CGG | + | chr3.1:65711704-65711723 | MS.gene79866:intron | 20.0% |
!! | ACATATTAAGTGATAAACTA+TGG | - | chr3.1:65715124-65715143 | None:intergenic | 20.0% |
!! | AGACATTCGAATAATTAAAA+AGG | - | chr3.1:65714603-65714622 | None:intergenic | 20.0% |
!! | ATACTAAAAGTGAATCAATA+AGG | - | chr3.1:65716134-65716153 | None:intergenic | 20.0% |
!! | ATTGTTGAATTATATTTGCA+GGG | + | chr3.1:65713611-65713630 | MS.gene79866:intron | 20.0% |
!! | GCCTATTTATTTAACATATT+TGG | + | chr3.1:65713571-65713590 | MS.gene79866:intron | 20.0% |
!! | TATTTATTTATTCAGGTACA+TGG | + | chr3.1:65715846-65715865 | MS.gene79866:intron | 20.0% |
!! | TTAATGAAGAAGAAAATTAG+TGG | - | chr3.1:65711057-65711076 | None:intergenic | 20.0% |
!! | TTATATTATTCTTTCAATGC+TGG | + | chr3.1:65716006-65716025 | MS.gene79866:CDS | 20.0% |
!!! | AAAAATTTGTTTCACAATGA+AGG | + | chr3.1:65712483-65712502 | MS.gene79866:intron | 20.0% |
!!! | AACATTGTTTCTTCATTTTT+AGG | + | chr3.1:65716973-65716992 | MS.gene79866:intron | 20.0% |
!!! | ACATTGTTTCTTCATTTTTA+GGG | + | chr3.1:65716974-65716993 | MS.gene79866:intron | 20.0% |
!!! | CATTGTGAAACAAATTTTTT+TGG | - | chr3.1:65712482-65712501 | None:intergenic | 20.0% |
!!! | CTAATTTTTAATGAATGTTC+AGG | - | chr3.1:65714205-65714224 | None:intergenic | 20.0% |
!!! | TACTATCATTTTTCTTTTCT+TGG | + | chr3.1:65711123-65711142 | MS.gene79866:intron | 20.0% |
!!! | TACTGATGTGTTTTTTTTTT+TGG | + | chr3.1:65713184-65713203 | MS.gene79866:intron | 20.0% |
!!! | TATCAAATAAGTCTTTTTTG+TGG | + | chr3.1:65711480-65711499 | MS.gene79866:intron | 20.0% |
!!! | TCAAGTATATTATATGGTTT+TGG | - | chr3.1:65714794-65714813 | None:intergenic | 20.0% |
!!! | TTTTTGAAATTTTTCCGTAT+CGG | + | chr3.1:65713484-65713503 | MS.gene79866:intron | 20.0% |
! | AAAGTGACATTAATTGCATT+TGG | - | chr3.1:65712186-65712205 | None:intergenic | 25.0% |
! | AATTTATCTGGTGTAGTTAA+TGG | - | chr3.1:65716592-65716611 | None:intergenic | 25.0% |
! | ACAAACTTCAAAATTACTTG+GGG | - | chr3.1:65712901-65712920 | None:intergenic | 25.0% |
! | ACACTATATCAATATCAATG+CGG | + | chr3.1:65715451-65715470 | MS.gene79866:CDS | 25.0% |
! | AGGAGTAAATTATAAAAGTC+AGG | + | chr3.1:65715324-65715343 | MS.gene79866:intron | 25.0% |
! | ATAACTTATAAACTAACTCG+TGG | + | chr3.1:65711285-65711304 | MS.gene79866:intron | 25.0% |
! | ATATGCTACTCTTAGAATAA+AGG | + | chr3.1:65712078-65712097 | MS.gene79866:intron | 25.0% |
! | CATTGTTGAATTATATTTGC+AGG | + | chr3.1:65713610-65713629 | MS.gene79866:intron | 25.0% |
! | CTTACATATATCTTACTAAG+TGG | + | chr3.1:65716765-65716784 | MS.gene79866:intron | 25.0% |
! | GAGTAAATTATAAAAGTCAG+GGG | + | chr3.1:65715326-65715345 | MS.gene79866:intron | 25.0% |
! | GAGTATTAGATATGAGATTA+AGG | + | chr3.1:65712728-65712747 | MS.gene79866:intron | 25.0% |
! | GGAGTAAATTATAAAAGTCA+GGG | + | chr3.1:65715325-65715344 | MS.gene79866:intron | 25.0% |
! | GTGATGAAATTTACATTGTT+AGG | + | chr3.1:65716871-65716890 | MS.gene79866:CDS | 25.0% |
! | TATGCTACTCTTAGAATAAA+GGG | + | chr3.1:65712079-65712098 | MS.gene79866:intron | 25.0% |
! | TCAAAAATCAAGATACGATA+CGG | - | chr3.1:65713471-65713490 | None:intergenic | 25.0% |
! | TCTGCATCAAGTATATTATA+TGG | - | chr3.1:65714800-65714819 | None:intergenic | 25.0% |
! | TGATATTGATATAGTGTGTT+GGG | - | chr3.1:65715448-65715467 | None:intergenic | 25.0% |
! | TTATTATAAATAGGACCGAA+AGG | - | chr3.1:65711722-65711741 | None:intergenic | 25.0% |
! | TTCAAAAATAACATATGCAG+TGG | - | chr3.1:65715387-65715406 | None:intergenic | 25.0% |
! | TTGATATTGATATAGTGTGT+TGG | - | chr3.1:65715449-65715468 | None:intergenic | 25.0% |
! | TTGTTGAATTATATTTGCAG+GGG | + | chr3.1:65713612-65713631 | MS.gene79866:intron | 25.0% |
! | TTTCACATTAGATAACTACA+TGG | + | chr3.1:65714179-65714198 | MS.gene79866:intron | 25.0% |
!! | ACACAACTCAAAATTTTAAG+AGG | + | chr3.1:65714225-65714244 | MS.gene79866:intron | 25.0% |
!! | ACTAATTTCTTCTTTTCAGT+AGG | - | chr3.1:65712426-65712445 | None:intergenic | 25.0% |
!! | AGAAAACTATGACTTTTTGA+TGG | + | chr3.1:65712835-65712854 | MS.gene79866:intron | 25.0% |
!! | ATTAATTGAAGGGTACAATT+GGG | - | chr3.1:65712545-65712564 | None:intergenic | 25.0% |
!! | GACAAGAATTTTACATTTTG+AGG | + | chr3.1:65712334-65712353 | MS.gene79866:intron | 25.0% |
!! | GGAATACATTTTATAATGCT+CGG | + | chr3.1:65716030-65716049 | MS.gene79866:CDS | 25.0% |
!! | TATTAATTGAAGGGTACAAT+TGG | - | chr3.1:65712546-65712565 | None:intergenic | 25.0% |
!!! | AACTCAAAATTTTAAGAGGA+AGG | + | chr3.1:65714229-65714248 | MS.gene79866:intron | 25.0% |
!!! | AATTTTGACTTGAGATTTCT+TGG | + | chr3.1:65715792-65715811 | MS.gene79866:intron | 25.0% |
!!! | AGTGCTTTGAAATAAAAAGA+AGG | + | chr3.1:65711080-65711099 | MS.gene79866:intron | 25.0% |
!!! | CACAATTTTATTGATTGATC+AGG | - | chr3.1:65714579-65714598 | None:intergenic | 25.0% |
!!! | TATATTATATGGTTTTGGCA+GGG | - | chr3.1:65714789-65714808 | None:intergenic | 25.0% |
AAAAATAACATATGCAGTGG+CGG | - | chr3.1:65715384-65715403 | None:intergenic | 30.0% | |
AAACAAAAGAAACCACTCAT+AGG | - | chr3.1:65713366-65713385 | None:intergenic | 30.0% | |
AAACTCATGCATTATGGATT+TGG | + | chr3.1:65716817-65716836 | MS.gene79866:CDS | 30.0% | |
AAGCCTCTCATAAATTTATC+TGG | - | chr3.1:65716604-65716623 | None:intergenic | 30.0% | |
AAGGCATGAGTCAATATATT+TGG | - | chr3.1:65713891-65713910 | None:intergenic | 30.0% | |
AATGTAAATTTCATCACCAG+CGG | - | chr3.1:65716868-65716887 | None:intergenic | 30.0% | |
ACACCAGATAAATTTATGAG+AGG | + | chr3.1:65716598-65716617 | MS.gene79866:CDS | 30.0% | |
ACACTTCAGAGATTTAGTTA+TGG | + | chr3.1:65714137-65714156 | MS.gene79866:intron | 30.0% | |
AGAAATCCAAATAGAGTCAT+AGG | - | chr3.1:65711005-65711024 | None:intergenic | 30.0% | |
AGAAGAAAATTAGTGGAAGA+AGG | - | chr3.1:65711050-65711069 | None:intergenic | 30.0% | |
AGAATGAAACTCATGCATTA+TGG | + | chr3.1:65716811-65716830 | MS.gene79866:CDS | 30.0% | |
AGGTACATAAAACATGAATC+TGG | + | chr3.1:65716928-65716947 | MS.gene79866:intron | 30.0% | |
ATAACCCATAGCTACTAATT+TGG | - | chr3.1:65713947-65713966 | None:intergenic | 30.0% | |
ATAATTGTGTAGACTAGAGA+AGG | - | chr3.1:65716745-65716764 | None:intergenic | 30.0% | |
ATAGTTCAATATGGAAGGTT+TGG | + | chr3.1:65713688-65713707 | MS.gene79866:CDS | 30.0% | |
ATATAGCTGACTATACACAA+GGG | - | chr3.1:65713746-65713765 | None:intergenic | 30.0% | |
ATCAGGACACAAAAAATCTT+AGG | - | chr3.1:65714562-65714581 | None:intergenic | 30.0% | |
ATCCCCTGCAATAAAAAAAA+GGG | - | chr3.1:65716160-65716179 | None:intergenic | 30.0% | |
ATGACTCTATTTGGATTTCT+TGG | + | chr3.1:65711005-65711024 | MS.gene79866:CDS | 30.0% | |
ATGTATCTTACTAATGGTAC+TGG | + | chr3.1:65715670-65715689 | MS.gene79866:CDS | 30.0% | |
ATTCCCTTCTATTACCATTA+CGG | - | chr3.1:65715893-65715912 | None:intergenic | 30.0% | |
ATTTGGATTTCTTGGATTAC+AGG | + | chr3.1:65711013-65711032 | MS.gene79866:CDS | 30.0% | |
CAAACTTCAAAATTACTTGG+GGG | - | chr3.1:65712900-65712919 | None:intergenic | 30.0% | |
CACTTCAGAGATTTAGTTAT+GGG | + | chr3.1:65714138-65714157 | MS.gene79866:intron | 30.0% | |
CCAATGTGTAGTTATATACA+CGG | - | chr3.1:65716474-65716493 | None:intergenic | 30.0% | |
GCTAACATGTATCTTACTAA+TGG | + | chr3.1:65715664-65715683 | MS.gene79866:CDS | 30.0% | |
GGTATATTAACACTTTGACT+TGG | + | chr3.1:65713823-65713842 | MS.gene79866:intron | 30.0% | |
TAATTGGAAAATATTGGAGC+AGG | - | chr3.1:65713135-65713154 | None:intergenic | 30.0% | |
TACATATCATACGACAAATC+AGG | + | chr3.1:65716057-65716076 | MS.gene79866:CDS | 30.0% | |
TAGAGTATATGAGATTGTAG+TGG | + | chr3.1:65711259-65711278 | MS.gene79866:intron | 30.0% | |
TATCGGTGCATGATAATTAT+CGG | - | chr3.1:65713112-65713131 | None:intergenic | 30.0% | |
TATTATTCTTTCAATGCTGG+AGG | + | chr3.1:65716009-65716028 | MS.gene79866:CDS | 30.0% | |
TCAATACAAATGGTTGGAAA+AGG | + | chr3.1:65716179-65716198 | MS.gene79866:CDS | 30.0% | |
TCATTATTTCAGAACAATGC+CGG | + | chr3.1:65715504-65715523 | MS.gene79866:CDS | 30.0% | |
TGTCATTGTCAATATGTGTT+TGG | + | chr3.1:65714103-65714122 | MS.gene79866:intron | 30.0% | |
TTCTAATAAATAGGATCGGA+GGG | + | chr3.1:65711772-65711791 | MS.gene79866:intron | 30.0% | |
TTCTTACGAGAAAATTGAAC+AGG | + | chr3.1:65716426-65716445 | MS.gene79866:intron | 30.0% | |
TTTAGCATTGTGTCTGTTAT+AGG | - | chr3.1:65714476-65714495 | None:intergenic | 30.0% | |
TTTCTAATAAATAGGATCGG+AGG | + | chr3.1:65711771-65711790 | MS.gene79866:intron | 30.0% | |
TTTCTTGTGACAATTGTCAT+CGG | - | chr3.1:65712820-65712839 | None:intergenic | 30.0% | |
! | TGACGAATTTTGTCAATAGT+GGG | - | chr3.1:65712292-65712311 | None:intergenic | 30.0% |
! | TGATTTGTCGTATGATATGT+AGG | - | chr3.1:65716058-65716077 | None:intergenic | 30.0% |
! | TTATGTAACACCGACATTTT+GGG | + | chr3.1:65713963-65713982 | MS.gene79866:intron | 30.0% |
!! | AAGTGACACTCATTTTGAAA+CGG | - | chr3.1:65712456-65712475 | None:intergenic | 30.0% |
!! | ACTTTAAAATCGACACTCAA+AGG | + | chr3.1:65712039-65712058 | MS.gene79866:intron | 30.0% |
!! | GGAGTAATAATTTGTTACCA+TGG | + | chr3.1:65712100-65712119 | MS.gene79866:intron | 30.0% |
!! | TCATTTTTCTTTTCTTGGTG+CGG | + | chr3.1:65711128-65711147 | MS.gene79866:intron | 30.0% |
!! | TCTGTTATAGGTGTTAGTTT+TGG | - | chr3.1:65714464-65714483 | None:intergenic | 30.0% |
!!! | ATCCCTTTTTTTTATTGCAG+GGG | + | chr3.1:65716155-65716174 | MS.gene79866:intron | 30.0% |
!!! | CATCCCTTTTTTTTATTGCA+GGG | + | chr3.1:65716154-65716173 | MS.gene79866:intron | 30.0% |
!!! | GTATATTATATGGTTTTGGC+AGG | - | chr3.1:65714790-65714809 | None:intergenic | 30.0% |
!!! | TCATCCCTTTTTTTTATTGC+AGG | + | chr3.1:65716153-65716172 | MS.gene79866:intron | 30.0% |
!!! | TGGATATAGTGCTTCTTTTT+TGG | + | chr3.1:65713204-65713223 | MS.gene79866:intron | 30.0% |
AAATCGACACTCAAAGGAAA+AGG | + | chr3.1:65712045-65712064 | MS.gene79866:intron | 35.0% | |
AATCCAAATAGAGTCATAGG+AGG | - | chr3.1:65711002-65711021 | None:intergenic | 35.0% | |
AGAGACAGTGTAACAATATG+AGG | - | chr3.1:65710785-65710804 | None:intergenic | 35.0% | |
AGCAACAGGTAAATTCTGTT+GGG | + | chr3.1:65716651-65716670 | MS.gene79866:CDS | 35.0% | |
AGGTGCAAAGTAAAAAAGTC+AGG | + | chr3.1:65715270-65715289 | MS.gene79866:intron | 35.0% | |
ATGAAACATATCAACCACGA+TGG | + | chr3.1:65715734-65715753 | MS.gene79866:CDS | 35.0% | |
ATGGCCAAATTAGTAGCTAT+GGG | + | chr3.1:65713940-65713959 | MS.gene79866:intron | 35.0% | |
ATTCTATACTCTCTAGGTGT+TGG | + | chr3.1:65712251-65712270 | MS.gene79866:intron | 35.0% | |
CAAATGGTTGGAAAAGGATT+TGG | + | chr3.1:65716185-65716204 | MS.gene79866:CDS | 35.0% | |
CAAGTCACATTATAGAGAAG+CGG | + | chr3.1:65716275-65716294 | MS.gene79866:CDS | 35.0% | |
CACGACTAAATTCACATGTA+AGG | - | chr3.1:65714842-65714861 | None:intergenic | 35.0% | |
CCAACTGTTTCAGGATTTAA+CGG | - | chr3.1:65713664-65713683 | None:intergenic | 35.0% | |
CCGAATAGAAGAATTGATAG+CGG | + | chr3.1:65712214-65712233 | MS.gene79866:intron | 35.0% | |
CCGCTATCAATTCTTCTATT+CGG | - | chr3.1:65712217-65712236 | None:intergenic | 35.0% | |
CCGTGTATATAACTACACAT+TGG | + | chr3.1:65716471-65716490 | MS.gene79866:CDS | 35.0% | |
CTAAGTTCAATCCTTGTTCA+TGG | + | chr3.1:65710818-65710837 | MS.gene79866:CDS | 35.0% | |
CTTGTTCAAAGAAACGTTGA+AGG | + | chr3.1:65710941-65710960 | MS.gene79866:CDS | 35.0% | |
GAAAATATTGGAGCAGGTAT+CGG | - | chr3.1:65713129-65713148 | None:intergenic | 35.0% | |
GACACAATGCTAAATGTTTG+CGG | + | chr3.1:65714518-65714537 | MS.gene79866:intron | 35.0% | |
GAGAAGGAAATATTACCTCT+AGG | - | chr3.1:65716729-65716748 | None:intergenic | 35.0% | |
GATATAGCTGACTATACACA+AGG | - | chr3.1:65713747-65713766 | None:intergenic | 35.0% | |
GATCCCCTGCAATAAAAAAA+AGG | - | chr3.1:65716161-65716180 | None:intergenic | 35.0% | |
GCCACAATAGGTGATATATT+AGG | + | chr3.1:65711200-65711219 | MS.gene79866:intron | 35.0% | |
GCCTAATATATCACCTATTG+TGG | - | chr3.1:65711204-65711223 | None:intergenic | 35.0% | |
GGAAGGAAACAAGATTGAAA+AGG | + | chr3.1:65714246-65714265 | MS.gene79866:intron | 35.0% | |
GTAGCATAGTTCAATATGGA+AGG | + | chr3.1:65713683-65713702 | MS.gene79866:CDS | 35.0% | |
GTTCTATATTGTCCCCAATT+TGG | - | chr3.1:65713642-65713661 | None:intergenic | 35.0% | |
TATGGCCAAATTAGTAGCTA+TGG | + | chr3.1:65713939-65713958 | MS.gene79866:intron | 35.0% | |
TCAACGTTTCTTTGAACAAG+AGG | - | chr3.1:65710941-65710960 | None:intergenic | 35.0% | |
TCACCAACTGTGATATAAAC+AGG | - | chr3.1:65716508-65716527 | None:intergenic | 35.0% | |
TCATCCTGATCTTATTCTGT+TGG | + | chr3.1:65715624-65715643 | MS.gene79866:CDS | 35.0% | |
TGAAACATATCAACCACGAT+GGG | + | chr3.1:65715735-65715754 | MS.gene79866:CDS | 35.0% | |
TGACTCATTCTATACTCTCT+AGG | + | chr3.1:65712245-65712264 | MS.gene79866:intron | 35.0% | |
TGACTTGACTTAGAATGACT+AGG | - | chr3.1:65714300-65714319 | None:intergenic | 35.0% | |
TGCAAAGTAAAAAAGTCAGG+AGG | + | chr3.1:65715273-65715292 | MS.gene79866:intron | 35.0% | |
TTCAATATGGAAGGTTTGGA+AGG | + | chr3.1:65713692-65713711 | MS.gene79866:CDS | 35.0% | |
TTCCCTTCTATTACCATTAC+GGG | - | chr3.1:65715892-65715911 | None:intergenic | 35.0% | |
TTCCTTAATCTGTGTGCAAT+TGG | + | chr3.1:65712676-65712695 | MS.gene79866:intron | 35.0% | |
! | AAACCTTTTGAGCCTATTGT+GGG | - | chr3.1:65712872-65712891 | None:intergenic | 35.0% |
! | AGTCAGCTATATCCTTTTCA+AGG | + | chr3.1:65713754-65713773 | MS.gene79866:CDS | 35.0% |
! | ATCGTGGTTGATATGTTTCA+TGG | - | chr3.1:65715735-65715754 | None:intergenic | 35.0% |
! | CAGATATAGTATAGCACTGA+TGG | + | chr3.1:65713248-65713267 | MS.gene79866:intron | 35.0% |
! | CTGACGAATTTTGTCAATAG+TGG | - | chr3.1:65712293-65712312 | None:intergenic | 35.0% |
! | CTTGGTTCATCATTTTCTTC+TGG | + | chr3.1:65716086-65716105 | MS.gene79866:intron | 35.0% |
! | GGTTGATATGTTTCATGGAT+GGG | - | chr3.1:65715730-65715749 | None:intergenic | 35.0% |
! | GTTATGTAACACCGACATTT+TGG | + | chr3.1:65713962-65713981 | MS.gene79866:intron | 35.0% |
! | TAAACCTTTTGAGCCTATTG+TGG | - | chr3.1:65712873-65712892 | None:intergenic | 35.0% |
! | TGGTTGATATGTTTCATGGA+TGG | - | chr3.1:65715731-65715750 | None:intergenic | 35.0% |
! | TGTACCTTTTTGACACTTCT+TGG | - | chr3.1:65715168-65715187 | None:intergenic | 35.0% |
! | TTCACAATGAAGGTCACTTT+CGG | + | chr3.1:65712493-65712512 | MS.gene79866:intron | 35.0% |
!! | GGTGTTGACATTGTCTTTAA+CGG | + | chr3.1:65716339-65716358 | MS.gene79866:CDS | 35.0% |
!! | GTTGGTAGCATAGTTCAATA+TGG | + | chr3.1:65713679-65713698 | MS.gene79866:CDS | 35.0% |
!! | GTTTATATCACAGTTGGTGA+CGG | + | chr3.1:65716508-65716527 | MS.gene79866:CDS | 35.0% |
!! | TAGTTCTGAAGTCCTTGAAA+AGG | - | chr3.1:65713769-65713788 | None:intergenic | 35.0% |
!! | TGAACCAAGAAGTGTCAAAA+AGG | + | chr3.1:65715161-65715180 | MS.gene79866:intron | 35.0% |
!! | TGGTAGAGTAATTAACTTGC+AGG | + | chr3.1:65716785-65716804 | MS.gene79866:intron | 35.0% |
!! | TTAACACTTTGACTTGGTAC+AGG | + | chr3.1:65713829-65713848 | MS.gene79866:intron | 35.0% |
!! | TTAGGATCGACCTTAGTTTT+TGG | - | chr3.1:65714544-65714563 | None:intergenic | 35.0% |
!!! | CGTCATCCATTTTGAAGTAT+CGG | - | chr3.1:65712948-65712967 | None:intergenic | 35.0% |
!!! | GACACTCATTTTGAAACAGA+TGG | + | chr3.1:65712706-65712725 | MS.gene79866:intron | 35.0% |
!!! | GTCATCCATTTTGAAGTATC+GGG | - | chr3.1:65712947-65712966 | None:intergenic | 35.0% |
!!! | TCATCCATTTTGAAGTATCG+GGG | - | chr3.1:65712946-65712965 | None:intergenic | 35.0% |
AAATCAAGATACGATACGGC+TGG | - | chr3.1:65713467-65713486 | None:intergenic | 40.0% | |
AACCGCAATCAAGACTTGTA+TGG | + | chr3.1:65716840-65716859 | MS.gene79866:CDS | 40.0% | |
AAGCACTATAATCAGGCTGT+TGG | - | chr3.1:65716678-65716697 | None:intergenic | 40.0% | |
AATCAAGATACGATACGGCT+GGG | - | chr3.1:65713466-65713485 | None:intergenic | 40.0% | |
AATTAGTGGAAGAAGGTGAG+TGG | - | chr3.1:65711043-65711062 | None:intergenic | 40.0% | |
ACCAAGGACTAACACATGTT+GGG | - | chr3.1:65714004-65714023 | None:intergenic | 40.0% | |
ACCGCAATCAAGACTTGTAT+GGG | + | chr3.1:65716841-65716860 | MS.gene79866:CDS | 40.0% | |
ACGCCTTTAACCCAAAATGT+CGG | - | chr3.1:65713976-65713995 | None:intergenic | 40.0% | |
ACTATGCTACCAACTGTTTC+AGG | - | chr3.1:65713673-65713692 | None:intergenic | 40.0% | |
AGCCAATTGCACACAGATTA+AGG | - | chr3.1:65712681-65712700 | None:intergenic | 40.0% | |
AGGGGATCAATACAAATGGT+TGG | + | chr3.1:65716173-65716192 | MS.gene79866:intron | 40.0% | |
AGGTTTGGAAGGTCAATGAA+TGG | + | chr3.1:65713703-65713722 | MS.gene79866:CDS | 40.0% | |
AGTTCAATCCTTGTTCATGG+TGG | + | chr3.1:65710821-65710840 | MS.gene79866:CDS | 40.0% | |
ATACATCATGTTCGTCTCAC+AGG | + | chr3.1:65713802-65713821 | MS.gene79866:CDS | 40.0% | |
ATACTCTCCTGATACGTATC+GGG | - | chr3.1:65713016-65713035 | None:intergenic | 40.0% | |
ATCAACCACGATGGGATTAT+TGG | + | chr3.1:65715743-65715762 | MS.gene79866:CDS | 40.0% | |
ATGTTTGCGGCCAAAAACTA+AGG | + | chr3.1:65714531-65714550 | MS.gene79866:intron | 40.0% | |
ATTACTCATGCAGATGAACC+AGG | + | chr3.1:65716553-65716572 | MS.gene79866:CDS | 40.0% | |
ATTAGTGGAAGAAGGTGAGT+GGG | - | chr3.1:65711042-65711061 | None:intergenic | 40.0% | |
ATTCTGCTAGGGTAACTCTT+GGG | - | chr3.1:65715538-65715557 | None:intergenic | 40.0% | |
CAACAGAATTTACCTGTTGC+TGG | - | chr3.1:65716652-65716671 | None:intergenic | 40.0% | |
CAGCAACAGGTAAATTCTGT+TGG | + | chr3.1:65716650-65716669 | MS.gene79866:CDS | 40.0% | |
CCAACCAACAGAATAAGATC+AGG | - | chr3.1:65715631-65715650 | None:intergenic | 40.0% | |
CCGTTAAATCCTGAAACAGT+TGG | + | chr3.1:65713661-65713680 | MS.gene79866:CDS | 40.0% | |
CCTGATCTTATTCTGTTGGT+TGG | + | chr3.1:65715628-65715647 | MS.gene79866:CDS | 40.0% | |
CGACAAATCAGGTTAACTCT+TGG | + | chr3.1:65716068-65716087 | MS.gene79866:intron | 40.0% | |
CTCTTAACGCTTCTCTTTCA+AGG | - | chr3.1:65713910-65713929 | None:intergenic | 40.0% | |
CTTCAAAATTACTTGGGGGT+AGG | - | chr3.1:65712896-65712915 | None:intergenic | 40.0% | |
GACACTCAAAGGAAAAGGAA+AGG | + | chr3.1:65712050-65712069 | MS.gene79866:intron | 40.0% | |
GACTTAGAATGACTAGGCAA+TGG | - | chr3.1:65714294-65714313 | None:intergenic | 40.0% | |
GATACTCTCCTGATACGTAT+CGG | - | chr3.1:65713017-65713036 | None:intergenic | 40.0% | |
GCTGATCATATGATTGACAG+TGG | - | chr3.1:65715602-65715621 | None:intergenic | 40.0% | |
GGACTTCAGAACTATACTTC+TGG | + | chr3.1:65713775-65713794 | MS.gene79866:CDS | 40.0% | |
GGTCCTGTTTATATCACAGT+TGG | + | chr3.1:65716502-65716521 | MS.gene79866:CDS | 40.0% | |
GTTACCATGGTTGTTGACAT+TGG | + | chr3.1:65712113-65712132 | MS.gene79866:intron | 40.0% | |
TACACGGTTTGATCTCTCAT+AGG | - | chr3.1:65716458-65716477 | None:intergenic | 40.0% | |
TACTCTCCTCTGATACGTAT+CGG | - | chr3.1:65713088-65713107 | None:intergenic | 40.0% | |
TCAACCACGATGGGATTATT+GGG | + | chr3.1:65715744-65715763 | MS.gene79866:CDS | 40.0% | |
TCACTCATTGCTGACAAAGA+AGG | - | chr3.1:65715481-65715500 | None:intergenic | 40.0% | |
TCCCATACAAGTCTTGATTG+CGG | - | chr3.1:65716845-65716864 | None:intergenic | 40.0% | |
TCCCCGTAATGGTAATAGAA+GGG | + | chr3.1:65715887-65715906 | MS.gene79866:CDS | 40.0% | |
TCCCTTCTATTACCATTACG+GGG | - | chr3.1:65715891-65715910 | None:intergenic | 40.0% | |
TCTGGTGTAGTTAATGGTTC+AGG | - | chr3.1:65716586-65716605 | None:intergenic | 40.0% | |
TGGACCGGAAGAAAAATTGA+AGG | - | chr3.1:65716632-65716651 | None:intergenic | 40.0% | |
TTAGAACTCCACCATGAACA+AGG | - | chr3.1:65710832-65710851 | None:intergenic | 40.0% | |
TTGCAGGGGAATTCCAAATT+GGG | + | chr3.1:65713626-65713645 | MS.gene79866:intron | 40.0% | |
TTGCAGGGGATCAATACAAA+TGG | + | chr3.1:65716169-65716188 | MS.gene79866:intron | 40.0% | |
TTTGCAGGGGAATTCCAAAT+TGG | + | chr3.1:65713625-65713644 | MS.gene79866:intron | 40.0% | |
! | AGTGAGAGAGAGATTTGTTC+AGG | - | chr3.1:65710974-65710993 | None:intergenic | 40.0% |
! | CATGTTTTATGTACCTCCTC+TGG | - | chr3.1:65716924-65716943 | None:intergenic | 40.0% |
! | GTAGAACTCTACTCTTTTGC+AGG | + | chr3.1:65715415-65715434 | MS.gene79866:intron | 40.0% |
! | TGATACGTATCGGGAAGTAT+CGG | - | chr3.1:65713007-65713026 | None:intergenic | 40.0% |
! | TGCGCCTTCAATTTTTCTTC+CGG | + | chr3.1:65716625-65716644 | MS.gene79866:CDS | 40.0% |
! | TTAACTGGTGGACACTTATC+AGG | - | chr3.1:65716900-65716919 | None:intergenic | 40.0% |
! | TTCTCGATTTGCATTTCCGT+CGG | + | chr3.1:65715960-65715979 | MS.gene79866:CDS | 40.0% |
!! | AAGAGAAGCGTTAAGAGTAC+TGG | + | chr3.1:65713913-65713932 | MS.gene79866:intron | 40.0% |
!! | ATTTTTCCGTATCGGCGTAT+CGG | + | chr3.1:65713492-65713511 | MS.gene79866:intron | 40.0% |
!! | CGTTAAGAGTACTGGTCATA+TGG | + | chr3.1:65713921-65713940 | MS.gene79866:intron | 40.0% |
!! | GCACTGATGGTGTTCTTTTT+GGG | + | chr3.1:65713261-65713280 | MS.gene79866:intron | 40.0% |
!! | TCGCGAAAAGCACTATAATC+AGG | - | chr3.1:65716685-65716704 | None:intergenic | 40.0% |
!!! | ACACCGACATTTTGGGTTAA+AGG | + | chr3.1:65713970-65713989 | MS.gene79866:intron | 40.0% |
!!! | AGCACTGATGGTGTTCTTTT+TGG | + | chr3.1:65713260-65713279 | MS.gene79866:intron | 40.0% |
!!! | GACACTCATTTTGAAACGGA+TGG | - | chr3.1:65712452-65712471 | None:intergenic | 40.0% |
AACTACACATTGGATCCCTG+CGG | + | chr3.1:65716481-65716500 | MS.gene79866:CDS | 45.0% | |
AATGGTTCAGGACAGTTTCC+TGG | - | chr3.1:65716574-65716593 | None:intergenic | 45.0% | |
ACGGGGACACTAGAAATCAA+TGG | - | chr3.1:65715874-65715893 | None:intergenic | 45.0% | |
ACTCTCCTCTGATACGTATC+GGG | - | chr3.1:65713087-65713106 | None:intergenic | 45.0% | |
ATAGAGAAGCGGAGTGTATG+AGG | + | chr3.1:65716286-65716305 | MS.gene79866:CDS | 45.0% | |
ATGTGCTACAAGCCTATGAG+TGG | + | chr3.1:65713351-65713370 | MS.gene79866:intron | 45.0% | |
CAACCACGATGGGATTATTG+GGG | + | chr3.1:65715745-65715764 | MS.gene79866:CDS | 45.0% | |
CACCAAGGACTAACACATGT+TGG | - | chr3.1:65714005-65714024 | None:intergenic | 45.0% | |
CATGCCAATGTCAACAACCA+TGG | - | chr3.1:65712120-65712139 | None:intergenic | 45.0% | |
CCTCGAATATGGGTTTGAGA+GGG | - | chr3.1:65712780-65712799 | None:intergenic | 45.0% | |
CTGCCTCCTATGACTCTATT+TGG | + | chr3.1:65710996-65711015 | MS.gene79866:CDS | 45.0% | |
GAAGCCCCGATACTTCAAAA+TGG | + | chr3.1:65712939-65712958 | MS.gene79866:intron | 45.0% | |
GAATTTACCTGTTGCTGGAC+CGG | - | chr3.1:65716647-65716666 | None:intergenic | 45.0% | |
GATACTTCCCGATACGTATC+AGG | + | chr3.1:65713006-65713025 | MS.gene79866:intron | 45.0% | |
GATTCTGCTAGGGTAACTCT+TGG | - | chr3.1:65715539-65715558 | None:intergenic | 45.0% | |
GATTTAGTTATGGGCGCGAA+AGG | + | chr3.1:65714147-65714166 | MS.gene79866:intron | 45.0% | |
GTATGTCCACAGCATTTCCA+CGG | - | chr3.1:65710907-65710926 | None:intergenic | 45.0% | |
GTCCCCGTAATGGTAATAGA+AGG | + | chr3.1:65715886-65715905 | MS.gene79866:CDS | 45.0% | |
GTGATATAAACAGGACCGCA+GGG | - | chr3.1:65716499-65716518 | None:intergenic | 45.0% | |
TACTTCCCGATACGTATCAG+AGG | + | chr3.1:65713008-65713027 | MS.gene79866:intron | 45.0% | |
TAGAGAAGCGGAGTGTATGA+GGG | + | chr3.1:65716287-65716306 | MS.gene79866:CDS | 45.0% | |
TCAATGAATGGCCAAGCTGT+GGG | + | chr3.1:65713715-65713734 | MS.gene79866:CDS | 45.0% | |
TCCGTATCGTATCTCGTATC+CGG | + | chr3.1:65713527-65713546 | MS.gene79866:intron | 45.0% | |
TCTCCCACAATAGGCTCAAA+AGG | + | chr3.1:65712866-65712885 | MS.gene79866:intron | 45.0% | |
TGAACAAGAGGATCTGTGTC+TGG | - | chr3.1:65710929-65710948 | None:intergenic | 45.0% | |
TGCAACTGAGTTGTGAGAGT+TGG | + | chr3.1:65715242-65715261 | MS.gene79866:intron | 45.0% | |
TGCAGGGGAATTCCAAATTG+GGG | + | chr3.1:65713627-65713646 | MS.gene79866:intron | 45.0% | |
TGCATCCTCTCAATGATACG+TGG | + | chr3.1:65715356-65715375 | MS.gene79866:intron | 45.0% | |
TGCTTATATGCTGTGAAGCC+CGG | - | chr3.1:65713549-65713568 | None:intergenic | 45.0% | |
TGTGATATAAACAGGACCGC+AGG | - | chr3.1:65716500-65716519 | None:intergenic | 45.0% | |
TTAGTGGAAGAAGGTGAGTG+GGG | - | chr3.1:65711041-65711060 | None:intergenic | 45.0% | |
TTCTGCTAGGGTAACTCTTG+GGG | - | chr3.1:65715537-65715556 | None:intergenic | 45.0% | |
! | AGGATTTGGCTTCTCTTGAC+AGG | + | chr3.1:65716199-65716218 | MS.gene79866:CDS | 45.0% |
! | GACTTGTAAGTGCTGTACCA+AGG | - | chr3.1:65716261-65716280 | None:intergenic | 45.0% |
! | GGATTTGGCTTCTCTTGACA+GGG | + | chr3.1:65716200-65716219 | MS.gene79866:CDS | 45.0% |
!! | CTTTTCTTGGTGCGGTTCAT+TGG | + | chr3.1:65711136-65711155 | MS.gene79866:intron | 45.0% |
!! | GATACGTATCGGGAAGTATC+GGG | - | chr3.1:65713006-65713025 | None:intergenic | 45.0% |
!! | GATTTCTAGTGTCCCCGTAA+TGG | + | chr3.1:65715876-65715895 | MS.gene79866:CDS | 45.0% |
!! | TATATCACAGTTGGTGACGG+TGG | + | chr3.1:65716511-65716530 | MS.gene79866:CDS | 45.0% |
!! | TTCAGAACAATGCCGGTTTC+AGG | + | chr3.1:65715511-65715530 | MS.gene79866:CDS | 45.0% |
!! | TTGTCAAGAGGTACTGTCAC+AGG | - | chr3.1:65710878-65710897 | None:intergenic | 45.0% |
!! | AAAAAAATATTTAATGAAAT+TGG | - | chr3.1:65712388-65712407 | None:intergenic | 5.0% |
!! | ATAAAATAAAATTTAATCTT+CGG | - | chr3.1:65713039-65713058 | None:intergenic | 5.0% |
!!! | AAATTATATATCATTTTTAT+GGG | - | chr3.1:65715079-65715098 | None:intergenic | 5.0% |
!!! | TAACATTTATTATTATTTTT+TGG | - | chr3.1:65711814-65711833 | None:intergenic | 5.0% |
AAGCTTCCGTGGAAATGCTG+TGG | + | chr3.1:65710898-65710917 | MS.gene79866:CDS | 50.0% | |
AAGTTTGAACCCTCTGACCC+TGG | - | chr3.1:65714361-65714380 | None:intergenic | 50.0% | |
AGGGTCACCCTAAGTATGGT+TGG | - | chr3.1:65714770-65714789 | None:intergenic | 50.0% | |
AGTTTGAACCCTCTGACCCT+GGG | - | chr3.1:65714360-65714379 | None:intergenic | 50.0% | |
CAAGGGAATAACCCACAGCT+TGG | - | chr3.1:65713729-65713748 | None:intergenic | 50.0% | |
CACGATGGGATTATTGGGGA+AGG | + | chr3.1:65715749-65715768 | MS.gene79866:CDS | 50.0% | |
CATTTCCGTCGGAAGAGAGT+GGG | + | chr3.1:65715971-65715990 | MS.gene79866:CDS | 50.0% | |
CCCGGATACGAGATACGATA+CGG | - | chr3.1:65713531-65713550 | None:intergenic | 50.0% | |
CCCTCTCAAACCCATATTCG+AGG | + | chr3.1:65712777-65712796 | MS.gene79866:intron | 50.0% | |
CCGTATCGTATCTCGTATCC+GGG | + | chr3.1:65713528-65713547 | MS.gene79866:intron | 50.0% | |
CCTAAGTATGGTTGGGAGAG+CGG | - | chr3.1:65714762-65714781 | None:intergenic | 50.0% | |
CCTCTTGACAAAAGCTTCCG+TGG | + | chr3.1:65710887-65710906 | MS.gene79866:CDS | 50.0% | |
CGCTCTCCCAACCATACTTA+GGG | + | chr3.1:65714760-65714779 | MS.gene79866:intron | 50.0% | |
CGGTGGTAATCGGGAAAAGA+TGG | + | chr3.1:65716528-65716547 | MS.gene79866:CDS | 50.0% | |
CTTCCCCAATAATCCCATCG+TGG | - | chr3.1:65715751-65715770 | None:intergenic | 50.0% | |
GAGCATAGCTCTCCCACAAT+AGG | + | chr3.1:65712857-65712876 | MS.gene79866:intron | 50.0% | |
GAGTTACCCTAGCAGAATCG+CGG | + | chr3.1:65715540-65715559 | MS.gene79866:CDS | 50.0% | |
GCCCAACATGTGTTAGTCCT+TGG | + | chr3.1:65714000-65714019 | MS.gene79866:intron | 50.0% | |
GCCTCGAATATGGGTTTGAG+AGG | - | chr3.1:65712781-65712800 | None:intergenic | 50.0% | |
GCTGACAAGGCCTCGAATAT+GGG | - | chr3.1:65712790-65712809 | None:intergenic | 50.0% | |
GGGTCACCCTAAGTATGGTT+GGG | - | chr3.1:65714769-65714788 | None:intergenic | 50.0% | |
GGTACTGTCACAGGCTTGAA+GGG | - | chr3.1:65710869-65710888 | None:intergenic | 50.0% | |
GTCAATGAATGGCCAAGCTG+TGG | + | chr3.1:65713714-65713733 | MS.gene79866:CDS | 50.0% | |
TAACTCTTGGGGCCTGAAAC+CGG | - | chr3.1:65715526-65715545 | None:intergenic | 50.0% | |
TCGGGGCTTCACAGCTTATA+TGG | - | chr3.1:65712929-65712948 | None:intergenic | 50.0% | |
TCTCTCACTGCTGCCACAAT+AGG | + | chr3.1:65711188-65711207 | MS.gene79866:intron | 50.0% | |
TTGACAGGGAAGTAACTCCG+TGG | + | chr3.1:65716214-65716233 | MS.gene79866:CDS | 50.0% | |
! | AAAAGTCAGGAGGTGCAGAG+TGG | + | chr3.1:65715283-65715302 | MS.gene79866:intron | 50.0% |
! | AGGTACTGTCACAGGCTTGA+AGG | - | chr3.1:65710870-65710889 | None:intergenic | 50.0% |
! | AGTTGTGAGAGTTGGTCAGG+AGG | + | chr3.1:65715250-65715269 | MS.gene79866:intron | 50.0% |
! | CCACGGAAGCTTTTGTCAAG+AGG | - | chr3.1:65710890-65710909 | None:intergenic | 50.0% |
! | CTGAGTTGTGAGAGTTGGTC+AGG | + | chr3.1:65715247-65715266 | MS.gene79866:intron | 50.0% |
! | GCTTTTCGCGAAAGCAGCTT+CGG | + | chr3.1:65716694-65716713 | MS.gene79866:CDS | 50.0% |
! | GGAGTTCTAACCACACTGGA+TGG | + | chr3.1:65710842-65710861 | MS.gene79866:CDS | 50.0% |
! | TGGTGGAGTTCTAACCACAC+TGG | + | chr3.1:65710838-65710857 | MS.gene79866:CDS | 50.0% |
! | TGTACCTCCTCTGGCTTAAC+TGG | - | chr3.1:65716915-65716934 | None:intergenic | 50.0% |
! | TTTTCTTCCGGTCCAGCAAC+AGG | + | chr3.1:65716637-65716656 | MS.gene79866:CDS | 50.0% |
!! | AGTTGGTGACGGTGGTAATC+GGG | + | chr3.1:65716519-65716538 | MS.gene79866:CDS | 50.0% |
!! | CAGTTGGTGACGGTGGTAAT+CGG | + | chr3.1:65716518-65716537 | MS.gene79866:CDS | 50.0% |
ATCGCGGTGGTTGGAGACTT+AGG | + | chr3.1:65715556-65715575 | MS.gene79866:CDS | 55.0% | |
CAACCACCGCGATTCTGCTA+GGG | - | chr3.1:65715549-65715568 | None:intergenic | 55.0% | |
CAAGACTTGTATGGGACCGC+TGG | + | chr3.1:65716849-65716868 | MS.gene79866:CDS | 55.0% | |
CAAGCGTGACATATGCCCAG+TGG | + | chr3.1:65714323-65714342 | MS.gene79866:intron | 55.0% | |
CCGCTCTCCCAACCATACTT+AGG | + | chr3.1:65714759-65714778 | MS.gene79866:intron | 55.0% | |
CGCTGACAAGGCCTCGAATA+TGG | - | chr3.1:65712791-65712810 | None:intergenic | 55.0% | |
CGGAGCCACGTATCATTGAG+AGG | - | chr3.1:65715364-65715383 | None:intergenic | 55.0% | |
CTTCGGTCATGGGATCCTAG+AGG | + | chr3.1:65716711-65716730 | MS.gene79866:CDS | 55.0% | |
CTTGAAGGGTCCATCCAGTG+TGG | - | chr3.1:65710855-65710874 | None:intergenic | 55.0% | |
GATGACCCACTCTCTTCCGA+CGG | - | chr3.1:65715979-65715998 | None:intergenic | 55.0% | |
GCATTTCCGTCGGAAGAGAG+TGG | + | chr3.1:65715970-65715989 | MS.gene79866:CDS | 55.0% | |
GCGAAAGCAGCTTCGGTCAT+GGG | + | chr3.1:65716701-65716720 | MS.gene79866:CDS | 55.0% | |
GGAGTGTATGAGGGTCGAGA+TGG | + | chr3.1:65716296-65716315 | MS.gene79866:CDS | 55.0% | |
GTGTCCACCAGTTAAGCCAG+AGG | + | chr3.1:65716905-65716924 | MS.gene79866:CDS | 55.0% | |
GTTCGACACTCGTACGACAG+TGG | + | chr3.1:65714024-65714043 | MS.gene79866:intron | 55.0% | |
TAGCTACGTGGCATGCACCT+TGG | + | chr3.1:65716241-65716260 | MS.gene79866:CDS | 55.0% | |
TCCACCAGTTAAGCCAGAGG+AGG | + | chr3.1:65716908-65716927 | MS.gene79866:CDS | 55.0% | |
TCGTACGACAGTGGCACATG+TGG | + | chr3.1:65714033-65714052 | MS.gene79866:intron | 55.0% | |
TGGCAGGGTCACCCTAAGTA+TGG | - | chr3.1:65714774-65714793 | None:intergenic | 55.0% | |
TTACCCTAGCAGAATCGCGG+TGG | + | chr3.1:65715543-65715562 | MS.gene79866:CDS | 55.0% | |
! | ACCTCCTCTGGCTTAACTGG+TGG | - | chr3.1:65716912-65716931 | None:intergenic | 55.0% |
! | ACTGCACCGATACGCCGATA+CGG | - | chr3.1:65713501-65713520 | None:intergenic | 55.0% |
!! | CGTACGAGTGTCGAACACCA+AGG | - | chr3.1:65714020-65714039 | None:intergenic | 55.0% |
!! | GGGAAGTATCGGGCAGGTAT+CGG | - | chr3.1:65712996-65713015 | None:intergenic | 55.0% |
AACCCTCTGACCCTGGGTCT+TGG | - | chr3.1:65714354-65714373 | None:intergenic | 60.0% | |
AGTGGCGTTGCCAAGACCCA+GGG | + | chr3.1:65714341-65714360 | MS.gene79866:intron | 60.0% | |
CAGGGAAGTAACTCCGTGGC+TGG | + | chr3.1:65716218-65716237 | MS.gene79866:CDS | 60.0% | |
CCAACCACCGCGATTCTGCT+AGG | - | chr3.1:65715550-65715569 | None:intergenic | 60.0% | |
CCTAGCAGAATCGCGGTGGT+TGG | + | chr3.1:65715547-65715566 | MS.gene79866:CDS | 60.0% | |
CGCGAAAGCAGCTTCGGTCA+TGG | + | chr3.1:65716700-65716719 | MS.gene79866:CDS | 60.0% | |
TGCCAAGACCCAGGGTCAGA+GGG | + | chr3.1:65714349-65714368 | MS.gene79866:intron | 60.0% | |
TGCCACGTAGCTACCAGCCA+CGG | - | chr3.1:65716234-65716253 | None:intergenic | 60.0% | |
TGGGTCTTGGCAACGCCACT+GGG | - | chr3.1:65714341-65714360 | None:intergenic | 60.0% | |
TTGCCAAGACCCAGGGTCAG+AGG | + | chr3.1:65714348-65714367 | MS.gene79866:intron | 60.0% | |
! | GTATCGGTGCGGGTTACGCA+GGG | - | chr3.1:65712980-65712999 | None:intergenic | 60.0% |
! | TATCGGTGCGGGTTACGCAG+GGG | - | chr3.1:65712979-65712998 | None:intergenic | 60.0% |
!! | CGTATCGGGAAGTATCGGGC+AGG | - | chr3.1:65713002-65713021 | None:intergenic | 60.0% |
!! | GTATCGGGCAGGTATCGGTG+CGG | - | chr3.1:65712991-65713010 | None:intergenic | 60.0% |
!! | TATCGGGCAGGTATCGGTGC+GGG | - | chr3.1:65712990-65713009 | None:intergenic | 60.0% |
CAGTGGCGTTGCCAAGACCC+AGG | + | chr3.1:65714340-65714359 | MS.gene79866:intron | 65.0% | |
CTCCGTGGCTGGTAGCTACG+TGG | + | chr3.1:65716229-65716248 | MS.gene79866:CDS | 65.0% | |
CTGGGTCTTGGCAACGCCAC+TGG | - | chr3.1:65714342-65714361 | None:intergenic | 65.0% | |
!! | CATCGGCTCGCTCGCTGACA+AGG | - | chr3.1:65712803-65712822 | None:intergenic | 65.0% |
!! | GGTATCGGTGCGGGTTACGC+AGG | - | chr3.1:65712981-65713000 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 65710761 | 65717000 | 65710761 | ID=MS.gene79866 |
chr3.1 | mRNA | 65710761 | 65717000 | 65710761 | ID=MS.gene79866.t1;Parent=MS.gene79866 |
chr3.1 | exon | 65710761 | 65711034 | 65710761 | ID=MS.gene79866.t1.exon1;Parent=MS.gene79866.t1 |
chr3.1 | CDS | 65710761 | 65711034 | 65710761 | ID=cds.MS.gene79866.t1;Parent=MS.gene79866.t1 |
chr3.1 | exon | 65713632 | 65713823 | 65713632 | ID=MS.gene79866.t1.exon2;Parent=MS.gene79866.t1 |
chr3.1 | CDS | 65713632 | 65713823 | 65713632 | ID=cds.MS.gene79866.t1;Parent=MS.gene79866.t1 |
chr3.1 | exon | 65715437 | 65715770 | 65715437 | ID=MS.gene79866.t1.exon3;Parent=MS.gene79866.t1 |
chr3.1 | CDS | 65715437 | 65715770 | 65715437 | ID=cds.MS.gene79866.t1;Parent=MS.gene79866.t1 |
chr3.1 | exon | 65715861 | 65716078 | 65715861 | ID=MS.gene79866.t1.exon4;Parent=MS.gene79866.t1 |
chr3.1 | CDS | 65715861 | 65716078 | 65715861 | ID=cds.MS.gene79866.t1;Parent=MS.gene79866.t1 |
chr3.1 | exon | 65716175 | 65716365 | 65716175 | ID=MS.gene79866.t1.exon5;Parent=MS.gene79866.t1 |
chr3.1 | CDS | 65716175 | 65716365 | 65716175 | ID=cds.MS.gene79866.t1;Parent=MS.gene79866.t1 |
chr3.1 | exon | 65716448 | 65716732 | 65716448 | ID=MS.gene79866.t1.exon6;Parent=MS.gene79866.t1 |
chr3.1 | CDS | 65716448 | 65716732 | 65716448 | ID=cds.MS.gene79866.t1;Parent=MS.gene79866.t1 |
chr3.1 | exon | 65716807 | 65716929 | 65716807 | ID=MS.gene79866.t1.exon7;Parent=MS.gene79866.t1 |
chr3.1 | CDS | 65716807 | 65716929 | 65716807 | ID=cds.MS.gene79866.t1;Parent=MS.gene79866.t1 |
chr3.1 | exon | 65716995 | 65717000 | 65716995 | ID=MS.gene79866.t1.exon8;Parent=MS.gene79866.t1 |
chr3.1 | CDS | 65716995 | 65717000 | 65716995 | ID=cds.MS.gene79866.t1;Parent=MS.gene79866.t1 |
Gene Sequence |
Protein sequence |