AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene79941

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79941.t1 MTR_4g036415 98.175 767 10 1 1 763 1 767 0.0 1516
MS.gene79941.t1 MTR_2g005590 47.154 123 59 2 213 329 162 284 2.09e-26 110
MS.gene79941.t1 MTR_7g074100 46.341 123 60 3 213 329 136 258 6.41e-26 108
MS.gene79941.t1 MTR_8g005550 44.776 134 67 4 202 329 121 253 1.06e-25 107
MS.gene79941.t1 MTR_8g006580 44.776 134 67 4 202 329 121 253 1.06e-25 107
MS.gene79941.t1 MTR_8g006605 44.776 134 67 4 202 329 121 253 1.06e-25 107
MS.gene79941.t1 MTR_8g005430 44.361 133 68 3 202 329 121 252 1.70e-25 107
MS.gene79941.t1 MTR_2g005590 46.774 124 59 3 213 329 162 285 7.69e-25 106
MS.gene79941.t1 MTR_3g083770 30.973 226 119 6 91 304 68 268 1.60e-24 110
MS.gene79941.t1 MTR_3g010220 39.623 159 85 5 180 329 113 269 1.88e-24 104
MS.gene79941.t1 MTR_3g083770 30.973 226 118 6 91 304 68 267 2.37e-24 109
MS.gene79941.t1 MTR_5g075710 44.800 125 59 4 213 329 135 257 3.51e-24 103
MS.gene79941.t1 MTR_5g075710 44.800 125 59 4 213 329 120 242 5.62e-24 102
MS.gene79941.t1 MTR_5g075710 43.902 123 63 2 213 329 98 220 3.02e-22 97.1
MS.gene79941.t1 MTR_3g075500 45.000 80 44 0 449 528 208 287 2.46e-14 74.7
MS.gene79941.t1 MTR_4g070080 45.946 74 40 0 450 523 9 82 4.10e-14 70.1
MS.gene79941.t1 MTR_4g081520 43.820 89 46 2 446 534 50 134 5.06e-14 70.5
MS.gene79941.t1 MTR_4g070080 45.946 74 40 0 450 523 9 82 9.22e-14 70.1
MS.gene79941.t1 MTR_3g062640 40.000 100 50 3 213 304 136 233 1.03e-13 72.0
MS.gene79941.t1 MTR_7g013740 36.782 87 55 0 442 528 35 121 2.12e-12 65.9
MS.gene79941.t1 MTR_4g070190 41.892 74 43 0 450 523 11 84 2.94e-12 65.9
MS.gene79941.t1 MTR_7g013730 34.091 88 58 0 442 529 35 122 4.22e-12 67.4
MS.gene79941.t1 MTR_4g104470 40.506 79 47 0 450 528 219 297 6.45e-12 67.8
MS.gene79941.t1 MTR_4g109540 35.366 82 53 0 447 528 42 123 7.20e-12 67.0
MS.gene79941.t1 MTR_1g045510 42.667 75 43 0 449 523 206 280 2.74e-11 65.5
MS.gene79941.t1 MTR_4g070140 43.243 74 42 0 450 523 11 84 3.58e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79941.t1 AT5G51300 66.543 810 198 18 7 763 15 804 0.0 943
MS.gene79941.t1 AT5G51300 66.543 810 198 18 7 763 15 804 0.0 943
MS.gene79941.t1 AT5G51300 66.543 810 198 18 7 763 15 804 0.0 943
MS.gene79941.t1 AT1G09660 46.565 131 62 3 207 329 142 272 4.74e-28 115
MS.gene79941.t1 AT1G09660 46.565 131 62 3 207 329 142 272 4.74e-28 115
MS.gene79941.t1 AT3G08620 44.361 133 67 3 202 328 83 214 5.52e-26 107
MS.gene79941.t1 AT3G08620 44.361 133 67 3 202 328 128 259 7.99e-26 108
MS.gene79941.t1 AT2G38610 43.704 135 69 3 202 330 129 262 3.30e-25 106
MS.gene79941.t1 AT2G38610 43.704 135 69 3 202 330 129 262 3.30e-25 106
MS.gene79941.t1 AT4G26480 44.715 123 62 3 213 329 78 200 5.73e-24 101
MS.gene79941.t1 AT4G26480 45.833 120 59 3 216 329 166 285 1.22e-23 102
MS.gene79941.t1 AT4G26480 45.833 120 59 3 216 329 166 285 1.22e-23 102
MS.gene79941.t1 AT5G56140 43.902 123 63 3 213 329 169 291 2.33e-23 102
MS.gene79941.t1 AT3G32940 29.767 215 102 7 97 304 55 227 1.49e-18 90.5
MS.gene79941.t1 AT1G09660 42.105 114 56 4 207 312 142 253 3.22e-16 80.1
MS.gene79941.t1 AT4G24770 45.570 79 43 0 449 527 246 324 8.47e-15 77.0
MS.gene79941.t1 AT4G24770 45.570 79 43 0 449 527 246 324 8.47e-15 77.0
MS.gene79941.t1 AT4G13860 41.026 78 46 0 447 524 3 80 3.42e-14 68.9
MS.gene79941.t1 AT3G23830 45.455 77 42 0 447 523 35 111 5.12e-13 67.4
MS.gene79941.t1 AT3G23830 45.455 77 42 0 447 523 35 111 5.12e-13 67.4
MS.gene79941.t1 AT4G13850 40.000 105 60 2 423 527 14 115 5.47e-13 67.0
MS.gene79941.t1 AT5G54580 42.466 73 42 0 446 518 55 127 6.07e-13 67.8
MS.gene79941.t1 AT1G18630 44.156 77 43 0 447 523 36 112 6.41e-13 67.8
MS.gene79941.t1 AT5G50250 44.000 75 42 0 449 523 209 283 9.69e-13 70.1
MS.gene79941.t1 AT4G39260 40.541 74 44 0 450 523 9 82 1.97e-12 64.3
MS.gene79941.t1 AT5G47320 43.210 81 46 0 447 527 31 111 3.08e-12 67.0
MS.gene79941.t1 AT4G13850 40.000 105 60 2 423 527 14 115 3.15e-12 65.5
MS.gene79941.t1 AT4G13850 40.000 105 60 2 423 527 14 115 3.89e-12 65.5
MS.gene79941.t1 AT4G13850 40.000 105 60 2 423 527 14 115 4.35e-12 65.5
MS.gene79941.t1 AT4G39260 40.541 74 44 0 450 523 9 82 4.81e-12 64.3
MS.gene79941.t1 AT1G03457 42.667 75 43 0 448 522 226 300 6.07e-12 68.2
MS.gene79941.t1 AT1G03457 38.679 106 57 1 417 522 317 414 1.03e-11 68.2
MS.gene79941.t1 AT5G61030 37.500 80 50 0 444 523 37 116 1.08e-11 67.0
MS.gene79941.t1 AT5G61030 37.500 80 50 0 444 523 37 116 1.08e-11 67.0
MS.gene79941.t1 AT1G03457 42.667 75 43 0 448 522 331 405 1.12e-11 68.2
MS.gene79941.t1 AT4G39260 40.541 74 44 0 450 523 9 82 1.30e-11 64.3
MS.gene79941.t1 AT2G21660 40.541 74 44 0 450 523 11 84 1.55e-11 63.5
MS.gene79941.t1 AT2G21660 40.541 74 44 0 450 523 11 84 2.23e-11 63.5
MS.gene79941.t1 AT2G37220 40.244 82 48 1 446 527 90 170 3.34e-11 65.5
MS.gene79941.t1 AT5G06210 36.634 101 56 2 447 540 34 133 6.26e-11 61.6

Find 286 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATTCAATGTTTGAATTTC+AGG 0.055676 4.3:+63849011 None:intergenic
ATCCAATTGTTTCAACAATT+TGG 0.151016 4.3:-63847994 MS.gene79941:CDS
ATCTTTGTCGGTTCCGCTTC+GGG 0.224492 4.3:+63849223 None:intergenic
TGTTATGGCAAAAGTTATTA+AGG 0.246290 4.3:-63847965 MS.gene79941:CDS
CCAACATATCCTGCATCTTA+TGG 0.257559 4.3:-63847370 MS.gene79941:CDS
CCGTTCTGATCGTTTGAATC+TGG 0.262072 4.3:+63849137 None:intergenic
GCAATTGGTTCGGGCAGTTC+TGG 0.291106 4.3:-63848162 MS.gene79941:CDS
TGGTGCCGTTGATGCCGTTT+TGG 0.296938 4.3:+63849324 None:intergenic
AATTCAACTTCCTGATTTCA+TGG 0.302742 4.3:-63849051 MS.gene79941:CDS
GAATGAGGATTTGCATGTTT+TGG 0.305991 4.3:-63848562 MS.gene79941:CDS
TGGTGCGAAGATTGTGATTC+GGG 0.311628 4.3:-63848649 MS.gene79941:CDS
CAGAATTTCTTGGCTGAGTT+GGG 0.312746 4.3:-63848228 MS.gene79941:CDS
CGGTTCGTCATCAGCCCATC+TGG 0.320048 4.3:+63849082 None:intergenic
GATCTTTGTCGGTTCCGCTT+CGG 0.321344 4.3:+63849222 None:intergenic
CCCATTGGGAGTGCTCCTCC+TGG 0.332877 4.3:-63847697 MS.gene79941:CDS
TCCGCCTGATTGATCTTTGT+CGG 0.336120 4.3:+63849211 None:intergenic
GGATTGTATGGAGGAGGAAT+AGG 0.337627 4.3:+63847640 None:intergenic
AAATCAGGAAGTTGAATTAC+CGG 0.338043 4.3:+63849056 None:intergenic
CACCAAATTGTTGAAACAAT+TGG 0.341079 4.3:+63847992 None:intergenic
AGTACACCACAAGCTGGATT+AGG 0.345327 4.3:-63848099 MS.gene79941:CDS
TTAGAGATGAAGAGTATTGT+AGG 0.347830 4.3:-63848407 MS.gene79941:CDS
AGGGGCTGGTGCGGTTAAAA+AGG 0.349731 4.3:-63848079 MS.gene79941:CDS
TAGTACTTTGGCAATTGGTT+CGG 0.349834 4.3:-63848172 MS.gene79941:CDS
GGCTGATGACGAACCGAAAC+CGG 0.354826 4.3:-63849075 MS.gene79941:CDS
CCTCCTTGGGCTAACAATAC+TGG 0.355353 4.3:-63848132 MS.gene79941:CDS
GTACACCACAAGCTGGATTA+GGG 0.357290 4.3:-63848098 MS.gene79941:CDS
GGAAGTTGAATTACCGGTTT+CGG 0.361177 4.3:+63849062 None:intergenic
TAAAGCTTCTTCTGAAGCTT+TGG 0.365077 4.3:+63848762 None:intergenic
GTAGTCTTAATCGCAGATTC+AGG 0.367160 4.3:+63848195 None:intergenic
ACAATTTGGTGAGATTGTTA+TGG 0.367806 4.3:-63847980 MS.gene79941:CDS
TATATGATAACATGGGGATT+AGG 0.369938 4.3:-63848899 MS.gene79941:CDS
AGTGCTCCTCCTGGGAGTTA+TGG 0.379254 4.3:-63847688 MS.gene79941:CDS
AGGTGGGGCGGAATGATTAC+TGG 0.380221 4.3:+63847249 None:intergenic
GATTAAGACTACTAGTACTT+TGG 0.382369 4.3:-63848184 MS.gene79941:CDS
GGAGCTGCTGGTGGCATTGA+AGG 0.382420 4.3:+63847394 None:intergenic
AGTACTTTGGCAATTGGTTC+GGG 0.382758 4.3:-63848171 MS.gene79941:CDS
GTTCTGGAAGCAATCCTCCT+TGG 0.384094 4.3:-63848146 MS.gene79941:CDS
CAGCATTGCAAATGCGCCTT+GGG 0.384172 4.3:-63847272 MS.gene79941:CDS
GATGCGCTTGAGGCTGCGGC+TGG 0.389783 4.3:-63848522 MS.gene79941:CDS
ACTACTAGTACTTTGGCAAT+TGG 0.391239 4.3:-63848177 MS.gene79941:CDS
TGGACGTGAATCGGTGTTAT+CGG 0.392557 4.3:+63849295 None:intergenic
AGGGAGCTTGCGGCTTTGAA+TGG 0.394860 4.3:-63848435 MS.gene79941:CDS
GTTTGTAAGCATTGTGGGGA+TGG 0.395994 4.3:-63848315 MS.gene79941:CDS
ATCGTTGAGCGGTGGTTGAT+TGG 0.401659 4.3:+63849367 None:intergenic
TTGGGCTTATTATTGGGCCT+AGG 0.403109 4.3:-63848704 MS.gene79941:CDS
AGCATAAGAGGCAGCAACTT+AGG 0.403660 4.3:-63848455 MS.gene79941:CDS
CTCTCCGAAAACGGTTTAAC+CGG 0.404174 4.3:-63849254 MS.gene79941:CDS
CCAATTGGCTGGCTTTGAAC+AGG 0.407319 4.3:+63847754 None:intergenic
CCACCCACTCTTGAGGATGA+TGG 0.408818 4.3:-63848021 MS.gene79941:CDS
TGGTCTGAAGTAGGGGCAGG+AGG 0.410645 4.3:+63847301 None:intergenic
GCTGCATTTCACCAGAAGCC+GGG 0.411186 4.3:+63847497 None:intergenic
CCGCCACCGGGACGAAGAAA+AGG 0.411481 4.3:-63849109 MS.gene79941:CDS
TTCTGGAAGCAATCCTCCTT+GGG 0.414696 4.3:-63848145 MS.gene79941:CDS
TGTCCGGTGAAGGGTGCTAC+TGG 0.415903 4.3:-63848273 MS.gene79941:CDS
GAGGCACATTTCCAATGCTC+TGG 0.415977 4.3:+63847203 None:intergenic
TCCGCTTCGGGTGTTGCCGC+CGG 0.416865 4.3:+63849235 None:intergenic
TCAATACCACCCATGAAATC+AGG 0.417840 4.3:+63849041 None:intergenic
ACTATTGCAGTAAGAGTTGC+TGG 0.418096 4.3:-63847835 MS.gene79941:CDS
GTCTGAAGTAGGGGCAGGAG+GGG 0.418816 4.3:+63847303 None:intergenic
GGTCAACCTATGCCTCCTTA+TGG 0.419163 4.3:-63847571 MS.gene79941:CDS
TGGAATCGGTGGACGTGAAT+CGG 0.422421 4.3:+63849286 None:intergenic
GAAGGAGATCTAGCCCCTTC+AGG 0.424049 4.3:+63848933 None:intergenic
CATTTGCAATGCTGTGTGAT+TGG 0.424259 4.3:+63847281 None:intergenic
TCCTCATTCTCCGACGGATC+AGG 0.430590 4.3:+63848576 None:intergenic
TATACCGATGAAAGAGTATC+CGG 0.432063 4.3:-63848739 MS.gene79941:CDS
TGTAGGTTGTGCGGTGAGCC+TGG 0.432089 4.3:-63848390 MS.gene79941:CDS
TCTGTACCGACCAACATGTA+TGG 0.432097 4.3:-63847427 MS.gene79941:CDS
TCGGCGGAAAAGACGTCATA+TGG 0.435235 4.3:-63847157 MS.gene79941:CDS
TGATCGTTTGAATCTGGCTG+TGG 0.435288 4.3:+63849143 None:intergenic
TGGGCTTATTATTGGGCCTA+GGG 0.437365 4.3:-63848703 MS.gene79941:CDS
TATACCGGCGGTGGTCCCAT+TGG 0.439352 4.3:-63847712 MS.gene79941:CDS
ACAGCCGATGCAGGTGGTCC+TGG 0.441297 4.3:+63847787 None:intergenic
AAGATTGTGATTCGGGGTAA+AGG 0.445533 4.3:-63848642 MS.gene79941:CDS
AGCTTCTTCTGAAGCTTTGG+TGG 0.445877 4.3:+63848765 None:intergenic
AGATTGTGATTCGGGGTAAA+GGG 0.445992 4.3:-63848641 MS.gene79941:CDS
CTGGTGCGAAGATTGTGATT+CGG 0.446401 4.3:-63848650 MS.gene79941:CDS
GTTATTAAGGATCGAATGAC+AGG 0.447306 4.3:-63847952 MS.gene79941:CDS
ATGATACAAATCTGTACATT+GGG 0.449523 4.3:-63848050 MS.gene79941:CDS
ACAGCATTGCAAATGCGCCT+TGG 0.451912 4.3:-63847273 MS.gene79941:CDS
GCTATTGCAGCCTGTGGATG+AGG 0.452749 4.3:-63848487 MS.gene79941:CDS
GGGAGCTTGCGGCTTTGAAT+GGG 0.453782 4.3:-63848434 MS.gene79941:CDS
TGCTGCATTTCACCAGAAGC+CGG 0.453965 4.3:+63847496 None:intergenic
AATCCACTTCTCTCCGAAAA+CGG 0.458472 4.3:-63849263 MS.gene79941:CDS
TGATGAGTATCAGAATTTCT+TGG 0.459979 4.3:-63848238 MS.gene79941:CDS
ATAAGTAGAATGTTGCAATC+TGG 0.461645 4.3:-63848975 MS.gene79941:CDS
CCATTGGGAGTGCTCCTCCT+GGG 0.463144 4.3:-63847696 MS.gene79941:CDS
ATACCGGCGGTGGTCCCATT+GGG 0.465286 4.3:-63847711 MS.gene79941:CDS
GGCTGATGCGCTTGAGGCTG+CGG 0.465364 4.3:-63848526 MS.gene79941:CDS
TGGAGGTACTCCTGTCCCAT+GGG 0.466274 4.3:-63847668 MS.gene79941:CDS
ACCTGATCCGTCGGAGAATG+AGG 0.468741 4.3:-63848577 MS.gene79941:CDS
AGGTTGTTTGTAAGCATTGT+GGG 0.470243 4.3:-63848320 MS.gene79941:CDS
GGTGGTCCTGGAGGTACAAC+AGG 0.470399 4.3:+63847799 None:intergenic
CTCAAGGCGATAGCCATTCA+TGG 0.472803 4.3:+63847864 None:intergenic
GCTTGAGGCTGCGGCTGGTA+TGG 0.473691 4.3:-63848517 MS.gene79941:CDS
GACCACCGCCGGTATATTGT+TGG 0.475580 4.3:+63847719 None:intergenic
TTCTGAGTATGAGAAATTCA+TGG 0.476992 4.3:-63847128 MS.gene79941:CDS
ATCCCCATGTTATCATATAT+AGG 0.477349 4.3:+63848903 None:intergenic
ACCACCGCCGGTATATTGTT+GGG 0.478566 4.3:+63847720 None:intergenic
GCATAAGGATTGTATGGAGG+AGG 0.478828 4.3:+63847634 None:intergenic
GGATATGTTGGTGGAGCTGC+TGG 0.481070 4.3:+63847382 None:intergenic
TGCAGCAGAATTACCCTCCT+GGG 0.481585 4.3:-63847480 MS.gene79941:CDS
GCATAAGAGGCAGCAACTTA+GGG 0.481868 4.3:-63848454 MS.gene79941:CDS
CCTCAGCCTGTTGTACCTCC+AGG 0.483014 4.3:-63847805 MS.gene79941:CDS
ATGAATGGCTATCGCCTTGA+GGG 0.484462 4.3:-63847862 MS.gene79941:CDS
GATACATAGTTGATCCAGGC+GGG 0.485027 4.3:+63847605 None:intergenic
TCAGAATTTCTTGGCTGAGT+TGG 0.489105 4.3:-63848229 MS.gene79941:CDS
AAGAGGATGGAGAAGGAGAC+TGG 0.491145 4.3:-63848669 MS.gene79941:CDS
TCTGAAGTAGGGGCAGGAGG+GGG 0.491665 4.3:+63847304 None:intergenic
GGGGACCTGTAGGCATGGGT+GGG 0.492437 4.3:+63847539 None:intergenic
CACGCATACTGACGATGGCC+AGG 0.493620 4.3:+63848372 None:intergenic
ATGGATAGGCACCAATTGGC+TGG 0.493844 4.3:+63847743 None:intergenic
TTATTATCAGACTGCACCCC+AGG 0.496388 4.3:+63847463 None:intergenic
GAGAGAAGTGGATTTGGAAT+CGG 0.498073 4.3:+63849272 None:intergenic
AATGCAATTGTTGCCATGAA+TGG 0.498742 4.3:-63847877 MS.gene79941:CDS
CCTTTAGATGATCGTCCTGA+AGG 0.501343 4.3:-63848948 MS.gene79941:CDS
TCATCCTAGTATTGATTGTC+CGG 0.504611 4.3:-63848289 MS.gene79941:CDS
CAGGTTTGAGTAAAGGATAC+GGG 0.505016 4.3:-63847933 MS.gene79941:CDS
CCTGTTCAAAGCCAGCCAAT+TGG 0.505090 4.3:-63847754 MS.gene79941:CDS
CAATACCCACCCATGCCTAC+AGG 0.505551 4.3:-63847544 MS.gene79941:CDS
CTGGCTTTGAACAGGATAAG+TGG 0.506527 4.3:+63847762 None:intergenic
CCATAAGATGCAGGATATGT+TGG 0.508849 4.3:+63847370 None:intergenic
CTTTAGATGATCGTCCTGAA+GGG 0.510187 4.3:-63848947 MS.gene79941:CDS
GGAGGAGCATAAGGATTGTA+TGG 0.510415 4.3:+63847628 None:intergenic
TAGTATTGATTGTCCGGTGA+AGG 0.510881 4.3:-63848283 MS.gene79941:CDS
CTGCATTTCACCAGAAGCCG+GGG 0.512446 4.3:+63847498 None:intergenic
CTGTGTGATTGGTCTGAAGT+AGG 0.514366 4.3:+63847292 None:intergenic
CAGAACGGCGAAGCCGCCAC+CGG 0.515344 4.3:-63849122 MS.gene79941:CDS
GTGGGTCCCATCGGCTTCTA+CGG 0.516793 4.3:+63849162 None:intergenic
TCTGCAGACGAAGGAGGAGG+TGG 0.517016 4.3:+63847232 None:intergenic
GGAGGAATAGGAGGTCCCCA+TGG 0.517280 4.3:+63847652 None:intergenic
CGAATGACAGGTTTGAGTAA+AGG 0.518211 4.3:-63847940 MS.gene79941:CDS
ATGTTATCATATATAGGTTC+AGG 0.518429 4.3:+63848909 None:intergenic
CCAGGAGGAGCACTCCCAAT+GGG 0.520762 4.3:+63847697 None:intergenic
CAACTTCCTGATTTCATGGG+TGG 0.520799 4.3:-63849047 MS.gene79941:CDS
TTCCCAGTAGCACCCTTCAC+CGG 0.521265 4.3:+63848270 None:intergenic
ATAGGAGGTCCCCATGGGAC+AGG 0.522360 4.3:+63847658 None:intergenic
ATTCAACTTCCTGATTTCAT+GGG 0.522392 4.3:-63849050 MS.gene79941:CDS
GATGATACAAATCTGTACAT+TGG 0.522653 4.3:-63848051 MS.gene79941:CDS
TAAGTGGGCACAGCCGATGC+AGG 0.526356 4.3:+63847778 None:intergenic
GTATTTGCCACCCACTCTTG+AGG 0.527496 4.3:-63848028 MS.gene79941:CDS
GGTGGGTATTGAACACCATA+AGG 0.528437 4.3:+63847556 None:intergenic
GGAGGAACTGCATTATAGTA+AGG 0.528530 4.3:+63847334 None:intergenic
TGGGATGGATAGGCACCAAT+TGG 0.528906 4.3:+63847739 None:intergenic
ACAGGTTTGAGTAAAGGATA+CGG 0.530195 4.3:-63847934 MS.gene79941:CDS
ATGCAGCAGAATTACCCTCC+TGG 0.530640 4.3:-63847481 MS.gene79941:CDS
TCCGCCGATGAGTTAGGAGG+AGG 0.531623 4.3:+63847172 None:intergenic
GGTCTGAAGTAGGGGCAGGA+GGG 0.532121 4.3:+63847302 None:intergenic
GGTAAAGGGTCGGTGAAAGA+AGG 0.532993 4.3:-63848627 MS.gene79941:CDS
ATGGAGGTACTCCTGTCCCA+TGG 0.534335 4.3:-63847669 MS.gene79941:CDS
GCAGATCAATCCCAGAGCAT+TGG 0.537143 4.3:-63847214 MS.gene79941:CDS
GAGTTAGGAGGAGGCATAGG+TGG 0.538669 4.3:+63847181 None:intergenic
GGAACCGACAAAGATCAATC+AGG 0.538815 4.3:-63849215 MS.gene79941:CDS
AATTTCTTGGCTGAGTTGGG+TGG 0.540197 4.3:-63848225 MS.gene79941:CDS
AGGCACATTTCCAATGCTCT+GGG 0.542648 4.3:+63847204 None:intergenic
ATTGGAATCGAGAGCCTCCA+TGG 0.545289 4.3:+63849385 None:intergenic
GTCCGGTGAAGGGTGCTACT+GGG 0.545922 4.3:-63848272 MS.gene79941:CDS
ATCGGTGTTATCGGTGGTGG+TGG 0.547897 4.3:+63849304 None:intergenic
GATCGTTTGAATCTGGCTGT+GGG 0.548883 4.3:+63849144 None:intergenic
GGTATATTGTTGGGATGGAT+AGG 0.549190 4.3:+63847729 None:intergenic
GGAGGATACATAGTTGATCC+AGG 0.549406 4.3:+63847601 None:intergenic
CTGCAGACGAAGGAGGAGGT+GGG 0.550760 4.3:+63847233 None:intergenic
TCAGCAGGTGGCTTAAAAGC+AGG 0.550868 4.3:+63848795 None:intergenic
GGAGGATATCCATAAGATGC+AGG 0.551040 4.3:+63847361 None:intergenic
AGGTAGGTTGCAACAGAAGA+GGG 0.552516 4.3:-63848607 MS.gene79941:CDS
CTGTACCGACCAACATGTAT+GGG 0.553362 4.3:-63847426 MS.gene79941:CDS
CCTTCAGGACGATCATCTAA+AGG 0.555385 4.3:+63848948 None:intergenic
TGCAGACGAAGGAGGAGGTG+GGG 0.556279 4.3:+63847234 None:intergenic
GCATTATAGTAAGGTGGAGG+AGG 0.556594 4.3:+63847343 None:intergenic
TGAGGCTGCGGCTGGTATGG+TGG 0.557666 4.3:-63848514 MS.gene79941:CDS
TTCACCGGACAATCAATACT+AGG 0.560422 4.3:+63848285 None:intergenic
GCTCCTCCTGGGAGTTATGG+AGG 0.560516 4.3:-63847685 MS.gene79941:CDS
TGAACACCATAAGGAGGCAT+AGG 0.560821 4.3:+63847565 None:intergenic
GGGTGCTACTGGGAAGAAGA+TGG 0.562289 4.3:-63848262 MS.gene79941:CDS
CATGAATGGCTATCGCCTTG+AGG 0.563895 4.3:-63847863 MS.gene79941:CDS
TTTGGTGGTCTATAATCAGC+AGG 0.566022 4.3:+63848780 None:intergenic
CTGCAATAGTTCGACCCTCA+AGG 0.566323 4.3:+63847848 None:intergenic
TGTGTGATTGGTCTGAAGTA+GGG 0.566402 4.3:+63847293 None:intergenic
AATCTGGCTGTGGGTCCCAT+CGG 0.566587 4.3:+63849153 None:intergenic
AGAACGGCGAAGCCGCCACC+GGG 0.567142 4.3:-63849121 MS.gene79941:CDS
CCGCCGGTATATTGTTGGGA+TGG 0.568816 4.3:+63847724 None:intergenic
GTGGGCACAGCCGATGCAGG+TGG 0.568904 4.3:+63847781 None:intergenic
AGAAGTGGATTTGGAATCGG+TGG 0.569201 4.3:+63849275 None:intergenic
TATCCATCCCAACAATATAC+CGG 0.570762 4.3:-63847727 MS.gene79941:CDS
GAACCTATATATGATAACAT+GGG 0.570869 4.3:-63848906 MS.gene79941:CDS
TTAGGAGGAGGCATAGGTGG+AGG 0.571215 4.3:+63847184 None:intergenic
TACATAGTTGATCCAGGCGG+GGG 0.571433 4.3:+63847607 None:intergenic
AGCTGGATTAGGGGCTGGTG+CGG 0.572157 4.3:-63848088 MS.gene79941:CDS
CCACAAGCTGGATTAGGGGC+TGG 0.572511 4.3:-63848093 MS.gene79941:CDS
GCTAACAATACTGGTTCAGC+TGG 0.572758 4.3:-63848123 MS.gene79941:CDS
TGAATCGGTGTTATCGGTGG+TGG 0.573466 4.3:+63849301 None:intergenic
ATTCCCCAAAACGGCATCAA+CGG 0.574006 4.3:-63849329 MS.gene79941:CDS
TACTCAGAAGAGGATGGAGA+AGG 0.574391 4.3:-63848676 MS.gene79941:CDS
TGAACCTATATATGATAACA+TGG 0.574594 4.3:-63848907 MS.gene79941:CDS
TGATCTGCAGACGAAGGAGG+AGG 0.574758 4.3:+63847229 None:intergenic
GGCTTATTATTGGGCCTAGG+GGG 0.577049 4.3:-63848701 MS.gene79941:CDS
TAAGATGCAGGATATGTTGG+TGG 0.577189 4.3:+63847373 None:intergenic
GATTGGTCTGAAGTAGGGGC+AGG 0.578662 4.3:+63847298 None:intergenic
AAGGGTCGGTGAAAGAAGGT+AGG 0.578669 4.3:-63848623 MS.gene79941:CDS
CCAGCCCCTAATCCAGCTTG+TGG 0.579159 4.3:+63848093 None:intergenic
GGGGAATACTCAGAAGAGGA+TGG 0.579237 4.3:-63848682 MS.gene79941:CDS
TCATTCAAAACCTCATCCAC+AGG 0.579571 4.3:+63848477 None:intergenic
CCCAGGAGGAGCACTCCCAA+TGG 0.580485 4.3:+63847696 None:intergenic
AGTATTGATTGTCCGGTGAA+GGG 0.580602 4.3:-63848282 MS.gene79941:CDS
GCGGAATGATTACTGGCCCA+AGG 0.581270 4.3:+63847256 None:intergenic
TACCCCGGATACTCTTTCAT+CGG 0.581753 4.3:+63848735 None:intergenic
TCCCAACAATATACCGGCGG+TGG 0.583169 4.3:-63847721 MS.gene79941:CDS
GGAGGTACAACAGGCTGAGG+AGG 0.586166 4.3:+63847808 None:intergenic
AGACGAAGGAGGAGGTGGGG+CGG 0.587962 4.3:+63847237 None:intergenic
GCTGGTAGTACACCACAAGC+TGG 0.588576 4.3:-63848105 MS.gene79941:CDS
ATACCGATGAAAGAGTATCC+GGG 0.589156 4.3:-63848738 MS.gene79941:CDS
CGAAGAAAAGGAAATCCAGA+TGG 0.589301 4.3:-63849097 MS.gene79941:CDS
GAGGTTGTTTGTAAGCATTG+TGG 0.589881 4.3:-63848321 MS.gene79941:CDS
TGTAAGCATTGTGGGGATGG+TGG 0.589931 4.3:-63848312 MS.gene79941:CDS
GGATACGGCTGATGCGCTTG+AGG 0.590654 4.3:-63848532 MS.gene79941:CDS
CAAACCATCATCCTCAAGAG+TGG 0.591247 4.3:+63848017 None:intergenic
GAGAGTATCGTGCTCGCGAG+AGG 0.592452 4.3:-63848866 MS.gene79941:CDS
ATAGGTTGACCATGCATAGG+AGG 0.592649 4.3:+63847583 None:intergenic
CCTGGAGGTACAACAGGCTG+AGG 0.594819 4.3:+63847805 None:intergenic
AAGGTAGGTTGCAACAGAAG+AGG 0.594916 4.3:-63848608 MS.gene79941:CDS
ACTCCCAATGGGACCACCGC+CGG 0.597493 4.3:+63847708 None:intergenic
GAGGAATAGGAGGTCCCCAT+GGG 0.598071 4.3:+63847653 None:intergenic
TCATATATAGGTTCAGGTGA+AGG 0.598965 4.3:+63848915 None:intergenic
ACCGGCGGCAACACCCGAAG+CGG 0.599063 4.3:-63849236 MS.gene79941:CDS
GTGTGATTGGTCTGAAGTAG+GGG 0.599262 4.3:+63847294 None:intergenic
CATTGTGTTCCCATACATGT+TGG 0.599711 4.3:+63847417 None:intergenic
ACCTCCAGGACCACCTGCAT+CGG 0.601116 4.3:-63847791 MS.gene79941:CDS
GATGAGTTAGGAGGAGGCAT+AGG 0.601322 4.3:+63847178 None:intergenic
TGGCTTTGAACAGGATAAGT+GGG 0.601464 4.3:+63847763 None:intergenic
GGGCTTATTATTGGGCCTAG+GGG 0.601483 4.3:-63848702 MS.gene79941:CDS
TGGGATTGATCTGCAGACGA+AGG 0.602817 4.3:+63847223 None:intergenic
GTGTTCCCATACATGTTGGT+CGG 0.605470 4.3:+63847421 None:intergenic
TTGTATGGAGGAGGAATAGG+AGG 0.606833 4.3:+63847643 None:intergenic
GATTGATCTGCAGACGAAGG+AGG 0.607157 4.3:+63847226 None:intergenic
GAAACCCTAATTCCCCAAAA+CGG 0.607359 4.3:-63849338 MS.gene79941:CDS
GACTTCGACGTTTAAGAGTG+AGG 0.609080 4.3:-63848340 MS.gene79941:CDS
ACTATGTATCCTCCTATGCA+TGG 0.613317 4.3:-63847592 MS.gene79941:CDS
AACGACGCCGTAGAAGCCGA+TGG 0.617732 4.3:-63849169 MS.gene79941:CDS
ATACATAGTTGATCCAGGCG+GGG 0.618361 4.3:+63847606 None:intergenic
CCATCATCCTCAAGAGTGGG+TGG 0.619730 4.3:+63848021 None:intergenic
GGTGGTCTATAATCAGCAGG+TGG 0.619754 4.3:+63848783 None:intergenic
AAACCATCATCCTCAAGAGT+GGG 0.620492 4.3:+63848018 None:intergenic
GGTTGTTTGTAAGCATTGTG+GGG 0.621386 4.3:-63848319 MS.gene79941:CDS
GGATTTGAAACCTGATCCGT+CGG 0.621920 4.3:-63848586 MS.gene79941:CDS
TGCAAATCCTCATTCTCCGA+CGG 0.622653 4.3:+63848570 None:intergenic
GCAGCAACTTAGGGAGCTTG+CGG 0.623589 4.3:-63848445 MS.gene79941:CDS
AACCTATATATGATAACATG+GGG 0.629309 4.3:-63848905 MS.gene79941:CDS
GGAGTACCTCCATAACTCCC+AGG 0.630088 4.3:+63847679 None:intergenic
TTTAGATGATCGTCCTGAAG+GGG 0.630920 4.3:-63848946 MS.gene79941:CDS
TGTGATTCGGGGTAAAGGGT+CGG 0.632552 4.3:-63848637 MS.gene79941:CDS
TATGCCTCCTCCTAACTCAT+CGG 0.633008 4.3:-63847176 MS.gene79941:CDS
ACTGCATTATAGTAAGGTGG+AGG 0.633851 4.3:+63847340 None:intergenic
GGAGCATAAGGATTGTATGG+AGG 0.640513 4.3:+63847631 None:intergenic
GTCAGTATGCGTGTCCTACG+AGG 0.640855 4.3:-63848362 MS.gene79941:CDS
GGAGAAGCTATTGCAGCCTG+TGG 0.641988 4.3:-63848493 MS.gene79941:CDS
GAAGAAAAGGAAATCCAGAT+GGG 0.642143 4.3:-63849096 MS.gene79941:CDS
GAACCAGTATTGTTAGCCCA+AGG 0.643482 4.3:+63848129 None:intergenic
TACACCACAAGCTGGATTAG+GGG 0.643761 4.3:-63848097 MS.gene79941:CDS
GCCTCCTCCTAACTCATCGG+CGG 0.644516 4.3:-63847173 MS.gene79941:CDS
GGAACTGCATTATAGTAAGG+TGG 0.646045 4.3:+63847337 None:intergenic
TCCGAAAACGGTTTAACCGG+CGG 0.646554 4.3:-63849251 MS.gene79941:CDS
ACGACGCCGTAGAAGCCGAT+GGG 0.646571 4.3:-63849168 MS.gene79941:CDS
TATGTTGGTGGAGCTGCTGG+TGG 0.648824 4.3:+63847385 None:intergenic
TGCATTTCACCAGAAGCCGG+GGG 0.648939 4.3:+63847499 None:intergenic
TACCGATGAAAGAGTATCCG+GGG 0.650644 4.3:-63848737 MS.gene79941:CDS
GTTTCGGGATTATCGTTGAG+CGG 0.651830 4.3:+63849356 None:intergenic
TTATCAGACTGCACCCCAGG+AGG 0.652632 4.3:+63847466 None:intergenic
GGCATAGGTTGACCATGCAT+AGG 0.653836 4.3:+63847580 None:intergenic
AGCCCAATAAAATTATACCC+CGG 0.654514 4.3:+63848720 None:intergenic
TCGGGATTATCGTTGAGCGG+TGG 0.661410 4.3:+63849359 None:intergenic
CCAGTATTGTTAGCCCAAGG+AGG 0.662800 4.3:+63848132 None:intergenic
GCCGATGCAGGTGGTCCTGG+AGG 0.664010 4.3:+63847790 None:intergenic
TATCAGACTGCACCCCAGGA+GGG 0.665423 4.3:+63847467 None:intergenic
TTAAACGTCGAAGTCCTCGT+AGG 0.666107 4.3:+63848348 None:intergenic
GGAGGTACTCCTGTCCCATG+GGG 0.666907 4.3:-63847667 MS.gene79941:CDS
ACGTGAATCGGTGTTATCGG+TGG 0.679354 4.3:+63849298 None:intergenic
GCAGCAGAATTACCCTCCTG+GGG 0.683396 4.3:-63847479 MS.gene79941:CDS
CCAGATTCAAACGATCAGAA+CGG 0.685543 4.3:-63849137 MS.gene79941:CDS
GGGTATTGAACACCATAAGG+AGG 0.687098 4.3:+63847559 None:intergenic
ACCGACAAAGATCAATCAGG+CGG 0.691376 4.3:-63849212 MS.gene79941:CDS
GGTGCGAAGATTGTGATTCG+GGG 0.703452 4.3:-63848648 MS.gene79941:CDS
GAAGAGTATTGTAGGTTGTG+CGG 0.704258 4.3:-63848399 MS.gene79941:CDS
CCATCCCAACAATATACCGG+CGG 0.713231 4.3:-63847724 MS.gene79941:CDS
TAGGACACGCATACTGACGA+TGG 0.736494 4.3:+63848367 None:intergenic
GTACCTCCATAACTCCCAGG+AGG 0.745055 4.3:+63847682 None:intergenic
GAAGTATGCTGATATCACAA+TGG 0.751667 4.3:-63847905 MS.gene79941:CDS
GGATACATAGTTGATCCAGG+CGG 0.770511 4.3:+63847604 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTATTGGGCTTATTAT+TGG - chr4.3:63847786-63847805 MS.gene79941:CDS 20.0%
!!! ATTTTATTGGGCTTATTATT+GGG - chr4.3:63847787-63847806 MS.gene79941:CDS 20.0%
! AACCTATATATGATAACATG+GGG - chr4.3:63847592-63847611 MS.gene79941:CDS 25.0%
! ATCCAATTGTTTCAACAATT+TGG - chr4.3:63848503-63848522 MS.gene79941:CDS 25.0%
! ATGATACAAATCTGTACATT+GGG - chr4.3:63848447-63848466 MS.gene79941:CDS 25.0%
! ATGTTATCATATATAGGTTC+AGG + chr4.3:63847591-63847610 None:intergenic 25.0%
! CTATTCAATGTTTGAATTTC+AGG + chr4.3:63847489-63847508 None:intergenic 25.0%
! GAACCTATATATGATAACAT+GGG - chr4.3:63847591-63847610 MS.gene79941:CDS 25.0%
! TGAACCTATATATGATAACA+TGG - chr4.3:63847590-63847609 MS.gene79941:CDS 25.0%
! TGTTATGGCAAAAGTTATTA+AGG - chr4.3:63848532-63848551 MS.gene79941:CDS 25.0%
AAATCAGGAAGTTGAATTAC+CGG + chr4.3:63847444-63847463 None:intergenic 30.0%
AATTCAACTTCCTGATTTCA+TGG - chr4.3:63847446-63847465 MS.gene79941:CDS 30.0%
ATAAGTAGAATGTTGCAATC+TGG - chr4.3:63847522-63847541 MS.gene79941:CDS 30.0%
ATCCCCATGTTATCATATAT+AGG + chr4.3:63847597-63847616 None:intergenic 30.0%
ATTCAACTTCCTGATTTCAT+GGG - chr4.3:63847447-63847466 MS.gene79941:CDS 30.0%
CACCAAATTGTTGAAACAAT+TGG + chr4.3:63848508-63848527 None:intergenic 30.0%
GATGATACAAATCTGTACAT+TGG - chr4.3:63848446-63848465 MS.gene79941:CDS 30.0%
GATTAAGACTACTAGTACTT+TGG - chr4.3:63848313-63848332 MS.gene79941:CDS 30.0%
TATATGATAACATGGGGATT+AGG - chr4.3:63847598-63847617 MS.gene79941:CDS 30.0%
TGATGAGTATCAGAATTTCT+TGG - chr4.3:63848259-63848278 MS.gene79941:CDS 30.0%
TTCTGAGTATGAGAAATTCA+TGG - chr4.3:63849369-63849388 MS.gene79941:CDS 30.0%
! ACAATTTGGTGAGATTGTTA+TGG - chr4.3:63848517-63848536 MS.gene79941:CDS 30.0%
! ATCCGGGGTATAATTTTATT+GGG - chr4.3:63847775-63847794 MS.gene79941:CDS 30.0%
! TATCCGGGGTATAATTTTAT+TGG - chr4.3:63847774-63847793 MS.gene79941:CDS 30.0%
!! TTAGAGATGAAGAGTATTGT+AGG - chr4.3:63848090-63848109 MS.gene79941:CDS 30.0%
AATGCAATTGTTGCCATGAA+TGG - chr4.3:63848620-63848639 MS.gene79941:CDS 35.0%
ACAGGTTTGAGTAAAGGATA+CGG - chr4.3:63848563-63848582 MS.gene79941:CDS 35.0%
ACTACTAGTACTTTGGCAAT+TGG - chr4.3:63848320-63848339 MS.gene79941:CDS 35.0%
AGCCCAATAAAATTATACCC+CGG + chr4.3:63847780-63847799 None:intergenic 35.0%
GAAGAAAAGGAAATCCAGAT+GGG - chr4.3:63847401-63847420 MS.gene79941:CDS 35.0%
GAAGTATGCTGATATCACAA+TGG - chr4.3:63848592-63848611 MS.gene79941:CDS 35.0%
GTTATTAAGGATCGAATGAC+AGG - chr4.3:63848545-63848564 MS.gene79941:CDS 35.0%
TAGTACTTTGGCAATTGGTT+CGG - chr4.3:63848325-63848344 MS.gene79941:CDS 35.0%
TATCCATCCCAACAATATAC+CGG - chr4.3:63848770-63848789 MS.gene79941:CDS 35.0%
TCATATATAGGTTCAGGTGA+AGG + chr4.3:63847585-63847604 None:intergenic 35.0%
! AGGTTGTTTGTAAGCATTGT+GGG - chr4.3:63848177-63848196 MS.gene79941:CDS 35.0%
! GAATGAGGATTTGCATGTTT+TGG - chr4.3:63847935-63847954 MS.gene79941:CDS 35.0%
!! TAAAGCTTCTTCTGAAGCTT+TGG + chr4.3:63847738-63847757 None:intergenic 35.0%
!! TATACCGATGAAAGAGTATC+CGG - chr4.3:63847758-63847777 MS.gene79941:CDS 35.0%
!! TCATCCTAGTATTGATTGTC+CGG - chr4.3:63848208-63848227 MS.gene79941:CDS 35.0%
!!! AGGTTTTGAATGAGCATAAG+AGG - chr4.3:63848030-63848049 MS.gene79941:CDS 35.0%
AAACCATCATCCTCAAGAGT+GGG + chr4.3:63848482-63848501 None:intergenic 40.0%
AATCCACTTCTCTCCGAAAA+CGG - chr4.3:63847234-63847253 MS.gene79941:CDS 40.0%
ACTATGTATCCTCCTATGCA+TGG - chr4.3:63848905-63848924 MS.gene79941:CDS 40.0%
ACTATTGCAGTAAGAGTTGC+TGG - chr4.3:63848662-63848681 MS.gene79941:CDS 40.0%
ACTGCATTATAGTAAGGTGG+AGG + chr4.3:63849160-63849179 None:intergenic 40.0%
CAGAATTTCTTGGCTGAGTT+GGG - chr4.3:63848269-63848288 MS.gene79941:CDS 40.0%
CAGGTTTGAGTAAAGGATAC+GGG - chr4.3:63848564-63848583 MS.gene79941:CDS 40.0%
CATTGTGTTCCCATACATGT+TGG + chr4.3:63849083-63849102 None:intergenic 40.0%
CATTTGCAATGCTGTGTGAT+TGG + chr4.3:63849219-63849238 None:intergenic 40.0%
CCAACATATCCTGCATCTTA+TGG - chr4.3:63849127-63849146 MS.gene79941:CDS 40.0%
CCAGATTCAAACGATCAGAA+CGG - chr4.3:63847360-63847379 MS.gene79941:CDS 40.0%
CCATAAGATGCAGGATATGT+TGG + chr4.3:63849130-63849149 None:intergenic 40.0%
CGAAGAAAAGGAAATCCAGA+TGG - chr4.3:63847400-63847419 MS.gene79941:CDS 40.0%
CGAATGACAGGTTTGAGTAA+AGG - chr4.3:63848557-63848576 MS.gene79941:CDS 40.0%
CTTTAGATGATCGTCCTGAA+GGG - chr4.3:63847550-63847569 MS.gene79941:CDS 40.0%
GAAACCCTAATTCCCCAAAA+CGG - chr4.3:63847159-63847178 MS.gene79941:CDS 40.0%
GGAACTGCATTATAGTAAGG+TGG + chr4.3:63849163-63849182 None:intergenic 40.0%
GGAGGAACTGCATTATAGTA+AGG + chr4.3:63849166-63849185 None:intergenic 40.0%
GGTATATTGTTGGGATGGAT+AGG + chr4.3:63848771-63848790 None:intergenic 40.0%
TAAGATGCAGGATATGTTGG+TGG + chr4.3:63849127-63849146 None:intergenic 40.0%
TCAATACCACCCATGAAATC+AGG + chr4.3:63847459-63847478 None:intergenic 40.0%
TCAGAATTTCTTGGCTGAGT+TGG - chr4.3:63848268-63848287 MS.gene79941:CDS 40.0%
TCATTCAAAACCTCATCCAC+AGG + chr4.3:63848023-63848042 None:intergenic 40.0%
TTCACCGGACAATCAATACT+AGG + chr4.3:63848215-63848234 None:intergenic 40.0%
TTTAGATGATCGTCCTGAAG+GGG - chr4.3:63847551-63847570 MS.gene79941:CDS 40.0%
! AAGATTGTGATTCGGGGTAA+AGG - chr4.3:63847855-63847874 MS.gene79941:CDS 40.0%
! AGATTGTGATTCGGGGTAAA+GGG - chr4.3:63847856-63847875 MS.gene79941:CDS 40.0%
! AGTACTTTGGCAATTGGTTC+GGG - chr4.3:63848326-63848345 MS.gene79941:CDS 40.0%
! GAGAGAAGTGGATTTGGAAT+CGG + chr4.3:63847228-63847247 None:intergenic 40.0%
! GAGGTTGTTTGTAAGCATTG+TGG - chr4.3:63848176-63848195 MS.gene79941:CDS 40.0%
! GGTTGTTTGTAAGCATTGTG+GGG - chr4.3:63848178-63848197 MS.gene79941:CDS 40.0%
! GTAGTCTTAATCGCAGATTC+AGG + chr4.3:63848305-63848324 None:intergenic 40.0%
! TTTGGTGGTCTATAATCAGC+AGG + chr4.3:63847720-63847739 None:intergenic 40.0%
!! AGTATTGATTGTCCGGTGAA+GGG - chr4.3:63848215-63848234 MS.gene79941:CDS 40.0%
!! ATACCGATGAAAGAGTATCC+GGG - chr4.3:63847759-63847778 MS.gene79941:CDS 40.0%
!! GAAGAGTATTGTAGGTTGTG+CGG - chr4.3:63848098-63848117 MS.gene79941:CDS 40.0%
!! GGAAGTTGAATTACCGGTTT+CGG + chr4.3:63847438-63847457 None:intergenic 40.0%
!! TAGTATTGATTGTCCGGTGA+AGG - chr4.3:63848214-63848233 MS.gene79941:CDS 40.0%
!! TGGCTTTGAACAGGATAAGT+GGG + chr4.3:63848737-63848756 None:intergenic 40.0%
!! TGTGTGATTGGTCTGAAGTA+GGG + chr4.3:63849207-63849226 None:intergenic 40.0%
!! TTTTCGGAGAGAAGTGGATT+TGG + chr4.3:63847234-63847253 None:intergenic 40.0%
!! TTTTGGGGAATTAGGGTTTC+GGG + chr4.3:63847159-63847178 None:intergenic 40.0%
!!! GGATTTGCATGTTTTGGTTG+AGG - chr4.3:63847941-63847960 MS.gene79941:CDS 40.0%
!!! GTTTTGGGGAATTAGGGTTT+CGG + chr4.3:63847160-63847179 None:intergenic 40.0%
!!! TTTGCATGTTTTGGTTGAGG+CGG - chr4.3:63847944-63847963 MS.gene79941:CDS 40.0%
AAGGTAGGTTGCAACAGAAG+AGG - chr4.3:63847889-63847908 MS.gene79941:CDS 45.0%
ACCGACAAAGATCAATCAGG+CGG - chr4.3:63847285-63847304 MS.gene79941:CDS 45.0%
AGCATAAGAGGCAGCAACTT+AGG - chr4.3:63848042-63848061 MS.gene79941:CDS 45.0%
AGGCACATTTCCAATGCTCT+GGG + chr4.3:63849296-63849315 None:intergenic 45.0%
AGGTAGGTTGCAACAGAAGA+GGG - chr4.3:63847890-63847909 MS.gene79941:CDS 45.0%
AGTACACCACAAGCTGGATT+AGG - chr4.3:63848398-63848417 MS.gene79941:CDS 45.0%
ATACATAGTTGATCCAGGCG+GGG + chr4.3:63848894-63848913 None:intergenic 45.0%
ATGAATGGCTATCGCCTTGA+GGG - chr4.3:63848635-63848654 MS.gene79941:CDS 45.0%
ATTCCCCAAAACGGCATCAA+CGG - chr4.3:63847168-63847187 MS.gene79941:CDS 45.0%
CAAACCATCATCCTCAAGAG+TGG + chr4.3:63848483-63848502 None:intergenic 45.0%
CAACTTCCTGATTTCATGGG+TGG - chr4.3:63847450-63847469 MS.gene79941:CDS 45.0%
CCGTTCTGATCGTTTGAATC+TGG + chr4.3:63847363-63847382 None:intergenic 45.0%
CCTTCAGGACGATCATCTAA+AGG + chr4.3:63847552-63847571 None:intergenic 45.0%
CCTTTAGATGATCGTCCTGA+AGG - chr4.3:63847549-63847568 MS.gene79941:CDS 45.0%
CTCTCCGAAAACGGTTTAAC+CGG - chr4.3:63847243-63847262 MS.gene79941:CDS 45.0%
CTGGTGCGAAGATTGTGATT+CGG - chr4.3:63847847-63847866 MS.gene79941:CDS 45.0%
GAACCAGTATTGTTAGCCCA+AGG + chr4.3:63848371-63848390 None:intergenic 45.0%
GACTTCGACGTTTAAGAGTG+AGG - chr4.3:63848157-63848176 MS.gene79941:CDS 45.0%
GATACATAGTTGATCCAGGC+GGG + chr4.3:63848895-63848914 None:intergenic 45.0%
GATCGTTTGAATCTGGCTGT+GGG + chr4.3:63847356-63847375 None:intergenic 45.0%
GCATAAGAGGCAGCAACTTA+GGG - chr4.3:63848043-63848062 MS.gene79941:CDS 45.0%
GCATAAGGATTGTATGGAGG+AGG + chr4.3:63848866-63848885 None:intergenic 45.0%
GCATTATAGTAAGGTGGAGG+AGG + chr4.3:63849157-63849176 None:intergenic 45.0%
GGAACCGACAAAGATCAATC+AGG - chr4.3:63847282-63847301 MS.gene79941:CDS 45.0%
GGAGCATAAGGATTGTATGG+AGG + chr4.3:63848869-63848888 None:intergenic 45.0%
GGAGGATACATAGTTGATCC+AGG + chr4.3:63848899-63848918 None:intergenic 45.0%
GGAGGATATCCATAAGATGC+AGG + chr4.3:63849139-63849158 None:intergenic 45.0%
GGATACATAGTTGATCCAGG+CGG + chr4.3:63848896-63848915 None:intergenic 45.0%
GGATTGTATGGAGGAGGAAT+AGG + chr4.3:63848860-63848879 None:intergenic 45.0%
GTACACCACAAGCTGGATTA+GGG - chr4.3:63848399-63848418 MS.gene79941:CDS 45.0%
GTGTTCCCATACATGTTGGT+CGG + chr4.3:63849079-63849098 None:intergenic 45.0%
GTTTCGGGATTATCGTTGAG+CGG + chr4.3:63847144-63847163 None:intergenic 45.0%
TACCCCGGATACTCTTTCAT+CGG + chr4.3:63847765-63847784 None:intergenic 45.0%
TACTCAGAAGAGGATGGAGA+AGG - chr4.3:63847821-63847840 MS.gene79941:CDS 45.0%
TATGCCTCCTCCTAACTCAT+CGG - chr4.3:63849321-63849340 MS.gene79941:CDS 45.0%
TCCGCCTGATTGATCTTTGT+CGG + chr4.3:63847289-63847308 None:intergenic 45.0%
TGATCGTTTGAATCTGGCTG+TGG + chr4.3:63847357-63847376 None:intergenic 45.0%
TGCAAATCCTCATTCTCCGA+CGG + chr4.3:63847930-63847949 None:intergenic 45.0%
TGGGCTTATTATTGGGCCTA+GGG - chr4.3:63847794-63847813 MS.gene79941:CDS 45.0%
TGGTGCGAAGATTGTGATTC+GGG - chr4.3:63847848-63847867 MS.gene79941:CDS 45.0%
TTAAACGTCGAAGTCCTCGT+AGG + chr4.3:63848152-63848171 None:intergenic 45.0%
TTATTATCAGACTGCACCCC+AGG + chr4.3:63849037-63849056 None:intergenic 45.0%
TTGGGCTTATTATTGGGCCT+AGG - chr4.3:63847793-63847812 MS.gene79941:CDS 45.0%
TTGTATGGAGGAGGAATAGG+AGG + chr4.3:63848857-63848876 None:intergenic 45.0%
! AAACCGTTTTCGGAGAGAAG+TGG + chr4.3:63847240-63847259 None:intergenic 45.0%
! AATTTCTTGGCTGAGTTGGG+TGG - chr4.3:63848272-63848291 MS.gene79941:CDS 45.0%
! AGAAGTGGATTTGGAATCGG+TGG + chr4.3:63847225-63847244 None:intergenic 45.0%
! ATAGGTTGACCATGCATAGG+AGG + chr4.3:63848917-63848936 None:intergenic 45.0%
! CTGTACCGACCAACATGTAT+GGG - chr4.3:63849071-63849090 MS.gene79941:CDS 45.0%
! GGAGGAGCATAAGGATTGTA+TGG + chr4.3:63848872-63848891 None:intergenic 45.0%
! GGATTTCCTTTTCTTCGTCC+CGG + chr4.3:63847397-63847416 None:intergenic 45.0%
! GGATTTGAAACCTGATCCGT+CGG - chr4.3:63847911-63847930 MS.gene79941:CDS 45.0%
! GTTTGTAAGCATTGTGGGGA+TGG - chr4.3:63848182-63848201 MS.gene79941:CDS 45.0%
! TACACCACAAGCTGGATTAG+GGG - chr4.3:63848400-63848419 MS.gene79941:CDS 45.0%
! TCTGTACCGACCAACATGTA+TGG - chr4.3:63849070-63849089 MS.gene79941:CDS 45.0%
! TGAACACCATAAGGAGGCAT+AGG + chr4.3:63848935-63848954 None:intergenic 45.0%
! TTCTGGAAGCAATCCTCCTT+GGG - chr4.3:63848352-63848371 MS.gene79941:CDS 45.0%
!! AGCTTCTTCTGAAGCTTTGG+TGG + chr4.3:63847735-63847754 None:intergenic 45.0%
!! CTGGCTTTGAACAGGATAAG+TGG + chr4.3:63848738-63848757 None:intergenic 45.0%
!! CTGTGTGATTGGTCTGAAGT+AGG + chr4.3:63849208-63849227 None:intergenic 45.0%
!! GCTAACAATACTGGTTCAGC+TGG - chr4.3:63848374-63848393 MS.gene79941:CDS 45.0%
!! GGGTATTGAACACCATAAGG+AGG + chr4.3:63848941-63848960 None:intergenic 45.0%
!! GGTGGGTATTGAACACCATA+AGG + chr4.3:63848944-63848963 None:intergenic 45.0%
!! GTGTGATTGGTCTGAAGTAG+GGG + chr4.3:63849206-63849225 None:intergenic 45.0%
!! TACCGATGAAAGAGTATCCG+GGG - chr4.3:63847760-63847779 MS.gene79941:CDS 45.0%
!! TGGACGTGAATCGGTGTTAT+CGG + chr4.3:63847205-63847224 None:intergenic 45.0%
!!! GATGCCGTTTTGGGGAATTA+GGG + chr4.3:63847166-63847185 None:intergenic 45.0%
!!! TGATGCCGTTTTGGGGAATT+AGG + chr4.3:63847167-63847186 None:intergenic 45.0%
!!! TGTTTTGGTTGAGGCGGATA+CGG - chr4.3:63847950-63847969 MS.gene79941:CDS 45.0%
AAGAGGATGGAGAAGGAGAC+TGG - chr4.3:63847828-63847847 MS.gene79941:CDS 50.0%
AAGGGTCGGTGAAAGAAGGT+AGG - chr4.3:63847874-63847893 MS.gene79941:CDS 50.0%
ACAGCATTGCAAATGCGCCT+TGG - chr4.3:63849224-63849243 MS.gene79941:CDS 50.0%
ACCACCGCCGGTATATTGTT+GGG + chr4.3:63848780-63848799 None:intergenic 50.0%
ATCGTTGAGCGGTGGTTGAT+TGG + chr4.3:63847133-63847152 None:intergenic 50.0%
ATGCAGCAGAATTACCCTCC+TGG - chr4.3:63849016-63849035 MS.gene79941:CDS 50.0%
ATGGATAGGCACCAATTGGC+TGG + chr4.3:63848757-63848776 None:intergenic 50.0%
CAGCATTGCAAATGCGCCTT+GGG - chr4.3:63849225-63849244 MS.gene79941:CDS 50.0%
CATGAATGGCTATCGCCTTG+AGG - chr4.3:63848634-63848653 MS.gene79941:CDS 50.0%
CCAGTATTGTTAGCCCAAGG+AGG + chr4.3:63848368-63848387 None:intergenic 50.0%
CCATCCCAACAATATACCGG+CGG - chr4.3:63848773-63848792 MS.gene79941:CDS 50.0%
CCTCCTTGGGCTAACAATAC+TGG - chr4.3:63848365-63848384 MS.gene79941:CDS 50.0%
CCTGTTCAAAGCCAGCCAAT+TGG - chr4.3:63848743-63848762 MS.gene79941:CDS 50.0%
CTAGGGGGAATACTCAGAAG+AGG - chr4.3:63847811-63847830 MS.gene79941:CDS 50.0%
CTCAAGGCGATAGCCATTCA+TGG + chr4.3:63848636-63848655 None:intergenic 50.0%
CTCTTCTGAGTATTCCCCCT+AGG + chr4.3:63847813-63847832 None:intergenic 50.0%
CTGCAATAGTTCGACCCTCA+AGG + chr4.3:63848652-63848671 None:intergenic 50.0%
GAGGCACATTTCCAATGCTC+TGG + chr4.3:63849297-63849316 None:intergenic 50.0%
GATTGATCTGCAGACGAAGG+AGG + chr4.3:63849274-63849293 None:intergenic 50.0%
GCAGATCAATCCCAGAGCAT+TGG - chr4.3:63849283-63849302 MS.gene79941:CDS 50.0%
GGCTTATTATTGGGCCTAGG+GGG - chr4.3:63847796-63847815 MS.gene79941:CDS 50.0%
GGGCTTATTATTGGGCCTAG+GGG - chr4.3:63847795-63847814 MS.gene79941:CDS 50.0%
GGGGAATACTCAGAAGAGGA+TGG - chr4.3:63847815-63847834 MS.gene79941:CDS 50.0%
GGTAAAGGGTCGGTGAAAGA+AGG - chr4.3:63847870-63847889 MS.gene79941:CDS 50.0%
GGTCAACCTATGCCTCCTTA+TGG - chr4.3:63848926-63848945 MS.gene79941:CDS 50.0%
GGTGCGAAGATTGTGATTCG+GGG - chr4.3:63847849-63847868 MS.gene79941:CDS 50.0%
GGTGGTCTATAATCAGCAGG+TGG + chr4.3:63847717-63847736 None:intergenic 50.0%
GTATTTGCCACCCACTCTTG+AGG - chr4.3:63848469-63848488 MS.gene79941:CDS 50.0%
TACATAGTTGATCCAGGCGG+GGG + chr4.3:63848893-63848912 None:intergenic 50.0%
TAGGACACGCATACTGACGA+TGG + chr4.3:63848133-63848152 None:intergenic 50.0%
TCAGCAGGTGGCTTAAAAGC+AGG + chr4.3:63847705-63847724 None:intergenic 50.0%
TCCGAAAACGGTTTAACCGG+CGG - chr4.3:63847246-63847265 MS.gene79941:CDS 50.0%
TCGGCGGAAAAGACGTCATA+TGG - chr4.3:63849340-63849359 MS.gene79941:CDS 50.0%
TGCAGCAGAATTACCCTCCT+GGG - chr4.3:63849017-63849036 MS.gene79941:CDS 50.0%
TGCTGCATTTCACCAGAAGC+CGG + chr4.3:63849004-63849023 None:intergenic 50.0%
TGGAATCGGTGGACGTGAAT+CGG + chr4.3:63847214-63847233 None:intergenic 50.0%
TGGGATGGATAGGCACCAAT+TGG + chr4.3:63848761-63848780 None:intergenic 50.0%
TGGGATTGATCTGCAGACGA+AGG + chr4.3:63849277-63849296 None:intergenic 50.0%
! GATGAGTTAGGAGGAGGCAT+AGG + chr4.3:63849322-63849341 None:intergenic 50.0%
! GGCATAGGTTGACCATGCAT+AGG + chr4.3:63848920-63848939 None:intergenic 50.0%
! GTCTTTTCCGCCGATGAGTT+AGG + chr4.3:63849334-63849353 None:intergenic 50.0%
! TGTAAGCATTGTGGGGATGG+TGG - chr4.3:63848185-63848204 MS.gene79941:CDS 50.0%
! TGTGATTCGGGGTAAAGGGT+CGG - chr4.3:63847860-63847879 MS.gene79941:CDS 50.0%
! TTTCCTTTTCTTCGTCCCGG+TGG + chr4.3:63847394-63847413 None:intergenic 50.0%
! TTTTCCGCCGATGAGTTAGG+AGG + chr4.3:63849331-63849350 None:intergenic 50.0%
!! ACGTGAATCGGTGTTATCGG+TGG + chr4.3:63847202-63847221 None:intergenic 50.0%
!! ATCTTTGTCGGTTCCGCTTC+GGG + chr4.3:63847277-63847296 None:intergenic 50.0%
!! CCAATTGGCTGGCTTTGAAC+AGG + chr4.3:63848746-63848765 None:intergenic 50.0%
!! GATCTTTGTCGGTTCCGCTT+CGG + chr4.3:63847278-63847297 None:intergenic 50.0%
!! GTTCTGGAAGCAATCCTCCT+TGG - chr4.3:63848351-63848370 MS.gene79941:CDS 50.0%
!! TGAATCGGTGTTATCGGTGG+TGG + chr4.3:63847199-63847218 None:intergenic 50.0%
AATCTGGCTGTGGGTCCCAT+CGG + chr4.3:63847347-63847366 None:intergenic 55.0%
ACCTGATCCGTCGGAGAATG+AGG - chr4.3:63847920-63847939 MS.gene79941:CDS 55.0%
AGGTGGGGCGGAATGATTAC+TGG + chr4.3:63849251-63849270 None:intergenic 55.0%
AGTGCTCCTCCTGGGAGTTA+TGG - chr4.3:63848809-63848828 MS.gene79941:CDS 55.0%
CAATACCCACCCATGCCTAC+AGG - chr4.3:63848953-63848972 MS.gene79941:CDS 55.0%
CCACCCACTCTTGAGGATGA+TGG - chr4.3:63848476-63848495 MS.gene79941:CDS 55.0%
CCATCATCCTCAAGAGTGGG+TGG + chr4.3:63848479-63848498 None:intergenic 55.0%
CCGCCGGTATATTGTTGGGA+TGG + chr4.3:63848776-63848795 None:intergenic 55.0%
CTGCATTTCACCAGAAGCCG+GGG + chr4.3:63849002-63849021 None:intergenic 55.0%
GAAGGAGATCTAGCCCCTTC+AGG + chr4.3:63847567-63847586 None:intergenic 55.0%
GACCACCGCCGGTATATTGT+TGG + chr4.3:63848781-63848800 None:intergenic 55.0%
GAGGAATAGGAGGTCCCCAT+GGG + chr4.3:63848847-63848866 None:intergenic 55.0%
GCAGCAACTTAGGGAGCTTG+CGG - chr4.3:63848052-63848071 MS.gene79941:CDS 55.0%
GCAGCAGAATTACCCTCCTG+GGG - chr4.3:63849018-63849037 MS.gene79941:CDS 55.0%
GCGGAATGATTACTGGCCCA+AGG + chr4.3:63849244-63849263 None:intergenic 55.0%
GCTATTGCAGCCTGTGGATG+AGG - chr4.3:63848010-63848029 MS.gene79941:CDS 55.0%
GCTGCATTTCACCAGAAGCC+GGG + chr4.3:63849003-63849022 None:intergenic 55.0%
GCTGGTAGTACACCACAAGC+TGG - chr4.3:63848392-63848411 MS.gene79941:CDS 55.0%
GGAGAAGCTATTGCAGCCTG+TGG - chr4.3:63848004-63848023 MS.gene79941:CDS 55.0%
GTACCTCCATAACTCCCAGG+AGG + chr4.3:63848818-63848837 None:intergenic 55.0%
GTCAGTATGCGTGTCCTACG+AGG - chr4.3:63848135-63848154 MS.gene79941:CDS 55.0%
TATCAGACTGCACCCCAGGA+GGG + chr4.3:63849033-63849052 None:intergenic 55.0%
TCCCAACAATATACCGGCGG+TGG - chr4.3:63848776-63848795 MS.gene79941:CDS 55.0%
TCCTCATTCTCCGACGGATC+AGG + chr4.3:63847924-63847943 None:intergenic 55.0%
TCGGGATTATCGTTGAGCGG+TGG + chr4.3:63847141-63847160 None:intergenic 55.0%
TGATCTGCAGACGAAGGAGG+AGG + chr4.3:63849271-63849290 None:intergenic 55.0%
TGCATTTCACCAGAAGCCGG+GGG + chr4.3:63849001-63849020 None:intergenic 55.0%
TTATCAGACTGCACCCCAGG+AGG + chr4.3:63849034-63849053 None:intergenic 55.0%
TTCCCAGTAGCACCCTTCAC+CGG + chr4.3:63848230-63848249 None:intergenic 55.0%
! AGGGGCTGGTGCGGTTAAAA+AGG - chr4.3:63848418-63848437 MS.gene79941:CDS 55.0%
! GAGTTAGGAGGAGGCATAGG+TGG + chr4.3:63849319-63849338 None:intergenic 55.0%
! GGAGTACCTCCATAACTCCC+AGG + chr4.3:63848821-63848840 None:intergenic 55.0%
! GGATATGTTGGTGGAGCTGC+TGG + chr4.3:63849118-63849137 None:intergenic 55.0%
! GGCTGATGACGAACCGAAAC+CGG - chr4.3:63847422-63847441 MS.gene79941:CDS 55.0%
! TATGTTGGTGGAGCTGCTGG+TGG + chr4.3:63849115-63849134 None:intergenic 55.0%
! TTAGGAGGAGGCATAGGTGG+AGG + chr4.3:63849316-63849335 None:intergenic 55.0%
!! AGGGAGCTTGCGGCTTTGAA+TGG - chr4.3:63848062-63848081 MS.gene79941:CDS 55.0%
!! ATCGGTGTTATCGGTGGTGG+TGG + chr4.3:63847196-63847215 None:intergenic 55.0%
!! ATGGAGGTACTCCTGTCCCA+TGG - chr4.3:63848828-63848847 MS.gene79941:CDS 55.0%
!! GATTGGTCTGAAGTAGGGGC+AGG + chr4.3:63849202-63849221 None:intergenic 55.0%
!! GCAATTGGTTCGGGCAGTTC+TGG - chr4.3:63848335-63848354 MS.gene79941:CDS 55.0%
!! GCCGCCGGTTAAACCGTTTT+CGG + chr4.3:63847250-63847269 None:intergenic 55.0%
!! GGGAGCTTGCGGCTTTGAAT+GGG - chr4.3:63848063-63848082 MS.gene79941:CDS 55.0%
!! GGGTGCTACTGGGAAGAAGA+TGG - chr4.3:63848235-63848254 MS.gene79941:CDS 55.0%
!! TGGAGGTACTCCTGTCCCAT+GGG - chr4.3:63848829-63848848 MS.gene79941:CDS 55.0%
!!! GGTGCCGTTGATGCCGTTTT+GGG + chr4.3:63847175-63847194 None:intergenic 55.0%
!!! GTGCCGTTGATGCCGTTTTG+GGG + chr4.3:63847174-63847193 None:intergenic 55.0%
!!! TGGTGCCGTTGATGCCGTTT+TGG + chr4.3:63847176-63847195 None:intergenic 55.0%
AACGACGCCGTAGAAGCCGA+TGG - chr4.3:63847328-63847347 MS.gene79941:CDS 60.0%
ACCTCCAGGACCACCTGCAT+CGG - chr4.3:63848706-63848725 MS.gene79941:CDS 60.0%
ACGACGCCGTAGAAGCCGAT+GGG - chr4.3:63847329-63847348 MS.gene79941:CDS 60.0%
ATACCGGCGGTGGTCCCATT+GGG - chr4.3:63848786-63848805 MS.gene79941:CDS 60.0%
ATAGGAGGTCCCCATGGGAC+AGG + chr4.3:63848842-63848861 None:intergenic 60.0%
ATAGTTGATCCAGGCGGGGG+AGG + chr4.3:63848890-63848909 None:intergenic 60.0%
ATTTCACCAGAAGCCGGGGG+TGG + chr4.3:63848998-63849017 None:intergenic 60.0%
CACGCATACTGACGATGGCC+AGG + chr4.3:63848128-63848147 None:intergenic 60.0%
CCAGCCCCTAATCCAGCTTG+TGG + chr4.3:63848407-63848426 None:intergenic 60.0%
CCTCAGCCTGTTGTACCTCC+AGG - chr4.3:63848692-63848711 MS.gene79941:CDS 60.0%
CGGTTCGTCATCAGCCCATC+TGG + chr4.3:63847418-63847437 None:intergenic 60.0%
CTGCAGACGAAGGAGGAGGT+GGG + chr4.3:63849267-63849286 None:intergenic 60.0%
GCCTCCTCCTAACTCATCGG+CGG - chr4.3:63849324-63849343 MS.gene79941:CDS 60.0%
GCTCCTCCTGGGAGTTATGG+AGG - chr4.3:63848812-63848831 MS.gene79941:CDS 60.0%
GGAGGAATAGGAGGTCCCCA+TGG + chr4.3:63848848-63848867 None:intergenic 60.0%
GGATACGGCTGATGCGCTTG+AGG - chr4.3:63847965-63847984 MS.gene79941:CDS 60.0%
TAAGTGGGCACAGCCGATGC+AGG + chr4.3:63848722-63848741 None:intergenic 60.0%
TATACCGGCGGTGGTCCCAT+TGG - chr4.3:63848785-63848804 MS.gene79941:CDS 60.0%
TCCGCCGATGAGTTAGGAGG+AGG + chr4.3:63849328-63849347 None:intergenic 60.0%
TCTGCAGACGAAGGAGGAGG+TGG + chr4.3:63849268-63849287 None:intergenic 60.0%
TGCAGACGAAGGAGGAGGTG+GGG + chr4.3:63849266-63849285 None:intergenic 60.0%
TGTAGGTTGTGCGGTGAGCC+TGG - chr4.3:63848107-63848126 MS.gene79941:CDS 60.0%
TTTCACCAGAAGCCGGGGGT+GGG + chr4.3:63848997-63849016 None:intergenic 60.0%
! AGCTGGATTAGGGGCTGGTG+CGG - chr4.3:63848409-63848428 MS.gene79941:CDS 60.0%
! CCACAAGCTGGATTAGGGGC+TGG - chr4.3:63848404-63848423 MS.gene79941:CDS 60.0%
! CCTGGAGGTACAACAGGCTG+AGG + chr4.3:63848695-63848714 None:intergenic 60.0%
! CCTTTTCTTCGTCCCGGTGG+CGG + chr4.3:63847391-63847410 None:intergenic 60.0%
! GGAGCTGCTGGTGGCATTGA+AGG + chr4.3:63849106-63849125 None:intergenic 60.0%
! GGAGGTACAACAGGCTGAGG+AGG + chr4.3:63848692-63848711 None:intergenic 60.0%
! GGTCTGAAGTAGGGGCAGGA+GGG + chr4.3:63849198-63849217 None:intergenic 60.0%
! GGTGGTCCTGGAGGTACAAC+AGG + chr4.3:63848701-63848720 None:intergenic 60.0%
! GTCTGAAGTAGGGGCAGGAG+GGG + chr4.3:63849197-63849216 None:intergenic 60.0%
! TCTGAAGTAGGGGCAGGAGG+GGG + chr4.3:63849196-63849215 None:intergenic 60.0%
! TGGTCTGAAGTAGGGGCAGG+AGG + chr4.3:63849199-63849218 None:intergenic 60.0%
!! CCAGGAGGAGCACTCCCAAT+GGG + chr4.3:63848803-63848822 None:intergenic 60.0%
!! CCATTGGGAGTGCTCCTCCT+GGG - chr4.3:63848801-63848820 MS.gene79941:CDS 60.0%
!! GAGAGTATCGTGCTCGCGAG+AGG - chr4.3:63847631-63847650 MS.gene79941:CDS 60.0%
!! GGAGGTACTCCTGTCCCATG+GGG - chr4.3:63848830-63848849 MS.gene79941:CDS 60.0%
!! GTCCGGTGAAGGGTGCTACT+GGG - chr4.3:63848225-63848244 MS.gene79941:CDS 60.0%
!! GTGGGTCCCATCGGCTTCTA+CGG + chr4.3:63847338-63847357 None:intergenic 60.0%
!! TGTCCGGTGAAGGGTGCTAC+TGG - chr4.3:63848224-63848243 MS.gene79941:CDS 60.0%
ACAGCCGATGCAGGTGGTCC+TGG + chr4.3:63848713-63848732 None:intergenic 65.0%
ACCAGGGGGACCTGTAGGCA+TGG + chr4.3:63848966-63848985 None:intergenic 65.0%
ACTCCCAATGGGACCACCGC+CGG + chr4.3:63848792-63848811 None:intergenic 65.0%
AGACGAAGGAGGAGGTGGGG+CGG + chr4.3:63849263-63849282 None:intergenic 65.0%
CCAGGGGGACCTGTAGGCAT+GGG + chr4.3:63848965-63848984 None:intergenic 65.0%
CCGCCACCGGGACGAAGAAA+AGG - chr4.3:63847388-63847407 MS.gene79941:CDS 65.0%
GCTTGAGGCTGCGGCTGGTA+TGG - chr4.3:63847980-63847999 MS.gene79941:CDS 65.0%
GGCTGATGCGCTTGAGGCTG+CGG - chr4.3:63847971-63847990 MS.gene79941:CDS 65.0%
GGGGACCTGTAGGCATGGGT+GGG + chr4.3:63848961-63848980 None:intergenic 65.0%
TGAGGCTGCGGCTGGTATGG+TGG - chr4.3:63847983-63848002 MS.gene79941:CDS 65.0%
TTCACCAGAAGCCGGGGGTG+GGG + chr4.3:63848996-63849015 None:intergenic 65.0%
!! CCCAGGAGGAGCACTCCCAA+TGG + chr4.3:63848804-63848823 None:intergenic 65.0%
!! CCCATTGGGAGTGCTCCTCC+TGG - chr4.3:63848800-63848819 MS.gene79941:CDS 65.0%
ACCGGCGGCAACACCCGAAG+CGG - chr4.3:63847261-63847280 MS.gene79941:CDS 70.0%
AGAACGGCGAAGCCGCCACC+GGG - chr4.3:63847376-63847395 MS.gene79941:CDS 70.0%
CAGAACGGCGAAGCCGCCAC+CGG - chr4.3:63847375-63847394 MS.gene79941:CDS 70.0%
CCCATGCCTACAGGTCCCCC+TGG - chr4.3:63848962-63848981 MS.gene79941:CDS 70.0%
CCTTATGCTCCTCCCCCGCC+TGG - chr4.3:63848878-63848897 MS.gene79941:CDS 70.0%
GAAGTAGGGGCAGGAGGGGG+AGG + chr4.3:63849193-63849212 None:intergenic 70.0%
GATGCGCTTGAGGCTGCGGC+TGG - chr4.3:63847975-63847994 MS.gene79941:CDS 70.0%
GCCGATGCAGGTGGTCCTGG+AGG + chr4.3:63848710-63848729 None:intergenic 70.0%
GGGGGACCTGTAGGCATGGG+TGG + chr4.3:63848962-63848981 None:intergenic 70.0%
GTGGCACCAGGGGGACCTGT+AGG + chr4.3:63848971-63848990 None:intergenic 70.0%
GTGGGCACAGCCGATGCAGG+TGG + chr4.3:63848719-63848738 None:intergenic 70.0%
TCACCAGAAGCCGGGGGTGG+GGG + chr4.3:63848995-63849014 None:intergenic 70.0%
! CCAGGCGGGGGAGGAGCATA+AGG + chr4.3:63848881-63848900 None:intergenic 70.0%
! TCCGCTTCGGGTGTTGCCGC+CGG + chr4.3:63847265-63847284 None:intergenic 70.0%
ACTCCCCCACCCCCGGCTTC+TGG - chr4.3:63848989-63849008 MS.gene79941:CDS 75.0%
AGAAGCCGGGGGTGGGGGAG+TGG + chr4.3:63848990-63849009 None:intergenic 75.0%
GGGGTGGGGGAGTGGCACCA+GGG + chr4.3:63848982-63849001 None:intergenic 75.0%
GGGTGGGGGAGTGGCACCAG+GGG + chr4.3:63848981-63849000 None:intergenic 75.0%
GGTGGGGGAGTGGCACCAGG+GGG + chr4.3:63848980-63848999 None:intergenic 75.0%
GTAGGGGCAGGAGGGGGAGG+TGG + chr4.3:63849190-63849209 None:intergenic 75.0%
! GCAGGAGGGGGAGGTGGTGG+AGG + chr4.3:63849184-63849203 None:intergenic 75.0%
!! TGGTGCCACTCCCCCACCCC+CGG - chr4.3:63848982-63849001 MS.gene79941:CDS 75.0%
! GGGGCAGGAGGGGGAGGTGG+TGG + chr4.3:63849187-63849206 None:intergenic 80.0%
! GGGGGTGGGGGAGTGGCACC+AGG + chr4.3:63848983-63849002 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 63847114 63849405 63847114 ID=MS.gene79941
chr4.3 mRNA 63847114 63849405 63847114 ID=MS.gene79941.t1;Parent=MS.gene79941
chr4.3 exon 63847114 63849405 63847114 ID=MS.gene79941.t1.exon1;Parent=MS.gene79941.t1
chr4.3 CDS 63847114 63849405 63847114 ID=cds.MS.gene79941.t1;Parent=MS.gene79941.t1
Gene Sequence

>MS.gene79941

ATGGAGGCTCTCGATTCCAATCAACCACCGCTCAACGATAATCCCGAAACCCTAATTCCCCAAAACGGCATCAACGGCACCACCACCACCGATAACACCGATTCACGTCCACCGATTCCAAATCCACTTCTCTCCGAAAACGGTTTAACCGGCGGCAACACCCGAAGCGGAACCGACAAAGATCAATCAGGCGGAGAAGAAGAAACAACAAGCAAACGACGCCGTAGAAGCCGATGGGACCCACAGCCAGATTCAAACGATCAGAACGGCGAAGCCGCCACCGGGACGAAGAAAAGGAAATCCAGATGGGCTGATGACGAACCGAAACCGGTAATTCAACTTCCTGATTTCATGGGTGGTATTGAATTCGATCCTGAAATTCAAACATTGAATAGTAGATTGCTTGAGATAAGTAGAATGTTGCAATCTGGTTTGCCTTTAGATGATCGTCCTGAAGGGGCTAGATCTCCTTCACCTGAACCTATATATGATAACATGGGGATTAGGATTAATACTCGAGAGTATCGTGCTCGCGAGAGGTTTCAGAAAGAGAGACAAGAGATTATTTCTCAGATTATTAAGAAAAATCCTGCTTTTAAGCCACCTGCTGATTATAGACCACCAAAGCTTCAGAAGAAGCTTTATATACCGATGAAAGAGTATCCGGGGTATAATTTTATTGGGCTTATTATTGGGCCTAGGGGGAATACTCAGAAGAGGATGGAGAAGGAGACTGGTGCGAAGATTGTGATTCGGGGTAAAGGGTCGGTGAAAGAAGGTAGGTTGCAACAGAAGAGGGATTTGAAACCTGATCCGTCGGAGAATGAGGATTTGCATGTTTTGGTTGAGGCGGATACGGCTGATGCGCTTGAGGCTGCGGCTGGTATGGTGGAGAAGCTATTGCAGCCTGTGGATGAGGTTTTGAATGAGCATAAGAGGCAGCAACTTAGGGAGCTTGCGGCTTTGAATGGGACGATTAGAGATGAAGAGTATTGTAGGTTGTGCGGTGAGCCTGGCCATCGTCAGTATGCGTGTCCTACGAGGACTTCGACGTTTAAGAGTGAGGTTGTTTGTAAGCATTGTGGGGATGGTGGTCATCCTAGTATTGATTGTCCGGTGAAGGGTGCTACTGGGAAGAAGATGGATGATGAGTATCAGAATTTCTTGGCTGAGTTGGGTGGTACTGTTCCTGAATCTGCGATTAAGACTACTAGTACTTTGGCAATTGGTTCGGGCAGTTCTGGAAGCAATCCTCCTTGGGCTAACAATACTGGTTCAGCTGGTAGTACACCACAAGCTGGATTAGGGGCTGGTGCGGTTAAAAAGGAAATTGATGATACAAATCTGTACATTGGGTATTTGCCACCCACTCTTGAGGATGATGGTTTGATCCAATTGTTTCAACAATTTGGTGAGATTGTTATGGCAAAAGTTATTAAGGATCGAATGACAGGTTTGAGTAAAGGATACGGGTTTGTGAAGTATGCTGATATCACAATGGCAAACAATGCAATTGTTGCCATGAATGGCTATCGCCTTGAGGGTCGAACTATTGCAGTAAGAGTTGCTGGTAAGCCTCCTCAGCCTGTTGTACCTCCAGGACCACCTGCATCGGCTGTGCCCACTTATCCTGTTCAAAGCCAGCCAATTGGTGCCTATCCATCCCAACAATATACCGGCGGTGGTCCCATTGGGAGTGCTCCTCCTGGGAGTTATGGAGGTACTCCTGTCCCATGGGGACCTCCTATTCCTCCTCCATACAATCCTTATGCTCCTCCCCCGCCTGGATCAACTATGTATCCTCCTATGCATGGTCAACCTATGCCTCCTTATGGTGTTCAATACCCACCCATGCCTACAGGTCCCCCTGGTGCCACTCCCCCACCCCCGGCTTCTGGTGAAATGCAGCAGAATTACCCTCCTGGGGTGCAGTCTGATAATAATTCATCTACTCAATCTGTACCGACCAACATGTATGGGAACACAATGCCTTCAATGCCACCAGCAGCTCCACCAACATATCCTGCATCTTATGGATATCCTCCTCCACCTTACTATAATGCAGTTCCTCCACCACCTCCCCCTCCTGCCCCTACTTCAGACCAATCACACAGCATTGCAAATGCGCCTTGGGCCAGTAATCATTCCGCCCCACCTCCTCCTTCGTCTGCAGATCAATCCCAGAGCATTGGAAATGTGCCTCCACCTATGCCTCCTCCTAACTCATCGGCGGAAAAGACGTCATATGGAGCTGATTCTGAGTATGAGAAATTCATGGCAGAGATGAAATGA
Protein sequence

>MS.gene79941.t1

MEALDSNQPPLNDNPETLIPQNGINGTTTTDNTDSRPPIPNPLLSENGLTGGNTRSGTDKDQSGGEEETTSKRRRRSRWDPQPDSNDQNGEAATGTKKRKSRWADDEPKPVIQLPDFMGGIEFDPEIQTLNSRLLEISRMLQSGLPLDDRPEGARSPSPEPIYDNMGIRINTREYRARERFQKERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHVLVEADTADALEAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPTRTSTFKSEVVCKHCGDGGHPSIDCPVKGATGKKMDDEYQNFLAELGGTVPESAIKTTSTLAIGSGSSGSNPPWANNTGSAGSTPQAGLGAGAVKKEIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIVAMNGYRLEGRTIAVRVAGKPPQPVVPPGPPASAVPTYPVQSQPIGAYPSQQYTGGGPIGSAPPGSYGGTPVPWGPPIPPPYNPYAPPPPGSTMYPPMHGQPMPPYGVQYPPMPTGPPGATPPPPASGEMQQNYPPGVQSDNNSSTQSVPTNMYGNTMPSMPPAAPPTYPASYGYPPPPYYNAVPPPPPPPAPTSDQSHSIANAPWASNHSAPPPPSSADQSQSIGNVPPPMPPPNSSAEKTSYGADSEYEKFMAEMK