Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80883.t1 | AES98175.2 | 42.5 | 440 | 198 | 12 | 1 | 425 | 1 | 400 | 5.70E-73 | 285.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80883.t1 | G7KBE0 | 42.5 | 440 | 198 | 12 | 1 | 425 | 1 | 400 | 4.1e-73 | 285.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052065 | MS.gene80883 | 0.811905 | 5.54E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80883.t1 | MTR_5g065250 | 42.518 | 421 | 196 | 11 | 13 | 425 | 18 | 400 | 2.25e-87 | 284 |
| MS.gene80883.t1 | MTR_2g103400 | 41.121 | 321 | 134 | 3 | 66 | 371 | 6 | 286 | 1.23e-64 | 220 |
| MS.gene80883.t1 | MTR_4g061950 | 43.836 | 292 | 136 | 7 | 13 | 297 | 18 | 288 | 9.07e-64 | 211 |
| MS.gene80883.t1 | MTR_1g033680 | 37.970 | 266 | 155 | 4 | 78 | 341 | 4 | 261 | 2.19e-51 | 186 |
| MS.gene80883.t1 | MTR_7g108440 | 38.023 | 263 | 156 | 2 | 46 | 306 | 17 | 274 | 9.18e-50 | 184 |
| MS.gene80883.t1 | MTR_5g055560 | 31.054 | 351 | 135 | 7 | 52 | 354 | 21 | 312 | 1.23e-38 | 149 |
| MS.gene80883.t1 | MTR_1g024800 | 42.405 | 158 | 89 | 1 | 218 | 373 | 1 | 158 | 2.79e-37 | 137 |
| MS.gene80883.t1 | MTR_8g470180 | 42.000 | 200 | 105 | 4 | 76 | 272 | 346 | 537 | 2.04e-35 | 140 |
| MS.gene80883.t1 | MTR_7g104745 | 37.824 | 193 | 107 | 3 | 102 | 287 | 48 | 234 | 2.15e-27 | 117 |
| MS.gene80883.t1 | MTR_4g036270 | 37.324 | 142 | 77 | 3 | 229 | 359 | 1 | 141 | 2.46e-23 | 100 |
| MS.gene80883.t1 | MTR_5g054710 | 32.663 | 199 | 100 | 4 | 116 | 314 | 15 | 179 | 3.01e-22 | 95.9 |
| MS.gene80883.t1 | MTR_5g041720 | 38.806 | 134 | 81 | 1 | 52 | 184 | 3 | 136 | 9.24e-19 | 87.0 |
| MS.gene80883.t1 | MTR_2g060030 | 24.437 | 311 | 200 | 7 | 44 | 331 | 174 | 472 | 1.02e-18 | 90.5 |
| MS.gene80883.t1 | MTR_0073s0040 | 26.816 | 179 | 128 | 2 | 196 | 374 | 66 | 241 | 9.98e-17 | 82.0 |
| MS.gene80883.t1 | MTR_1148s0010 | 23.179 | 302 | 220 | 3 | 50 | 351 | 13 | 302 | 1.98e-16 | 83.2 |
| MS.gene80883.t1 | MTR_0260s0020 | 50.000 | 74 | 36 | 1 | 58 | 131 | 27 | 99 | 2.68e-16 | 75.9 |
| MS.gene80883.t1 | MTR_6g061110 | 48.438 | 64 | 33 | 0 | 262 | 325 | 55 | 118 | 4.25e-15 | 75.9 |
| MS.gene80883.t1 | MTR_8g045280 | 27.320 | 194 | 131 | 2 | 140 | 328 | 322 | 510 | 7.93e-15 | 78.2 |
| MS.gene80883.t1 | MTR_5g053650 | 24.370 | 238 | 166 | 5 | 187 | 419 | 2 | 230 | 1.02e-13 | 73.6 |
| MS.gene80883.t1 | MTR_7g073570 | 51.667 | 60 | 29 | 0 | 262 | 321 | 1 | 60 | 6.22e-13 | 70.9 |
| MS.gene80883.t1 | MTR_4g027930 | 29.496 | 139 | 90 | 2 | 189 | 323 | 6 | 140 | 8.14e-13 | 68.6 |
| MS.gene80883.t1 | MTR_6g053340 | 34.146 | 123 | 69 | 2 | 242 | 352 | 135 | 257 | 8.61e-13 | 69.3 |
| MS.gene80883.t1 | MTR_5g073130 | 20.438 | 274 | 180 | 4 | 78 | 351 | 80 | 315 | 1.61e-12 | 69.7 |
| MS.gene80883.t1 | MTR_8g103960 | 29.861 | 144 | 83 | 3 | 264 | 404 | 2 | 130 | 2.26e-11 | 62.4 |
| MS.gene80883.t1 | MTR_7g083690 | 22.005 | 409 | 260 | 9 | 44 | 431 | 65 | 435 | 3.45e-11 | 66.6 |
| MS.gene80883.t1 | MTR_6g049090 | 56.863 | 51 | 22 | 0 | 63 | 113 | 27 | 77 | 4.79e-11 | 61.6 |
| MS.gene80883.t1 | MTR_4g005250 | 30.556 | 144 | 96 | 1 | 208 | 351 | 221 | 360 | 6.57e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTTCTTAATATTCAAAAA+TGG | - | 14601:11961-11980 | MS.gene80883:CDS | 15.0% |
| !!! | ATTTATTGATGATTGTGTTA+AGG | - | 14601:12175-12194 | MS.gene80883:CDS | 20.0% |
| ! | ATCAATAAATCCCAATCTAT+AGG | + | 14601:12165-12184 | MS.gene80883:intergenic | 25.0% |
| ! | TTGAAGATGATATTGAAGAA+GGG | - | 14601:12402-12421 | MS.gene80883:CDS | 25.0% |
| !! | GTTGAATTTGAAATGTTGAT+GGG | - | 14601:12629-12648 | MS.gene80883:CDS | 25.0% |
| !! | GTTTGAAACAAAAAAAGATG+TGG | + | 14601:11337-11356 | MS.gene80883:intergenic | 25.0% |
| !! | TTGAATTTGAAATGTTGATG+GGG | - | 14601:12630-12649 | MS.gene80883:CDS | 25.0% |
| !!! | GAATCTGTTTTTAAGAAGAT+TGG | - | 14601:12056-12075 | MS.gene80883:CDS | 25.0% |
| GTTGAAGATGATATTGAAGA+AGG | - | 14601:12401-12420 | MS.gene80883:CDS | 30.0% | |
| TGAAGATGATATTGAAGAAG+GGG | - | 14601:12403-12422 | MS.gene80883:CDS | 30.0% | |
| TGTTTATAATATTTGGGTGG+TGG | - | 14601:12214-12233 | MS.gene80883:CDS | 30.0% | |
| TTTCCTGATTCCTTTCATAT+GGG | - | 14601:11357-11376 | MS.gene80883:CDS | 30.0% | |
| ! | AAGGATGTTTTGTCAAAAGA+GGG | - | 14601:11660-11679 | MS.gene80883:CDS | 30.0% |
| ! | ATTTATGGCAGATTTTTGCA+AGG | - | 14601:11382-11401 | MS.gene80883:CDS | 30.0% |
| ! | GGTTGAATTTGAAATGTTGA+TGG | - | 14601:12628-12647 | MS.gene80883:CDS | 30.0% |
| ! | TAAGGATGTTTTGTCAAAAG+AGG | - | 14601:11659-11678 | MS.gene80883:CDS | 30.0% |
| ! | TATTGATGATTGTGTTAAGG+TGG | - | 14601:12178-12197 | MS.gene80883:CDS | 30.0% |
| !! | ATTTTAGAGAGAGAAAGTGA+GGG | - | 14601:11201-11220 | MS.gene80883:CDS | 30.0% |
| !! | TTTTTAAGAAGATTGGAGGA+AGG | - | 14601:12063-12082 | MS.gene80883:CDS | 30.0% |
| !!! | AGAGATAAAGGTGTTTTCTA+TGG | - | 14601:11854-11873 | MS.gene80883:CDS | 30.0% |
| !!! | GAGATAAAGGTGTTTTCTAT+GGG | - | 14601:11855-11874 | MS.gene80883:CDS | 30.0% |
| !!! | TCTGTTTTTAAGAAGATTGG+AGG | - | 14601:12059-12078 | MS.gene80883:CDS | 30.0% |
| AAAACGTCACCGGAAAAATA+CGG | - | 14601:12293-12312 | MS.gene80883:CDS | 35.0% | |
| AAACAGATTCCTCCCAAATA+TGG | + | 14601:12046-12065 | MS.gene80883:intergenic | 35.0% | |
| ACAAGAAGCTAGAGTACAAT+TGG | - | 14601:12502-12521 | MS.gene80883:CDS | 35.0% | |
| AGAACTTGGCTAAAGTTGTA+TGG | - | 14601:12011-12030 | MS.gene80883:CDS | 35.0% | |
| CCCTAAGAAAGTAGACAAAA+GGG | - | 14601:11431-11450 | MS.gene80883:CDS | 35.0% | |
| CCTAAGAAAGTAGACAAAAG+GGG | - | 14601:11432-11451 | MS.gene80883:CDS | 35.0% | |
| CTAAGAAAGTAGACAAAAGG+GGG | - | 14601:11433-11452 | MS.gene80883:CDS | 35.0% | |
| CTCATCTCTACCTATAGATT+GGG | - | 14601:12152-12171 | MS.gene80883:CDS | 35.0% | |
| CTCTGTTTACCAATGAGATT+AGG | + | 14601:11990-12009 | MS.gene80883:intergenic | 35.0% | |
| CTTTCCTGATTCCTTTCATA+TGG | - | 14601:11356-11375 | MS.gene80883:CDS | 35.0% | |
| GAAGGATGGTATTTCGTTTA+AGG | - | 14601:11641-11660 | MS.gene80883:CDS | 35.0% | |
| GGCTGTTTATAATATTTGGG+TGG | - | 14601:12211-12230 | MS.gene80883:CDS | 35.0% | |
| GGGGGCTGTTTATAATATTT+GGG | - | 14601:12208-12227 | MS.gene80883:CDS | 35.0% | |
| GTCTGAAGAATCTACTACAA+TGG | - | 14601:12865-12884 | MS.gene80883:CDS | 35.0% | |
| TCCCTAAGAAAGTAGACAAA+AGG | - | 14601:11430-11449 | MS.gene80883:CDS | 35.0% | |
| TCTCATCTCTACCTATAGAT+TGG | - | 14601:12151-12170 | MS.gene80883:CDS | 35.0% | |
| TGCAGTTCAAAATGTAAGCA+GGG | - | 14601:12776-12795 | MS.gene80883:CDS | 35.0% | |
| TGGGGGCTGTTTATAATATT+TGG | - | 14601:12207-12226 | MS.gene80883:CDS | 35.0% | |
| TTCAGAAGAAAAAACGTCAC+CGG | - | 14601:12283-12302 | MS.gene80883:CDS | 35.0% | |
| TTCCTGATTCCTTTCATATG+GGG | - | 14601:11358-11377 | MS.gene80883:CDS | 35.0% | |
| TTGGTAAACAGAGAAGAACT+TGG | - | 14601:11997-12016 | MS.gene80883:CDS | 35.0% | |
| ! | AGGATGTTTTGTCAAAAGAG+GGG | - | 14601:11661-11680 | MS.gene80883:CDS | 35.0% |
| ! | ATTGGAGGCTTTGATTTATG+AGG | - | 14601:12520-12539 | MS.gene80883:CDS | 35.0% |
| ! | CCCTTTTGTCTACTTTCTTA+GGG | + | 14601:11434-11453 | MS.gene80883:intergenic | 35.0% |
| ! | CTGTAAAATTTGAGATCCTG+AGG | + | 14601:12844-12863 | MS.gene80883:intergenic | 35.0% |
| !! | CATTCAAACTGGTTTGTTCA+TGG | - | 14601:11821-11840 | MS.gene80883:CDS | 35.0% |
| !! | GATTTTAGAGAGAGAAAGTG+AGG | - | 14601:11200-11219 | MS.gene80883:CDS | 35.0% |
| !! | GTTCTTGAGTAATGGTTTTG+TGG | - | 14601:11767-11786 | MS.gene80883:CDS | 35.0% |
| !! | TTTGCAAGGTTTGGTAATGT+TGG | - | 14601:11396-11415 | MS.gene80883:CDS | 35.0% |
| !! | TTTTAGAGAGAGAAAGTGAG+GGG | - | 14601:11202-11221 | MS.gene80883:CDS | 35.0% |
| AAATGGCTGCCTAATCTCAT+TGG | - | 14601:11978-11997 | MS.gene80883:CDS | 40.0% | |
| AAGAAGATTGGAGGAAGGTT+TGG | - | 14601:12068-12087 | MS.gene80883:CDS | 40.0% | |
| AAGTAGACAAAAGGGGGAAA+AGG | - | 14601:11439-11458 | MS.gene80883:CDS | 40.0% | |
| AGAAGCTAGAGTACAATTGG+AGG | - | 14601:12505-12524 | MS.gene80883:CDS | 40.0% | |
| AGAGAGTTCAAATGCAGCAA+AGG | - | 14601:11617-11636 | MS.gene80883:CDS | 40.0% | |
| AGATTCCTCCCAAATATGGA+GGG | + | 14601:12042-12061 | MS.gene80883:intergenic | 40.0% | |
| ATTCAAACTGAGAGAGGGAA+AGG | - | 14601:11255-11274 | MS.gene80883:CDS | 40.0% | |
| CAGTTCAAAATGTAAGCAGG+GGG | - | 14601:12778-12797 | MS.gene80883:CDS | 40.0% | |
| CCAGGACTTTGATGTTGATA+CGG | - | 14601:12097-12116 | MS.gene80883:CDS | 40.0% | |
| CCATAAATCCCCCATATGAA+AGG | + | 14601:11370-11389 | MS.gene80883:intergenic | 40.0% | |
| CCTTTCATATGGGGGATTTA+TGG | - | 14601:11367-11386 | MS.gene80883:CDS | 40.0% | |
| CTTGTGAAGTTTAGAGAGGT+GGG | - | 14601:11468-11487 | MS.gene80883:CDS | 40.0% | |
| GAAGAGAAAGTGGTTTGATG+TGG | - | 14601:12121-12140 | MS.gene80883:CDS | 40.0% | |
| GAGGTTAATCGCATTCAAAC+TGG | - | 14601:11810-11829 | MS.gene80883:CDS | 40.0% | |
| GCAGTTCAAAATGTAAGCAG+GGG | - | 14601:12777-12796 | MS.gene80883:CDS | 40.0% | |
| GTGCAGTTCAAAATGTAAGC+AGG | - | 14601:12775-12794 | MS.gene80883:CDS | 40.0% | |
| TCCTGATTCCTTTCATATGG+GGG | - | 14601:11359-11378 | MS.gene80883:CDS | 40.0% | |
| TCTTGTGAAGTTTAGAGAGG+TGG | - | 14601:11467-11486 | MS.gene80883:CDS | 40.0% | |
| TGAATGCGATTAACCTCCAT+CGG | + | 14601:11807-11826 | MS.gene80883:intergenic | 40.0% | |
| TGATGATTGTGTTAAGGTGG+AGG | - | 14601:12181-12200 | MS.gene80883:CDS | 40.0% | |
| TGATTTATGAGGAGCCTGTA+GGG | - | 14601:12531-12550 | MS.gene80883:CDS | 40.0% | |
| TGCTCTTGTGAAGTTTAGAG+AGG | - | 14601:11464-11483 | MS.gene80883:CDS | 40.0% | |
| TGTGTTAAGGTGGAGGTTAT+GGG | - | 14601:12188-12207 | MS.gene80883:CDS | 40.0% | |
| TGTTACACAGTGAAAGGGTT+GGG | - | 14601:11892-11911 | MS.gene80883:CDS | 40.0% | |
| TTCAAATGCAGCAAAGGTGA+AGG | - | 14601:11623-11642 | MS.gene80883:CDS | 40.0% | |
| TTGATTTATGAGGAGCCTGT+AGG | - | 14601:12530-12549 | MS.gene80883:CDS | 40.0% | |
| TTGTGAAGTTTAGAGAGGTG+GGG | - | 14601:11469-11488 | MS.gene80883:CDS | 40.0% | |
| TTGTGTTAAGGTGGAGGTTA+TGG | - | 14601:12187-12206 | MS.gene80883:CDS | 40.0% | |
| TTGTTACACAGTGAAAGGGT+TGG | - | 14601:11891-11910 | MS.gene80883:CDS | 40.0% | |
| TTTAGAGAGAGAAAGTGAGG+GGG | - | 14601:11203-11222 | MS.gene80883:CDS | 40.0% | |
| ! | ATGGTGGAGTTCTTGAGTAA+TGG | - | 14601:11759-11778 | MS.gene80883:CDS | 40.0% |
| ! | CCCCTTTTGTCTACTTTCTT+AGG | + | 14601:11435-11454 | MS.gene80883:intergenic | 40.0% |
| ! | TGGCAGATTTTTGCAAGGTT+TGG | - | 14601:11387-11406 | MS.gene80883:CDS | 40.0% |
| ! | TTTGAAATGTTGATGGGGAC+AGG | - | 14601:12635-12654 | MS.gene80883:CDS | 40.0% |
| !! | AAGGTGTTTTCTATGGGAGA+AGG | - | 14601:11861-11880 | MS.gene80883:CDS | 40.0% |
| !! | AAGGTTTGGTAATGTTGGAG+AGG | - | 14601:11401-11420 | MS.gene80883:CDS | 40.0% |
| !! | CAAACTGGTTTGTTCATGGA+GGG | - | 14601:11825-11844 | MS.gene80883:CDS | 40.0% |
| !! | GGTGTTGTTACACAGTGAAA+GGG | - | 14601:11887-11906 | MS.gene80883:CDS | 40.0% |
| !! | TCAAACTGGTTTGTTCATGG+AGG | - | 14601:11824-11843 | MS.gene80883:CDS | 40.0% |
| !! | TGGTGTTGTTACACAGTGAA+AGG | - | 14601:11886-11905 | MS.gene80883:CDS | 40.0% |
| AAGAGTCAGAGAGGAGAAGA+AGG | - | 14601:11923-11942 | MS.gene80883:CDS | 45.0% | |
| AAGGGGATTTGCAGATGGTA+AGG | - | 14601:12477-12496 | MS.gene80883:CDS | 45.0% | |
| AATGCAGCAAAGGTGAAGGA+TGG | - | 14601:11627-11646 | MS.gene80883:CDS | 45.0% | |
| ACCTTCAGCTGAAGCTTCAT+CGG | + | 14601:12366-12385 | MS.gene80883:intergenic | 45.0% | |
| AGGGAGATTCAAACTGAGAG+AGG | - | 14601:11249-11268 | MS.gene80883:CDS | 45.0% | |
| AGGGGATTTGCAGATGGTAA+GGG | - | 14601:12478-12497 | MS.gene80883:CDS | 45.0% | |
| ATGGTGTTCCCCTCCATATT+TGG | - | 14601:12030-12049 | MS.gene80883:CDS | 45.0% | |
| CAGATTCCTCCCAAATATGG+AGG | + | 14601:12043-12062 | MS.gene80883:intergenic | 45.0% | |
| CCGTATCAACATCAAAGTCC+TGG | + | 14601:12100-12119 | MS.gene80883:intergenic | 45.0% | |
| CTGCATTTGAACTCTCTCCT+CGG | + | 14601:11614-11633 | MS.gene80883:intergenic | 45.0% | |
| GAAAGTGGTTTGATGTGGCA+AGG | - | 14601:12126-12145 | MS.gene80883:CDS | 45.0% | |
| GAATGCGATTAACCTCCATC+GGG | + | 14601:11806-11825 | MS.gene80883:intergenic | 45.0% | |
| GACACCAATGATGAAAGCAG+CGG | - | 14601:11695-11714 | MS.gene80883:CDS | 45.0% | |
| GATTCCTCCCAAATATGGAG+GGG | + | 14601:12041-12060 | MS.gene80883:intergenic | 45.0% | |
| GGGAGATTCAAACTGAGAGA+GGG | - | 14601:11250-11269 | MS.gene80883:CDS | 45.0% | |
| GGTGATTGAAAGAGTCAGAG+AGG | - | 14601:11914-11933 | MS.gene80883:CDS | 45.0% | |
| GTGTTAAGGTGGAGGTTATG+GGG | - | 14601:12189-12208 | MS.gene80883:CDS | 45.0% | |
| GTTACACAGTGAAAGGGTTG+GGG | - | 14601:11893-11912 | MS.gene80883:CDS | 45.0% | |
| TCAGAGAGGAGAAGAAGGAA+TGG | - | 14601:11928-11947 | MS.gene80883:CDS | 45.0% | |
| TCCCCCATATGAAAGGAATC+AGG | + | 14601:11363-11382 | MS.gene80883:intergenic | 45.0% | |
| TCTCTCAGTTTGAATCTCCC+TGG | + | 14601:11250-11269 | MS.gene80883:intergenic | 45.0% | |
| TGGTGTTCCCCTCCATATTT+GGG | - | 14601:12031-12050 | MS.gene80883:CDS | 45.0% | |
| TGTGAAGTTTAGAGAGGTGG+GGG | - | 14601:11470-11489 | MS.gene80883:CDS | 45.0% | |
| TGTTAAGGTGGAGGTTATGG+GGG | - | 14601:12190-12209 | MS.gene80883:CDS | 45.0% | |
| TTAGAGAGAGAAAGTGAGGG+GGG | - | 14601:11204-11223 | MS.gene80883:CDS | 45.0% | |
| TTGATACGGCGAAGAGAAAG+TGG | - | 14601:12111-12130 | MS.gene80883:CDS | 45.0% | |
| ! | AAATGTTGATGGGGACAGGT+GGG | - | 14601:12639-12658 | MS.gene80883:CDS | 45.0% |
| ! | GGTCGAGGCTTTGATTTATG+AGG | - | 14601:12574-12593 | MS.gene80883:CDS | 45.0% |
| ! | GTTTTCTATGGGAGAAGGTG+TGG | - | 14601:11866-11885 | MS.gene80883:CDS | 45.0% |
| !! | GTTGACTTGGGGGTAAACAT+GGG | - | 14601:12452-12471 | MS.gene80883:CDS | 45.0% |
| AACTCCACCATTTCCTCCGA+AGG | + | 14601:11750-11769 | MS.gene80883:intergenic | 50.0% | |
| AACTGAGAGAGGGAAAGGCA+AGG | - | 14601:11260-11279 | MS.gene80883:CDS | 50.0% | |
| AAGGTGAACCTTGCTCGGTT+CGG | - | 14601:11549-11568 | MS.gene80883:CDS | 50.0% | |
| ACGTCACCGGAAAAATACGG+CGG | - | 14601:12296-12315 | MS.gene80883:CDS | 50.0% | |
| AGAGAAAGTGAGGGGGGAAA+AGG | - | 14601:11210-11229 | MS.gene80883:CDS | 50.0% | |
| AGGAAGGTTTGGAGAGTTCC+AGG | - | 14601:12079-12098 | MS.gene80883:CDS | 50.0% | |
| AGGGGGGAAAAGGGAAAAGT+GGG | - | 14601:11220-11239 | MS.gene80883:CDS | 50.0% | |
| CCAGCTTGTAGAGATACCCA+CGG | + | 14601:11305-11324 | MS.gene80883:intergenic | 50.0% | |
| CCTCGGAACAAAACCTTCGT+CGG | + | 14601:11597-11616 | MS.gene80883:intergenic | 50.0% | |
| CGGGAGAGATGAAGACGTTA+GGG | - | 14601:11569-11588 | MS.gene80883:CDS | 50.0% | |
| CTGAGGAAGGGATAGAGGAT+GGG | - | 14601:12255-12274 | MS.gene80883:CDS | 50.0% | |
| GAACAGAGGGGAAAGAAGGA+GGG | - | 14601:12666-12685 | MS.gene80883:CDS | 50.0% | |
| GAACGAACAGAGGGGAAAGA+AGG | - | 14601:12662-12681 | MS.gene80883:CDS | 50.0% | |
| GAGAAAGTGAGGGGGGAAAA+GGG | - | 14601:11211-11230 | MS.gene80883:CDS | 50.0% | |
| GAGAGGAGAAGAAGGAATGG+TGG | - | 14601:11931-11950 | MS.gene80883:CDS | 50.0% | |
| GATGAAAGCAGCGGTGACAA+CGG | - | 14601:11704-11723 | MS.gene80883:CDS | 50.0% | |
| GGAGGGTTGGAGAGAGATAA+AGG | - | 14601:11842-11861 | MS.gene80883:CDS | 50.0% | |
| GGTTGAGACAAGTGGAAGGA+GGG | - | 14601:12552-12571 | MS.gene80883:CDS | 50.0% | |
| GTAGGGTTGAGACAAGTGGA+AGG | - | 14601:12548-12567 | MS.gene80883:CDS | 50.0% | |
| GTTGAGACAAGTGGAAGGAG+GGG | - | 14601:12553-12572 | MS.gene80883:CDS | 50.0% | |
| TCCACTTGTCTCAACCCTAC+AGG | + | 14601:12548-12567 | MS.gene80883:intergenic | 50.0% | |
| TCCGATGAAGCTTCAGCTGA+AGG | - | 14601:12362-12381 | MS.gene80883:CDS | 50.0% | |
| TCGGGAGAGATGAAGACGTT+AGG | - | 14601:11568-11587 | MS.gene80883:CDS | 50.0% | |
| TGAGGAAGGGATAGAGGATG+GGG | - | 14601:12256-12275 | MS.gene80883:CDS | 50.0% | |
| TGCTGAAGGTGAACCTTGCT+CGG | - | 14601:11544-11563 | MS.gene80883:CDS | 50.0% | |
| TGGGGGTAAACATGGGAGAA+GGG | - | 14601:12459-12478 | MS.gene80883:CDS | 50.0% | |
| TGTGGGTTTGGAAGCTCACA+AGG | - | 14601:12749-12768 | MS.gene80883:CDS | 50.0% | |
| TGTTCCCCTCCATATTTGGG+AGG | - | 14601:12034-12053 | MS.gene80883:CDS | 50.0% | |
| TTGGGGGTAAACATGGGAGA+AGG | - | 14601:12458-12477 | MS.gene80883:CDS | 50.0% | |
| TTTACCCCCAAGTCAACCGT+AGG | + | 14601:12449-12468 | MS.gene80883:intergenic | 50.0% | |
| ! | AATGTTGATGGGGACAGGTG+GGG | - | 14601:12640-12659 | MS.gene80883:CDS | 50.0% |
| ! | GAAATGTTGATGGGGACAGG+TGG | - | 14601:12638-12657 | MS.gene80883:CDS | 50.0% |
| ! | GTCACCGCTGCTTTCATCAT+TGG | + | 14601:11702-11721 | MS.gene80883:intergenic | 50.0% |
| !! | CTGGTTTGTTCATGGAGGGT+TGG | - | 14601:11829-11848 | MS.gene80883:CDS | 50.0% |
| !! | GGTTGACTTGGGGGTAAACA+TGG | - | 14601:12451-12470 | MS.gene80883:CDS | 50.0% |
| AAGAGAGGATGCAGGAGGTG+TGG | - | 14601:11508-11527 | MS.gene80883:CDS | 55.0% | |
| AAGGGAAAAGTGGGGCAACC+AGG | - | 14601:11229-11248 | MS.gene80883:CDS | 55.0% | |
| ACAACATGAGCTGTCGCGTG+TGG | - | 14601:12712-12731 | MS.gene80883:CDS | 55.0% | |
| ACAGGTGGGGAACGAACAGA+GGG | - | 14601:12653-12672 | MS.gene80883:CDS | 55.0% | |
| AGACGTTAGGGTTCCGACGA+AGG | - | 14601:11581-11600 | MS.gene80883:CDS | 55.0% | |
| AGAGGGGAAAGAAGGAGGGA+TGG | - | 14601:12670-12689 | MS.gene80883:CDS | 55.0% | |
| AGGCACAGGCTGAACAGAGT+GGG | + | 14601:12429-12448 | MS.gene80883:intergenic | 55.0% | |
| AGGGAAAAGTGGGGCAACCA+GGG | - | 14601:11230-11249 | MS.gene80883:CDS | 55.0% | |
| AGGTGAACCTTGCTCGGTTC+GGG | - | 14601:11550-11569 | MS.gene80883:CDS | 55.0% | |
| ATGGCAGAGTCTGCAGATGG+GGG | - | 14601:12689-12708 | MS.gene80883:CDS | 55.0% | |
| CAACCGAAACACCAGCTGCT+GGG | + | 14601:12805-12824 | MS.gene80883:intergenic | 55.0% | |
| CAGCAGCTGGTGTTTCGGTT+GGG | - | 14601:12804-12823 | MS.gene80883:CDS | 55.0% | |
| CCGTGGGTATCTCTACAAGC+TGG | - | 14601:11302-11321 | MS.gene80883:CDS | 55.0% | |
| CGAACAGAGGGGAAAGAAGG+AGG | - | 14601:12665-12684 | MS.gene80883:CDS | 55.0% | |
| CTCTGTTCAGCCTGTGCCTA+CGG | - | 14601:12430-12449 | MS.gene80883:CDS | 55.0% | |
| GAGGGGGGAAAAGGGAAAAG+TGG | - | 14601:11219-11238 | MS.gene80883:CDS | 55.0% | |
| GATGGCAGAGTCTGCAGATG+GGG | - | 14601:12688-12707 | MS.gene80883:CDS | 55.0% | |
| GCCTGTAGGGTTGAGACAAG+TGG | - | 14601:12544-12563 | MS.gene80883:CDS | 55.0% | |
| GCTGAGGAAGGGATAGAGGA+TGG | - | 14601:12254-12273 | MS.gene80883:CDS | 55.0% | |
| GCTTGTAGAGATACCCACGG+TGG | + | 14601:11302-11321 | MS.gene80883:intergenic | 55.0% | |
| GGATGGCAGAGTCTGCAGAT+GGG | - | 14601:12687-12706 | MS.gene80883:CDS | 55.0% | |
| GGGAGAAGGGGATTTGCAGA+TGG | - | 14601:12472-12491 | MS.gene80883:CDS | 55.0% | |
| GGGGGGAAAAGGGAAAAGTG+GGG | - | 14601:11221-11240 | MS.gene80883:CDS | 55.0% | |
| GGGGGTAAACATGGGAGAAG+GGG | - | 14601:12460-12479 | MS.gene80883:CDS | 55.0% | |
| GGGTTGAGACAAGTGGAAGG+AGG | - | 14601:12551-12570 | MS.gene80883:CDS | 55.0% | |
| GTTGGAAGAGAGGATGCAGG+AGG | - | 14601:11503-11522 | MS.gene80883:CDS | 55.0% | |
| TAGGCACAGGCTGAACAGAG+TGG | + | 14601:12430-12449 | MS.gene80883:intergenic | 55.0% | |
| TCACCGGAAAAATACGGCGG+CGG | - | 14601:12299-12318 | MS.gene80883:CDS | 55.0% | |
| TCATTTGCACCACCCGATGG+AGG | - | 14601:11791-11810 | MS.gene80883:CDS | 55.0% | |
| TCCACCATTTCCTCCGAAGG+AGG | + | 14601:11747-11766 | MS.gene80883:intergenic | 55.0% | |
| TGCGATTAACCTCCATCGGG+TGG | + | 14601:11803-11822 | MS.gene80883:intergenic | 55.0% | |
| ! | CCTGTGCCTACGGTTGACTT+GGG | - | 14601:12440-12459 | MS.gene80883:CDS | 55.0% |
| ! | GAGAAGGAAGCGTGTGGGTT+TGG | - | 14601:12737-12756 | MS.gene80883:CDS | 55.0% |
| ! | GCTTCAGCTGAAGGTGCAAG+TGG | - | 14601:12371-12390 | MS.gene80883:CDS | 55.0% |
| ! | GGTGTTGGAAGAGAGGATGC+AGG | - | 14601:11500-11519 | MS.gene80883:CDS | 55.0% |
| ! | TGGAGGAGAAGGAAGCGTGT+GGG | - | 14601:12732-12751 | MS.gene80883:CDS | 55.0% |
| !! | ACGCAGAGGTGTTGGAAGAG+AGG | - | 14601:11493-11512 | MS.gene80883:CDS | 55.0% |
| !! | ACTACTGGGAGTGCTGAGGA+AGG | - | 14601:12242-12261 | MS.gene80883:CDS | 55.0% |
| !! | AGAGACTACTGGGAGTGCTG+AGG | - | 14601:12238-12257 | MS.gene80883:CDS | 55.0% |
| !! | CTACTGGGAGTGCTGAGGAA+GGG | - | 14601:12243-12262 | MS.gene80883:CDS | 55.0% |
| !! | CTGTGCCTACGGTTGACTTG+GGG | - | 14601:12441-12460 | MS.gene80883:CDS | 55.0% |
| !! | GAGTGCTGAGGAAGGGATAG+AGG | - | 14601:12250-12269 | MS.gene80883:CDS | 55.0% |
| !! | GGGTGGTGGAAGAGACTACT+GGG | - | 14601:12228-12247 | MS.gene80883:CDS | 55.0% |
| !! | TGGGTGGTGGAAGAGACTAC+TGG | - | 14601:12227-12246 | MS.gene80883:CDS | 55.0% |
| !! | TGTGCCTACGGTTGACTTGG+GGG | - | 14601:12442-12461 | MS.gene80883:CDS | 55.0% |
| !!! | CCGACGAAGGTTTTGTTCCG+AGG | - | 14601:11594-11613 | MS.gene80883:CDS | 55.0% |
| AAAAATACGGCGGCGGACGG+TGG | - | 14601:12306-12325 | MS.gene80883:CDS | 60.0% | |
| ACAAGTGGAAGGAGGGGTCG+AGG | - | 14601:12559-12578 | MS.gene80883:CDS | 60.0% | |
| ACATGAGCTGTCGCGTGTGG+AGG | - | 14601:12715-12734 | MS.gene80883:CDS | 60.0% | |
| AGCAGCGGTGACAACGGTTC+CGG | - | 14601:11710-11729 | MS.gene80883:CDS | 60.0% | |
| ATCCTGAGGCCCAACTGAGC+AGG | + | 14601:12830-12849 | MS.gene80883:intergenic | 60.0% | |
| CAGGTGGGGAACGAACAGAG+GGG | - | 14601:12654-12673 | MS.gene80883:CDS | 60.0% | |
| CATCTCTCCCGAACCGAGCA+AGG | + | 14601:11560-11579 | MS.gene80883:intergenic | 60.0% | |
| CCAACCGAAACACCAGCTGC+TGG | + | 14601:12806-12825 | MS.gene80883:intergenic | 60.0% | |
| CCAGCAGCTGGTGTTTCGGT+TGG | - | 14601:12803-12822 | MS.gene80883:CDS | 60.0% | |
| CCCAAGTCAACCGTAGGCAC+AGG | + | 14601:12443-12462 | MS.gene80883:intergenic | 60.0% | |
| CGGAAAAATACGGCGGCGGA+CGG | - | 14601:12303-12322 | MS.gene80883:CDS | 60.0% | |
| GACAGGTGGGGAACGAACAG+AGG | - | 14601:12652-12671 | MS.gene80883:CDS | 60.0% | |
| GCCTCCTTCGGAGGAAATGG+TGG | - | 14601:11743-11762 | MS.gene80883:CDS | 60.0% | |
| GCCTGTGCCTACGGTTGACT+TGG | - | 14601:12439-12458 | MS.gene80883:CDS | 60.0% | |
| GGACCCAGCAGCTGGTGTTT+CGG | - | 14601:12799-12818 | MS.gene80883:CDS | 60.0% | |
| GGCTCATTTGCACCACCCGA+TGG | - | 14601:11788-11807 | MS.gene80883:CDS | 60.0% | |
| GGGATGGCAGAGTCTGCAGA+TGG | - | 14601:12686-12705 | MS.gene80883:CDS | 60.0% | |
| GGTGCCTCCTTCGGAGGAAA+TGG | - | 14601:11740-11759 | MS.gene80883:CDS | 60.0% | |
| GTGTGGAGAGGAGCTGCTGA+AGG | - | 14601:11530-11549 | MS.gene80883:CDS | 60.0% | |
| TCGGTTGGGCCTGCTCAGTT+GGG | - | 14601:12818-12837 | MS.gene80883:CDS | 60.0% | |
| TTCGGTTGGGCCTGCTCAGT+TGG | - | 14601:12817-12836 | MS.gene80883:CDS | 60.0% | |
| ! | AGGATGCAGGAGGTGTGGTG+TGG | - | 14601:11513-11532 | MS.gene80883:CDS | 60.0% |
| ! | CGTCCGCCGCCGTATTTTTC+CGG | + | 14601:12305-12324 | MS.gene80883:intergenic | 60.0% |
| ! | GTGGAGGAGAAGGAAGCGTG+TGG | - | 14601:12731-12750 | MS.gene80883:CDS | 60.0% |
| ! | TGAAGGTGCAAGTGGTCGCG+AGG | - | 14601:12379-12398 | MS.gene80883:CDS | 60.0% |
| AGAGATACCCACGGTGGCGC+TGG | + | 14601:11296-11315 | MS.gene80883:intergenic | 65.0% | |
| GCTGTCGCGTGTGGAGGAGA+AGG | - | 14601:12721-12740 | MS.gene80883:CDS | 65.0% | |
| GGTGACAACGGTTCCGGCGT+TGG | - | 14601:11716-11735 | MS.gene80883:CDS | 65.0% | |
| TACCAAGCCAGCGCCACCGT+GGG | - | 14601:11286-11305 | MS.gene80883:CDS | 65.0% | |
| TAGAGAGGTGGGGGACGCAG+AGG | - | 14601:11479-11498 | MS.gene80883:CDS | 65.0% | |
| ! | GACAACGGTTCCGGCGTTGG+TGG | - | 14601:11719-11738 | MS.gene80883:CDS | 65.0% |
| ! | GCAGGAGGTGTGGTGTGGAG+AGG | - | 14601:11518-11537 | MS.gene80883:CDS | 65.0% |
| !! | GAAGGAGGCACCACCAACGC+CGG | + | 14601:11732-11751 | MS.gene80883:intergenic | 65.0% |
| !! | GGCGTTGGTGGTGCCTCCTT+CGG | - | 14601:11731-11750 | MS.gene80883:CDS | 65.0% |
| !! | GTTGGTGGTGCCTCCTTCGG+AGG | - | 14601:11734-11753 | MS.gene80883:CDS | 65.0% |
| AAGCAGGGGGACCCAGCAGC+TGG | - | 14601:12791-12810 | MS.gene80883:CDS | 70.0% | |
| CGGTGGCAGGAGGAGGTGGA+CGG | - | 14601:12323-12342 | MS.gene80883:CDS | 70.0% | |
| CTACCAAGCCAGCGCCACCG+TGG | - | 14601:11285-11304 | MS.gene80883:CDS | 70.0% | |
| GGCCTGCTCAGTTGGGCCTC+AGG | - | 14601:12825-12844 | MS.gene80883:CDS | 70.0% | |
| ! | GGTGGGGGACGCAGAGGTGT+TGG | - | 14601:11485-11504 | MS.gene80883:CDS | 70.0% |
| !! | TACCCACGGTGGCGCTGGCT+TGG | + | 14601:11291-11310 | MS.gene80883:intergenic | 70.0% |
| ATACGGCGGCGGACGGTGGC+AGG | - | 14601:12310-12329 | MS.gene80883:CDS | 75.0% | |
| CGGACGGTGGCAGGAGGAGG+TGG | - | 14601:12319-12338 | MS.gene80883:CDS | 75.0% | |
| ! | CGGCGGACGGTGGCAGGAGG+AGG | - | 14601:12316-12335 | MS.gene80883:CDS | 80.0% |
| ! | CGGCGGCGGACGGTGGCAGG+AGG | - | 14601:12313-12332 | MS.gene80883:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 14601 | gene | 11189 | 12887 | 11189 | ID=MS.gene80883 |
| 14601 | mRNA | 11189 | 12887 | 11189 | ID=MS.gene80883.t1;Parent=MS.gene80883 |
| 14601 | exon | 11189 | 12887 | 11189 | ID=MS.gene80883.t1.exon1;Parent=MS.gene80883.t1 |
| 14601 | CDS | 11189 | 12887 | 11189 | ID=cds.MS.gene80883.t1;Parent=MS.gene80883.t1 |
| Gene Sequence |
| Protein sequence |
