Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80960.t1 | XP_013447468.1 | 96.7 | 424 | 14 | 0 | 1 | 424 | 1 | 424 | 1.00E-239 | 839 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80960.t1 | Q9M884 | 60.3 | 411 | 161 | 2 | 10 | 420 | 20 | 428 | 2.3e-144 | 513.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80960.t1 | A0A072TVL2 | 96.7 | 424 | 14 | 0 | 1 | 424 | 1 | 424 | 7.2e-240 | 839.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050085 | MS.gene80960 | 0.810308 | 1.23E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80960.t1 | MTR_7g007320 | 96.698 | 424 | 14 | 0 | 1 | 424 | 1 | 424 | 0.0 | 850 |
| MS.gene80960.t1 | MTR_8g446690 | 71.186 | 59 | 16 | 1 | 161 | 218 | 206 | 264 | 1.32e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80960.t1 | AT3G02570 | 60.442 | 407 | 159 | 2 | 15 | 421 | 25 | 429 | 0.0 | 516 |
| MS.gene80960.t1 | AT1G67070 | 59.005 | 422 | 160 | 6 | 10 | 422 | 22 | 439 | 4.01e-177 | 502 |
| MS.gene80960.t1 | AT1G67070 | 59.005 | 422 | 160 | 6 | 10 | 422 | 22 | 439 | 4.01e-177 | 502 |
| MS.gene80960.t1 | AT1G67070 | 60.252 | 317 | 115 | 4 | 10 | 318 | 22 | 335 | 4.99e-130 | 379 |
Find 110 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATCTACCTTTCTTGTTTA+AGG | 0.068324 | 7.3:+90751504 | MS.gene80960:CDS |
| AAGCTTTCTGAGCTTAATTC+TGG | 0.161202 | 7.3:+90751310 | MS.gene80960:CDS |
| GAACCACATGCTTATTTATC+TGG | 0.172307 | 7.3:+90754507 | MS.gene80960:CDS |
| AGTCGGCACATCTATGAATT+TGG | 0.213240 | 7.3:-90754586 | None:intergenic |
| ATCCTAGCCAACTCCTTATC+TGG | 0.231811 | 7.3:-90752280 | None:intergenic |
| AACACCACTGTTTCCCCTTT+TGG | 0.244366 | 7.3:-90755409 | None:intergenic |
| TGGATTGGTACCCATGATTC+TGG | 0.276246 | 7.3:+90751370 | MS.gene80960:CDS |
| GTCATAAAGTTGTTAACAAA+TGG | 0.315743 | 7.3:+90751476 | MS.gene80960:CDS |
| GTGGTGTTCCCGGCAGTTCC+AGG | 0.325669 | 7.3:+90755424 | MS.gene80960:CDS |
| TTTGAGTGATCCTGTGTTCA+TGG | 0.330499 | 7.3:-90755482 | None:intergenic |
| AATCAATATCCATCCGATAT+TGG | 0.343564 | 7.3:+90754414 | MS.gene80960:CDS |
| TTGTGGATTTATCACTCTTA+AGG | 0.363037 | 7.3:+90752387 | MS.gene80960:CDS |
| TTCTGTTAAGAATTACGATT+GGG | 0.363164 | 7.3:+90751258 | MS.gene80960:CDS |
| CATCTATGAATTTGGGAGTT+AGG | 0.363872 | 7.3:-90754578 | None:intergenic |
| AGTTCAGCATAAGGCTTCAT+TGG | 0.364086 | 7.3:-90751346 | None:intergenic |
| AAAGGGTTAGTCTTAAAGAT+TGG | 0.368646 | 7.3:+90751425 | MS.gene80960:CDS |
| GATAACCCTGATTTGTTGCT+TGG | 0.381000 | 7.3:+90751454 | MS.gene80960:CDS |
| TTATGACCAAGCAACAAATC+AGG | 0.382854 | 7.3:-90751460 | None:intergenic |
| TTTCTTGTTTCTGATGATGA+TGG | 0.384063 | 7.3:+90751400 | MS.gene80960:CDS |
| GGGATATATTTATTTACATA+TGG | 0.387920 | 7.3:-90755349 | None:intergenic |
| AGCTGCAATCACACCAATAT+CGG | 0.389579 | 7.3:-90754427 | None:intergenic |
| CCGGAAGTTGTCGACCTAGT+TGG | 0.397551 | 7.3:+90753552 | MS.gene80960:CDS |
| TCATAAAGTTGTTAACAAAT+GGG | 0.397679 | 7.3:+90751477 | MS.gene80960:CDS |
| CCAACTAGGTCGACAACTTC+CGG | 0.398018 | 7.3:-90753552 | None:intergenic |
| GTCGGCACATCTATGAATTT+GGG | 0.403266 | 7.3:-90754585 | None:intergenic |
| AGGGGAAACAGTGGTGTTCC+CGG | 0.403869 | 7.3:+90755414 | MS.gene80960:CDS |
| AGCTGTGATTCATACCGTTC+CGG | 0.413271 | 7.3:+90753533 | MS.gene80960:CDS |
| TAAATAAGCATGTGGTTCAT+TGG | 0.413389 | 7.3:-90754502 | None:intergenic |
| AGCTTTCTGAGCTTAATTCT+GGG | 0.415899 | 7.3:+90751311 | MS.gene80960:CDS |
| TGAAGCCTTATGCTGAACTT+TGG | 0.417829 | 7.3:+90751350 | MS.gene80960:CDS |
| CTGGTGAAGCATTGTTCCTC+GGG | 0.421661 | 7.3:+90754478 | MS.gene80960:CDS |
| TAAATATATCCCGCCATTTG+AGG | 0.424847 | 7.3:+90755360 | MS.gene80960:CDS |
| GTGAACACTGCCTGTAGAAC+AGG | 0.432988 | 7.3:-90753633 | None:intergenic |
| ACCGTTGTATTCTTCCAAAA+GGG | 0.438391 | 7.3:+90755395 | MS.gene80960:CDS |
| GAGTTGCATCTGTACAGAAC+AGG | 0.440421 | 7.3:+90755577 | MS.gene80960:CDS |
| AACCACATGCTTATTTATCT+GGG | 0.445476 | 7.3:+90754508 | MS.gene80960:CDS |
| TCAATCTCAAATTCCTCAAA+TGG | 0.451979 | 7.3:-90755373 | None:intergenic |
| GACCGTTGTATTCTTCCAAA+AGG | 0.454114 | 7.3:+90755394 | MS.gene80960:CDS |
| GAAAAGAAGGACCAGAATCA+TGG | 0.454156 | 7.3:-90751381 | None:intergenic |
| TTCCCATCTTTATACACATC+AGG | 0.456949 | 7.3:-90752319 | None:intergenic |
| TGGTGTTACAAATGCGAATC+TGG | 0.458387 | 7.3:+90753572 | MS.gene80960:CDS |
| CCTTATGCTGAACTTTGGAT+TGG | 0.462431 | 7.3:+90751355 | MS.gene80960:CDS |
| ATGGAAGGACCTGGAACTGC+CGG | 0.463551 | 7.3:-90755433 | None:intergenic |
| GACAAGGCATTTGACAGAAA+AGG | 0.466603 | 7.3:+90754368 | MS.gene80960:intron |
| CATGTATTAGGTGCTATCTG+TGG | 0.466843 | 7.3:+90752231 | MS.gene80960:intron |
| GACACTCCTCGCAGAATCTC+CGG | 0.467539 | 7.3:-90755319 | None:intergenic |
| ATGTATTAGGTGCTATCTGT+GGG | 0.477009 | 7.3:+90752232 | MS.gene80960:intron |
| CATCCTGATGTGTATAAAGA+TGG | 0.480890 | 7.3:+90752316 | MS.gene80960:CDS |
| GTCATTGCAAGAGCCATCTC+AGG | 0.487041 | 7.3:-90752349 | None:intergenic |
| TATGAATTTGGGAGTTAGGC+CGG | 0.490147 | 7.3:-90754574 | None:intergenic |
| AATTACGATTGGGGTTTACC+TGG | 0.492223 | 7.3:+90751268 | MS.gene80960:CDS |
| CCTGGTGAAGCATTGTTCCT+CGG | 0.492483 | 7.3:+90754477 | MS.gene80960:CDS |
| CAAGGTTAAACCTGTTCTAC+AGG | 0.497471 | 7.3:+90753623 | MS.gene80960:CDS |
| TCCTAGCCAACTCCTTATCT+GGG | 0.501884 | 7.3:-90752279 | None:intergenic |
| TTTACCTGGTCAATTGTCAC+AGG | 0.505143 | 7.3:+90751282 | MS.gene80960:CDS |
| CCAATCCAAAGTTCAGCATA+AGG | 0.505779 | 7.3:-90751355 | None:intergenic |
| ACGCTAATCTCTGTGTAAGC+AGG | 0.520732 | 7.3:-90755541 | None:intergenic |
| GTTCTGTTAAGAATTACGAT+TGG | 0.521470 | 7.3:+90751257 | MS.gene80960:CDS |
| TCACATACCTTAAACAAGAA+AGG | 0.521871 | 7.3:-90751511 | None:intergenic |
| TCATCAGAAACAAGAAAAGA+AGG | 0.521989 | 7.3:-90751394 | None:intergenic |
| TCTCAAATTCCTCAAATGGC+GGG | 0.522656 | 7.3:-90755369 | None:intergenic |
| AGCGAAAAGAGCATCACCTT+CGG | 0.522693 | 7.3:-90755518 | None:intergenic |
| TTCTGATGATGATGGACAAA+GGG | 0.529434 | 7.3:+90751408 | MS.gene80960:CDS |
| TGTGTTCATGGATCCTTCCC+CGG | 0.533313 | 7.3:-90755470 | None:intergenic |
| AACCACGTCAAACTCAATCC+TGG | 0.537535 | 7.3:+90754459 | MS.gene80960:CDS |
| TTCCATGCTCACATACAAGC+AGG | 0.540703 | 7.3:+90754614 | MS.gene80960:CDS |
| TTTGACAGAAAAGGAGCTGT+TGG | 0.543234 | 7.3:+90754377 | MS.gene80960:CDS |
| CACCAGGATTGAGTTTGACG+TGG | 0.544937 | 7.3:-90754461 | None:intergenic |
| CCGAGGAACAATGCTTCACC+AGG | 0.545757 | 7.3:-90754477 | None:intergenic |
| TATACAAGCTCACCCAGATA+AGG | 0.548295 | 7.3:+90752267 | MS.gene80960:CDS |
| TATCAATCTGTTCACAGCAT+CGG | 0.551763 | 7.3:-90753688 | None:intergenic |
| AAGTTTGTGAAGTGAATTGT+GGG | 0.552930 | 7.3:-90751230 | None:intergenic |
| TTAGGTGCTATCTGTGGGGA+AGG | 0.554929 | 7.3:+90752237 | MS.gene80960:intron |
| TGGGAATCATAAACCTGAGA+TGG | 0.555786 | 7.3:+90752336 | MS.gene80960:CDS |
| GGAGCTGTTGGTGCTGCGGT+TGG | 0.560413 | 7.3:+90754389 | MS.gene80960:CDS |
| CATAAAGTTGTTAACAAATG+GGG | 0.561333 | 7.3:+90751478 | MS.gene80960:CDS |
| TATGACCAAGCAACAAATCA+GGG | 0.561583 | 7.3:-90751459 | None:intergenic |
| ATCTCAAATTCCTCAAATGG+CGG | 0.563493 | 7.3:-90755370 | None:intergenic |
| AAAAGAAGGACCAGAATCAT+GGG | 0.564262 | 7.3:-90751380 | None:intergenic |
| GAAGTTTGTGAAGTGAATTG+TGG | 0.564754 | 7.3:-90751231 | None:intergenic |
| TCGCATTTGTAACACCAACT+AGG | 0.564979 | 7.3:-90753566 | None:intergenic |
| TGGAAGGACCTGGAACTGCC+GGG | 0.571877 | 7.3:-90755432 | None:intergenic |
| CCGTTGTATTCTTCCAAAAG+GGG | 0.572343 | 7.3:+90755396 | MS.gene80960:CDS |
| ACCCAGATAAGGAGTTGGCT+AGG | 0.574603 | 7.3:+90752278 | MS.gene80960:CDS |
| TACCTGCTTGTATGTGAGCA+TGG | 0.575867 | 7.3:-90754616 | None:intergenic |
| TCTGACAATGTTGTACGAGC+CGG | 0.581071 | 7.3:+90754555 | MS.gene80960:CDS |
| ATTGATAAATCGACTGCATG+AGG | 0.598903 | 7.3:+90753704 | MS.gene80960:CDS |
| AGCTCACCCAGATAAGGAGT+TGG | 0.600443 | 7.3:+90752273 | MS.gene80960:CDS |
| GCAACCTGTGACAATTGACC+AGG | 0.605256 | 7.3:-90751286 | None:intergenic |
| GCAATCACACCAATATCGGA+TGG | 0.607190 | 7.3:-90754423 | None:intergenic |
| TGTTCTGTACAGATGCAACT+CGG | 0.623652 | 7.3:-90755575 | None:intergenic |
| TGGGGAGTGTATTGAATGCA+TGG | 0.626613 | 7.3:+90754527 | MS.gene80960:CDS |
| TCGACTGCATGAGGAAAGTG+AGG | 0.627796 | 7.3:+90753713 | MS.gene80960:CDS |
| ACCACATGCTTATTTATCTG+GGG | 0.636694 | 7.3:+90754509 | MS.gene80960:CDS |
| TTTCTGATGATGATGGACAA+AGG | 0.639421 | 7.3:+90751407 | MS.gene80960:CDS |
| AAAGTATATGAAATCACCGA+AGG | 0.642755 | 7.3:+90755502 | MS.gene80960:CDS |
| AAAAGGAGCTGTTGGTGCTG+CGG | 0.645246 | 7.3:+90754385 | MS.gene80960:CDS |
| CATGTGGTTCATTGGCCCCG+AGG | 0.655973 | 7.3:-90754494 | None:intergenic |
| AGTTGCATCTGTACAGAACA+GGG | 0.662530 | 7.3:+90755578 | MS.gene80960:CDS |
| GTGAGCATGGAACAAAGAGT+CGG | 0.664307 | 7.3:-90754603 | None:intergenic |
| GGGGAAGGATCCATGAACAC+AGG | 0.664529 | 7.3:+90755472 | MS.gene80960:CDS |
| ATCCTGATGTGTATAAAGAT+GGG | 0.669111 | 7.3:+90752317 | MS.gene80960:CDS |
| TAGTGATCAGAATGAAGACA+AGG | 0.669229 | 7.3:+90753605 | MS.gene80960:CDS |
| TCCCCAGATAAATAAGCATG+TGG | 0.674499 | 7.3:-90754510 | None:intergenic |
| TCTTCCAAAAGGGGAAACAG+TGG | 0.677647 | 7.3:+90755405 | MS.gene80960:CDS |
| TAGGTCGACAACTTCCGGAA+CGG | 0.679265 | 7.3:-90753547 | None:intergenic |
| TCTGTTAAGAATTACGATTG+GGG | 0.690814 | 7.3:+90751259 | MS.gene80960:CDS |
| TGGTGAAGCATTGTTCCTCG+GGG | 0.705943 | 7.3:+90754479 | MS.gene80960:CDS |
| TGTATTAGGTGCTATCTGTG+GGG | 0.728182 | 7.3:+90752233 | MS.gene80960:intron |
| AGTTTGTGAAGTGAATTGTG+GGG | 0.763160 | 7.3:-90751229 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTCTAATAATTTAACTTT+AGG | - | chr7.3:90754916-90754935 | None:intergenic | 10.0% |
| !!! | ATTCTAATAATTTAACTTTA+GGG | - | chr7.3:90754915-90754934 | None:intergenic | 10.0% |
| !!! | TTTTTTTAATGTTTTTTTGT+TGG | + | chr7.3:90751552-90751571 | MS.gene80960:intron | 10.0% |
| !! | AAATTATTAGAATTTACCAT+TGG | + | chr7.3:90754922-90754941 | MS.gene80960:intron | 15.0% |
| !! | TTGTTATAAAGTAAAATATG+TGG | + | chr7.3:90752977-90752996 | MS.gene80960:intron | 15.0% |
| !!! | CTAATTTTCAACTTATAATA+AGG | - | chr7.3:90752596-90752615 | None:intergenic | 15.0% |
| !!! | CTTATTATAAGTTGAAAATT+AGG | + | chr7.3:90752594-90752613 | MS.gene80960:intron | 15.0% |
| !!! | TTTTCTGTTTTTTTCTATTT+AGG | + | chr7.3:90753503-90753522 | MS.gene80960:intron | 15.0% |
| !!! | TTTTTTAAACTTGTAGAATA+AGG | + | chr7.3:90753403-90753422 | MS.gene80960:intron | 15.0% |
| !! | ATAAGCACTTATATGATAAA+CGG | - | chr7.3:90754003-90754022 | None:intergenic | 20.0% |
| !! | ATAATATCCAACTAACTTAA+TGG | - | chr7.3:90753857-90753876 | None:intergenic | 20.0% |
| !! | ATTTAAACAAAGAAATCCAA+GGG | - | chr7.3:90751935-90751954 | None:intergenic | 20.0% |
| !! | ATTTAGTTAACTCAAAAGTT+TGG | + | chr7.3:90753199-90753218 | MS.gene80960:intron | 20.0% |
| !! | GGGATATATTTATTTACATA+TGG | - | chr7.3:90755352-90755371 | None:intergenic | 20.0% |
| !! | GGTAGTATTTAATTATTCTT+TGG | + | chr7.3:90752408-90752427 | MS.gene80960:intron | 20.0% |
| !! | GTTGTATATAGTTTATGAAA+AGG | + | chr7.3:90752187-90752206 | MS.gene80960:intron | 20.0% |
| !! | TACAATAAATCAGTAAAAGA+TGG | - | chr7.3:90753455-90753474 | None:intergenic | 20.0% |
| !! | TATATAGTTTATGAAAAGGT+TGG | + | chr7.3:90752191-90752210 | MS.gene80960:intron | 20.0% |
| !! | TATTGTAATGTTATTCTCTT+GGG | + | chr7.3:90753468-90753487 | MS.gene80960:intron | 20.0% |
| !! | TCATAAAGTTGTTAACAAAT+GGG | + | chr7.3:90751477-90751496 | MS.gene80960:CDS | 20.0% |
| !! | TTATTGTAATGTTATTCTCT+TGG | + | chr7.3:90753467-90753486 | MS.gene80960:intron | 20.0% |
| !!! | ACTTTTATAACATACATCAA+TGG | + | chr7.3:90754670-90754689 | MS.gene80960:intron | 20.0% |
| !!! | ATTATAAGTTGAAAATTAGG+TGG | + | chr7.3:90752597-90752616 | MS.gene80960:intron | 20.0% |
| !!! | GTTGTTTAGTTTTTATGAAA+AGG | + | chr7.3:90751701-90751720 | MS.gene80960:intron | 20.0% |
| !!! | TTAAGTTGTTTATCCAAATA+AGG | - | chr7.3:90754696-90754715 | None:intergenic | 20.0% |
| !!! | TTATTACAGATCTTTTTGTT+TGG | + | chr7.3:90753015-90753034 | MS.gene80960:intron | 20.0% |
| !!! | TTGATGTGTATTTTTTGAAA+CGG | + | chr7.3:90753069-90753088 | MS.gene80960:intron | 20.0% |
| !!! | TTGGATTTCTTTGTTTAAAT+GGG | + | chr7.3:90751935-90751954 | MS.gene80960:intron | 20.0% |
| ! | AAATTCAAATGATAACCCTT+TGG | + | chr7.3:90752934-90752953 | MS.gene80960:intron | 25.0% |
| ! | AACTAACTTAATGGAACAAA+CGG | - | chr7.3:90753848-90753867 | None:intergenic | 25.0% |
| ! | AATTGGTGTGAAATATTCAT+TGG | + | chr7.3:90751584-90751603 | MS.gene80960:intron | 25.0% |
| ! | ATGCAAAAAAACAGAACAAA+AGG | - | chr7.3:90755054-90755073 | None:intergenic | 25.0% |
| ! | ATGGATCAAAAAATTTGTAG+AGG | + | chr7.3:90753913-90753932 | MS.gene80960:intron | 25.0% |
| ! | ATTGTTAGTTAGAATATCAC+AGG | - | chr7.3:90752896-90752915 | None:intergenic | 25.0% |
| ! | CATAAAGTTGTTAACAAATG+GGG | + | chr7.3:90751478-90751497 | MS.gene80960:CDS | 25.0% |
| ! | CATTTAAACAAAGAAATCCA+AGG | - | chr7.3:90751936-90751955 | None:intergenic | 25.0% |
| ! | GATGTATGTTATAAAAGTTG+CGG | - | chr7.3:90754668-90754687 | None:intergenic | 25.0% |
| ! | GATTCATCTTTATTGAGATT+TGG | + | chr7.3:90755026-90755045 | MS.gene80960:intron | 25.0% |
| ! | GTCATAAAGTTGTTAACAAA+TGG | + | chr7.3:90751476-90751495 | MS.gene80960:CDS | 25.0% |
| ! | TACACTTGATTACTATTCTA+AGG | + | chr7.3:90754960-90754979 | MS.gene80960:intron | 25.0% |
| ! | TATTATGAGAATAACTGAAC+TGG | + | chr7.3:90752464-90752483 | MS.gene80960:intron | 25.0% |
| ! | TGTGATATTAACTCAATTGT+AGG | + | chr7.3:90755134-90755153 | MS.gene80960:intron | 25.0% |
| ! | TTCTGTTAAGAATTACGATT+GGG | + | chr7.3:90751258-90751277 | MS.gene80960:CDS | 25.0% |
| !! | AGTTGATTAGTTAATCTGTT+TGG | + | chr7.3:90753738-90753757 | MS.gene80960:intron | 25.0% |
| !! | CTTGGATTTCTTTGTTTAAA+TGG | + | chr7.3:90751934-90751953 | MS.gene80960:intron | 25.0% |
| !! | TAACTCAAAAGTTTGGATTT+TGG | + | chr7.3:90753206-90753225 | MS.gene80960:intron | 25.0% |
| !! | TTTGTTGGTTACTATGTAAT+TGG | + | chr7.3:90751567-90751586 | MS.gene80960:intron | 25.0% |
| !!! | TATGTGATTTTGATTACTAG+TGG | + | chr7.3:90751527-90751546 | MS.gene80960:intron | 25.0% |
| !!! | TATTGTCTTATTTTCTCACA+GGG | + | chr7.3:90755292-90755311 | MS.gene80960:intron | 25.0% |
| !!! | TCTGTTGTTTTTCATGTATT+AGG | + | chr7.3:90752219-90752238 | MS.gene80960:intron | 25.0% |
| !!! | TGATGTGTATTTTTTGAAAC+GGG | + | chr7.3:90753070-90753089 | MS.gene80960:intron | 25.0% |
| !!! | TTATTGTCTTATTTTCTCAC+AGG | + | chr7.3:90755291-90755310 | MS.gene80960:intron | 25.0% |
| AAAGTATATGAAATCACCGA+AGG | + | chr7.3:90755502-90755521 | MS.gene80960:CDS | 30.0% | |
| AACCACATGCTTATTTATCT+GGG | + | chr7.3:90754508-90754527 | MS.gene80960:CDS | 30.0% | |
| AACGGGAATAAATAGAACAT+AGG | + | chr7.3:90753087-90753106 | MS.gene80960:intron | 30.0% | |
| AAGACTGAAATAAGATCCAA+TGG | - | chr7.3:90754941-90754960 | None:intergenic | 30.0% | |
| AAGATGGTTGAATATACCAA+AGG | - | chr7.3:90753439-90753458 | None:intergenic | 30.0% | |
| AAGGAATTATACCTAACAGA+TGG | - | chr7.3:90752767-90752786 | None:intergenic | 30.0% | |
| AAGTTTGTGAAGTGAATTGT+GGG | - | chr7.3:90751233-90751252 | None:intergenic | 30.0% | |
| AATCAATATCCATCCGATAT+TGG | + | chr7.3:90754414-90754433 | MS.gene80960:CDS | 30.0% | |
| ACGGGAATAAATAGAACATA+GGG | + | chr7.3:90753088-90753107 | MS.gene80960:intron | 30.0% | |
| ATCCTGATGTGTATAAAGAT+GGG | + | chr7.3:90752317-90752336 | MS.gene80960:CDS | 30.0% | |
| ATGACCAATATGAAATTCAG+AGG | - | chr7.3:90755005-90755024 | None:intergenic | 30.0% | |
| ATGCATAACCATATACTAGT+TGG | + | chr7.3:90755164-90755183 | MS.gene80960:intron | 30.0% | |
| CATGACGTGTCTTTATTAAA+AGG | + | chr7.3:90753135-90753154 | MS.gene80960:intron | 30.0% | |
| GATGCAAGATAAGAATATCA+AGG | - | chr7.3:90754347-90754366 | None:intergenic | 30.0% | |
| GATTTGATATATGTGGTGTT+AGG | + | chr7.3:90753935-90753954 | MS.gene80960:intron | 30.0% | |
| GGTTGTATTGTATCAGAAAA+AGG | - | chr7.3:90752875-90752894 | None:intergenic | 30.0% | |
| GTTCTGTTAAGAATTACGAT+TGG | + | chr7.3:90751257-90751276 | MS.gene80960:CDS | 30.0% | |
| GTTTGTTCCATTAAGTTAGT+TGG | + | chr7.3:90753847-90753866 | MS.gene80960:intron | 30.0% | |
| TAAATAAGCATGTGGTTCAT+TGG | - | chr7.3:90754505-90754524 | None:intergenic | 30.0% | |
| TCAATACAAACATAGACATC+AGG | - | chr7.3:90752120-90752139 | None:intergenic | 30.0% | |
| TCAATCTCAAATTCCTCAAA+TGG | - | chr7.3:90755376-90755395 | None:intergenic | 30.0% | |
| TCACATACCTTAAACAAGAA+AGG | - | chr7.3:90751514-90751533 | None:intergenic | 30.0% | |
| TCATCAGAAACAAGAAAAGA+AGG | - | chr7.3:90751397-90751416 | None:intergenic | 30.0% | |
| TCTGAATTTCATATTGGTCA+TGG | + | chr7.3:90755004-90755023 | MS.gene80960:intron | 30.0% | |
| TCTGTTAAGAATTACGATTG+GGG | + | chr7.3:90751259-90751278 | MS.gene80960:CDS | 30.0% | |
| TCTTCCTCTGAATTTCATAT+TGG | + | chr7.3:90754998-90755017 | MS.gene80960:intron | 30.0% | |
| TGACCCTAAGAACATATTTA+GGG | - | chr7.3:90754214-90754233 | None:intergenic | 30.0% | |
| TGTAGAGGATTTGATATATG+TGG | + | chr7.3:90753928-90753947 | MS.gene80960:intron | 30.0% | |
| TTAAGTCGTTTAACCAAACA+AGG | - | chr7.3:90753961-90753980 | None:intergenic | 30.0% | |
| TTAGGGTCACATGATATTTA+TGG | + | chr7.3:90754225-90754244 | MS.gene80960:intron | 30.0% | |
| TTCACTCAGTCATATCATTA+AGG | - | chr7.3:90752786-90752805 | None:intergenic | 30.0% | |
| TTGTGGATTTATCACTCTTA+AGG | + | chr7.3:90752387-90752406 | MS.gene80960:CDS | 30.0% | |
| ! | TGATCTACCTTTCTTGTTTA+AGG | + | chr7.3:90751504-90751523 | MS.gene80960:CDS | 30.0% |
| ! | TGTTTGTATTGATGCTTCAT+AGG | + | chr7.3:90752128-90752147 | MS.gene80960:intron | 30.0% |
| !! | AAAGGGTTAGTCTTAAAGAT+TGG | + | chr7.3:90751425-90751444 | MS.gene80960:CDS | 30.0% |
| !! | TCTTTGAAATGAAGCTTGAT+AGG | + | chr7.3:90755233-90755252 | MS.gene80960:intron | 30.0% |
| !! | TGTTGATAACTAATCTGTGT+CGG | + | chr7.3:90751610-90751629 | MS.gene80960:intron | 30.0% |
| !! | TTTCTTGTTTCTGATGATGA+TGG | + | chr7.3:90751400-90751419 | MS.gene80960:CDS | 30.0% |
| !!! | GGTGTTTAGTTTTACGAAAA+AGG | + | chr7.3:90751956-90751975 | MS.gene80960:intron | 30.0% |
| AAAAGAAGGACCAGAATCAT+GGG | - | chr7.3:90751383-90751402 | None:intergenic | 35.0% | |
| AAGCTTTCTGAGCTTAATTC+TGG | + | chr7.3:90751310-90751329 | MS.gene80960:CDS | 35.0% | |
| ACCACATGCTTATTTATCTG+GGG | + | chr7.3:90754509-90754528 | MS.gene80960:CDS | 35.0% | |
| ACCGTTGTATTCTTCCAAAA+GGG | + | chr7.3:90755395-90755414 | MS.gene80960:CDS | 35.0% | |
| AGAATGACAGAAATGAACCA+TGG | - | chr7.3:90753238-90753257 | None:intergenic | 35.0% | |
| AGCTTTCTGAGCTTAATTCT+GGG | + | chr7.3:90751311-90751330 | MS.gene80960:CDS | 35.0% | |
| AGGCCCTAAATATGTTCTTA+GGG | + | chr7.3:90754208-90754227 | MS.gene80960:intron | 35.0% | |
| AGTTGCTTCATTAACACCAA+AGG | - | chr7.3:90752953-90752972 | None:intergenic | 35.0% | |
| AGTTTGTGAAGTGAATTGTG+GGG | - | chr7.3:90751232-90751251 | None:intergenic | 35.0% | |
| ATAAGGTTAGAGCTTACCTT+TGG | + | chr7.3:90753420-90753439 | MS.gene80960:intron | 35.0% | |
| ATCTCAAATTCCTCAAATGG+CGG | - | chr7.3:90755373-90755392 | None:intergenic | 35.0% | |
| ATTGATAAATCGACTGCATG+AGG | + | chr7.3:90753704-90753723 | MS.gene80960:CDS | 35.0% | |
| ATTTCTGTCATTCTCCAAGA+CGG | + | chr7.3:90753244-90753263 | MS.gene80960:intron | 35.0% | |
| CATCCTGATGTGTATAAAGA+TGG | + | chr7.3:90752316-90752335 | MS.gene80960:CDS | 35.0% | |
| CATCTATGAATTTGGGAGTT+AGG | - | chr7.3:90754581-90754600 | None:intergenic | 35.0% | |
| GAACCACATGCTTATTTATC+TGG | + | chr7.3:90754507-90754526 | MS.gene80960:CDS | 35.0% | |
| GAAGTTTGTGAAGTGAATTG+TGG | - | chr7.3:90751234-90751253 | None:intergenic | 35.0% | |
| GTGACCCTAAGAACATATTT+AGG | - | chr7.3:90754215-90754234 | None:intergenic | 35.0% | |
| GTTGCTTCATTAACACCAAA+GGG | - | chr7.3:90752952-90752971 | None:intergenic | 35.0% | |
| TAAATATATCCCGCCATTTG+AGG | + | chr7.3:90755360-90755379 | MS.gene80960:CDS | 35.0% | |
| TAGTGATCAGAATGAAGACA+AGG | + | chr7.3:90753605-90753624 | MS.gene80960:CDS | 35.0% | |
| TATCAATCTGTTCACAGCAT+CGG | - | chr7.3:90753691-90753710 | None:intergenic | 35.0% | |
| TATGACCAAGCAACAAATCA+GGG | - | chr7.3:90751462-90751481 | None:intergenic | 35.0% | |
| TCAATACTCATGAGTGTGAT+TGG | + | chr7.3:90752735-90752754 | MS.gene80960:intron | 35.0% | |
| TCAGATAAGCCAATATGAAC+AGG | + | chr7.3:90754188-90754207 | MS.gene80960:intron | 35.0% | |
| TCGACCAAAAAAGACTGTTT+AGG | - | chr7.3:90753350-90753369 | None:intergenic | 35.0% | |
| TGGCATGCACATATTAATCA+TGG | + | chr7.3:90755184-90755203 | MS.gene80960:intron | 35.0% | |
| TGTTATTCTCTTGGGAGTAA+TGG | + | chr7.3:90753476-90753495 | MS.gene80960:intron | 35.0% | |
| TTATACACTCATTGCGAACA+TGG | + | chr7.3:90753873-90753892 | MS.gene80960:intron | 35.0% | |
| TTATGACCAAGCAACAAATC+AGG | - | chr7.3:90751463-90751482 | None:intergenic | 35.0% | |
| TTCCCATCTTTATACACATC+AGG | - | chr7.3:90752322-90752341 | None:intergenic | 35.0% | |
| TTCTTATCTTGCATCAGACA+AGG | + | chr7.3:90754352-90754371 | MS.gene80960:intron | 35.0% | |
| ! | ACATTGGTCTGAGCAAAATT+GGG | - | chr7.3:90751644-90751663 | None:intergenic | 35.0% |
| ! | ATGTATTAGGTGCTATCTGT+GGG | + | chr7.3:90752232-90752251 | MS.gene80960:intron | 35.0% |
| ! | TATTTAGGGCCTGTTCATAT+TGG | - | chr7.3:90754200-90754219 | None:intergenic | 35.0% |
| ! | TATTTTCTCACAGGGTTTTC+CGG | + | chr7.3:90755300-90755319 | MS.gene80960:intron | 35.0% |
| ! | TCTTGCAATGACAGATTTTG+AGG | + | chr7.3:90752360-90752379 | MS.gene80960:CDS | 35.0% |
| ! | TTGATAACTAATCTGTGTCG+GGG | + | chr7.3:90751612-90751631 | MS.gene80960:intron | 35.0% |
| !! | CATACATCAATGGCCTTATT+TGG | + | chr7.3:90754680-90754699 | MS.gene80960:intron | 35.0% |
| !! | GTTGATAACTAATCTGTGTC+GGG | + | chr7.3:90751611-90751630 | MS.gene80960:intron | 35.0% |
| !! | TTCTGATGATGATGGACAAA+GGG | + | chr7.3:90751408-90751427 | MS.gene80960:CDS | 35.0% |
| !! | TTTCTGATGATGATGGACAA+AGG | + | chr7.3:90751407-90751426 | MS.gene80960:CDS | 35.0% |
| !!! | CTGTTTGGTTTTGAAGAGTT+TGG | + | chr7.3:90753753-90753772 | MS.gene80960:intron | 35.0% |
| !!! | GTTGCCTAAACAGTCTTTTT+TGG | + | chr7.3:90753343-90753362 | MS.gene80960:intron | 35.0% |
| AAAGCAGCCGAACTTCAATT+TGG | - | chr7.3:90753046-90753065 | None:intergenic | 40.0% | |
| AACCAACCAAGCAATCTATG+TGG | - | chr7.3:90755093-90755112 | None:intergenic | 40.0% | |
| AATTACGATTGGGGTTTACC+TGG | + | chr7.3:90751268-90751287 | MS.gene80960:CDS | 40.0% | |
| ACACCTTCAACCTCAAATGT+CGG | - | chr7.3:90751757-90751776 | None:intergenic | 40.0% | |
| ACATAGATTGCTTGGTTGGT+TGG | + | chr7.3:90755092-90755111 | MS.gene80960:intron | 40.0% | |
| AGCTGCAATCACACCAATAT+CGG | - | chr7.3:90754430-90754449 | None:intergenic | 40.0% | |
| AGTCGGCACATCTATGAATT+TGG | - | chr7.3:90754589-90754608 | None:intergenic | 40.0% | |
| AGTTCAGCATAAGGCTTCAT+TGG | - | chr7.3:90751349-90751368 | None:intergenic | 40.0% | |
| AGTTGCATCTGTACAGAACA+GGG | + | chr7.3:90755578-90755597 | MS.gene80960:CDS | 40.0% | |
| ATTGGAACTGTCCATCTGTT+AGG | + | chr7.3:90752753-90752772 | MS.gene80960:intron | 40.0% | |
| CAAGGTTAAACCTGTTCTAC+AGG | + | chr7.3:90753623-90753642 | MS.gene80960:CDS | 40.0% | |
| CAGGCCCTAAATATGTTCTT+AGG | + | chr7.3:90754207-90754226 | MS.gene80960:intron | 40.0% | |
| CATGTCAATCTCATTCTCTC+TGG | + | chr7.3:90752836-90752855 | MS.gene80960:intron | 40.0% | |
| CCAATCCAAAGTTCAGCATA+AGG | - | chr7.3:90751358-90751377 | None:intergenic | 40.0% | |
| CCGTTGTATTCTTCCAAAAG+GGG | + | chr7.3:90755396-90755415 | MS.gene80960:CDS | 40.0% | |
| CCTTATGCTGAACTTTGGAT+TGG | + | chr7.3:90751355-90751374 | MS.gene80960:CDS | 40.0% | |
| GAAAAGAAGGACCAGAATCA+TGG | - | chr7.3:90751384-90751403 | None:intergenic | 40.0% | |
| GACCGTTGTATTCTTCCAAA+AGG | + | chr7.3:90755394-90755413 | MS.gene80960:CDS | 40.0% | |
| GCAGTATTAAAATCCCGTCT+TGG | - | chr7.3:90753261-90753280 | None:intergenic | 40.0% | |
| GGAACTGCCAAATTGAAGTT+CGG | + | chr7.3:90753036-90753055 | MS.gene80960:intron | 40.0% | |
| GTATCCGTGCTTCTTATGAT+GGG | + | chr7.3:90751904-90751923 | MS.gene80960:intron | 40.0% | |
| GTCGGCACATCTATGAATTT+GGG | - | chr7.3:90754588-90754607 | None:intergenic | 40.0% | |
| GTGTCTAACACAGTCATTGT+TGG | + | chr7.3:90751795-90751814 | MS.gene80960:intron | 40.0% | |
| GTTCTTGTCTAACAAGACAC+TGG | + | chr7.3:90752035-90752054 | MS.gene80960:intron | 40.0% | |
| TAAAGACACGTCATGTAGAG+AGG | - | chr7.3:90753130-90753149 | None:intergenic | 40.0% | |
| TAGGTTGCATACGTGAAACT+CGG | + | chr7.3:90755252-90755271 | MS.gene80960:intron | 40.0% | |
| TATACAAGCTCACCCAGATA+AGG | + | chr7.3:90752267-90752286 | MS.gene80960:CDS | 40.0% | |
| TATCCGTGCTTCTTATGATG+GGG | + | chr7.3:90751905-90751924 | MS.gene80960:intron | 40.0% | |
| TATGAATTTGGGAGTTAGGC+CGG | - | chr7.3:90754577-90754596 | None:intergenic | 40.0% | |
| TCCCCAGATAAATAAGCATG+TGG | - | chr7.3:90754513-90754532 | None:intergenic | 40.0% | |
| TCGCATTTGTAACACCAACT+AGG | - | chr7.3:90753569-90753588 | None:intergenic | 40.0% | |
| TCTCAAATTCCTCAAATGGC+GGG | - | chr7.3:90755372-90755391 | None:intergenic | 40.0% | |
| TGATAACTAATCTGTGTCGG+GGG | + | chr7.3:90751613-90751632 | MS.gene80960:intron | 40.0% | |
| TGGGAATCATAAACCTGAGA+TGG | + | chr7.3:90752336-90752355 | MS.gene80960:CDS | 40.0% | |
| TGTATCCGTGCTTCTTATGA+TGG | + | chr7.3:90751903-90751922 | MS.gene80960:intron | 40.0% | |
| TGTGCATGCCAACTAGTATA+TGG | - | chr7.3:90755175-90755194 | None:intergenic | 40.0% | |
| TGTTCTGTACAGATGCAACT+CGG | - | chr7.3:90755578-90755597 | None:intergenic | 40.0% | |
| TTTACCTGGTCAATTGTCAC+AGG | + | chr7.3:90751282-90751301 | MS.gene80960:CDS | 40.0% | |
| TTTCTGTCATTCTCCAAGAC+GGG | + | chr7.3:90753245-90753264 | MS.gene80960:intron | 40.0% | |
| TTTGACAGAAAAGGAGCTGT+TGG | + | chr7.3:90754377-90754396 | MS.gene80960:CDS | 40.0% | |
| TTTGAGTGATCCTGTGTTCA+TGG | - | chr7.3:90755485-90755504 | None:intergenic | 40.0% | |
| ! | CACATTGGTCTGAGCAAAAT+TGG | - | chr7.3:90751645-90751664 | None:intergenic | 40.0% |
| ! | CATGTATTAGGTGCTATCTG+TGG | + | chr7.3:90752231-90752250 | MS.gene80960:intron | 40.0% |
| ! | GACAAGGCATTTGACAGAAA+AGG | + | chr7.3:90754368-90754387 | MS.gene80960:intron | 40.0% |
| ! | TGAAGCCTTATGCTGAACTT+TGG | + | chr7.3:90751350-90751369 | MS.gene80960:CDS | 40.0% |
| ! | TGTATTAGGTGCTATCTGTG+GGG | + | chr7.3:90752233-90752252 | MS.gene80960:intron | 40.0% |
| !! | AAGGGTATCCAACATCACAT+TGG | - | chr7.3:90751660-90751679 | None:intergenic | 40.0% |
| !! | CCCCTTTTGGAAGAATACAA+CGG | - | chr7.3:90755399-90755418 | None:intergenic | 40.0% |
| !! | GATAACCCTGATTTGTTGCT+TGG | + | chr7.3:90751454-90751473 | MS.gene80960:CDS | 40.0% |
| !! | TCCTTCCATCTTTTTGGTCA+CGG | + | chr7.3:90755447-90755466 | MS.gene80960:CDS | 40.0% |
| !! | TGGTGTTACAAATGCGAATC+TGG | + | chr7.3:90753572-90753591 | MS.gene80960:CDS | 40.0% |
| !!! | ACAGATTTTGAGGCTCTTTG+TGG | + | chr7.3:90752370-90752389 | MS.gene80960:CDS | 40.0% |
| !!! | TTGGATTTTGGTCTTGTCCA+TGG | + | chr7.3:90753218-90753237 | MS.gene80960:intron | 40.0% |
| AACCACGTCAAACTCAATCC+TGG | + | chr7.3:90754459-90754478 | MS.gene80960:CDS | 45.0% | |
| ACCAAAAAGATGGAAGGACC+TGG | - | chr7.3:90755445-90755464 | None:intergenic | 45.0% | |
| ACGCTAATCTCTGTGTAAGC+AGG | - | chr7.3:90755544-90755563 | None:intergenic | 45.0% | |
| AGACTGCTTACGAGAGTTCA+TGG | - | chr7.3:90754141-90754160 | None:intergenic | 45.0% | |
| AGCTGTGATTCATACCGTTC+CGG | + | chr7.3:90753533-90753552 | MS.gene80960:CDS | 45.0% | |
| ATCCTAGCCAACTCCTTATC+TGG | - | chr7.3:90752283-90752302 | None:intergenic | 45.0% | |
| CGTAAGCTAAAAGCAGCTGA+TGG | + | chr7.3:90754097-90754116 | MS.gene80960:intron | 45.0% | |
| CTCATGCCACATAGATTGCT+TGG | + | chr7.3:90755084-90755103 | MS.gene80960:intron | 45.0% | |
| GAGACTGACATGTCAATACG+TGG | - | chr7.3:90754804-90754823 | None:intergenic | 45.0% | |
| GAGTTGCATCTGTACAGAAC+AGG | + | chr7.3:90755577-90755596 | MS.gene80960:CDS | 45.0% | |
| GCAATCACACCAATATCGGA+TGG | - | chr7.3:90754426-90754445 | None:intergenic | 45.0% | |
| GTGAGCATGGAACAAAGAGT+CGG | - | chr7.3:90754606-90754625 | None:intergenic | 45.0% | |
| TACCTGCTTGTATGTGAGCA+TGG | - | chr7.3:90754619-90754638 | None:intergenic | 45.0% | |
| TCCTAGCCAACTCCTTATCT+GGG | - | chr7.3:90752282-90752301 | None:intergenic | 45.0% | |
| TCTGACAATGTTGTACGAGC+CGG | + | chr7.3:90754555-90754574 | MS.gene80960:CDS | 45.0% | |
| TCTTCCAAAAGGGGAAACAG+TGG | + | chr7.3:90755405-90755424 | MS.gene80960:CDS | 45.0% | |
| TGCCACATAGATTGCTTGGT+TGG | + | chr7.3:90755088-90755107 | MS.gene80960:intron | 45.0% | |
| TGCTCAGACCAATGTGATGT+TGG | + | chr7.3:90751649-90751668 | MS.gene80960:intron | 45.0% | |
| TTCCATGCTCACATACAAGC+AGG | + | chr7.3:90754614-90754633 | MS.gene80960:CDS | 45.0% | |
| ! | AACACCACTGTTTCCCCTTT+TGG | - | chr7.3:90755412-90755431 | None:intergenic | 45.0% |
| ! | TCCAGGTCCTTCCATCTTTT+TGG | + | chr7.3:90755441-90755460 | MS.gene80960:CDS | 45.0% |
| ! | TGAAGGTGTGTGTGAATGTC+TGG | + | chr7.3:90751768-90751787 | MS.gene80960:intron | 45.0% |
| ! | TGGGGAGTGTATTGAATGCA+TGG | + | chr7.3:90754527-90754546 | MS.gene80960:CDS | 45.0% |
| !! | AGCGAAAAGAGCATCACCTT+CGG | - | chr7.3:90755521-90755540 | None:intergenic | 45.0% |
| !! | ATGTGGTGTTAGGCCTTGTT+TGG | + | chr7.3:90753945-90753964 | MS.gene80960:intron | 45.0% |
| !! | CTATGTAGCACCGACATTTG+AGG | + | chr7.3:90751744-90751763 | MS.gene80960:intron | 45.0% |
| !! | TGGATTGGTACCCATGATTC+TGG | + | chr7.3:90751370-90751389 | MS.gene80960:CDS | 45.0% |
| !! | TTCTCTCTGGTTGAGTTGAG+AGG | + | chr7.3:90752849-90752868 | MS.gene80960:intron | 45.0% |
| !! | AAACAAAATAAAAATAAAAA+GGG | - | chr7.3:90752162-90752181 | None:intergenic | 5.0% |
| !! | TAAACAAAATAAAAATAAAA+AGG | - | chr7.3:90752163-90752182 | None:intergenic | 5.0% |
| !! | TTAAACAAAAAATAAATAAA+GGG | - | chr7.3:90751678-90751697 | None:intergenic | 5.0% |
| !! | TTTAAACAAAAAATAAATAA+AGG | - | chr7.3:90751679-90751698 | None:intergenic | 5.0% |
| !!! | TTATTTATTTTTTGTTTAAA+TGG | + | chr7.3:90751679-90751698 | MS.gene80960:intron | 5.0% |
| !!! | TTATTTTTATTTTGTTTAAA+AGG | + | chr7.3:90752165-90752184 | MS.gene80960:intron | 5.0% |
| ACACTCATTGCGAACATGGC+AGG | + | chr7.3:90753877-90753896 | MS.gene80960:intron | 50.0% | |
| ACCCAGATAAGGAGTTGGCT+AGG | + | chr7.3:90752278-90752297 | MS.gene80960:CDS | 50.0% | |
| AGCTCACCCAGATAAGGAGT+TGG | + | chr7.3:90752273-90752292 | MS.gene80960:CDS | 50.0% | |
| CACCAGGATTGAGTTTGACG+TGG | - | chr7.3:90754464-90754483 | None:intergenic | 50.0% | |
| CCAACTAGGTCGACAACTTC+CGG | - | chr7.3:90753555-90753574 | None:intergenic | 50.0% | |
| GCAACCTGTGACAATTGACC+AGG | - | chr7.3:90751289-90751308 | None:intergenic | 50.0% | |
| GCACCCCATCATAAGAAGCA+CGG | - | chr7.3:90751911-90751930 | None:intergenic | 50.0% | |
| GCCGTGACCAAAAAGATGGA+AGG | - | chr7.3:90755451-90755470 | None:intergenic | 50.0% | |
| GGCAGGAACTCATCAAGAGA+TGG | + | chr7.3:90753894-90753913 | MS.gene80960:intron | 50.0% | |
| GTCATTGCAAGAGCCATCTC+AGG | - | chr7.3:90752352-90752371 | None:intergenic | 50.0% | |
| GTGAACACTGCCTGTAGAAC+AGG | - | chr7.3:90753636-90753655 | None:intergenic | 50.0% | |
| TAGGTCGACAACTTCCGGAA+CGG | - | chr7.3:90753550-90753569 | None:intergenic | 50.0% | |
| TCGACTGCATGAGGAAAGTG+AGG | + | chr7.3:90753713-90753732 | MS.gene80960:CDS | 50.0% | |
| TGTGTTCATGGATCCTTCCC+CGG | - | chr7.3:90755473-90755492 | None:intergenic | 50.0% | |
| ! | GCACCGACATTTGAGGTTGA+AGG | + | chr7.3:90751751-90751770 | MS.gene80960:intron | 50.0% |
| ! | TTAGGTGCTATCTGTGGGGA+AGG | + | chr7.3:90752237-90752256 | MS.gene80960:intron | 50.0% |
| !! | AAAAGGAGCTGTTGGTGCTG+CGG | + | chr7.3:90754385-90754404 | MS.gene80960:CDS | 50.0% |
| !! | CCTGGTGAAGCATTGTTCCT+CGG | + | chr7.3:90754477-90754496 | MS.gene80960:CDS | 50.0% |
| !! | CTGGTGAAGCATTGTTCCTC+GGG | + | chr7.3:90754478-90754497 | MS.gene80960:CDS | 50.0% |
| !! | TCCATCTTTTTGGTCACGGC+CGG | + | chr7.3:90755451-90755470 | MS.gene80960:CDS | 50.0% |
| !! | TGGTGAAGCATTGTTCCTCG+GGG | + | chr7.3:90754479-90754498 | MS.gene80960:CDS | 50.0% |
| ACACGTCATGTAGAGAGGCG+TGG | - | chr7.3:90753125-90753144 | None:intergenic | 55.0% | |
| AGGGGAAACAGTGGTGTTCC+CGG | + | chr7.3:90755414-90755433 | MS.gene80960:CDS | 55.0% | |
| ATGGAAGGACCTGGAACTGC+CGG | - | chr7.3:90755436-90755455 | None:intergenic | 55.0% | |
| CCGAGGAACAATGCTTCACC+AGG | - | chr7.3:90754480-90754499 | None:intergenic | 55.0% | |
| CCGGAAGTTGTCGACCTAGT+TGG | + | chr7.3:90753552-90753571 | MS.gene80960:CDS | 55.0% | |
| GACACTCCTCGCAGAATCTC+CGG | - | chr7.3:90755322-90755341 | None:intergenic | 55.0% | |
| GGGGAAGGATCCATGAACAC+AGG | + | chr7.3:90755472-90755491 | MS.gene80960:CDS | 55.0% | |
| ! | CTTATGATGGGGTGCTCCCT+TGG | + | chr7.3:90751916-90751935 | MS.gene80960:intron | 55.0% |
| ! | GGTTTTCCGGAGATTCTGCG+AGG | + | chr7.3:90755313-90755332 | MS.gene80960:CDS | 55.0% |
| !! | CATCTTTTTGGTCACGGCCG+GGG | + | chr7.3:90755453-90755472 | MS.gene80960:CDS | 55.0% |
| !! | CCATCTTTTTGGTCACGGCC+GGG | + | chr7.3:90755452-90755471 | MS.gene80960:CDS | 55.0% |
| CATGTGGTTCATTGGCCCCG+AGG | - | chr7.3:90754497-90754516 | None:intergenic | 60.0% | |
| CCCGGCCGTGACCAAAAAGA+TGG | - | chr7.3:90755455-90755474 | None:intergenic | 60.0% | |
| TGGAAGGACCTGGAACTGCC+GGG | - | chr7.3:90755435-90755454 | None:intergenic | 60.0% | |
| !! | TTTTTGGTCACGGCCGGGGA+AGG | + | chr7.3:90755457-90755476 | MS.gene80960:CDS | 60.0% |
| GTGGTGTTCCCGGCAGTTCC+AGG | + | chr7.3:90755424-90755443 | MS.gene80960:CDS | 65.0% | |
| !! | GGAGCTGTTGGTGCTGCGGT+TGG | + | chr7.3:90754389-90754408 | MS.gene80960:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 90751214 | 90755630 | 90751214 | ID=MS.gene80960 |
| chr7.3 | mRNA | 90751214 | 90755630 | 90751214 | ID=MS.gene80960.t1;Parent=MS.gene80960 |
| chr7.3 | exon | 90751214 | 90751525 | 90751214 | ID=MS.gene80960.t1.exon1;Parent=MS.gene80960.t1 |
| chr7.3 | CDS | 90751214 | 90751525 | 90751214 | ID=cds.MS.gene80960.t1;Parent=MS.gene80960.t1 |
| chr7.3 | exon | 90752241 | 90752408 | 90752241 | ID=MS.gene80960.t1.exon2;Parent=MS.gene80960.t1 |
| chr7.3 | CDS | 90752241 | 90752408 | 90752241 | ID=cds.MS.gene80960.t1;Parent=MS.gene80960.t1 |
| chr7.3 | exon | 90753525 | 90753734 | 90753525 | ID=MS.gene80960.t1.exon3;Parent=MS.gene80960.t1 |
| chr7.3 | CDS | 90753525 | 90753734 | 90753525 | ID=cds.MS.gene80960.t1;Parent=MS.gene80960.t1 |
| chr7.3 | exon | 90754369 | 90754635 | 90754369 | ID=MS.gene80960.t1.exon4;Parent=MS.gene80960.t1 |
| chr7.3 | CDS | 90754369 | 90754635 | 90754369 | ID=cds.MS.gene80960.t1;Parent=MS.gene80960.t1 |
| chr7.3 | exon | 90755313 | 90755630 | 90755313 | ID=MS.gene80960.t1.exon5;Parent=MS.gene80960.t1 |
| chr7.3 | CDS | 90755313 | 90755630 | 90755313 | ID=cds.MS.gene80960.t1;Parent=MS.gene80960.t1 |
| Gene Sequence |
| Protein sequence |
