Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81151.t1 | RHN51981.1 | 99.4 | 486 | 3 | 0 | 295 | 780 | 72 | 557 | 2.90E-253 | 884.8 |
MS.gene81151.t1 | RHN51981.1 | 86.8 | 53 | 3 | 1 | 1 | 53 | 1 | 49 | 9.50E-10 | 75.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81151.t1 | Q8VYR9 | 77.4 | 544 | 103 | 4 | 238 | 780 | 28 | 552 | 1.3e-220 | 767.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81151.t1 | A0A396HHH8 | 99.4 | 486 | 3 | 0 | 295 | 780 | 72 | 557 | 2.1e-253 | 884.8 |
MS.gene81151.t1 | A0A396HHH8 | 86.8 | 53 | 3 | 1 | 1 | 53 | 1 | 49 | 6.8e-10 | 75.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene20168 | MS.gene81151 | PPI |
MS.gene049014 | MS.gene81151 | PPI |
MS.gene55875 | MS.gene81151 | PPI |
MS.gene81151 | MS.gene06187 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81151.t1 | MTR_0050s0160 | 99.177 | 486 | 4 | 0 | 295 | 780 | 72 | 557 | 0.0 | 946 |
MS.gene81151.t1 | MTR_0050s0160 | 88.679 | 53 | 2 | 1 | 1 | 53 | 1 | 49 | 1.04e-25 | 112 |
MS.gene81151.t1 | MTR_1g016450 | 70.186 | 483 | 130 | 3 | 296 | 778 | 95 | 563 | 0.0 | 666 |
MS.gene81151.t1 | MTR_8g101640 | 72.016 | 486 | 126 | 4 | 297 | 778 | 85 | 564 | 0.0 | 664 |
MS.gene81151.t1 | MTR_8g101640 | 72.016 | 486 | 126 | 4 | 297 | 778 | 85 | 564 | 0.0 | 664 |
MS.gene81151.t1 | MTR_2g048385 | 91.818 | 220 | 18 | 0 | 75 | 294 | 1 | 220 | 5.58e-141 | 414 |
MS.gene81151.t1 | MTR_8g031550 | 32.402 | 358 | 231 | 5 | 404 | 754 | 595 | 948 | 4.25e-38 | 154 |
MS.gene81151.t1 | MTR_8g031550 | 32.402 | 358 | 231 | 5 | 404 | 754 | 595 | 948 | 5.98e-38 | 153 |
MS.gene81151.t1 | MTR_7g018620 | 35.948 | 306 | 141 | 7 | 34 | 294 | 26 | 321 | 8.98e-37 | 141 |
MS.gene81151.t1 | MTR_7g451160 | 48.780 | 123 | 60 | 2 | 81 | 203 | 8 | 127 | 1.73e-34 | 132 |
MS.gene81151.t1 | MTR_7g076700 | 30.726 | 358 | 237 | 5 | 404 | 754 | 31 | 384 | 1.13e-31 | 131 |
MS.gene81151.t1 | MTR_6g021620 | 45.872 | 109 | 55 | 1 | 75 | 179 | 1 | 109 | 2.25e-31 | 119 |
MS.gene81151.t1 | MTR_6g052002 | 45.342 | 161 | 86 | 2 | 75 | 235 | 1 | 159 | 1.62e-29 | 120 |
MS.gene81151.t1 | MTR_4g092790 | 29.504 | 383 | 232 | 8 | 400 | 754 | 126 | 498 | 6.13e-26 | 114 |
MS.gene81151.t1 | MTR_4g092790 | 29.504 | 383 | 232 | 8 | 400 | 754 | 126 | 498 | 5.06e-25 | 111 |
MS.gene81151.t1 | MTR_1g036850 | 42.697 | 89 | 47 | 2 | 72 | 159 | 1 | 86 | 5.50e-18 | 81.3 |
MS.gene81151.t1 | MTR_4g065180 | 32.609 | 92 | 43 | 1 | 75 | 166 | 1 | 73 | 7.19e-12 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81151.t1 | AT5G51710 | 77.248 | 545 | 104 | 4 | 237 | 780 | 27 | 552 | 0.0 | 829 |
MS.gene81151.t1 | AT5G51710 | 77.248 | 545 | 104 | 4 | 237 | 780 | 27 | 552 | 0.0 | 827 |
MS.gene81151.t1 | AT5G11800 | 73.125 | 480 | 123 | 3 | 297 | 775 | 96 | 570 | 0.0 | 680 |
MS.gene81151.t1 | AT2G19600 | 73.760 | 484 | 117 | 4 | 296 | 778 | 91 | 565 | 0.0 | 674 |
MS.gene81151.t1 | AT4G00630 | 31.088 | 386 | 252 | 6 | 404 | 779 | 592 | 973 | 9.02e-38 | 152 |
MS.gene81151.t1 | AT1G01790 | 31.347 | 386 | 251 | 6 | 404 | 779 | 612 | 993 | 9.33e-38 | 152 |
MS.gene81151.t1 | AT1G01790 | 31.347 | 386 | 251 | 6 | 404 | 779 | 612 | 993 | 9.33e-38 | 152 |
MS.gene81151.t1 | AT4G00630 | 30.273 | 403 | 244 | 8 | 404 | 779 | 592 | 984 | 6.73e-37 | 150 |
MS.gene81151.t1 | AT4G04850 | 30.198 | 404 | 230 | 10 | 386 | 757 | 114 | 497 | 2.01e-30 | 129 |
MS.gene81151.t1 | AT4G04850 | 30.348 | 402 | 228 | 10 | 388 | 757 | 116 | 497 | 1.18e-29 | 125 |
Find 171 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGCTTGCATCTGTTATTT+TGG | 0.125396 | 6.1:+54561523 | MS.gene81151:CDS |
TCTTGAGCTGGGTTCATTTA+TGG | 0.141653 | 6.1:+54560737 | MS.gene81151:CDS |
AACTTGAAGCACGGGATATT+TGG | 0.149594 | 6.1:-54556317 | None:intergenic |
CTTCTTGCAGGCTCCCTTAT+TGG | 0.156333 | 6.1:+54557683 | MS.gene81151:CDS |
GTGGGGCCTGTTGCTGTTCT+TGG | 0.168719 | 6.1:+54558436 | MS.gene81151:CDS |
TGTTCTCGCTTGCATTTATT+TGG | 0.227826 | 6.1:+54551345 | MS.gene81151:CDS |
CACTGGTTCCCTTCAGAAAA+TGG | 0.259198 | 6.1:+54563192 | MS.gene81151:CDS |
AAAATGTATCTTCTCCTTCT+AGG | 0.259646 | 6.1:+54563016 | MS.gene81151:CDS |
GTTGAGACGGTCGCACAATT+TGG | 0.261467 | 6.1:+54558227 | MS.gene81151:CDS |
AACCGGTCCAATTCAGTTTC+AGG | 0.270598 | 6.1:-54551422 | None:intergenic |
TTTCCTATCGTGGTGGGATT+TGG | 0.272158 | 6.1:-54551497 | None:intergenic |
ATTGTGGGCTATCTTCTTGC+AGG | 0.281597 | 6.1:+54557671 | MS.gene81151:CDS |
GGTATCTCACTTGCTCAAAT+TGG | 0.282639 | 6.1:+54561717 | MS.gene81151:CDS |
TTGCAATAAAGAAATGAGTA+TGG | 0.295957 | 6.1:+54551640 | MS.gene81151:CDS |
GATACCAGCTGTCATTAATC+TGG | 0.313023 | 6.1:+54563158 | MS.gene81151:CDS |
TTGAGACGGTCGCACAATTT+GGG | 0.314334 | 6.1:+54558228 | MS.gene81151:CDS |
GAGTATGGGGTCAGAGATAA+GGG | 0.323060 | 6.1:+54551655 | MS.gene81151:CDS |
AATGGAGTGCCTTTGGATTA+TGG | 0.323743 | 6.1:+54550402 | MS.gene81151:CDS |
ATTTGCTTTGCTCCCTGTCT+TGG | 0.333252 | 6.1:+54558978 | MS.gene81151:CDS |
AGAGATAAGGGGAACTACTA+TGG | 0.333384 | 6.1:+54551667 | MS.gene81151:CDS |
CCTATCACGAGTTTCTTTAT+CGG | 0.333568 | 6.1:-54550477 | None:intergenic |
GTCATTATACTTCAAGTTAT+GGG | 0.341931 | 6.1:+54551790 | MS.gene81151:CDS |
GACAACCTTGATTGACAAAA+AGG | 0.346624 | 6.1:+54556157 | MS.gene81151:CDS |
GCTATAGTTACAAAGGCCTT+TGG | 0.347814 | 6.1:+54561572 | MS.gene81151:CDS |
ATCAGTTGGTTTCTATCAAC+TGG | 0.352481 | 6.1:+54551091 | MS.gene81151:intron |
TTTACAAGGGATTATTTCAA+TGG | 0.365914 | 6.1:+54559017 | MS.gene81151:CDS |
AAGGCACTCCATTTCTTCTT+CGG | 0.369996 | 6.1:-54550392 | None:intergenic |
GCTTGGTCTTAGTCTTGAGC+TGG | 0.373787 | 6.1:+54560725 | MS.gene81151:CDS |
TGTCATTATACTTCAAGTTA+TGG | 0.375318 | 6.1:+54551789 | MS.gene81151:CDS |
GGCATGATATCCCGATATTC+CGG | 0.375562 | 6.1:-54551377 | None:intergenic |
GTTCATTAGTGAAATGGTTC+AGG | 0.378502 | 6.1:+54557721 | MS.gene81151:CDS |
CCGTGCTTCAAGTTGATTTG+AGG | 0.379621 | 6.1:+54556326 | MS.gene81151:CDS |
TGTGCTAGGGTTTGTTCATC+TGG | 0.379914 | 6.1:+54550449 | MS.gene81151:CDS |
GGGCCTGTTGCTGTTCTTGG+AGG | 0.381843 | 6.1:+54558439 | MS.gene81151:CDS |
TCTGTCAGTTTCTCTTCATC+TGG | 0.383639 | 6.1:-54551242 | None:intergenic |
GTGCAGGCTAATATCAGATT+TGG | 0.388173 | 6.1:+54557424 | MS.gene81151:intron |
TTTGCTTTGCTCCCTGTCTT+GGG | 0.393726 | 6.1:+54558979 | MS.gene81151:CDS |
AGAGGAACCTGAAACTGAAT+TGG | 0.393937 | 6.1:+54551415 | MS.gene81151:CDS |
GCTTCAAGACGTGTTCTCTC+TGG | 0.394209 | 6.1:+54556112 | MS.gene81151:CDS |
CTATAGTTACAAAGGCCTTT+GGG | 0.397934 | 6.1:+54561573 | MS.gene81151:CDS |
CCACAATCATGACATGCATA+TGG | 0.397957 | 6.1:-54551577 | None:intergenic |
AGACTTTGCTCAACATACTT+TGG | 0.398640 | 6.1:+54560782 | MS.gene81151:CDS |
CAATGGCACCGAAGAAGAAA+TGG | 0.399708 | 6.1:+54550384 | None:intergenic |
TTTGAAGTTCATTAGTGAAA+TGG | 0.399813 | 6.1:+54557715 | MS.gene81151:CDS |
AAGAAGAAATGGAGTGCCTT+TGG | 0.402279 | 6.1:+54550395 | MS.gene81151:CDS |
GCATGTCATGATTGTGGAAA+TGG | 0.403241 | 6.1:+54551583 | MS.gene81151:CDS |
TTATACATGTGCAGTTCCTT+TGG | 0.405773 | 6.1:+54561486 | MS.gene81151:CDS |
AGAGGAAGAGAGCTGCAAAA+AGG | 0.409618 | 6.1:-54561448 | None:intergenic |
CTTCATGTTCAAGTTACAAT+TGG | 0.410706 | 6.1:+54558805 | MS.gene81151:CDS |
TCGGAACCGTGGTACCGTTA+TGG | 0.410853 | 6.1:+54551130 | MS.gene81151:CDS |
TTATTACATGTAGGTTATTG+TGG | 0.411773 | 6.1:+54557655 | MS.gene81151:intron |
CTTTCTGCTTGTTATCTGCA+TGG | 0.415852 | 6.1:+54560188 | MS.gene81151:CDS |
GTAATATTCATGTTCCTTTG+CGG | 0.421012 | 6.1:+54558475 | MS.gene81151:CDS |
ATGGAGTTCCGAGTGTTTGA+TGG | 0.421278 | 6.1:+54551158 | MS.gene81151:CDS |
AATGATGCGGCTCTCATCTC+AGG | 0.427350 | 6.1:+54560059 | MS.gene81151:CDS |
GAGCTGGGTTCATTTATGGC+TGG | 0.433331 | 6.1:+54560741 | MS.gene81151:CDS |
ATCTGGGTGTTCTCATGCAC+TGG | 0.435328 | 6.1:+54563175 | MS.gene81151:CDS |
TGGTACCGTTATGGCAGAAA+TGG | 0.436177 | 6.1:+54551139 | MS.gene81151:CDS |
AGGTTTGGAAGATGTAGAAA+TGG | 0.438125 | 6.1:+54551526 | MS.gene81151:CDS |
GCAGGCTCCCTTATTGGACC+AGG | 0.438323 | 6.1:+54557689 | MS.gene81151:CDS |
GGTTTGGAAGATGTAGAAAT+GGG | 0.438460 | 6.1:+54551527 | MS.gene81151:CDS |
TGAGTATGGGGTCAGAGATA+AGG | 0.440403 | 6.1:+54551654 | MS.gene81151:CDS |
TATGCCAACTAACCTGTTGA+TGG | 0.440694 | 6.1:-54551322 | None:intergenic |
TATTACATGTAGGTTATTGT+GGG | 0.443232 | 6.1:+54557656 | MS.gene81151:intron |
TGAGAGCCGTTGTCCCTAGA+AGG | 0.445118 | 6.1:-54563030 | None:intergenic |
TATTCTGTTGCAGGGAGTAT+TGG | 0.452462 | 6.1:+54555900 | MS.gene81151:intron |
CCGATAAAGAAACTCGTGAT+AGG | 0.455027 | 6.1:+54550477 | MS.gene81151:CDS |
GTGGAATCGACGCCATCAAC+AGG | 0.455113 | 6.1:+54551310 | MS.gene81151:CDS |
TTCAAATCTTCATCTTGTTG+AGG | 0.461911 | 6.1:+54561770 | MS.gene81151:CDS |
AGAAAGCAACAGCAGCTAGC+TGG | 0.466155 | 6.1:-54560171 | None:intergenic |
ATCGTTTCTGCAGCCATTGG+TGG | 0.467942 | 6.1:+54557455 | MS.gene81151:CDS |
AGCCCTCCAAGAACAGCAAC+AGG | 0.469093 | 6.1:-54558442 | None:intergenic |
GATAGGAAAAGAGAAAGGTT+TGG | 0.470238 | 6.1:+54551511 | MS.gene81151:CDS |
TGGTGGGATTTGGATTTCCC+TGG | 0.471564 | 6.1:-54551487 | None:intergenic |
TTACAAGGGATTATTTCAAT+GGG | 0.474466 | 6.1:+54559018 | MS.gene81151:CDS |
AGGGACAACGGCTCTCAGTC+TGG | 0.476508 | 6.1:+54563036 | MS.gene81151:CDS |
CTTGGTCTTAGTCTTGAGCT+GGG | 0.477769 | 6.1:+54560726 | MS.gene81151:CDS |
TGCAATAAAGAAATGAGTAT+GGG | 0.478957 | 6.1:+54551641 | MS.gene81151:CDS |
CATGATTGTGGAAATGGAAC+AGG | 0.481577 | 6.1:+54551589 | MS.gene81151:CDS |
TGATCGTGATCTGTTGTGCT+AGG | 0.481837 | 6.1:+54550435 | MS.gene81151:CDS |
TTTCTGCTTGTTATCTGCAT+GGG | 0.483861 | 6.1:+54560189 | MS.gene81151:CDS |
AAAGAACCATCATTAGATTC+AGG | 0.485762 | 6.1:-54550530 | None:intergenic |
GGCCTGTTGCTGTTCTTGGA+GGG | 0.487454 | 6.1:+54558440 | MS.gene81151:CDS |
GCTCTCTTCCTCTCAAGTAT+TGG | 0.492170 | 6.1:+54561458 | MS.gene81151:CDS |
CACAATCATGACATGCATAT+GGG | 0.493273 | 6.1:-54551576 | None:intergenic |
CCACTGTTACCACCCAAGAC+AGG | 0.497556 | 6.1:-54558991 | None:intergenic |
TAGCACTGTGGCTGATCAGC+AGG | 0.498448 | 6.1:+54555193 | MS.gene81151:CDS |
GACGCCATCAACAGGTTAGT+TGG | 0.498821 | 6.1:+54551318 | MS.gene81151:CDS |
CTGCTACATCTGTACTGTCT+TGG | 0.502541 | 6.1:+54560010 | MS.gene81151:CDS |
CAGGCTCCCTTATTGGACCA+GGG | 0.504745 | 6.1:+54557690 | MS.gene81151:CDS |
TTCCAGTGCAGTGACAAGCT+TGG | 0.505152 | 6.1:+54560708 | MS.gene81151:intron |
ATGAACCTTGAGTCGTCAAC+CGG | 0.505318 | 6.1:-54551439 | None:intergenic |
ATCCATCTAGTTAAAAGCTG+TGG | 0.511088 | 6.1:+54558417 | MS.gene81151:intron |
ATCATCGTTTCTGCAGCCAT+TGG | 0.516008 | 6.1:+54557452 | MS.gene81151:CDS |
AAATGTATCTTCTCCTTCTA+GGG | 0.518306 | 6.1:+54563017 | MS.gene81151:CDS |
AAATTTGCTTTGCAGTTATG+TGG | 0.518831 | 6.1:+54558581 | MS.gene81151:intron |
AGAAAATGGCACACAAAATG+AGG | 0.524836 | 6.1:+54563206 | MS.gene81151:CDS |
TTGGACCGGTTGACGACTCA+AGG | 0.526396 | 6.1:+54551434 | MS.gene81151:CDS |
CTCAAATCAACTTGAAGCAC+GGG | 0.526490 | 6.1:-54556325 | None:intergenic |
TCCATCTAGTTAAAAGCTGT+GGG | 0.527354 | 6.1:+54558418 | MS.gene81151:intron |
GAACTCCATTTCTGCCATAA+CGG | 0.528365 | 6.1:-54551144 | None:intergenic |
GCCTATGTCTGATGAAGAAG+AGG | 0.532134 | 6.1:+54551397 | MS.gene81151:CDS |
ACTGCTCCTGAATCTAATGA+TGG | 0.534051 | 6.1:+54550524 | MS.gene81151:CDS |
ATACCAGCTGTCATTAATCT+GGG | 0.534409 | 6.1:+54563159 | MS.gene81151:CDS |
TGCTCAACATACTTTGGACC+AGG | 0.534922 | 6.1:+54560788 | MS.gene81151:CDS |
GGCTCCCTTATTGGACCAGG+GGG | 0.538524 | 6.1:+54557692 | MS.gene81151:CDS |
ACAAACAGAGTATATGATCA+AGG | 0.540994 | 6.1:+54551737 | MS.gene81151:CDS |
AATCCAAATCCCACCACGAT+AGG | 0.541503 | 6.1:+54551494 | MS.gene81151:CDS |
CTTCTTTGCCATCAAACACT+CGG | 0.548927 | 6.1:-54551166 | None:intergenic |
ATGGCAAAGAAGATGCATAC+TGG | 0.552364 | 6.1:+54551177 | MS.gene81151:CDS |
CCTTTGCGGAATTCTTGCCA+TGG | 0.554570 | 6.1:+54558489 | MS.gene81151:CDS |
TCCTCTTCTTCATCAGACAT+AGG | 0.554962 | 6.1:-54551398 | None:intergenic |
TCAGAGGTCGTGCTCGCCAA+TGG | 0.557031 | 6.1:+54551279 | MS.gene81151:CDS |
GAGATAAGGGGAACTACTAT+GGG | 0.561766 | 6.1:+54551668 | MS.gene81151:CDS |
AGGCTCCCTTATTGGACCAG+GGG | 0.564639 | 6.1:+54557691 | MS.gene81151:CDS |
AGAAAAGACGATTCCACCAA+TGG | 0.571482 | 6.1:-54557468 | None:intergenic |
CAGGCTAATATCAGATTTGG+TGG | 0.572179 | 6.1:+54557427 | MS.gene81151:intron |
ACACCCAGATTAATGACAGC+TGG | 0.576517 | 6.1:-54563162 | None:intergenic |
TTTCCCTGGTCACTATCTTG+TGG | 0.577317 | 6.1:-54551473 | None:intergenic |
TGAGACGGTCGCACAATTTG+GGG | 0.577831 | 6.1:+54558229 | MS.gene81151:CDS |
GCTTTGCTCCCTGTCTTGGG+TGG | 0.579228 | 6.1:+54558982 | MS.gene81151:CDS |
TGGTATCAGAGCAACGATCT+CGG | 0.580690 | 6.1:+54551111 | MS.gene81151:CDS |
TACTTCAAGTTATGGGACCC+AGG | 0.581916 | 6.1:+54551797 | MS.gene81151:CDS |
AACCTGAAACTGAATTGGAC+CGG | 0.581932 | 6.1:+54551420 | MS.gene81151:CDS |
CCTCAAATCAACTTGAAGCA+CGG | 0.582244 | 6.1:-54556326 | None:intergenic |
CACTGTTACCACCCAAGACA+GGG | 0.583689 | 6.1:-54558990 | None:intergenic |
CTCGCCAATGGTCACACTGG+TGG | 0.584319 | 6.1:+54551291 | MS.gene81151:CDS |
AATGGAACAGGAGAACAAAA+CGG | 0.584567 | 6.1:+54551601 | MS.gene81151:CDS |
TTATATCAGGACTGTGCAGT+GGG | 0.584874 | 6.1:+54558949 | MS.gene81151:intron |
TTTGCTTTGCAGTTATGTGG+AGG | 0.587775 | 6.1:+54558584 | MS.gene81151:intron |
CCTGTCTTGGGTGGTAACAG+TGG | 0.589302 | 6.1:+54558991 | MS.gene81151:CDS |
TTTATATCAGGACTGTGCAG+TGG | 0.591300 | 6.1:+54558948 | MS.gene81151:intron |
GATCGTGATCTGTTGTGCTA+GGG | 0.592089 | 6.1:+54550436 | MS.gene81151:CDS |
ATCATTAGTTTGAGAAAGCG+AGG | 0.595444 | 6.1:-54560042 | None:intergenic |
GTGCTCGCCAATGGTCACAC+TGG | 0.605649 | 6.1:+54551288 | MS.gene81151:CDS |
GATTCCACCAGTGTGACCAT+TGG | 0.606399 | 6.1:-54551295 | None:intergenic |
TGTTGTTGCTATAGTTACAA+AGG | 0.610441 | 6.1:+54561565 | MS.gene81151:CDS |
AGATATCCACATGGTTCCAA+AGG | 0.610884 | 6.1:-54561502 | None:intergenic |
ACCACGATAGGAAAAGAGAA+AGG | 0.613070 | 6.1:+54551506 | MS.gene81151:CDS |
CGTGTTCTCTCTGGAAAACG+AGG | 0.618046 | 6.1:+54556121 | MS.gene81151:CDS |
GGTATCAATTTAAACAAAAG+CGG | 0.620299 | 6.1:-54563141 | None:intergenic |
GCAATAAAGAAATGAGTATG+GGG | 0.621508 | 6.1:+54551642 | MS.gene81151:CDS |
AGGAATACAAACCTTTGCCA+AGG | 0.630377 | 6.1:-54558288 | None:intergenic |
GTCAATGTCATCAACAGCAG+TGG | 0.630563 | 6.1:+54558643 | MS.gene81151:CDS |
AGATGTAGCAGTGAGATACA+AGG | 0.635552 | 6.1:-54559998 | None:intergenic |
CCATATGCATGTCATGATTG+TGG | 0.638276 | 6.1:+54551577 | MS.gene81151:CDS |
TAAGCATTCCAATACTTGAG+AGG | 0.640797 | 6.1:-54561466 | None:intergenic |
TCAACCACAAGATAGTGACC+AGG | 0.641180 | 6.1:+54551469 | MS.gene81151:CDS |
TAAGAGAAATGATACGCGTG+AGG | 0.641750 | 6.1:+54555954 | MS.gene81151:CDS |
TGTTGATGACATTGACAGAA+AGG | 0.642047 | 6.1:-54558636 | None:intergenic |
ATACAGGATGATTGATGTCG+TGG | 0.642290 | 6.1:-54551693 | None:intergenic |
CTGGTGGCTGCTATGCATTG+AGG | 0.655291 | 6.1:+54551196 | MS.gene81151:CDS |
GTTTGGAAGATGTAGAAATG+GGG | 0.658874 | 6.1:+54551528 | MS.gene81151:CDS |
GCTTTCTCAAACTAATGATG+CGG | 0.660607 | 6.1:+54560046 | MS.gene81151:CDS |
TCTTCTCCTTCTAGGGACAA+CGG | 0.660690 | 6.1:+54563024 | MS.gene81151:CDS |
AAGAGAAATGATACGCGTGA+GGG | 0.664369 | 6.1:+54555955 | MS.gene81151:CDS |
TGTGGAGGAAAATTGTCTGA+GGG | 0.672358 | 6.1:+54558599 | MS.gene81151:CDS |
CCATGGCAAGAATTCCGCAA+AGG | 0.673003 | 6.1:-54558489 | None:intergenic |
ATGTGGAGGAAAATTGTCTG+AGG | 0.673153 | 6.1:+54558598 | MS.gene81151:CDS |
CAACCACAAGATAGTGACCA+GGG | 0.674930 | 6.1:+54551470 | MS.gene81151:CDS |
GCAACAACACCATAATCCAA+AGG | 0.679526 | 6.1:-54550411 | None:intergenic |
GAGCAACGATCTCGGAACCG+TGG | 0.690395 | 6.1:+54551119 | MS.gene81151:CDS |
TGTCTTAAGACTGTACCCAA+AGG | 0.701923 | 6.1:-54561588 | None:intergenic |
TTTCTGCCATAACGGTACCA+CGG | 0.705094 | 6.1:-54551136 | None:intergenic |
GCAGTTCCTTTGGAACCATG+TGG | 0.713233 | 6.1:+54561496 | MS.gene81151:CDS |
AGTATGGGGTCAGAGATAAG+GGG | 0.721262 | 6.1:+54551656 | MS.gene81151:CDS |
CCATCTAGTTAAAAGCTGTG+GGG | 0.724416 | 6.1:+54558419 | MS.gene81151:intron |
GCAAAGAAGATGCATACTGG+TGG | 0.744457 | 6.1:+54551180 | MS.gene81151:CDS |
GATGCGTTGATGTTACTCAG+AGG | 0.747828 | 6.1:+54551263 | MS.gene81151:CDS |
AAACAGCTTCAATAGCACTG+TGG | 0.754157 | 6.1:+54555181 | MS.gene81151:CDS |
ATGCAAGCAAGATATCCACA+TGG | 0.755097 | 6.1:-54561511 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 54550386 | 54563227 | 54550386 | ID=MS.gene81151 |
chr6.1 | mRNA | 54550386 | 54563227 | 54550386 | ID=MS.gene81151.t1;Parent=MS.gene81151 |
chr6.1 | exon | 54550386 | 54550545 | 54550386 | ID=MS.gene81151.t1.exon1;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54550386 | 54550545 | 54550386 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54551096 | 54551818 | 54551096 | ID=MS.gene81151.t1.exon2;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54551096 | 54551818 | 54551096 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54555171 | 54555214 | 54555171 | ID=MS.gene81151.t1.exon3;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54555171 | 54555214 | 54555171 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54555913 | 54555980 | 54555913 | ID=MS.gene81151.t1.exon4;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54555913 | 54555980 | 54555913 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54556094 | 54556178 | 54556094 | ID=MS.gene81151.t1.exon5;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54556094 | 54556178 | 54556094 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54556286 | 54556347 | 54556286 | ID=MS.gene81151.t1.exon6;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54556286 | 54556347 | 54556286 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54557430 | 54557505 | 54557430 | ID=MS.gene81151.t1.exon7;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54557430 | 54557505 | 54557430 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54557668 | 54557742 | 54557668 | ID=MS.gene81151.t1.exon8;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54557668 | 54557742 | 54557668 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54558227 | 54558298 | 54558227 | ID=MS.gene81151.t1.exon9;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54558227 | 54558298 | 54558227 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54558427 | 54558510 | 54558427 | ID=MS.gene81151.t1.exon10;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54558427 | 54558510 | 54558427 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54558596 | 54558664 | 54558596 | ID=MS.gene81151.t1.exon11;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54558596 | 54558664 | 54558596 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54558766 | 54558843 | 54558766 | ID=MS.gene81151.t1.exon12;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54558766 | 54558843 | 54558766 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54558958 | 54559046 | 54558958 | ID=MS.gene81151.t1.exon13;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54558958 | 54559046 | 54558958 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54559984 | 54560080 | 54559984 | ID=MS.gene81151.t1.exon14;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54559984 | 54560080 | 54559984 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54560157 | 54560210 | 54560157 | ID=MS.gene81151.t1.exon15;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54560157 | 54560210 | 54560157 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54560714 | 54560809 | 54560714 | ID=MS.gene81151.t1.exon16;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54560714 | 54560809 | 54560714 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54561431 | 54561619 | 54561431 | ID=MS.gene81151.t1.exon17;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54561431 | 54561619 | 54561431 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54561714 | 54561791 | 54561714 | ID=MS.gene81151.t1.exon18;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54561714 | 54561791 | 54561714 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54563013 | 54563057 | 54563013 | ID=MS.gene81151.t1.exon19;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54563013 | 54563057 | 54563013 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
chr6.1 | exon | 54563132 | 54563227 | 54563132 | ID=MS.gene81151.t1.exon20;Parent=MS.gene81151.t1 |
chr6.1 | CDS | 54563132 | 54563227 | 54563132 | ID=cds.MS.gene81151.t1;Parent=MS.gene81151.t1 |
Gene Sequence |
Protein sequence |