AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81291

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81291.t1 MTR_5g096390 98.830 684 8 0 1 684 1 684 0.0 1402
MS.gene81291.t1 MTR_1g054935 45.755 636 297 6 57 680 139 738 0.0 572
MS.gene81291.t1 MTR_1g054935 46.780 590 286 4 103 680 3 576 0.0 557
MS.gene81291.t1 MTR_7g106880 44.651 645 309 8 47 679 118 726 0.0 553
MS.gene81291.t1 MTR_1g054960 47.766 582 277 6 107 680 21 583 0.0 551
MS.gene81291.t1 MTR_7g106880 46.350 589 288 6 103 679 3 575 0.0 531
MS.gene81291.t1 MTR_2g079980 43.112 617 318 8 67 680 3 589 6.82e-174 509
MS.gene81291.t1 MTR_5g025470 44.089 626 308 7 64 680 44 636 1.39e-172 508
MS.gene81291.t1 MTR_8g059150 44.038 629 317 10 57 680 28 626 2.59e-168 496
MS.gene81291.t1 MTR_1g093990 42.628 624 332 8 64 680 56 660 1.41e-166 493
MS.gene81291.t1 MTR_1g096580 39.626 641 345 11 64 680 44 666 9.63e-154 460
MS.gene81291.t1 MTR_4g094060 34.552 547 314 19 104 627 68 593 6.26e-72 246
MS.gene81291.t1 MTR_4g094050 34.124 548 315 18 104 627 68 593 5.48e-70 242
MS.gene81291.t1 MTR_4g076970 31.516 587 339 16 72 616 1 566 7.10e-70 241
MS.gene81291.t1 MTR_1g108340 29.813 587 379 9 62 630 40 611 6.82e-69 239
MS.gene81291.t1 MTR_1g108340 29.813 587 379 9 62 630 40 611 6.98e-69 239
MS.gene81291.t1 MTR_8g093840 31.546 634 372 22 83 681 30 636 3.05e-67 233
MS.gene81291.t1 MTR_4g076940 35.491 448 270 10 107 541 51 492 2.92e-65 228
MS.gene81291.t1 MTR_4g076940 35.491 448 270 10 107 541 91 532 4.40e-65 229
MS.gene81291.t1 MTR_7g100120 27.886 667 411 18 11 625 5 653 5.43e-65 229
MS.gene81291.t1 MTR_4g116540 30.835 587 370 15 108 681 74 637 6.06e-65 226
MS.gene81291.t1 MTR_1g115790 30.500 600 369 18 63 626 72 659 1.03e-62 223
MS.gene81291.t1 MTR_4g076900 39.275 331 187 6 107 426 27 354 4.56e-62 219
MS.gene81291.t1 MTR_4g094090 30.811 555 330 17 100 627 22 549 1.63e-61 217
MS.gene81291.t1 MTR_6g066240 32.007 553 329 15 102 628 59 590 2.64e-61 218
MS.gene81291.t1 MTR_3g096410 30.731 602 369 19 107 681 56 636 1.21e-60 215
MS.gene81291.t1 MTR_4g094010 30.619 565 355 16 94 638 35 582 2.82e-60 214
MS.gene81291.t1 MTR_2g078080 30.983 539 321 16 107 629 48 551 2.97e-60 213
MS.gene81291.t1 MTR_3g463680 28.460 643 404 13 61 684 810 1415 1.27e-58 215
MS.gene81291.t1 MTR_3g463680 24.691 567 351 16 108 620 167 711 8.36e-31 130
MS.gene81291.t1 MTR_7g104100 27.603 605 379 16 56 637 836 1404 2.18e-57 211
MS.gene81291.t1 MTR_7g104100 25.654 573 329 22 109 616 182 722 6.61e-31 130
MS.gene81291.t1 MTR_1g094660 32.500 480 285 11 107 555 515 986 1.28e-56 208
MS.gene81291.t1 MTR_1g050525 27.965 565 360 13 61 611 861 1392 2.52e-55 205
MS.gene81291.t1 MTR_1g050525 24.460 556 357 17 109 616 176 716 1.87e-29 125
MS.gene81291.t1 MTR_7g104150 27.110 616 386 16 36 611 789 1381 2.63e-55 205
MS.gene81291.t1 MTR_7g104150 24.174 575 335 20 109 616 184 724 4.74e-26 115
MS.gene81291.t1 MTR_1g099570 27.820 665 380 26 58 683 3 606 3.38e-55 199
MS.gene81291.t1 MTR_1g094660 47.951 244 122 5 107 346 515 757 5.31e-55 202
MS.gene81291.t1 MTR_7g104110 27.000 600 377 15 50 611 797 1373 1.40e-54 203
MS.gene81291.t1 MTR_7g104110 23.227 564 354 14 109 616 178 718 1.80e-29 125
MS.gene81291.t1 MTR_4g054020 31.810 525 305 18 122 627 1 491 1.43e-53 194
MS.gene81291.t1 MTR_5g070320 28.598 542 331 13 109 624 858 1369 2.05e-53 199
MS.gene81291.t1 MTR_5g070320 25.557 583 346 20 108 629 168 723 3.00e-34 140
MS.gene81291.t1 MTR_5g070320 28.598 542 331 13 109 624 667 1178 2.29e-53 199
MS.gene81291.t1 MTR_5g070320 23.933 539 324 19 150 629 21 532 3.62e-23 105
MS.gene81291.t1 MTR_5g070320 28.598 542 331 13 109 624 571 1082 3.40e-53 198
MS.gene81291.t1 MTR_5g070320 23.983 467 304 16 196 637 4 444 7.76e-21 98.2
MS.gene81291.t1 MTR_7g098800 27.288 590 391 13 109 684 803 1368 1.90e-52 196
MS.gene81291.t1 MTR_7g098800 24.359 624 387 21 65 627 85 684 5.06e-31 130
MS.gene81291.t1 MTR_4g093845 29.422 554 341 16 100 627 50 579 3.33e-52 191
MS.gene81291.t1 MTR_7g104130 26.678 596 386 13 50 611 803 1381 5.42e-52 195
MS.gene81291.t1 MTR_7g104130 28.938 273 157 7 109 345 184 455 1.43e-25 113
MS.gene81291.t1 MTR_1g492950 27.290 513 339 10 109 606 894 1387 1.26e-51 194
MS.gene81291.t1 MTR_1g492950 31.752 274 148 7 109 345 189 460 8.25e-29 124
MS.gene81291.t1 MTR_1g011650 27.703 592 374 18 61 635 844 1398 1.51e-51 194
MS.gene81291.t1 MTR_1g011650 23.633 567 370 15 98 616 155 706 1.70e-27 119
MS.gene81291.t1 MTR_2g101090 27.505 549 330 15 109 625 871 1383 5.11e-51 192
MS.gene81291.t1 MTR_2g101090 24.225 516 282 17 108 563 178 644 6.94e-25 111
MS.gene81291.t1 MTR_4g076940 34.197 386 238 8 167 541 19 399 5.88e-51 187
MS.gene81291.t1 MTR_8g014360 27.808 543 336 13 109 625 905 1417 9.15e-51 191
MS.gene81291.t1 MTR_8g014360 24.417 557 368 14 108 621 177 723 3.55e-34 140
MS.gene81291.t1 MTR_7g104130 26.724 580 376 12 50 597 803 1365 1.36e-50 191
MS.gene81291.t1 MTR_7g104130 28.938 273 157 7 109 345 184 455 1.45e-25 113
MS.gene81291.t1 MTR_7g098760 26.909 550 367 12 109 643 880 1409 3.00e-50 190
MS.gene81291.t1 MTR_7g098760 30.986 284 159 8 98 345 151 433 4.29e-29 124
MS.gene81291.t1 MTR_8g107450 42.449 245 137 4 104 345 64 307 4.10e-50 187
MS.gene81291.t1 MTR_5g030910 45.082 244 129 5 103 343 45 286 5.57e-50 186
MS.gene81291.t1 MTR_4g123850 26.904 591 365 17 61 628 826 1372 3.16e-49 187
MS.gene81291.t1 MTR_4g123850 23.732 552 365 14 109 616 168 707 1.02e-30 130
MS.gene81291.t1 MTR_7g098780 26.580 538 354 14 109 628 845 1359 3.77e-49 186
MS.gene81291.t1 MTR_7g098780 28.882 322 192 6 61 345 125 446 1.96e-30 129
MS.gene81291.t1 MTR_4g011640 27.440 543 359 13 109 636 863 1385 1.64e-48 184
MS.gene81291.t1 MTR_4g011640 29.589 365 195 13 85 398 146 499 3.97e-32 134
MS.gene81291.t1 MTR_7g098750 26.829 533 359 12 109 628 613 1127 2.53e-48 184
MS.gene81291.t1 MTR_7g098750 22.426 437 302 14 211 629 28 445 9.11e-16 82.0
MS.gene81291.t1 MTR_4g113070 28.229 542 341 13 109 628 844 1359 3.70e-48 183
MS.gene81291.t1 MTR_4g113070 24.468 564 349 15 108 616 149 690 1.58e-25 113
MS.gene81291.t1 MTR_2g102660 27.440 543 363 12 109 638 855 1379 3.71e-48 183
MS.gene81291.t1 MTR_2g102660 24.671 608 377 18 98 648 156 739 1.41e-34 142
MS.gene81291.t1 MTR_2g102640 27.890 545 358 12 109 638 858 1382 3.72e-48 183
MS.gene81291.t1 MTR_2g102640 24.959 609 374 19 98 648 156 739 9.57e-34 139
MS.gene81291.t1 MTR_7g098750 26.829 533 359 12 109 628 883 1397 4.12e-48 183
MS.gene81291.t1 MTR_7g098750 24.144 584 372 19 98 629 151 715 1.68e-30 129
MS.gene81291.t1 MTR_1g011640 26.072 583 376 14 61 625 821 1366 1.10e-47 182
MS.gene81291.t1 MTR_1g011640 30.403 273 153 8 109 345 154 425 5.21e-24 108
MS.gene81291.t1 MTR_7g098750 26.923 520 348 12 109 614 883 1384 1.61e-47 181
MS.gene81291.t1 MTR_7g098750 24.144 584 372 19 98 629 151 715 1.30e-30 129
MS.gene81291.t1 MTR_2g102670 27.440 543 363 12 109 638 838 1362 1.74e-47 181
MS.gene81291.t1 MTR_2g102670 22.937 606 372 17 98 648 156 721 4.38e-28 121
MS.gene81291.t1 MTR_4g011630 27.656 546 356 16 109 636 866 1390 3.42e-47 181
MS.gene81291.t1 MTR_4g011630 29.880 415 222 14 88 451 152 548 2.11e-32 135
MS.gene81291.t1 MTR_7g098740 26.364 550 370 12 109 643 841 1370 3.58e-47 181
MS.gene81291.t1 MTR_7g098740 29.836 305 177 8 77 345 130 433 2.27e-30 129
MS.gene81291.t1 MTR_7g101780 31.006 487 291 13 105 555 510 987 4.12e-47 180
MS.gene81291.t1 MTR_8g014360 30.732 410 254 10 109 506 905 1296 4.54e-47 180
MS.gene81291.t1 MTR_8g014360 24.417 557 368 14 108 621 177 723 5.52e-34 140
MS.gene81291.t1 MTR_7g098370 26.316 551 359 14 109 638 841 1365 4.70e-47 180
MS.gene81291.t1 MTR_7g098370 30.640 297 166 9 85 345 141 433 3.85e-30 128
MS.gene81291.t1 MTR_3g107870 26.632 582 379 14 61 628 857 1404 1.78e-46 178
MS.gene81291.t1 MTR_3g107870 25.926 567 357 19 98 616 155 706 4.17e-34 140
MS.gene81291.t1 MTR_1g063920 29.652 489 297 13 105 559 489 964 4.15e-46 177
MS.gene81291.t1 MTR_4g011620 29.583 480 288 15 109 560 856 1313 7.74e-46 176
MS.gene81291.t1 MTR_4g011620 24.437 577 373 16 100 628 152 713 9.33e-32 133
MS.gene81291.t1 MTR_4g058000 30.550 491 290 11 105 555 503 982 3.30e-45 174
MS.gene81291.t1 MTR_7g098320 26.143 547 367 12 108 638 874 1399 3.41e-45 174
MS.gene81291.t1 MTR_7g098320 30.847 295 167 8 87 345 136 429 1.09e-29 126
MS.gene81291.t1 MTR_7g098300 26.630 552 362 13 109 643 879 1404 1.79e-44 172
MS.gene81291.t1 MTR_7g098300 31.408 277 153 8 105 345 158 433 5.47e-29 124
MS.gene81291.t1 MTR_3g040670 42.857 245 130 7 129 367 201 441 5.07e-42 159
MS.gene81291.t1 MTR_7g098320 27.913 412 263 10 109 506 875 1266 1.02e-39 157
MS.gene81291.t1 MTR_7g098320 30.847 295 167 8 87 345 136 429 1.40e-29 126
MS.gene81291.t1 MTR_2g095390 30.562 409 238 14 46 415 55 456 1.56e-38 152
MS.gene81291.t1 MTR_7g098890 26.268 552 338 19 108 627 783 1297 1.39e-34 142
MS.gene81291.t1 MTR_7g098890 29.795 292 180 12 61 331 86 373 9.94e-24 107
MS.gene81291.t1 MTR_4g089130 51.923 104 39 1 224 327 1 93 8.66e-27 105
MS.gene81291.t1 MTR_7g407080 22.727 506 312 15 125 609 128 575 5.12e-25 110
MS.gene81291.t1 MTR_8g103450 29.066 289 157 10 8 291 162 407 2.82e-23 103
MS.gene81291.t1 MTR_1567s0010 31.282 195 121 6 117 308 250 434 3.44e-20 94.4
MS.gene81291.t1 MTR_7g060570 30.932 236 118 7 119 350 938 1132 8.29e-19 92.0
MS.gene81291.t1 MTR_7g091350 53.750 80 37 0 232 311 81 160 3.36e-17 79.7
MS.gene81291.t1 MTR_4g109720 31.754 211 131 9 109 314 404 606 5.00e-17 85.5
MS.gene81291.t1 MTR_7g079540 30.435 230 130 8 107 314 98 319 7.65e-17 82.8
MS.gene81291.t1 MTR_3g086430 29.310 232 146 8 107 328 1016 1239 9.79e-17 85.1
MS.gene81291.t1 MTR_7g033710 30.357 224 126 11 109 318 442 649 1.04e-16 84.7
MS.gene81291.t1 MTR_5g075955 30.660 212 135 7 107 314 367 570 7.34e-16 81.6
MS.gene81291.t1 MTR_5g075960 30.660 212 135 7 107 314 481 684 8.31e-16 81.6
MS.gene81291.t1 MTR_5g075955 30.660 212 135 7 107 314 479 682 1.02e-15 81.6
MS.gene81291.t1 MTR_3g093430 30.201 298 176 15 107 393 379 655 2.29e-15 80.9
MS.gene81291.t1 MTR_8g022270 26.645 304 189 11 109 399 615 897 1.84e-14 77.8
MS.gene81291.t1 MTR_8g022270 30.093 216 138 8 108 319 1258 1464 3.62e-12 70.5
MS.gene81291.t1 MTR_7g079540 30.144 209 117 7 107 293 98 299 1.88e-14 75.1
MS.gene81291.t1 MTR_7g102070 32.039 206 126 8 109 309 443 639 2.71e-14 77.4
MS.gene81291.t1 MTR_6g009080 29.245 212 134 7 108 309 229 434 3.30e-14 75.9
MS.gene81291.t1 MTR_1g059830 31.507 219 122 9 103 308 390 593 4.68e-14 75.9
MS.gene81291.t1 MTR_6g008820 29.384 211 136 7 109 314 806 1008 7.45e-14 75.9
MS.gene81291.t1 MTR_6g008820 29.384 211 136 7 109 314 698 900 7.74e-14 75.9
MS.gene81291.t1 MTR_6g008820 28.378 222 147 7 109 326 44 257 9.49e-11 65.9
MS.gene81291.t1 MTR_6g008820 29.384 211 136 7 109 314 890 1092 8.01e-14 75.9
MS.gene81291.t1 MTR_6g008820 28.378 222 147 7 109 326 236 449 9.60e-11 65.9
MS.gene81291.t1 MTR_6g008820 29.384 211 136 7 109 314 1020 1222 8.32e-14 75.9
MS.gene81291.t1 MTR_1g063170 32.039 206 126 9 109 309 416 612 3.02e-13 73.9
MS.gene81291.t1 MTR_1g025560 31.771 192 117 7 108 293 1010 1193 3.04e-13 73.9
MS.gene81291.t1 MTR_6g008800 28.436 211 135 7 109 309 1024 1228 3.66e-13 73.6
MS.gene81291.t1 MTR_6g008800 30.890 191 118 7 109 293 378 560 2.77e-11 67.8
MS.gene81291.t1 MTR_4g108153 28.646 192 126 5 101 289 582 765 4.00e-13 73.6
MS.gene81291.t1 MTR_5g033080 26.364 220 141 8 109 318 298 506 4.25e-13 72.8
MS.gene81291.t1 MTR_5g029750 29.310 232 146 10 74 293 330 555 4.54e-13 73.6
MS.gene81291.t1 MTR_5g029750 29.048 210 137 8 109 314 1006 1207 1.08e-11 68.9
MS.gene81291.t1 MTR_5g033080 26.364 220 141 8 109 318 473 681 4.72e-13 72.8
MS.gene81291.t1 MTR_6g009150 28.910 211 134 7 109 309 1034 1238 5.39e-13 73.2
MS.gene81291.t1 MTR_6g009150 30.049 203 129 7 98 293 365 561 1.22e-11 68.9
MS.gene81291.t1 MTR_3g107800 28.750 240 151 9 109 338 413 642 9.91e-13 72.4
MS.gene81291.t1 MTR_6g009200 29.245 212 136 7 109 314 1037 1240 1.01e-12 72.4
MS.gene81291.t1 MTR_6g009200 31.461 178 112 6 120 293 389 560 4.26e-11 67.0
MS.gene81291.t1 MTR_6g009030 28.910 211 134 7 109 309 1016 1220 1.34e-12 72.0
MS.gene81291.t1 MTR_6g009030 30.526 190 122 6 108 293 377 560 2.00e-11 68.2
MS.gene81291.t1 MTR_6g009070 27.459 244 157 10 109 342 951 1184 2.19e-12 71.2
MS.gene81291.t1 MTR_6g009070 29.412 221 140 7 83 293 286 500 2.59e-11 67.8
MS.gene81291.t1 MTR_4g108163 28.272 191 126 5 102 289 613 795 2.38e-12 70.9
MS.gene81291.t1 MTR_4g108170 27.723 202 134 6 120 318 628 820 3.74e-12 70.1
MS.gene81291.t1 MTR_6g009110 29.864 221 139 8 83 293 353 567 3.86e-12 70.5
MS.gene81291.t1 MTR_6g009110 28.302 212 138 7 109 314 1035 1238 7.58e-12 69.3
MS.gene81291.t1 MTR_6g009090 32.044 181 112 7 118 293 401 575 4.24e-12 69.7
MS.gene81291.t1 MTR_1309s0010 27.419 248 153 9 71 309 408 637 4.38e-12 69.7
MS.gene81291.t1 MTR_4g081190 29.897 194 120 8 107 293 1005 1189 4.90e-12 70.1
MS.gene81291.t1 MTR_4g108240 27.225 191 128 5 102 289 625 807 1.10e-11 68.9
MS.gene81291.t1 MTR_3g099990 28.495 186 116 6 110 289 545 719 1.14e-11 68.6
MS.gene81291.t1 MTR_4g124050 31.604 212 129 8 109 314 413 614 1.53e-11 68.6
MS.gene81291.t1 MTR_7g091380 30.201 149 94 3 120 266 583 723 1.66e-11 68.6
MS.gene81291.t1 MTR_4g124050 31.604 212 129 8 109 314 413 614 1.85e-11 68.2
MS.gene81291.t1 MTR_4g124050 30.000 210 121 10 98 293 1053 1250 9.39e-11 65.9
MS.gene81291.t1 MTR_7g091380 30.201 149 94 3 120 266 381 521 1.87e-11 68.2
MS.gene81291.t1 MTR_7g091380 30.201 149 94 3 120 266 583 723 1.99e-11 68.2
MS.gene81291.t1 MTR_7g091380 30.201 149 94 3 120 266 401 541 2.02e-11 68.2
MS.gene81291.t1 MTR_4g123990 29.245 212 134 8 109 314 395 596 4.69e-11 67.0
MS.gene81291.t1 MTR_3g080220 29.018 224 141 8 107 320 410 625 5.21e-11 66.6
MS.gene81291.t1 MTR_4g108240 26.984 189 127 5 102 287 625 805 7.77e-11 65.9
MS.gene81291.t1 MTR_3g437990 28.108 185 118 5 110 289 545 719 8.06e-11 65.9
MS.gene81291.t1 MTR_1g099280 24.490 245 161 10 67 308 595 818 9.67e-11 65.9
MS.gene81291.t1 MTR_6g011680 28.571 189 125 6 109 293 1025 1207 9.88e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81291.t1 AT3G13220 72.455 668 177 5 23 684 16 682 0.0 1000
MS.gene81291.t1 AT5G06530 43.578 654 305 8 47 680 137 746 0.0 557
MS.gene81291.t1 AT5G06530 43.578 654 305 8 47 680 137 746 0.0 557
MS.gene81291.t1 AT1G31770 44.839 620 314 7 64 680 50 644 3.40e-176 517
MS.gene81291.t1 AT5G06530 44.768 583 274 7 47 609 137 691 8.06e-175 515
MS.gene81291.t1 AT3G25620 43.153 628 323 9 64 679 65 670 1.13e-165 491
MS.gene81291.t1 AT4G27420 40.611 655 350 8 41 680 1 631 8.80e-164 485
MS.gene81291.t1 AT5G06530 46.230 504 243 5 126 609 1 496 2.74e-160 471
MS.gene81291.t1 AT1G71960 38.923 650 359 12 53 680 26 659 9.48e-149 447
MS.gene81291.t1 AT3G25620 44.794 413 203 7 64 468 65 460 4.37e-109 338
MS.gene81291.t1 AT2G01320 30.810 568 370 10 70 627 51 605 2.79e-79 265
MS.gene81291.t1 AT2G01320 30.810 568 370 10 70 627 51 605 2.79e-79 265
MS.gene81291.t1 AT2G01320 30.810 568 370 10 70 627 51 605 1.74e-78 265
MS.gene81291.t1 AT2G01320 30.810 568 370 10 70 627 51 605 1.83e-78 265
MS.gene81291.t1 AT2G01320 30.810 568 370 10 70 627 51 605 1.89e-78 265
MS.gene81291.t1 AT2G01320 30.810 568 370 10 70 627 51 605 1.89e-78 265
MS.gene81291.t1 AT2G13610 32.051 624 384 17 77 679 32 636 4.44e-75 254
MS.gene81291.t1 AT2G01320 31.743 482 308 9 70 543 51 519 3.38e-70 238
MS.gene81291.t1 AT2G01320 31.743 482 308 9 70 543 51 519 3.38e-70 238
MS.gene81291.t1 AT3G21090 31.424 611 356 18 107 679 43 628 1.69e-66 232
MS.gene81291.t1 AT2G37360 27.393 679 402 16 64 678 95 746 4.07e-65 229
MS.gene81291.t1 AT3G55100 28.047 681 403 18 50 678 8 653 7.20e-62 219
MS.gene81291.t1 AT3G55100 28.047 681 403 18 50 678 8 653 7.20e-62 219
MS.gene81291.t1 AT3G53510 28.391 634 365 15 107 678 124 730 9.69e-62 220
MS.gene81291.t1 AT1G51500 30.629 604 339 19 50 616 1 561 3.48e-61 217
MS.gene81291.t1 AT3G55130 28.777 695 371 23 62 678 68 716 3.93e-61 218
MS.gene81291.t1 AT3G55110 30.127 551 348 13 107 637 89 622 5.72e-61 217
MS.gene81291.t1 AT3G53480 29.098 543 346 11 103 628 871 1391 5.03e-60 219
MS.gene81291.t1 AT3G53480 24.370 595 339 22 85 609 165 718 4.49e-29 124
MS.gene81291.t1 AT1G51460 31.009 545 324 11 107 616 28 555 5.17e-60 214
MS.gene81291.t1 AT3G55090 29.147 645 368 21 104 678 102 727 1.12e-59 214
MS.gene81291.t1 AT2G39350 29.821 560 336 15 105 626 105 645 5.85e-59 212
MS.gene81291.t1 AT4G25750 29.125 594 352 20 109 683 30 573 2.09e-58 207
MS.gene81291.t1 AT1G17840 30.864 567 315 18 103 628 63 593 2.97e-58 209
MS.gene81291.t1 AT1G53270 31.203 532 323 14 107 628 48 546 6.67e-58 206
MS.gene81291.t1 AT1G59870 29.027 596 375 15 61 642 861 1422 1.75e-57 212
MS.gene81291.t1 AT1G59870 25.786 636 365 22 108 673 185 783 1.73e-37 151
MS.gene81291.t1 AT4G15230 29.250 547 353 12 97 628 814 1341 2.02e-57 211
MS.gene81291.t1 AT4G15230 31.502 273 150 7 109 345 156 427 4.37e-32 134
MS.gene81291.t1 AT4G15230 29.250 547 353 12 97 628 814 1341 2.02e-57 211
MS.gene81291.t1 AT4G15230 31.502 273 150 7 109 345 156 427 4.37e-32 134
MS.gene81291.t1 AT4G15230 29.250 547 353 12 97 628 735 1262 3.49e-57 211
MS.gene81291.t1 AT4G15230 31.502 273 150 7 109 345 77 348 4.42e-32 134
MS.gene81291.t1 AT5G13580 28.531 708 397 23 42 678 49 718 1.05e-56 206
MS.gene81291.t1 AT4G15233 27.121 601 382 12 42 628 775 1333 3.50e-56 207
MS.gene81291.t1 AT4G15233 29.651 344 196 12 42 345 89 426 9.29e-31 130
MS.gene81291.t1 AT4G15233 27.121 601 382 12 42 628 713 1271 3.57e-56 207
MS.gene81291.t1 AT4G15233 29.651 344 196 12 42 345 27 364 9.13e-31 130
MS.gene81291.t1 AT4G15233 27.121 601 382 12 42 628 713 1271 3.57e-56 207
MS.gene81291.t1 AT4G15233 29.651 344 196 12 42 345 27 364 9.13e-31 130
MS.gene81291.t1 AT3G16340 29.368 538 339 10 109 628 836 1350 4.10e-56 207
MS.gene81291.t1 AT3G16340 25.445 562 349 17 108 620 161 701 1.27e-30 129
MS.gene81291.t1 AT4G15233 27.121 601 382 12 42 628 757 1315 4.45e-56 207
MS.gene81291.t1 AT4G15233 30.675 326 198 11 42 345 89 408 1.37e-32 135
MS.gene81291.t1 AT4G15233 27.121 601 382 12 42 628 766 1324 4.52e-56 207
MS.gene81291.t1 AT4G15233 28.488 344 191 13 42 345 89 417 1.92e-26 116
MS.gene81291.t1 AT3G16340 29.368 538 339 10 109 628 841 1355 4.77e-56 207
MS.gene81291.t1 AT3G16340 25.933 563 350 18 108 620 161 706 2.93e-32 134
MS.gene81291.t1 AT2G29940 30.754 517 324 12 109 610 853 1350 5.30e-56 207
MS.gene81291.t1 AT2G29940 25.433 578 353 19 108 629 174 729 1.78e-33 138
MS.gene81291.t1 AT4G15236 27.121 601 382 12 42 628 773 1331 7.96e-56 207
MS.gene81291.t1 AT4G15236 24.801 629 396 21 43 616 86 692 1.17e-33 139
MS.gene81291.t1 AT2G37010 30.179 613 357 20 105 678 496 1076 1.18e-55 206
MS.gene81291.t1 AT2G37010 30.179 613 357 20 105 678 496 1076 1.18e-55 206
MS.gene81291.t1 AT2G37280 26.852 540 362 10 103 628 863 1383 2.19e-55 205
MS.gene81291.t1 AT2G37280 22.660 609 358 18 85 606 130 712 1.23e-28 123
MS.gene81291.t1 AT2G37280 26.852 540 362 10 103 628 834 1354 2.37e-55 205
MS.gene81291.t1 AT2G37280 24.071 565 345 18 100 606 145 683 4.63e-32 134
MS.gene81291.t1 AT2G37280 26.439 556 376 10 103 644 676 1212 2.94e-55 205
MS.gene81291.t1 AT2G37280 23.704 540 328 18 125 606 12 525 6.49e-28 120
MS.gene81291.t1 AT3G30842 26.758 583 377 14 61 628 815 1362 8.57e-55 204
MS.gene81291.t1 AT3G30842 24.382 607 386 22 65 615 111 700 3.63e-34 140
MS.gene81291.t1 AT1G66950 27.444 583 375 12 42 606 821 1373 1.14e-54 203
MS.gene81291.t1 AT1G66950 23.273 666 419 20 71 673 152 788 4.74e-31 130
MS.gene81291.t1 AT1G15210 28.183 589 361 16 61 628 834 1381 2.04e-54 202
MS.gene81291.t1 AT1G15210 23.975 634 383 19 44 620 137 728 5.28e-33 137
MS.gene81291.t1 AT2G36380 28.625 531 319 13 109 611 879 1377 4.97e-54 201
MS.gene81291.t1 AT2G36380 23.645 664 427 17 71 677 150 790 7.92e-35 142
MS.gene81291.t1 AT4G15233 26.635 627 376 15 42 628 775 1357 1.40e-53 200
MS.gene81291.t1 AT4G15233 29.651 344 196 12 42 345 89 426 1.33e-30 129
MS.gene81291.t1 AT5G52860 28.099 605 342 21 109 683 44 585 9.31e-53 192
MS.gene81291.t1 AT2G26910 27.768 587 392 10 109 681 845 1413 1.11e-52 197
MS.gene81291.t1 AT2G26910 25.040 619 376 20 65 616 93 690 4.60e-31 130
MS.gene81291.t1 AT4G15215 30.364 550 343 14 97 628 801 1328 1.42e-52 197
MS.gene81291.t1 AT4G15215 29.781 319 178 8 65 345 104 414 1.25e-32 135
MS.gene81291.t1 AT4G15215 30.364 550 343 14 97 628 801 1328 1.42e-52 197
MS.gene81291.t1 AT4G15215 29.781 319 178 8 65 345 104 414 1.25e-32 135
MS.gene81291.t1 AT4G15215 30.364 550 343 14 97 628 801 1328 1.42e-52 197
MS.gene81291.t1 AT4G15215 29.781 319 178 8 65 345 104 414 1.25e-32 135
MS.gene81291.t1 AT4G15215 30.364 550 343 14 97 628 801 1328 1.42e-52 197
MS.gene81291.t1 AT4G15215 29.781 319 178 8 65 345 104 414 1.25e-32 135
MS.gene81291.t1 AT4G15215 30.364 550 343 14 97 628 811 1338 1.63e-52 197
MS.gene81291.t1 AT4G15215 30.938 320 180 9 65 345 107 424 1.12e-34 142
MS.gene81291.t1 AT4G15215 30.364 550 343 14 97 628 804 1331 1.70e-52 197
MS.gene81291.t1 AT4G15215 29.781 319 178 8 65 345 107 417 1.33e-32 135
MS.gene81291.t1 AT4G15215 30.364 550 343 14 97 628 808 1335 2.04e-52 196
MS.gene81291.t1 AT4G15215 30.938 320 180 9 65 345 104 421 1.25e-34 142
MS.gene81291.t1 AT4G15215 30.364 550 343 14 97 628 808 1335 2.04e-52 196
MS.gene81291.t1 AT4G15215 30.938 320 180 9 65 345 104 421 1.25e-34 142
MS.gene81291.t1 AT4G15215 30.364 550 343 14 97 628 808 1335 2.04e-52 196
MS.gene81291.t1 AT4G15215 30.938 320 180 9 65 345 104 421 1.25e-34 142
MS.gene81291.t1 AT4G15215 30.364 550 343 14 97 628 808 1335 2.04e-52 196
MS.gene81291.t1 AT4G15215 30.938 320 180 9 65 345 104 421 1.25e-34 142
MS.gene81291.t1 AT4G15215 30.364 550 343 14 97 628 808 1335 2.04e-52 196
MS.gene81291.t1 AT4G15215 30.938 320 180 9 65 345 104 421 1.25e-34 142
MS.gene81291.t1 AT4G15230 28.902 519 335 11 97 602 814 1311 2.06e-52 196
MS.gene81291.t1 AT4G15230 31.502 273 150 7 109 345 156 427 7.51e-32 133
MS.gene81291.t1 AT4G15233 28.096 541 354 13 103 628 670 1190 3.63e-52 196
MS.gene81291.t1 AT4G15233 30.675 326 198 11 42 345 27 346 1.18e-32 135
MS.gene81291.t1 AT4G15233 28.096 541 354 13 103 628 670 1190 3.63e-52 196
MS.gene81291.t1 AT4G15233 30.675 326 198 11 42 345 27 346 1.18e-32 135
MS.gene81291.t1 AT2G37280 27.680 513 336 11 103 602 834 1324 7.20e-52 195
MS.gene81291.t1 AT2G37280 24.071 565 345 18 100 606 145 683 5.61e-32 134
MS.gene81291.t1 AT1G15520 27.903 534 352 11 109 628 852 1366 1.37e-51 194
MS.gene81291.t1 AT1G15520 25.550 591 355 21 96 627 156 720 1.94e-34 141
MS.gene81291.t1 AT5G19410 29.118 601 358 22 105 681 62 618 5.47e-51 187
MS.gene81291.t1 AT5G19410 29.118 601 358 22 105 681 71 627 5.76e-51 187
MS.gene81291.t1 AT1G53390 31.064 470 281 10 107 543 521 980 1.47e-50 191
MS.gene81291.t1 AT5G60740 31.818 484 295 10 105 555 511 992 4.54e-48 183
MS.gene81291.t1 AT1G15520 28.979 421 269 9 109 517 852 1254 2.37e-44 172
MS.gene81291.t1 AT1G15520 25.550 591 355 21 96 627 156 720 1.46e-34 142
MS.gene81291.t1 AT2G28070 25.741 641 428 17 61 679 94 708 1.26e-41 162
MS.gene81291.t1 AT2G28070 25.741 641 428 17 61 679 94 708 1.26e-41 162
MS.gene81291.t1 AT5G39040 33.333 204 125 6 109 308 413 609 2.66e-17 86.7
MS.gene81291.t1 AT1G65410 30.435 230 130 8 107 314 97 318 5.44e-17 83.6
MS.gene81291.t1 AT3G47750 26.160 237 150 8 87 308 602 828 4.03e-15 80.1
MS.gene81291.t1 AT4G28620 30.660 212 135 8 107 314 452 655 8.37e-15 78.6
MS.gene81291.t1 AT5G58270 29.245 212 138 6 107 314 492 695 1.24e-14 78.2
MS.gene81291.t1 AT4G25960 30.516 213 124 9 116 318 425 623 2.46e-14 77.4
MS.gene81291.t1 AT4G25960 31.188 202 127 8 120 317 1058 1251 3.67e-11 67.4
MS.gene81291.t1 AT3G47790 24.434 221 155 5 101 318 598 809 5.49e-14 76.3
MS.gene81291.t1 AT1G70610 26.638 229 129 7 109 318 291 499 1.09e-13 74.7
MS.gene81291.t1 AT1G70610 26.638 229 129 7 109 318 472 680 1.11e-13 75.1
MS.gene81291.t1 AT5G61700 25.000 228 148 6 77 289 572 791 1.29e-13 75.1
MS.gene81291.t1 AT5G61700 25.000 228 148 6 77 289 572 791 1.29e-13 75.1
MS.gene81291.t1 AT3G28390 29.365 252 156 10 77 315 959 1201 1.52e-13 75.1
MS.gene81291.t1 AT3G28390 29.952 207 131 9 120 321 375 572 5.88e-13 73.2
MS.gene81291.t1 AT5G61690 29.319 191 107 8 110 289 548 721 1.96e-13 74.3
MS.gene81291.t1 AT3G47730 28.796 191 109 7 110 289 547 721 2.53e-13 74.3
MS.gene81291.t1 AT3G28415 30.332 211 135 8 109 314 1001 1204 2.87e-13 73.9
MS.gene81291.t1 AT3G28415 31.579 209 131 8 117 321 371 571 1.84e-12 71.6
MS.gene81291.t1 AT1G10680 32.086 187 105 8 117 293 386 560 2.88e-13 73.9
MS.gene81291.t1 AT3G28415 30.332 211 135 8 109 314 993 1196 3.25e-13 73.9
MS.gene81291.t1 AT3G28415 31.579 209 131 8 117 321 363 563 2.07e-12 71.2
MS.gene81291.t1 AT1G10680 32.086 187 105 8 117 293 386 560 3.34e-13 73.9
MS.gene81291.t1 AT1G10680 30.653 199 126 7 120 314 1010 1200 3.28e-11 67.4
MS.gene81291.t1 AT5G61730 30.481 187 111 7 110 289 539 713 3.34e-13 73.6
MS.gene81291.t1 AT5G61730 30.481 187 111 7 110 289 549 723 3.36e-13 73.6
MS.gene81291.t1 AT1G27940 28.505 214 141 7 109 318 1021 1226 3.44e-13 73.9
MS.gene81291.t1 AT1G27940 31.250 208 123 11 109 308 388 583 1.87e-12 71.6
MS.gene81291.t1 AT1G27940 28.505 214 141 7 109 318 807 1012 3.51e-13 73.6
MS.gene81291.t1 AT1G27940 31.250 208 123 11 109 308 174 369 2.18e-12 71.2
MS.gene81291.t1 AT3G47790 24.000 225 155 5 75 296 572 783 3.70e-13 73.6
MS.gene81291.t1 AT5G61690 28.272 191 110 7 110 289 548 722 4.06e-13 73.6
MS.gene81291.t1 AT3G47790 24.000 225 155 5 75 296 453 664 4.17e-13 73.2
MS.gene81291.t1 AT5G61740 26.877 253 167 9 70 318 538 776 4.84e-13 73.2
MS.gene81291.t1 AT5G61740 26.877 253 167 9 70 318 572 810 4.85e-13 73.2
MS.gene81291.t1 AT5G61740 26.877 253 167 9 70 318 433 671 5.78e-13 72.8
MS.gene81291.t1 AT4G28630 28.774 212 139 8 107 314 450 653 5.99e-13 72.8
MS.gene81291.t1 AT3G28345 32.778 180 107 7 120 293 387 558 6.37e-13 73.2
MS.gene81291.t1 AT3G28345 30.357 224 144 7 109 324 1012 1231 1.10e-11 68.9
MS.gene81291.t1 AT1G28010 30.435 207 126 10 109 308 389 584 1.11e-12 72.0
MS.gene81291.t1 AT1G28010 28.972 214 140 8 109 318 1023 1228 2.34e-12 71.2
MS.gene81291.t1 AT3G28380 31.280 211 133 8 108 314 375 577 2.15e-12 71.2
MS.gene81291.t1 AT3G28380 30.000 220 134 10 117 324 1020 1231 6.62e-11 66.6
MS.gene81291.t1 AT3G47770 26.190 210 143 6 102 308 597 797 2.66e-12 70.9
MS.gene81291.t1 AT2G36910 30.583 206 129 8 109 309 385 581 3.24e-12 70.9
MS.gene81291.t1 AT3G47740 24.153 236 156 7 87 308 597 823 4.37e-12 70.1
MS.gene81291.t1 AT3G47770 26.190 210 143 6 102 308 623 823 4.75e-12 70.1
MS.gene81291.t1 AT3G62150 28.302 212 136 7 109 314 420 621 7.98e-12 69.3
MS.gene81291.t1 AT3G62150 28.302 212 136 7 109 314 420 621 7.98e-12 69.3
MS.gene81291.t1 AT3G62150 28.302 212 136 7 109 314 420 621 7.98e-12 69.3
MS.gene81291.t1 AT2G41700 25.641 195 129 7 101 289 1423 1607 1.66e-11 68.6
MS.gene81291.t1 AT2G41700 26.180 233 147 9 41 266 434 648 2.57e-11 67.8
MS.gene81291.t1 AT2G41700 25.641 195 129 7 101 289 1465 1649 1.79e-11 68.6
MS.gene81291.t1 AT2G41700 26.180 233 147 9 41 266 504 718 3.14e-11 67.8
MS.gene81291.t1 AT5G46540 28.571 217 129 9 109 314 374 575 4.63e-11 67.0
MS.gene81291.t1 AT5G46540 32.934 167 80 6 116 266 1029 1179 9.33e-11 65.9

Find 135 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTCTACATTTGCATATTT+TGG 0.095054 5.2:+80823343 MS.gene81291:CDS
GGCTCTTTGCTTTCGGTTCT+TGG 0.111838 5.2:+80824374 MS.gene81291:CDS
CTTGGAATTGCACTTCTATT+AGG 0.177019 5.2:+80823088 MS.gene81291:CDS
GAAGGCTCTCCTGTTTATTA+TGG 0.192438 5.2:+80822588 MS.gene81291:CDS
CGGCGAAATTCTTGCTTTGA+TGG 0.209208 5.2:+80821744 MS.gene81291:CDS
GCTGGATTCATTGGTATTTC+CGG 0.213071 5.2:-80822657 None:intergenic
CTTATGTTATTCCTTCTTAC+AGG 0.228543 5.2:+80823780 MS.gene81291:CDS
ACTCAAGTATAAAGACATTT+TGG 0.230089 5.2:+80822886 MS.gene81291:CDS
TTTGACATCATTGTCTTTAC+AGG 0.238405 5.2:-80821643 None:intergenic
CATGCTTATTGTGTACTTCA+TGG 0.253005 5.2:+80823521 MS.gene81291:CDS
CTTCTAAAAGTGCAATATTC+AGG 0.260030 5.2:+80824234 MS.gene81291:CDS
TGCTAGACACACACCTTTCT+AGG 0.276132 5.2:-80822130 None:intergenic
CATTCATGTACTATGGATTC+AGG 0.279268 5.2:+80824208 MS.gene81291:CDS
CCCTTCAGTGGCGATTATTA+AGG 0.290816 5.2:+80822764 MS.gene81291:CDS
CTGGATTCATTGGTATTTCC+GGG 0.294967 5.2:-80822656 None:intergenic
TTGGAATTGCACTTCTATTA+GGG 0.313501 5.2:+80823089 MS.gene81291:CDS
ACATCTTCAACTAGCTATTC+AGG 0.321562 5.2:+80822955 MS.gene81291:CDS
AAGGTGGCTTAAGTGAAGTT+TGG 0.323854 5.2:+80824337 MS.gene81291:CDS
CTTGCTTTGATGGGTCCTTC+TGG 0.338717 5.2:+80821754 MS.gene81291:CDS
CGCTTTCACATTCATATAGT+TGG 0.341387 5.2:-80824260 None:intergenic
ACTAGCTATTCAGGTCAAAA+AGG 0.345576 5.2:+80822964 MS.gene81291:CDS
TGATCTTCTCTGCATTCTTA+AGG 0.348445 5.2:+80822042 MS.gene81291:CDS
TACATGTCATTCATGTACTA+TGG 0.353628 5.2:+80824201 MS.gene81291:CDS
TTCTTGCTTGACTTGGCAAC+TGG 0.354225 5.2:+80822684 MS.gene81291:CDS
TCTTATAAAGAATGGTGAAT+TGG 0.356972 5.2:-80823009 None:intergenic
TAGCCATGGCTCTTTGCTTT+CGG 0.358126 5.2:+80824367 MS.gene81291:CDS
AAGAATTCTGCTGGATTCAT+TGG 0.359339 5.2:-80822666 None:intergenic
TTCACTACCTTGAGATATAC+AGG 0.361221 5.2:-80821066 None:intergenic
CACTTCTATTAGGGCTACTT+TGG 0.361800 5.2:+80823098 MS.gene81291:CDS
AAACTTCTTCTCACTCTTCA+AGG 0.370422 5.2:+80822394 MS.gene81291:CDS
AGCAGAATTCTTGCTTGACT+TGG 0.376774 5.2:+80822677 MS.gene81291:CDS
GTTGGTTCCATGCAGATTGC+AGG 0.381171 5.2:+80820934 MS.gene81291:CDS
ATAGCTAGTTGAAGATGTTT+TGG 0.386185 5.2:-80822950 None:intergenic
AAGGCTCTCCTGTTTATTAT+GGG 0.387461 5.2:+80822589 MS.gene81291:CDS
GGATATCTCAAAGGAATATC+AGG 0.392776 5.2:+80822268 MS.gene81291:CDS
ATGCAGATTGCAGGAAGCTT+TGG 0.396748 5.2:+80820943 MS.gene81291:CDS
ACAACCTTGTTAAGAGTTGT+AGG 0.411458 5.2:+80821787 MS.gene81291:CDS
CTACTTGATGAGCCAACTTC+AGG 0.414761 5.2:+80822349 MS.gene81291:CDS
TTCAACCATTGCATGAACTT+TGG 0.419064 5.2:-80824177 None:intergenic
CTAGCCTTCCCATAATAAAC+AGG 0.420381 5.2:-80822597 None:intergenic
TTCTATTAGGGCTACTTTGG+TGG 0.423031 5.2:+80823101 MS.gene81291:CDS
CTTATTGTGTACTTCATGGC+TGG 0.423664 5.2:+80823525 MS.gene81291:CDS
TTGAGATTGGTTCAAGCACT+TGG 0.426645 5.2:+80823070 MS.gene81291:CDS
GGCGAAATTCTTGCTTTGAT+GGG 0.427925 5.2:+80821745 MS.gene81291:CDS
TTTCTTCAACTGTAAGTTGT+GGG 0.436204 5.2:-80822016 None:intergenic
GAGAATACTATCAAGGATCT+AGG 0.450601 5.2:+80822107 MS.gene81291:CDS
TTGATGGGTCCTTCTGGTAG+TGG 0.455405 5.2:+80821760 MS.gene81291:CDS
CTCAGGCATACCTTCACAAT+AGG 0.457158 5.2:+80820986 MS.gene81291:CDS
TTCATCCTTGAGGTTCGTCC+CGG 0.463028 5.2:+80822638 MS.gene81291:CDS
TCGGAGTTGAGCCTCTGTAT+TGG 0.465444 5.2:-80823134 None:intergenic
AAGAAGTTTGTTTGCTGAGG+TGG 0.466943 5.2:-80822380 None:intergenic
AGATTACTTGATAATGTAAA+GGG 0.470567 5.2:+80821814 MS.gene81291:CDS
CTATGTATTTCCATTTGAAA+AGG 0.471059 5.2:+80823392 MS.gene81291:CDS
AACATATAGAGCAAGATTCA+AGG 0.476898 5.2:+80823033 MS.gene81291:CDS
CATCAAAGCAAGAATTTCGC+CGG 0.479651 5.2:-80821743 None:intergenic
AAGATTACTTGATAATGTAA+AGG 0.483097 5.2:+80821813 MS.gene81291:CDS
ATATGTTCTCTTATAAAGAA+TGG 0.484237 5.2:-80823017 None:intergenic
TCATCTTTCAAAATATCTTG+TGG 0.484681 5.2:-80822729 None:intergenic
TTTGATACTGTAAACTTGAA+AGG 0.485964 5.2:+80824318 MS.gene81291:CDS
AAGTCAAGCAAGAATTCTGC+TGG 0.490022 5.2:-80822675 None:intergenic
AAGAATTTCATAGCCTATGC+TGG 0.493518 5.2:-80822308 None:intergenic
CAGCATAGAATTCATGTCTC+AGG 0.499450 5.2:+80820969 MS.gene81291:CDS
AGAGATTGACATTCGAGTTG+AGG 0.503993 5.2:+80821014 MS.gene81291:CDS
AAGTTTACAGTATCAAATGA+AGG 0.505100 5.2:-80824312 None:intergenic
ACCTTAATAATCGCCACTGA+AGG 0.506675 5.2:-80822765 None:intergenic
ATCAAAGCAAGAATTTCGCC+GGG 0.507268 5.2:-80821742 None:intergenic
AAGGGTATCACAGGAAGCAT+TGG 0.509325 5.2:+80821718 MS.gene81291:CDS
AGAGGCTCAACTCCGAGATC+AGG 0.509457 5.2:+80823141 MS.gene81291:CDS
GTGAAAGCGAAGGAGGGTGC+AGG 0.509765 5.2:+80824274 MS.gene81291:CDS
AAACATGTTAAAGATTCTGC+TGG 0.514747 5.2:-80822544 None:intergenic
AAGGAATATCAGGAGGAGAA+AGG 0.516071 5.2:+80822278 MS.gene81291:CDS
TCTTGCTTGCTCATGTTGGT+TGG 0.518009 5.2:-80822068 None:intergenic
GTTTCTTCAACTGTAAGTTG+TGG 0.518691 5.2:-80822017 None:intergenic
TACAGGTGGCTACTATGTCC+AGG 0.524500 5.2:+80823797 MS.gene81291:CDS
CTCTCCTGTTTATTATGGGA+AGG 0.524723 5.2:+80822593 MS.gene81291:CDS
GAGCATTCAAAGAGCAGGAA+TGG 0.530777 5.2:+80823743 MS.gene81291:CDS
TAAAGATTCTGCTGGATGGC+TGG 0.531941 5.2:-80822536 None:intergenic
TCAAGGATCTAGGCCTAGAA+AGG 0.537892 5.2:+80822117 MS.gene81291:CDS
ACAATAAGCATGAAAACAGT+AGG 0.539684 5.2:-80823510 None:intergenic
TCATCAAGTAGTAGCAATGA+AGG 0.539700 5.2:-80822337 None:intergenic
CATAGTAGCCACCTGTAAGA+AGG 0.541861 5.2:-80823791 None:intergenic
AGGTATACTTAAGAAAAGAA+AGG 0.543379 5.2:+80823412 MS.gene81291:CDS
ATAGTCCTGCTCTTAAAAGA+AGG 0.544365 5.2:+80821863 MS.gene81291:CDS
TCAATGTCACCTCCATCTGT+TGG 0.548912 5.2:+80820916 MS.gene81291:CDS
ATCACAGGAAGCATTGGCCC+CGG 0.551823 5.2:+80821724 MS.gene81291:CDS
AAAAGGAATGGACAGTGAGT+TGG 0.555020 5.2:+80822981 MS.gene81291:CDS
AAGAGTTGAGAATACTATCA+AGG 0.555684 5.2:+80822100 MS.gene81291:CDS
CCCTCTCCCTGTATATCTCA+AGG 0.560435 5.2:+80821059 MS.gene81291:CDS
ACCTTGAGATATACAGGGAG+AGG 0.561482 5.2:-80821060 None:intergenic
TGTGAGAGAGGATGAGATTG+AGG 0.565020 5.2:+80820885 MS.gene81291:CDS
ATGTTATTCCTTCTTACAGG+TGG 0.566372 5.2:+80823783 MS.gene81291:CDS
CACTCTTCAAGGACTAGCAA+AGG 0.570159 5.2:+80822405 MS.gene81291:CDS
AAAGCTTCCTGCAATCTGCA+TGG 0.573772 5.2:-80820941 None:intergenic
GATACTGTAAACTTGAAAGG+TGG 0.577773 5.2:+80824321 MS.gene81291:CDS
TTGACATCATTGTCTTTACA+GGG 0.580586 5.2:-80821642 None:intergenic
TACCTAGTAGTACCTGATCT+CGG 0.581158 5.2:-80823153 None:intergenic
GTTATGAGCATTCAAAGAGC+AGG 0.582016 5.2:+80823738 MS.gene81291:CDS
CCTTAATAATCGCCACTGAA+GGG 0.583592 5.2:-80822764 None:intergenic
GTGGAATCAAGACCTGAAGT+TGG 0.587104 5.2:-80822361 None:intergenic
TATGAATGTGAAAGCGAAGG+AGG 0.588398 5.2:+80824267 MS.gene81291:CDS
TGTAAAGACAATGATGTCAA+AGG 0.589535 5.2:+80821645 MS.gene81291:CDS
GCAAAACTGAAAATAACGTA+AGG 0.589831 5.2:-80823575 None:intergenic
AAACTTCTTCTGATATCAGA+AGG 0.594489 5.2:+80822570 MS.gene81291:CDS
GAACCGAAAGCAAAGAGCCA+TGG 0.598115 5.2:-80824370 None:intergenic
GAGAAGAAGTTTGTTTGCTG+AGG 0.599548 5.2:-80822383 None:intergenic
AATCGCCACTGAAGGGTCAG+TGG 0.601040 5.2:-80822757 None:intergenic
ATCTGCATGGAACCAACAGA+TGG 0.603528 5.2:-80820928 None:intergenic
TCCTCCTACAACTCTTAACA+AGG 0.606674 5.2:-80821791 None:intergenic
CCTTGAGATATACAGGGAGA+GGG 0.607284 5.2:-80821059 None:intergenic
GATTGGATTTGTAACACAAG+AGG 0.611572 5.2:+80821983 MS.gene81291:CDS
ATGTTAAAGATTCTGCTGGA+TGG 0.613207 5.2:-80822540 None:intergenic
GAAAGGAAGAGAACCAGCAT+AGG 0.618520 5.2:+80822295 MS.gene81291:CDS
TATTTCCGGGACGAACCTCA+AGG 0.628989 5.2:-80822643 None:intergenic
TGGAGGTGACATTGACATGT+TGG 0.632035 5.2:-80820908 None:intergenic
TGCATGGAACCAACAGATGG+AGG 0.632283 5.2:-80820925 None:intergenic
ATAGGTGGAGGATATCTCAA+AGG 0.633463 5.2:+80822259 MS.gene81291:CDS
CTATATGAATGTGAAAGCGA+AGG 0.635438 5.2:+80824264 MS.gene81291:CDS
ATGAATGTGAAAGCGAAGGA+GGG 0.644388 5.2:+80824268 MS.gene81291:CDS
ACATACCAAAGTTCATGCAA+TGG 0.644730 5.2:+80824172 MS.gene81291:CDS
GTTGTCTTTCCACTACCAGA+AGG 0.648172 5.2:-80821769 None:intergenic
AGAATCCACTGACCCTTCAG+TGG 0.654429 5.2:+80822752 MS.gene81291:CDS
TTGAGATATACAGGGAGAGG+GGG 0.657072 5.2:-80821057 None:intergenic
TCTCTGAATACCTATTGTGA+AGG 0.657985 5.2:-80820996 None:intergenic
GATCATGGAAAATGTGAGAG+AGG 0.658226 5.2:+80820873 None:intergenic
AGTTTGGATTCTGATAGCCA+TGG 0.658413 5.2:+80824353 MS.gene81291:CDS
ACCTTGTTAAGAGTTGTAGG+AGG 0.662670 5.2:+80821790 MS.gene81291:CDS
CTTGAGATATACAGGGAGAG+GGG 0.662947 5.2:-80821058 None:intergenic
TCACTACCTTGAGATATACA+GGG 0.676242 5.2:-80821065 None:intergenic
TATCTCAAAGGAATATCAGG+AGG 0.686148 5.2:+80822271 MS.gene81291:CDS
GAAATCTTCAACCAATACAG+AGG 0.691223 5.2:+80823123 MS.gene81291:CDS
CAGCACTCTATGTGACATGG+TGG 0.711905 5.2:+80823473 MS.gene81291:CDS
AAGCAGCACTCTATGTGACA+TGG 0.726541 5.2:+80823470 MS.gene81291:CDS
GGCTGGCTTTAAGAGCACTG+CGG 0.755321 5.2:+80823542 MS.gene81291:CDS
TCAAAGCAAGAATTTCGCCG+GGG 0.774276 5.2:-80821741 None:intergenic
TGGGAAGGCTAGAGACACAG+CGG 0.774897 5.2:+80822608 MS.gene81291:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATAGTCATAATATT+TGG - chr5.2:80824079-80824098 None:intergenic 10.0%
!! GTTAATCGTAATTTATTTAT+AGG + chr5.2:80822791-80822810 MS.gene81291:intron 15.0%
!! TTAAAGTTTAAAGAAAAACA+TGG - chr5.2:80821234-80821253 None:intergenic 15.0%
!!! AAATACAAGACAATTTTAAA+GGG + chr5.2:80821700-80821719 MS.gene81291:CDS 15.0%
!!! ATATTTTGATATATTGAGAT+TGG + chr5.2:80823057-80823076 MS.gene81291:CDS 15.0%
!! AAAACTGAATTATACGAATT+AGG + chr5.2:80824024-80824043 MS.gene81291:intron 20.0%
!! AATAGTCATAATATTTGGTT+TGG - chr5.2:80824074-80824093 None:intergenic 20.0%
!! ATATGTTCTCTTATAAAGAA+TGG - chr5.2:80823020-80823039 None:intergenic 20.0%
!! GTTAAACATATATATCTTTG+TGG + chr5.2:80823855-80823874 MS.gene81291:intron 20.0%
!! TATTAACAACAAAAACAACA+GGG - chr5.2:80823690-80823709 None:intergenic 20.0%
!!! AAATCATTTTGAATGCTAAA+AGG - chr5.2:80821426-80821445 None:intergenic 20.0%
!!! AAGATTACTTGATAATGTAA+AGG + chr5.2:80821813-80821832 MS.gene81291:CDS 20.0%
!!! AGATTACTTGATAATGTAAA+GGG + chr5.2:80821814-80821833 MS.gene81291:CDS 20.0%
!!! ATTTGTTATTTTCTTCTACA+TGG - chr5.2:80821684-80821703 None:intergenic 20.0%
!!! CAAATACAAGACAATTTTAA+AGG + chr5.2:80821699-80821718 MS.gene81291:CDS 20.0%
!!! GTTTTATGTAAAGATAGTTT+TGG - chr5.2:80824009-80824028 None:intergenic 20.0%
!!! TAATGTCATTTAAGTACTTA+CGG - chr5.2:80821367-80821386 None:intergenic 20.0%
!!! TGTTGTTTTTGTTGTTAATA+GGG + chr5.2:80823690-80823709 MS.gene81291:intron 20.0%
! AAGTTTAAAGAAAAACATGG+AGG - chr5.2:80821231-80821250 None:intergenic 25.0%
! AAGTTTACAGTATCAAATGA+AGG - chr5.2:80824315-80824334 None:intergenic 25.0%
! AGGTATACTTAAGAAAAGAA+AGG + chr5.2:80823412-80823431 MS.gene81291:CDS 25.0%
! ATCAAAACAAATATAAGTGC+AGG - chr5.2:80821392-80821411 None:intergenic 25.0%
! CAGATGAATCTTTAACATTT+CGG - chr5.2:80823951-80823970 None:intergenic 25.0%
! CTATGTATTTCCATTTGAAA+AGG + chr5.2:80823392-80823411 MS.gene81291:CDS 25.0%
! CTATTAACAACAAAAACAAC+AGG - chr5.2:80823691-80823710 None:intergenic 25.0%
! GTTAAGAATATATCTGAATC+TGG - chr5.2:80821314-80821333 None:intergenic 25.0%
! TAGCATTCAAAATGATTTGA+TGG + chr5.2:80821428-80821447 MS.gene81291:intron 25.0%
! TCATCTTTCAAAATATCTTG+TGG - chr5.2:80822732-80822751 None:intergenic 25.0%
! TCTTATAAAGAATGGTGAAT+TGG - chr5.2:80823012-80823031 None:intergenic 25.0%
! TTTGATACTGTAAACTTGAA+AGG + chr5.2:80824318-80824337 MS.gene81291:CDS 25.0%
!! ACTCAAGTATAAAGACATTT+TGG + chr5.2:80822886-80822905 MS.gene81291:CDS 25.0%
!! CTTAAGTATACCTTTTCAAA+TGG - chr5.2:80823405-80823424 None:intergenic 25.0%
!! TGATTCTCTTCTTTTTCTTT+CGG - chr5.2:80822914-80822933 None:intergenic 25.0%
!! TGTTCTACATTTGCATATTT+TGG + chr5.2:80823343-80823362 MS.gene81291:CDS 25.0%
!!! ATGTAAAGATAGTTTTGGTT+TGG - chr5.2:80824004-80824023 None:intergenic 25.0%
!!! CTGTTGTTTTTGTTGTTAAT+AGG + chr5.2:80823689-80823708 MS.gene81291:intron 25.0%
!!! GTTGTTTTTGTTGTTAATAG+GGG + chr5.2:80823691-80823710 MS.gene81291:intron 25.0%
!!! GTTTTTAAGTATCGTCTTTT+TGG - chr5.2:80824129-80824148 None:intergenic 25.0%
!!! TTGTTTTTGTTGTTAATAGG+GGG + chr5.2:80823692-80823711 MS.gene81291:intron 25.0%
AAACATGTTAAAGATTCTGC+TGG - chr5.2:80822547-80822566 None:intergenic 30.0%
AAACTTCTTCTGATATCAGA+AGG + chr5.2:80822570-80822589 MS.gene81291:CDS 30.0%
AACATATAGAGCAAGATTCA+AGG + chr5.2:80823033-80823052 MS.gene81291:CDS 30.0%
AAGACTCAGAACATGTTAAA+GGG + chr5.2:80823630-80823649 MS.gene81291:intron 30.0%
AAGAGTTGAGAATACTATCA+AGG + chr5.2:80822100-80822119 MS.gene81291:CDS 30.0%
ACAATAAGCATGAAAACAGT+AGG - chr5.2:80823513-80823532 None:intergenic 30.0%
ATACTTAACCGTTACAAGTT+TGG + chr5.2:80823915-80823934 MS.gene81291:intron 30.0%
ATTCAGTTTCCAATATCAAG+TGG - chr5.2:80821458-80821477 None:intergenic 30.0%
CATTAGGAACAAAACAATGT+CGG - chr5.2:80821506-80821525 None:intergenic 30.0%
CGAAATGTTAAAGATTCATC+TGG + chr5.2:80823949-80823968 MS.gene81291:intron 30.0%
CTTATGTTATTCCTTCTTAC+AGG + chr5.2:80823780-80823799 MS.gene81291:CDS 30.0%
GAAAAAGAAGAGAATCATAG+AGG + chr5.2:80822917-80822936 MS.gene81291:CDS 30.0%
GCAAAACTGAAAATAACGTA+AGG - chr5.2:80823578-80823597 None:intergenic 30.0%
GTTACAAATCCAATCCTATA+AGG - chr5.2:80821978-80821997 None:intergenic 30.0%
TACATGTCATTCATGTACTA+TGG + chr5.2:80824201-80824220 MS.gene81291:CDS 30.0%
TCTCATTTATGCTACCTTAT+AGG + chr5.2:80821961-80821980 MS.gene81291:intron 30.0%
TGTAAAGACAATGATGTCAA+AGG + chr5.2:80821645-80821664 MS.gene81291:CDS 30.0%
TGTAACGGTTAAGTATAGTT+CGG - chr5.2:80823911-80823930 None:intergenic 30.0%
TTGACATCATTGTCTTTACA+GGG - chr5.2:80821645-80821664 None:intergenic 30.0%
TTGGAATTGCACTTCTATTA+GGG + chr5.2:80823089-80823108 MS.gene81291:CDS 30.0%
TTTATGCTACCTTATAGGAT+TGG + chr5.2:80821966-80821985 MS.gene81291:intron 30.0%
TTTCTTCAACTGTAAGTTGT+GGG - chr5.2:80822019-80822038 None:intergenic 30.0%
TTTGACATCATTGTCTTTAC+AGG - chr5.2:80821646-80821665 None:intergenic 30.0%
! AATACTTTTGAATTGCCCTT+AGG + chr5.2:80822485-80822504 MS.gene81291:intron 30.0%
! AGTAACCATTGACTAATTTC+TGG + chr5.2:80823305-80823324 MS.gene81291:intron 30.0%
! ATAGCTAGTTGAAGATGTTT+TGG - chr5.2:80822953-80822972 None:intergenic 30.0%
! CAGTTTTACCAAACTTGTAA+CGG - chr5.2:80823926-80823945 None:intergenic 30.0%
! CTTCTAAAAGTGCAATATTC+AGG + chr5.2:80824234-80824253 MS.gene81291:CDS 30.0%
! TGGACATCTTCATGTATTTT+TGG + chr5.2:80823363-80823382 MS.gene81291:CDS 30.0%
!! GATCTGAACATTTTAAGTCA+TGG + chr5.2:80823188-80823207 MS.gene81291:intron 30.0%
!! TGAACATTTTAAGTCATGGA+GGG + chr5.2:80823192-80823211 MS.gene81291:intron 30.0%
!! TTTAACCTTCTTTTAAGAGC+AGG - chr5.2:80821871-80821890 None:intergenic 30.0%
!!! AAAGATAGTTTTGGTTTGGT+AGG - chr5.2:80824000-80824019 None:intergenic 30.0%
!!! ACAATTTTAAAGGGTATCAC+AGG + chr5.2:80821709-80821728 MS.gene81291:CDS 30.0%
!!! GGTTTGAGTCATCTTATTTT+TGG - chr5.2:80821197-80821216 None:intergenic 30.0%
AAACTTCTTCTCACTCTTCA+AGG + chr5.2:80822394-80822413 MS.gene81291:CDS 35.0%
AAGAATTCTGCTGGATTCAT+TGG - chr5.2:80822669-80822688 None:intergenic 35.0%
AAGAATTTCATAGCCTATGC+TGG - chr5.2:80822311-80822330 None:intergenic 35.0%
AAGGCTCTCCTGTTTATTAT+GGG + chr5.2:80822589-80822608 MS.gene81291:CDS 35.0%
ACAACCTTGTTAAGAGTTGT+AGG + chr5.2:80821787-80821806 MS.gene81291:CDS 35.0%
ACATACCAAAGTTCATGCAA+TGG + chr5.2:80824172-80824191 MS.gene81291:CDS 35.0%
ACATCTTCAACTAGCTATTC+AGG + chr5.2:80822955-80822974 MS.gene81291:CDS 35.0%
ACTAGCTATTCAGGTCAAAA+AGG + chr5.2:80822964-80822983 MS.gene81291:CDS 35.0%
AGGCATTACTATCACATACA+TGG + chr5.2:80822811-80822830 MS.gene81291:intron 35.0%
ATAGTCCTGCTCTTAAAAGA+AGG + chr5.2:80821863-80821882 MS.gene81291:CDS 35.0%
ATGACTCAAACCCTTACTTT+AGG + chr5.2:80821205-80821224 MS.gene81291:intron 35.0%
ATGTTAAAGATTCTGCTGGA+TGG - chr5.2:80822543-80822562 None:intergenic 35.0%
ATGTTATTCCTTCTTACAGG+TGG + chr5.2:80823783-80823802 MS.gene81291:CDS 35.0%
ATTATAGTTCTTCCAGCCTA+AGG - chr5.2:80822504-80822523 None:intergenic 35.0%
CAAGACTCAGAACATGTTAA+AGG + chr5.2:80823629-80823648 MS.gene81291:intron 35.0%
CATGCTTATTGTGTACTTCA+TGG + chr5.2:80823521-80823540 MS.gene81291:CDS 35.0%
CATTCATGTACTATGGATTC+AGG + chr5.2:80824208-80824227 MS.gene81291:CDS 35.0%
CGCTTTCACATTCATATAGT+TGG - chr5.2:80824263-80824282 None:intergenic 35.0%
CTATATGAATGTGAAAGCGA+AGG + chr5.2:80824264-80824283 MS.gene81291:CDS 35.0%
CTATTCAGGTCAAAAAGGAA+TGG + chr5.2:80822969-80822988 MS.gene81291:CDS 35.0%
CTGCAAGACAAATCAATTCA+AGG - chr5.2:80824151-80824170 None:intergenic 35.0%
CTTGGAATTGCACTTCTATT+AGG + chr5.2:80823088-80823107 MS.gene81291:CDS 35.0%
GAAATCTTCAACCAATACAG+AGG + chr5.2:80823123-80823142 MS.gene81291:CDS 35.0%
GAGAATACTATCAAGGATCT+AGG + chr5.2:80822107-80822126 MS.gene81291:CDS 35.0%
GATACTGTAAACTTGAAAGG+TGG + chr5.2:80824321-80824340 MS.gene81291:CDS 35.0%
GATTGGATTTGTAACACAAG+AGG + chr5.2:80821983-80822002 MS.gene81291:CDS 35.0%
GCAATTATCAGCACATCATT+AGG - chr5.2:80821522-80821541 None:intergenic 35.0%
GGATATCTCAAAGGAATATC+AGG + chr5.2:80822268-80822287 MS.gene81291:CDS 35.0%
GTTTCTTCAACTGTAAGTTG+TGG - chr5.2:80822020-80822039 None:intergenic 35.0%
TATCTCAAAGGAATATCAGG+AGG + chr5.2:80822271-80822290 MS.gene81291:CDS 35.0%
TCACTACCTTGAGATATACA+GGG - chr5.2:80821068-80821087 None:intergenic 35.0%
TCATCAAGTAGTAGCAATGA+AGG - chr5.2:80822340-80822359 None:intergenic 35.0%
TCTCTGAATACCTATTGTGA+AGG - chr5.2:80820999-80821018 None:intergenic 35.0%
TGATCTTCTCTGCATTCTTA+AGG + chr5.2:80822042-80822061 MS.gene81291:CDS 35.0%
TTATAGTTCTTCCAGCCTAA+GGG - chr5.2:80822503-80822522 None:intergenic 35.0%
TTCAACCATTGCATGAACTT+TGG - chr5.2:80824180-80824199 None:intergenic 35.0%
TTCACTACCTTGAGATATAC+AGG - chr5.2:80821069-80821088 None:intergenic 35.0%
TTCTCTTAGCTCGAGAATTA+AGG + chr5.2:80821133-80821152 MS.gene81291:intron 35.0%
! CATTGTCTTTACAGGGTTTT+TGG - chr5.2:80821638-80821657 None:intergenic 35.0%
! TAAAGATTCATCTGGAACCT+AGG + chr5.2:80823957-80823976 MS.gene81291:intron 35.0%
! TTTTTCTTGCTTGCTCATGT+TGG - chr5.2:80822075-80822094 None:intergenic 35.0%
!! AACATTTTAAGTCATGGAGG+GGG + chr5.2:80823194-80823213 MS.gene81291:intron 35.0%
!! CTGAACATTTTAAGTCATGG+AGG + chr5.2:80823191-80823210 MS.gene81291:intron 35.0%
!! CTTTTAAGAGCAGGACTATA+TGG - chr5.2:80821862-80821881 None:intergenic 35.0%
!! GAACATTTTAAGTCATGGAG+GGG + chr5.2:80823193-80823212 MS.gene81291:intron 35.0%
AAAAGGAATGGACAGTGAGT+TGG + chr5.2:80822981-80823000 MS.gene81291:CDS 40.0%
AAACATGGAGGCCTAAAGTA+AGG - chr5.2:80821219-80821238 None:intergenic 40.0%
AACATGGAGGCCTAAAGTAA+GGG - chr5.2:80821218-80821237 None:intergenic 40.0%
AAGGAATATCAGGAGGAGAA+AGG + chr5.2:80822278-80822297 MS.gene81291:CDS 40.0%
AAGGTGGCTTAAGTGAAGTT+TGG + chr5.2:80824337-80824356 MS.gene81291:CDS 40.0%
AAGTCAAGCAAGAATTCTGC+TGG - chr5.2:80822678-80822697 None:intergenic 40.0%
ACCTTAATAATCGCCACTGA+AGG - chr5.2:80822768-80822787 None:intergenic 40.0%
ACCTTGTTAAGAGTTGTAGG+AGG + chr5.2:80821790-80821809 MS.gene81291:CDS 40.0%
AGATGTCGCCACACAAAAAT+AGG + chr5.2:80822241-80822260 MS.gene81291:intron 40.0%
AGCAGAATTCTTGCTTGACT+TGG + chr5.2:80822677-80822696 MS.gene81291:CDS 40.0%
AGGTACTACTAGGTAGTTTC+AGG + chr5.2:80823161-80823180 MS.gene81291:intron 40.0%
AGTTTGGATTCTGATAGCCA+TGG + chr5.2:80824353-80824372 MS.gene81291:CDS 40.0%
ATAGGTGGAGGATATCTCAA+AGG + chr5.2:80822259-80822278 MS.gene81291:CDS 40.0%
ATCAAAGCAAGAATTTCGCC+GGG - chr5.2:80821745-80821764 None:intergenic 40.0%
ATGAATGTGAAAGCGAAGGA+GGG + chr5.2:80824268-80824287 MS.gene81291:CDS 40.0%
CACTTCTATTAGGGCTACTT+TGG + chr5.2:80823098-80823117 MS.gene81291:CDS 40.0%
CAGCATAGAATTCATGTCTC+AGG + chr5.2:80820969-80820988 MS.gene81291:CDS 40.0%
CAGTGGCGATTATTAAGGTA+GGG + chr5.2:80822769-80822788 MS.gene81291:intron 40.0%
CATCAAAGCAAGAATTTCGC+CGG - chr5.2:80821746-80821765 None:intergenic 40.0%
CCTTAATAATCGCCACTGAA+GGG - chr5.2:80822767-80822786 None:intergenic 40.0%
CTCTCCTGTTTATTATGGGA+AGG + chr5.2:80822593-80822612 MS.gene81291:CDS 40.0%
CTGCACCAGAAATTAGTCAA+TGG - chr5.2:80823313-80823332 None:intergenic 40.0%
CTGGATTCATTGGTATTTCC+GGG - chr5.2:80822659-80822678 None:intergenic 40.0%
CTTATTGTGTACTTCATGGC+TGG + chr5.2:80823525-80823544 MS.gene81291:CDS 40.0%
GAAGGCTCTCCTGTTTATTA+TGG + chr5.2:80822588-80822607 MS.gene81291:CDS 40.0%
GATGGATGACCACTTGATAT+TGG + chr5.2:80821446-80821465 MS.gene81291:intron 40.0%
GCTGGATTCATTGGTATTTC+CGG - chr5.2:80822660-80822679 None:intergenic 40.0%
GGCGAAATTCTTGCTTTGAT+GGG + chr5.2:80821745-80821764 MS.gene81291:CDS 40.0%
GGTACTACTAGGTAGTTTCA+GGG + chr5.2:80823162-80823181 MS.gene81291:intron 40.0%
GTTATGAGCATTCAAAGAGC+AGG + chr5.2:80823738-80823757 MS.gene81291:CDS 40.0%
TACCTAGTAGTACCTGATCT+CGG - chr5.2:80823156-80823175 None:intergenic 40.0%
TATGAATGTGAAAGCGAAGG+AGG + chr5.2:80824267-80824286 MS.gene81291:CDS 40.0%
TCAGTGGCGATTATTAAGGT+AGG + chr5.2:80822768-80822787 MS.gene81291:intron 40.0%
TCCTCCTACAACTCTTAACA+AGG - chr5.2:80821794-80821813 None:intergenic 40.0%
! AAGAAGTTTGTTTGCTGAGG+TGG - chr5.2:80822383-80822402 None:intergenic 40.0%
! CTAGCCTTCCCATAATAAAC+AGG - chr5.2:80822600-80822619 None:intergenic 40.0%
! GAGAAGAAGTTTGTTTGCTG+AGG - chr5.2:80822386-80822405 None:intergenic 40.0%
! TTCTATTAGGGCTACTTTGG+TGG + chr5.2:80823101-80823120 MS.gene81291:CDS 40.0%
! TTGAGATTGGTTCAAGCACT+TGG + chr5.2:80823070-80823089 MS.gene81291:CDS 40.0%
! TTTTTGTGTGGCGACATCTA+TGG - chr5.2:80822240-80822259 None:intergenic 40.0%
!! AGAGATTGACATTCGAGTTG+AGG + chr5.2:80821014-80821033 MS.gene81291:CDS 40.0%
!! CATTGACTAATTTCTGGTGC+AGG + chr5.2:80823311-80823330 MS.gene81291:intron 40.0%
!!! ATCCTCCACCTATTTTTGTG+TGG - chr5.2:80822252-80822271 None:intergenic 40.0%
!!! TTTTGTTGTTAATAGGGGGC+AGG + chr5.2:80823696-80823715 MS.gene81291:intron 40.0%
AAAGCTTCCTGCAATCTGCA+TGG - chr5.2:80820944-80820963 None:intergenic 45.0%
AAGCAGCACTCTATGTGACA+TGG + chr5.2:80823470-80823489 MS.gene81291:CDS 45.0%
ACCTTGAGATATACAGGGAG+AGG - chr5.2:80821063-80821082 None:intergenic 45.0%
ATCTGCATGGAACCAACAGA+TGG - chr5.2:80820931-80820950 None:intergenic 45.0%
ATGCAGATTGCAGGAAGCTT+TGG + chr5.2:80820943-80820962 MS.gene81291:CDS 45.0%
CAATAGAGTCGAGTGTCTTC+AGG + chr5.2:80821165-80821184 MS.gene81291:intron 45.0%
CATAGTAGCCACCTGTAAGA+AGG - chr5.2:80823794-80823813 None:intergenic 45.0%
CCCTTCAGTGGCGATTATTA+AGG + chr5.2:80822764-80822783 MS.gene81291:CDS 45.0%
CCTTGAGATATACAGGGAGA+GGG - chr5.2:80821062-80821081 None:intergenic 45.0%
CGGCGAAATTCTTGCTTTGA+TGG + chr5.2:80821744-80821763 MS.gene81291:CDS 45.0%
CTACTAGGTAGTTTCAGGGA+CGG + chr5.2:80823166-80823185 MS.gene81291:intron 45.0%
CTACTTGATGAGCCAACTTC+AGG + chr5.2:80822349-80822368 MS.gene81291:CDS 45.0%
CTCAGGCATACCTTCACAAT+AGG + chr5.2:80820986-80821005 MS.gene81291:CDS 45.0%
CTTGAGATATACAGGGAGAG+GGG - chr5.2:80821061-80821080 None:intergenic 45.0%
GAAAGGAAGAGAACCAGCAT+AGG + chr5.2:80822295-80822314 MS.gene81291:CDS 45.0%
GAGCATTCAAAGAGCAGGAA+TGG + chr5.2:80823743-80823762 MS.gene81291:CDS 45.0%
GCTACTTCTTTGTGCATACC+TGG - chr5.2:80823818-80823837 None:intergenic 45.0%
GTGGAATCAAGACCTGAAGT+TGG - chr5.2:80822364-80822383 None:intergenic 45.0%
GTTGTCTTTCCACTACCAGA+AGG - chr5.2:80821772-80821791 None:intergenic 45.0%
GTTTGGTAGGACAACTGAAC+TGG - chr5.2:80823987-80824006 None:intergenic 45.0%
TAAAGATTCTGCTGGATGGC+TGG - chr5.2:80822539-80822558 None:intergenic 45.0%
TAGCCATGGCTCTTTGCTTT+CGG + chr5.2:80824367-80824386 MS.gene81291:CDS 45.0%
TCAAAGCAAGAATTTCGCCG+GGG - chr5.2:80821744-80821763 None:intergenic 45.0%
TCAAGGATCTAGGCCTAGAA+AGG + chr5.2:80822117-80822136 MS.gene81291:CDS 45.0%
TCAATGTCACCTCCATCTGT+TGG + chr5.2:80820916-80820935 MS.gene81291:CDS 45.0%
TCTTGCTTGCTCATGTTGGT+TGG - chr5.2:80822071-80822090 None:intergenic 45.0%
TGCTAGACACACACCTTTCT+AGG - chr5.2:80822133-80822152 None:intergenic 45.0%
TGGAGGTGACATTGACATGT+TGG - chr5.2:80820911-80820930 None:intergenic 45.0%
TGTCGCCACACAAAAATAGG+TGG + chr5.2:80822244-80822263 MS.gene81291:CDS 45.0%
TGTGAGAGAGGATGAGATTG+AGG + chr5.2:80820885-80820904 MS.gene81291:CDS 45.0%
TTCATCGCTCGGTTTAGGAA+GGG + chr5.2:80823882-80823901 MS.gene81291:intron 45.0%
TTGAGATATACAGGGAGAGG+GGG - chr5.2:80821060-80821079 None:intergenic 45.0%
! AGAAAGGTGTGTGTCTAGCA+TGG + chr5.2:80822133-80822152 MS.gene81291:intron 45.0%
! CACTCTTCAAGGACTAGCAA+AGG + chr5.2:80822405-80822424 MS.gene81291:CDS 45.0%
! CTTTTGAATTGCCCTTAGGC+TGG + chr5.2:80822489-80822508 MS.gene81291:intron 45.0%
! TTTGTGGACTGTTCATCGCT+CGG + chr5.2:80823871-80823890 MS.gene81291:intron 45.0%
!! AAGGGTATCACAGGAAGCAT+TGG + chr5.2:80821718-80821737 MS.gene81291:CDS 45.0%
!! CAGGGTTTTTGGAAGCTGTT+TGG - chr5.2:80821627-80821646 None:intergenic 45.0%
!! CGGAGTACTTTTCATCCTTG+AGG + chr5.2:80822628-80822647 MS.gene81291:CDS 45.0%
!! GACTAATTTCTGGTGCAGGT+TGG + chr5.2:80823315-80823334 MS.gene81291:intron 45.0%
!! TTCTTGCTTGACTTGGCAAC+TGG + chr5.2:80822684-80822703 MS.gene81291:CDS 45.0%
ACAACTGAACTGGTGCACCT+AGG - chr5.2:80823977-80823996 None:intergenic 50.0%
AGAATCCACTGACCCTTCAG+TGG + chr5.2:80822752-80822771 MS.gene81291:CDS 50.0%
AGGGGGATCTTGGTTGAAAC+TGG - chr5.2:80821043-80821062 None:intergenic 50.0%
CAGCACTCTATGTGACATGG+TGG + chr5.2:80823473-80823492 MS.gene81291:CDS 50.0%
CCCTCTCCCTGTATATCTCA+AGG + chr5.2:80821059-80821078 MS.gene81291:CDS 50.0%
CGCCACACAAAAATAGGTGG+AGG + chr5.2:80822247-80822266 MS.gene81291:CDS 50.0%
CTCCGAGATCAGGTACTACT+AGG + chr5.2:80823151-80823170 MS.gene81291:intron 50.0%
GAACCGAAAGCAAAGAGCCA+TGG - chr5.2:80824373-80824392 None:intergenic 50.0%
GACTGTTCATCGCTCGGTTT+AGG + chr5.2:80823877-80823896 MS.gene81291:intron 50.0%
GAGTCGAGTGTCTTCAGGAT+TGG + chr5.2:80821170-80821189 MS.gene81291:intron 50.0%
GGCTCTTTGCTTTCGGTTCT+TGG + chr5.2:80824374-80824393 MS.gene81291:CDS 50.0%
GTTCATCGCTCGGTTTAGGA+AGG + chr5.2:80823881-80823900 MS.gene81291:intron 50.0%
TACAGGTGGCTACTATGTCC+AGG + chr5.2:80823797-80823816 MS.gene81291:CDS 50.0%
TAGGGGGCAGGAGAACTATT+TGG + chr5.2:80823708-80823727 MS.gene81291:intron 50.0%
TATTTCCGGGACGAACCTCA+AGG - chr5.2:80822646-80822665 None:intergenic 50.0%
TCGGAGTTGAGCCTCTGTAT+TGG - chr5.2:80823137-80823156 None:intergenic 50.0%
TGCATGGAACCAACAGATGG+AGG - chr5.2:80820928-80820947 None:intergenic 50.0%
TTCATCCTTGAGGTTCGTCC+CGG + chr5.2:80822638-80822657 MS.gene81291:CDS 50.0%
! CTTGCTTTGATGGGTCCTTC+TGG + chr5.2:80821754-80821773 MS.gene81291:CDS 50.0%
! GTTGGTTCCATGCAGATTGC+AGG + chr5.2:80820934-80820953 MS.gene81291:CDS 50.0%
! TTGATGGGTCCTTCTGGTAG+TGG + chr5.2:80821760-80821779 MS.gene81291:CDS 50.0%
AATCGCCACTGAAGGGTCAG+TGG - chr5.2:80822760-80822779 None:intergenic 55.0%
AGAGGCTCAACTCCGAGATC+AGG + chr5.2:80823141-80823160 MS.gene81291:CDS 55.0%
ATACAGGGAGAGGGGGATCT+TGG - chr5.2:80821053-80821072 None:intergenic 55.0%
TGGGAAGGCTAGAGACACAG+CGG + chr5.2:80822608-80822627 MS.gene81291:CDS 55.0%
!! ATCACAGGAAGCATTGGCCC+CGG + chr5.2:80821724-80821743 MS.gene81291:CDS 55.0%
!! GGCTGGCTTTAAGAGCACTG+CGG + chr5.2:80823542-80823561 MS.gene81291:CDS 55.0%
! GTGAAAGCGAAGGAGGGTGC+AGG + chr5.2:80824274-80824293 MS.gene81291:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 80820877 80824431 80820877 ID=MS.gene81291
chr5.2 mRNA 80820877 80824431 80820877 ID=MS.gene81291.t1;Parent=MS.gene81291
chr5.2 exon 80820877 80821080 80820877 ID=MS.gene81291.t1.exon1;Parent=MS.gene81291.t1
chr5.2 CDS 80820877 80821080 80820877 ID=cds.MS.gene81291.t1;Parent=MS.gene81291.t1
chr5.2 exon 80821592 80821884 80821592 ID=MS.gene81291.t1.exon2;Parent=MS.gene81291.t1
chr5.2 CDS 80821592 80821884 80821592 ID=cds.MS.gene81291.t1;Parent=MS.gene81291.t1
chr5.2 exon 80821983 80822138 80821983 ID=MS.gene81291.t1.exon3;Parent=MS.gene81291.t1
chr5.2 CDS 80821983 80822138 80821983 ID=cds.MS.gene81291.t1;Parent=MS.gene81291.t1
chr5.2 exon 80822243 80822426 80822243 ID=MS.gene81291.t1.exon4;Parent=MS.gene81291.t1
chr5.2 CDS 80822243 80822426 80822243 ID=cds.MS.gene81291.t1;Parent=MS.gene81291.t1
chr5.2 exon 80822507 80822785 80822507 ID=MS.gene81291.t1.exon5;Parent=MS.gene81291.t1
chr5.2 CDS 80822507 80822785 80822507 ID=cds.MS.gene81291.t1;Parent=MS.gene81291.t1
chr5.2 exon 80822878 80823162 80822878 ID=MS.gene81291.t1.exon6;Parent=MS.gene81291.t1
chr5.2 CDS 80822878 80823162 80822878 ID=cds.MS.gene81291.t1;Parent=MS.gene81291.t1
chr5.2 exon 80823333 80823617 80823333 ID=MS.gene81291.t1.exon7;Parent=MS.gene81291.t1
chr5.2 CDS 80823333 80823617 80823333 ID=cds.MS.gene81291.t1;Parent=MS.gene81291.t1
chr5.2 exon 80823711 80823818 80823711 ID=MS.gene81291.t1.exon8;Parent=MS.gene81291.t1
chr5.2 CDS 80823711 80823818 80823711 ID=cds.MS.gene81291.t1;Parent=MS.gene81291.t1
chr5.2 exon 80824171 80824431 80824171 ID=MS.gene81291.t1.exon9;Parent=MS.gene81291.t1
chr5.2 CDS 80824171 80824431 80824171 ID=cds.MS.gene81291.t1;Parent=MS.gene81291.t1
Gene Sequence

>MS.gene81291

ATGGAAAATGTGAGAGAGGATGAGATTGAGGCCAACATGTCAATGTCACCTCCATCTGTTGGTTCCATGCAGATTGCAGGAAGCTTTGGTCACAGCATAGAATTCATGTCTCAGGCATACCTTCACAATAGGTATTCAGAGATTGACATTCGAGTTGAGGAATCCAGTTTCAACCAAGATCCCCCTCTCCCTGTATATCTCAAGGTAGTGAACAATTAGAGCAAAATATTAATTTTATCAGAAATCAAAGTTCTTTTTCTCTTAGCTCGAGAATTAAGGTTCTTCGTGCAATAGAGTCGAGTGTCTTCAGGATTGGTCCAAAAATAAGATGACTCAAACCCTTACTTTAGGCCTCCATGTTTTTCTTTAAACTTTAAATATATATGTTAAATTAGATAAATCTGAGAATTTGTGAATTTGAGAAAAAGTATTAACCAGATTCAGATATATTCTTAACATGATTTTATTTTCTACTTTATTCTCGAATCCGTAAGTACTTAAATGACATTATACCTGCACTTATATTTGTTTTGATTTTTCAAAACTCCTTTTAGCATTCAAAATGATTTGATGGATGACCACTTGATATTGGAAACTGAATTCAAGAGTCAATGAGAATATTATCACCGACATTGTTTTGTTCCTAATGATGTGCTGATAATTGCTTCACTTGATCACATTCTCAATAATAGACAATTTCTCATTTAATGTGCAGTTTGAAGATGTAGAGTTCAAAGTGAGAAATAGCCAAACAGCTTCCAAAAACCCTGTAAAGACAATGATGTCAAAGGTAGCAACACAACACCATGTAGAAGAAAATAACAAATACAAGACAATTTTAAAGGGTATCACAGGAAGCATTGGCCCCGGCGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGAAAGACAACCTTGTTAAGAGTTGTAGGAGGAAGATTACTTGATAATGTAAAGGGAAAGATATCTTACAATGATGTTCCATATAGTCCTGCTCTTAAAAGAAGGTTAAACATCTTGTTAGAACATCAGCATCTATGACTCAATGTGTGAATATGTGCTAACAATGTACTTTAATGTCTCTCTCATTTATGCTACCTTATAGGATTGGATTTGTAACACAAGAGGATGTTCTTTTCCCACAACTTACAGTTGAAGAAACATTGATCTTCTCTGCATTCTTAAGGCTACCAACCAACATGAGCAAGCAAGAAAAATATGCAAGAGTTGAGAATACTATCAAGGATCTAGGCCTAGAAAGGTGTGTGTCTAGCATGGATCAAAATTTGACGTAAAATATGATTATTGAATACTCAAATAAAGAAATTAAACTGTTTTGCTAAATAATCTTTTGTACAACCATAGATGTCGCCACACAAAAATAGGTGGAGGATATCTCAAAGGAATATCAGGAGGAGAAAGGAAGAGAACCAGCATAGGCTATGAAATTCTTGTTGAGCCTTCATTGCTACTACTTGATGAGCCAACTTCAGGTCTTGATTCCACCTCAGCAAACAAACTTCTTCTCACTCTTCAAGGACTAGCAAAGGTATCAGAAACTAAATTTAACTCTCATTTTGATAACATGTTTTGAACATATGCTGAAAAATACTTTTGAATTGCCCTTAGGCTGGAAGAACTATAATCACAACAATTCACCAGCCATCCAGCAGAATCTTTAACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTCTCCTGTTTATTATGGGAAGGCTAGAGACACAGCGGAGTACTTTTCATCCTTGAGGTTCGTCCCGGAAATACCAATGAATCCAGCAGAATTCTTGCTTGACTTGGCAACTGGACAAGTGAATGATATAAGTATTCCACAAGATATTTTGAAAGATGAAGAATCCACTGACCCTTCAGTGGCGATTATTAAGGTAGGGTTAATCGTAATTTATTTATAGGCATTACTATCACATACATGGTCTATTTCATTCTCAACTTAATAATTGTTTATTTATCATGTTAGTATCTACAACTCAAGTATAAAGACATTTTGGAGCCGAAAGAAAAAGAAGAGAATCATAGAGGAGCAAACACACCAAAACATCTTCAACTAGCTATTCAGGTCAAAAAGGAATGGACAGTGAGTTGGTTAGACCAATTCACCATTCTTTATAAGAGAACATATAGAGCAAGATTCAAGGAATATTTTGATATATTGAGATTGGTTCAAGCACTTGGAATTGCACTTCTATTAGGGCTACTTTGGTGGAAATCTTCAACCAATACAGAGGCTCAACTCCGAGATCAGGTACTACTAGGTAGTTTCAGGGACGGATCTGAACATTTTAAGTCATGGAGGGGGCAATTTACATATAAATTTATAGCATATATATCATTTTTTAAAAACATAAATATGCATCATAATTGTTCTAAACAATTTTGAAATTTTCAGTAACCATTGACTAATTTCTGGTGCAGGTTGGTTTAATGTTCTACATTTGCATATTTTGGACATCTTCATGTATTTTTGGAGCAGTCTATGTATTTCCATTTGAAAAGGTATACTTAAGAAAAGAAAGGAAAGCAGATATGTATAGACTTAGTGTGTACTATGCAAGCAGCACTCTATGTGACATGGTGGCACATGTTTTGTATCCTACTGTTTTCATGCTTATTGTGTACTTCATGGCTGGCTTTAAGAGCACTGCGGCTTGCTTCTTCCTTACGTTATTTTCAGTTTTGCTAATTGCTATCACAAGTCAAGTAAGTTGTGTCAAGACTCAGAACATGTTAAAGGGTAATAATTTGTTTAAAAGTAGCTCTAATGAATATCCCTGTTGTTTTTGTTGTTAATAGGGGGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGAATGGTTGCTTCTTTGATACTTATGTTATTCCTTCTTACAGGTGGCTACTATGTCCAGGTATGCACAAAGAAGTAGCAAGTAGAAGCAATGCTAGTTAAACATATATATCTTTGTGGACTGTTCATCGCTCGGTTTAGGAAGGGAAACCGAACTATACTTAACCGTTACAAGTTTGGTAAAACTGAACCGAAATGTTAAAGATTCATCTGGAACCTAGGTGCACCAGTTCAGTTGTCCTACCAAACCAAAACTATCTTTACATAAAACTGAATTATACGAATTAGGATTGTTATAAAAACAAAAACTTAACCAAACCAAATATTATGACTATTAAAAAAATCAAAAATTGCACTGTTAAACTAAACCAAAAAGACGATACTTAAAAACCTTGAATTGATTTGTCTTGCAGCACATACCAAAGTTCATGCAATGGTTGAAGTACATGTCATTCATGTACTATGGATTCAGGCTTCTTCTAAAAGTGCAATATTCAGGAGACCAACTATATGAATGTGAAAGCGAAGGAGGGTGCAGGAGACTTCAAAGTTCACCTTCATTTGATACTGTAAACTTGAAAGGTGGCTTAAGTGAAGTTTGGATTCTGATAGCCATGGCTCTTTGCTTTCGGTTCTTGGCTTACTTTTGTCTACGCAGAAAGATTGATGTATGA
Protein sequence

>MS.gene81291.t1

MENVREDEIEANMSMSPPSVGSMQIAGSFGHSIEFMSQAYLHNRYSEIDIRVEESSFNQDPPLPVYLKFEDVEFKVRNSQTASKNPVKTMMSKVATQHHVEENNKYKTILKGITGSIGPGEILALMGPSGSGKTTLLRVVGGRLLDNVKGKISYNDVPYSPALKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPTNMSKQEKYARVENTIKDLGLERCRHTKIGGGYLKGISGGERKRTSIGYEILVEPSLLLLDEPTSGLDSTSANKLLLTLQGLAKAGRTIITTIHQPSSRIFNMFDKLLLISEGSPVYYGKARDTAEYFSSLRFVPEIPMNPAEFLLDLATGQVNDISIPQDILKDEESTDPSVAIIKYLQLKYKDILEPKEKEENHRGANTPKHLQLAIQVKKEWTVSWLDQFTILYKRTYRARFKEYFDILRLVQALGIALLLGLLWWKSSTNTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLRKERKADMYRLSVYYASSTLCDMVAHVLYPTVFMLIVYFMAGFKSTAACFFLTLFSVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMQWLKYMSFMYYGFRLLLKVQYSGDQLYECESEGGCRRLQSSPSFDTVNLKGGLSEVWILIAMALCFRFLAYFCLRRKIDV