Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81654.t1 | XP_013454279.1 | 86.5 | 563 | 57 | 1 | 1 | 544 | 275 | 837 | 1.90E-211 | 745.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81654.t1 | Q9C895 | 52.0 | 564 | 250 | 3 | 1 | 544 | 295 | 857 | 5.7e-111 | 402.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81654.t1 | A0A072UR29 | 86.5 | 563 | 57 | 1 | 1 | 544 | 275 | 837 | 1.4e-211 | 745.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057026 | MS.gene81654 | 0.802746 | 4.85E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81654.t1 | MTR_5g085010 | 84.902 | 563 | 66 | 1 | 1 | 544 | 275 | 837 | 0.0 | 897 |
| MS.gene81654.t1 | MTR_1g068830 | 82.416 | 563 | 80 | 1 | 1 | 544 | 275 | 837 | 0.0 | 836 |
| MS.gene81654.t1 | MTR_5g065520 | 52.431 | 288 | 41 | 4 | 1 | 277 | 1 | 203 | 8.50e-73 | 238 |
| MS.gene81654.t1 | MTR_7g046250 | 28.622 | 566 | 381 | 5 | 1 | 544 | 270 | 834 | 1.64e-60 | 215 |
| MS.gene81654.t1 | MTR_7g046250 | 33.500 | 400 | 263 | 3 | 1 | 398 | 270 | 668 | 1.82e-57 | 204 |
| MS.gene81654.t1 | MTR_3g060950 | 68.217 | 129 | 24 | 3 | 418 | 544 | 61 | 174 | 4.38e-42 | 150 |
| MS.gene81654.t1 | MTR_8g064230 | 81.967 | 61 | 11 | 0 | 1 | 61 | 25 | 85 | 2.20e-24 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81654.t1 | AT1G55250 | 50.355 | 564 | 259 | 3 | 1 | 544 | 276 | 838 | 8.07e-168 | 498 |
| MS.gene81654.t1 | AT1G55250 | 50.355 | 564 | 259 | 3 | 1 | 544 | 295 | 857 | 1.93e-167 | 498 |
| MS.gene81654.t1 | AT1G55250 | 49.825 | 570 | 257 | 5 | 1 | 544 | 276 | 842 | 2.16e-163 | 488 |
| MS.gene81654.t1 | AT1G55250 | 50.742 | 337 | 146 | 2 | 228 | 544 | 4 | 340 | 2.91e-99 | 305 |
| MS.gene81654.t1 | AT1G55250 | 50.742 | 337 | 146 | 2 | 228 | 544 | 4 | 340 | 4.46e-99 | 305 |
| MS.gene81654.t1 | AT2G44950 | 29.982 | 547 | 360 | 5 | 19 | 544 | 291 | 835 | 1.41e-56 | 204 |
| MS.gene81654.t1 | AT2G44950 | 32.011 | 378 | 254 | 2 | 19 | 395 | 291 | 666 | 1.30e-45 | 171 |
Find 93 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCACATCTTTCTTAATT+TGG | 0.173663 | 5.1:+66900084 | None:intergenic |
| CAGAATTCAGCTCAGCAATT+TGG | 0.247609 | 5.1:+66899344 | None:intergenic |
| TTCCATCATCCCCATTTCTT+TGG | 0.250935 | 5.1:+66903983 | None:intergenic |
| GAAGGAATTGAATTCAAAAT+TGG | 0.254703 | 5.1:-66904272 | MS.gene81654:CDS |
| ACCTTTCATTTGCATCAAAC+TGG | 0.292093 | 5.1:+66901886 | None:intergenic |
| GTTACAGATTGAAAAGTTAC+AGG | 0.298097 | 5.1:-66902939 | MS.gene81654:intron |
| TTCAACTTTATCCAAAGAAA+TGG | 0.304326 | 5.1:-66903994 | MS.gene81654:CDS |
| TTGTTGTACTGCAGTTTCTT+TGG | 0.311776 | 5.1:+66899318 | None:intergenic |
| AGATGTGAAAGCACTTAAAA+AGG | 0.325070 | 5.1:-66900072 | MS.gene81654:CDS |
| AAGCTTGCGGAGAGAGCTAT+TGG | 0.326264 | 5.1:-66904907 | MS.gene81654:CDS |
| TCAACATTGGGTCGCTGAAT+TGG | 0.336707 | 5.1:-66904505 | MS.gene81654:CDS |
| TCAACTTTATCCAAAGAAAT+GGG | 0.348428 | 5.1:-66903993 | MS.gene81654:CDS |
| ATCATTGACAGCGTCTCTTC+AGG | 0.351431 | 5.1:-66904472 | MS.gene81654:intron |
| TTCCCACCTGGCAAACTCTA+AGG | 0.353582 | 5.1:+66900175 | None:intergenic |
| AGAGTTTGCCAGGTGGGAAT+TGG | 0.354577 | 5.1:-66900171 | MS.gene81654:CDS |
| CTTTCAGATTCTCTAACTTC+TGG | 0.356059 | 5.1:+66902053 | None:intergenic |
| TCAGGAGTTAGAATTTGTTC+TGG | 0.362139 | 5.1:-66902909 | MS.gene81654:CDS |
| AAAGTTACAGGAGGAGAATC+AGG | 0.371139 | 5.1:-66902927 | MS.gene81654:CDS |
| TGCAAACAAATGTGCTGAAC+AGG | 0.371578 | 5.1:-66903318 | MS.gene81654:CDS |
| ATACAGACCAATATCTTGTT+TGG | 0.372322 | 5.1:+66904129 | None:intergenic |
| AAGCTGAAATAGAGGAGTTA+AGG | 0.387376 | 5.1:-66901911 | MS.gene81654:CDS |
| CAAATGTGCTGAACAGGTTT+CGG | 0.397432 | 5.1:-66903312 | MS.gene81654:CDS |
| CACTTCCCGAGTATACTCTT+TGG | 0.403272 | 5.1:-66904541 | MS.gene81654:CDS |
| TCCATGACAATTCTTACTCT+TGG | 0.405292 | 5.1:-66904225 | MS.gene81654:CDS |
| CAAAGGATCAACTTCAACAT+TGG | 0.417137 | 5.1:-66904518 | MS.gene81654:CDS |
| GAATTTGTTCTGGATATGTA+TGG | 0.418424 | 5.1:-66902899 | MS.gene81654:CDS |
| GAAGCTTGAGGAAGAACTAA+TGG | 0.422228 | 5.1:-66899377 | MS.gene81654:CDS |
| CAGGATTAACGTCGCAAAAC+GGG | 0.432062 | 5.1:-66904296 | MS.gene81654:CDS |
| AGCTGAAATAGAGGAGTTAA+GGG | 0.438263 | 5.1:-66901910 | MS.gene81654:CDS |
| GATTGCAAATAGTGAAGAAC+AGG | 0.440368 | 5.1:-66900371 | MS.gene81654:intron |
| CTCTTTAGCTTTAATAGCCT+CGG | 0.449984 | 5.1:+66901392 | None:intergenic |
| AATATTGACAAAGCAATTTG+AGG | 0.451416 | 5.1:-66904714 | MS.gene81654:CDS |
| AAAGCAATTTGAGGAACGTC+AGG | 0.454193 | 5.1:-66904705 | MS.gene81654:intron |
| AATGCAAAAGGATGCAGCTA+TGG | 0.459490 | 5.1:-66904980 | MS.gene81654:CDS |
| TCCATTCACTGCATCAGCAT+TGG | 0.468808 | 5.1:+66904945 | None:intergenic |
| CAGCCGCCTTAGAGTTTGCC+AGG | 0.473338 | 5.1:-66900181 | MS.gene81654:CDS |
| GAAGAGGCCAAACAAGATAT+TGG | 0.475017 | 5.1:-66904136 | MS.gene81654:intron |
| CCTTTCATTTGCATCAAACT+GGG | 0.477201 | 5.1:+66901887 | None:intergenic |
| ATCCAAAGAAATGGGGATGA+TGG | 0.477782 | 5.1:-66903985 | MS.gene81654:CDS |
| AGTCAATCTTAAAATGCAAA+AGG | 0.490274 | 5.1:-66904992 | None:intergenic |
| AAAGGATCAACTTCAACATT+GGG | 0.491879 | 5.1:-66904517 | MS.gene81654:CDS |
| TCCAATGCTGATGCAGTGAA+TGG | 0.492882 | 5.1:-66904946 | MS.gene81654:CDS |
| CGCCTTAGAGTTTGCCAGGT+GGG | 0.494648 | 5.1:-66900177 | MS.gene81654:CDS |
| TTATGTCATGCAGGAATTCA+CGG | 0.495938 | 5.1:-66899402 | MS.gene81654:intron |
| ATTCACTGCATCAGCATTGG+AGG | 0.496003 | 5.1:+66904948 | None:intergenic |
| TAACGTCGCAAAACGGGAGA+AGG | 0.501737 | 5.1:-66904290 | MS.gene81654:CDS |
| CGAGGCTATTAAAGCTAAAG+AGG | 0.502369 | 5.1:-66901391 | MS.gene81654:CDS |
| CCTTTGCCAAAGAGTATACT+CGG | 0.508295 | 5.1:+66904535 | None:intergenic |
| AATAAAGTCTTCAAAAGCAC+TGG | 0.512072 | 5.1:-66903288 | MS.gene81654:intron |
| GCAGGATTAACGTCGCAAAA+CGG | 0.514032 | 5.1:-66904297 | MS.gene81654:CDS |
| CCCAGTTTGATGCAAATGAA+AGG | 0.514393 | 5.1:-66901887 | MS.gene81654:intron |
| GTCTGGAGGATTATCAGAAA+AGG | 0.516683 | 5.1:-66902877 | MS.gene81654:intron |
| GTTCAGCACATTTGTTTGCA+AGG | 0.516708 | 5.1:+66903321 | None:intergenic |
| CTGTTGAAGTTGATCAGCTA+AGG | 0.522647 | 5.1:+66900426 | None:intergenic |
| CTCCTCTATTTCAGCTTGTG+CGG | 0.531566 | 5.1:+66901917 | None:intergenic |
| CTCAATTGAATTCTTCAACT+CGG | 0.534133 | 5.1:+66904879 | None:intergenic |
| TGCAAAGGTGTATTAATGAA+AGG | 0.535858 | 5.1:-66904180 | MS.gene81654:CDS |
| ATGCAAAAGGATGCAGCTAT+GGG | 0.538574 | 5.1:-66904979 | MS.gene81654:CDS |
| TGTTCTGGATATGTATGGTC+TGG | 0.538996 | 5.1:-66902894 | MS.gene81654:CDS |
| GAATTCAATTGAGGATGCCA+AGG | 0.545808 | 5.1:-66904869 | MS.gene81654:intron |
| TGCCGCACAAGCTGAAATAG+AGG | 0.551371 | 5.1:-66901919 | MS.gene81654:CDS |
| CGAGTTGAAGAATTCAATTG+AGG | 0.553266 | 5.1:-66904878 | MS.gene81654:CDS |
| AGCTCAAGATTCAGTTGCAA+AGG | 0.555949 | 5.1:-66904195 | MS.gene81654:CDS |
| CGAACATCTGTTGCAGCAAG+TGG | 0.558223 | 5.1:-66901200 | MS.gene81654:CDS |
| TCCAAGAGTAAGAATTGTCA+TGG | 0.558553 | 5.1:+66904224 | None:intergenic |
| CGCTAAGAGCGAAATTGAGT+GGG | 0.564592 | 5.1:-66903896 | MS.gene81654:CDS |
| GAGGGATGACTATAATATCA+AGG | 0.565391 | 5.1:-66901173 | MS.gene81654:intron |
| AAAAGGAATTGGGTAGTGAA+AGG | 0.571263 | 5.1:-66900055 | MS.gene81654:intron |
| GGAATTGGCTGATGCTGAGA+AGG | 0.575750 | 5.1:-66900156 | MS.gene81654:CDS |
| CCGAGTATACTCTTTGGCAA+AGG | 0.579298 | 5.1:-66904535 | MS.gene81654:CDS |
| TCTTGAAATCAAGATGGAAG+AGG | 0.579606 | 5.1:-66904152 | MS.gene81654:CDS |
| GAATGATCTTGAAATCAAGA+TGG | 0.585926 | 5.1:-66904158 | MS.gene81654:CDS |
| TCGCTAAGAGCGAAATTGAG+TGG | 0.587048 | 5.1:-66903897 | MS.gene81654:CDS |
| TCTGGATATGTATGGTCTGG+AGG | 0.592235 | 5.1:-66902891 | MS.gene81654:CDS |
| AGCATCAGCCAATTCCCACC+TGG | 0.596588 | 5.1:+66900163 | None:intergenic |
| CTGAAGCTGCTTATGAACAA+AGG | 0.599555 | 5.1:-66901947 | MS.gene81654:CDS |
| AATCTATATATCTGAAATCG+AGG | 0.602034 | 5.1:-66901358 | MS.gene81654:intron |
| CAACTTTATCCAAAGAAATG+GGG | 0.604001 | 5.1:-66903992 | MS.gene81654:CDS |
| CTGTTCTGACCGTCCAAAGG+AGG | 0.610575 | 5.1:-66899248 | None:intergenic |
| TTGTCATAGATAGTGAATGC+TGG | 0.615633 | 5.1:-66904776 | MS.gene81654:intron |
| GTTGCAGCAAGTGGCTGAGA+GGG | 0.621288 | 5.1:-66901191 | MS.gene81654:CDS |
| TGGAGTCTGCTGTGAATGCA+AGG | 0.625299 | 5.1:-66904252 | MS.gene81654:CDS |
| TGTCTGTTCTGACCGTCCAA+AGG | 0.626715 | 5.1:-66899251 | MS.gene81654:CDS |
| GAGCTTCAAGATGCACGCGA+AGG | 0.633462 | 5.1:-66904743 | MS.gene81654:CDS |
| TGTTGCAGCAAGTGGCTGAG+AGG | 0.640275 | 5.1:-66901192 | MS.gene81654:CDS |
| GAATTCACGGAAGAAGCTTG+AGG | 0.650116 | 5.1:-66899389 | MS.gene81654:CDS |
| ACAGATTGAAAAGTTACAGG+AGG | 0.653733 | 5.1:-66902936 | MS.gene81654:intron |
| AAGAGCGAAATTGAGTGGGA+AGG | 0.655269 | 5.1:-66903892 | MS.gene81654:intron |
| CTTTGCCAAAGAGTATACTC+GGG | 0.675113 | 5.1:+66904536 | None:intergenic |
| CTCGTCTCGTGAGAAGCTTG+CGG | 0.682599 | 5.1:-66904920 | MS.gene81654:CDS |
| CAAACTCTAAGGCGGCTGTG+AGG | 0.702116 | 5.1:+66900186 | None:intergenic |
| CCGCCTTAGAGTTTGCCAGG+TGG | 0.711057 | 5.1:-66900178 | MS.gene81654:CDS |
| CCACCTGGCAAACTCTAAGG+CGG | 0.716860 | 5.1:+66900178 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATAAATATAAGTAG+GGG | + | chr5.1:66903908-66903927 | None:intergenic | 10.0% |
| !!! | AAAAAATAAATGAATTTTGA+AGG | + | chr5.1:66901845-66901864 | None:intergenic | 10.0% |
| !!! | GATATTTGATTTTTATTTTT+TGG | - | chr5.1:66899862-66899881 | MS.gene81654:intron | 10.0% |
| !! | ATAAAATAAATATAAGTAGG+GGG | + | chr5.1:66903907-66903926 | None:intergenic | 15.0% |
| !! | ATTAAATTTAATCTCAAATG+AGG | + | chr5.1:66901053-66901072 | None:intergenic | 15.0% |
| !! | ATTTAGTCTAGTTAATTTAT+TGG | - | chr5.1:66901407-66901426 | MS.gene81654:CDS | 15.0% |
| !! | TCTACATAAATAATTCAATT+TGG | - | chr5.1:66903674-66903693 | MS.gene81654:intron | 15.0% |
| !!! | ATTTAATTTTGTAAGAAATG+AGG | + | chr5.1:66900170-66900189 | None:intergenic | 15.0% |
| !!! | GTTTTTGTAATTAAAATGAA+GGG | + | chr5.1:66903279-66903298 | None:intergenic | 15.0% |
| !!! | TGTTATTGTTTTTTTGAAAA+GGG | + | chr5.1:66903444-66903463 | None:intergenic | 15.0% |
| !!! | TGTTGTTAATTTTTAAGAAA+TGG | - | chr5.1:66900523-66900542 | MS.gene81654:intron | 15.0% |
| !!! | TTGTTATTGTTTTTTTGAAA+AGG | + | chr5.1:66903445-66903464 | None:intergenic | 15.0% |
| !!! | TTTTTTTCAAAGGTTTTTAT+AGG | - | chr5.1:66903324-66903343 | MS.gene81654:CDS | 15.0% |
| !! | AAAACATATTTATAGTTGGT+GGG | - | chr5.1:66900688-66900707 | MS.gene81654:intron | 20.0% |
| !! | AATCAAAAAAAGTAAAACCT+TGG | + | chr5.1:66899379-66899398 | None:intergenic | 20.0% |
| !! | ACAATGAAAAGTTATTTGTA+AGG | - | chr5.1:66903358-66903377 | MS.gene81654:intron | 20.0% |
| !! | AGATAAAAAAACCACAAATA+TGG | + | chr5.1:66902456-66902475 | None:intergenic | 20.0% |
| !! | CTTATTCCAACAAATTAATT+CGG | + | chr5.1:66901467-66901486 | None:intergenic | 20.0% |
| !! | GATAAATAAACAATAACTAG+TGG | - | chr5.1:66903416-66903435 | MS.gene81654:intron | 20.0% |
| !! | TAAAATAAATATAAGTAGGG+GGG | + | chr5.1:66903906-66903925 | None:intergenic | 20.0% |
| !! | TCTGAAAACATATTTATAGT+TGG | - | chr5.1:66900684-66900703 | MS.gene81654:intron | 20.0% |
| !! | TTACAAAATTAAATGTCTCA+GGG | - | chr5.1:66900176-66900195 | MS.gene81654:CDS | 20.0% |
| !! | TTATGTTTCTTTGTTAACAT+TGG | - | chr5.1:66902696-66902715 | MS.gene81654:intron | 20.0% |
| !! | TTTGCAATATGATAAAAACA+AGG | + | chr5.1:66903711-66903730 | None:intergenic | 20.0% |
| !!! | AACCTTTGAAAAAAAAGAAA+CGG | + | chr5.1:66903319-66903338 | None:intergenic | 20.0% |
| !!! | ACCTTTCAAAATACAATTTT+AGG | - | chr5.1:66899905-66899924 | MS.gene81654:intron | 20.0% |
| !!! | ATATTTGTGGTTTTTTTATC+TGG | - | chr5.1:66902455-66902474 | MS.gene81654:intron | 20.0% |
| !!! | ATGAATTAGTGATATTGTTT+TGG | - | chr5.1:66904365-66904384 | MS.gene81654:intron | 20.0% |
| !!! | CGTTTTTGTAATTAAAATGA+AGG | + | chr5.1:66903280-66903299 | None:intergenic | 20.0% |
| !!! | GATAAATGTTTTATTGCATT+TGG | - | chr5.1:66902060-66902079 | MS.gene81654:CDS | 20.0% |
| !!! | TAAATAATTCAATTTGGTGT+TGG | - | chr5.1:66903680-66903699 | MS.gene81654:intron | 20.0% |
| !!! | TATTTGTGGTTTTTTTATCT+GGG | - | chr5.1:66902456-66902475 | MS.gene81654:intron | 20.0% |
| !!! | TGAATTAGTGATATTGTTTT+GGG | - | chr5.1:66904366-66904385 | MS.gene81654:intron | 20.0% |
| ! | AAAAGTTTATGTAGAGTTCA+AGG | - | chr5.1:66902520-66902539 | MS.gene81654:intron | 25.0% |
| ! | AAAATAAATATAAGTAGGGG+GGG | + | chr5.1:66903905-66903924 | None:intergenic | 25.0% |
| ! | AAAATGTATTCCAGTTTAGT+AGG | + | chr5.1:66900776-66900795 | None:intergenic | 25.0% |
| ! | AAACAGAAAAAAGTTGAGTT+TGG | - | chr5.1:66904527-66904546 | MS.gene81654:CDS | 25.0% |
| ! | AAGCGGTACATAAAATAATA+AGG | + | chr5.1:66901784-66901803 | None:intergenic | 25.0% |
| ! | AATATTGACAAAGCAATTTG+AGG | - | chr5.1:66899514-66899533 | MS.gene81654:intron | 25.0% |
| ! | ACATTATTAAAATCAGCAAG+CGG | + | chr5.1:66901801-66901820 | None:intergenic | 25.0% |
| ! | AGATGAGAAAGAAAATGAAA+TGG | + | chr5.1:66900381-66900400 | None:intergenic | 25.0% |
| ! | ATAAACTTCTGTTAGTTGAT+GGG | - | chr5.1:66902918-66902937 | MS.gene81654:CDS | 25.0% |
| ! | ATAGTTAAACCTTAAGAAGT+TGG | + | chr5.1:66902026-66902045 | None:intergenic | 25.0% |
| ! | ATTAACACATATCTCATGTA+GGG | + | chr5.1:66904719-66904738 | None:intergenic | 25.0% |
| ! | ATTCTTGATCAAAAAAATGC+TGG | - | chr5.1:66901962-66901981 | MS.gene81654:CDS | 25.0% |
| ! | CTTACAAAATTAAATGTCTC+AGG | - | chr5.1:66900175-66900194 | MS.gene81654:CDS | 25.0% |
| ! | CTTTCACATCTTTCTTAATT+TGG | + | chr5.1:66904147-66904166 | None:intergenic | 25.0% |
| ! | GAAAACATATTTATAGTTGG+TGG | - | chr5.1:66900687-66900706 | MS.gene81654:intron | 25.0% |
| ! | GAAGGAATTGAATTCAAAAT+TGG | - | chr5.1:66899956-66899975 | MS.gene81654:intron | 25.0% |
| ! | GCTACTATTCAGAAAAAATT+TGG | - | chr5.1:66902807-66902826 | MS.gene81654:intron | 25.0% |
| ! | TAATTTCAAACGACTCATTA+AGG | - | chr5.1:66901260-66901279 | MS.gene81654:intron | 25.0% |
| ! | TACATTAATTGTTGAAGAAC+TGG | - | chr5.1:66903242-66903261 | MS.gene81654:intron | 25.0% |
| ! | TAGTTAAACCTTAAGAAGTT+GGG | + | chr5.1:66902025-66902044 | None:intergenic | 25.0% |
| ! | TATAAACTTCTGTTAGTTGA+TGG | - | chr5.1:66902917-66902936 | MS.gene81654:CDS | 25.0% |
| ! | TCAACTTTATCCAAAGAAAT+GGG | - | chr5.1:66900235-66900254 | MS.gene81654:CDS | 25.0% |
| ! | TCTGTAGATACTTTCATTTA+TGG | - | chr5.1:66901997-66902016 | MS.gene81654:CDS | 25.0% |
| ! | TGAAGTCATTAAATTCAAAG+AGG | + | chr5.1:66900810-66900829 | None:intergenic | 25.0% |
| ! | TTAACACCTAACATAGAATT+TGG | + | chr5.1:66901528-66901547 | None:intergenic | 25.0% |
| ! | TTAATCTCAAATGAGGAAAA+TGG | + | chr5.1:66901046-66901065 | None:intergenic | 25.0% |
| ! | TTCAACTTTATCCAAAGAAA+TGG | - | chr5.1:66900234-66900253 | MS.gene81654:CDS | 25.0% |
| !! | AAAGCACTTAAAAAGGAATT+GGG | - | chr5.1:66904163-66904182 | MS.gene81654:CDS | 25.0% |
| !! | AATCTATATATCTGAAATCG+AGG | - | chr5.1:66902870-66902889 | MS.gene81654:intron | 25.0% |
| !! | CATGAAAAGATTCTTTTACA+TGG | + | chr5.1:66899623-66899642 | None:intergenic | 25.0% |
| !! | TATCATCATTTAGTTCATTC+TGG | + | chr5.1:66899657-66899676 | None:intergenic | 25.0% |
| !! | TCTAAAGGAGCATAATATAT+CGG | + | chr5.1:66902560-66902579 | None:intergenic | 25.0% |
| !! | TTCAAAATACAATTTTAGGC+TGG | - | chr5.1:66899909-66899928 | MS.gene81654:intron | 25.0% |
| !!! | GAATTAGTGATATTGTTTTG+GGG | - | chr5.1:66904367-66904386 | MS.gene81654:intron | 25.0% |
| !!! | GATATACCGAATTAATTTGT+TGG | - | chr5.1:66901458-66901477 | MS.gene81654:intron | 25.0% |
| !!! | GCCTAAAATTGTATTTTGAA+AGG | + | chr5.1:66899909-66899928 | None:intergenic | 25.0% |
| !!! | GTTACTTTTACATAGTATAG+AGG | - | chr5.1:66900465-66900484 | MS.gene81654:intron | 25.0% |
| !!! | TCATTTATTTTTTCCACCAT+TGG | - | chr5.1:66901852-66901871 | MS.gene81654:intron | 25.0% |
| !!! | TTTTGAAAGGTGTATGTAAA+AGG | + | chr5.1:66899896-66899915 | None:intergenic | 25.0% |
| AAAATCACATCTTGTAGCAA+AGG | + | chr5.1:66901568-66901587 | None:intergenic | 30.0% | |
| AAAGGATCAACTTCAACATT+GGG | - | chr5.1:66899711-66899730 | MS.gene81654:intron | 30.0% | |
| AAGAGAAAACTCTCAAAAGA+TGG | + | chr5.1:66904610-66904629 | None:intergenic | 30.0% | |
| AATACAAACTAAGCAACCAT+GGG | + | chr5.1:66904474-66904493 | None:intergenic | 30.0% | |
| AATGTTATGCATACATGACA+GGG | - | chr5.1:66904736-66904755 | MS.gene81654:CDS | 30.0% | |
| AGAAGTTAGGCATAGAAAAA+TGG | + | chr5.1:66903131-66903150 | None:intergenic | 30.0% | |
| ATACAGACCAATATCTTGTT+TGG | + | chr5.1:66900102-66900121 | None:intergenic | 30.0% | |
| ATATCTGCTCGAAAAAACTT+TGG | - | chr5.1:66903492-66903511 | MS.gene81654:intron | 30.0% | |
| ATCAACAAATGAATGACACA+AGG | + | chr5.1:66899407-66899426 | None:intergenic | 30.0% | |
| ATCACAATGCAGATAATGTT+TGG | + | chr5.1:66901216-66901235 | None:intergenic | 30.0% | |
| ATTCTGTGTCTGCAAAAATA+CGG | + | chr5.1:66904576-66904595 | None:intergenic | 30.0% | |
| ATTGGTTGTCTTCATATGAA+TGG | - | chr5.1:66902714-66902733 | MS.gene81654:intron | 30.0% | |
| CAACTTTATCCAAAGAAATG+GGG | - | chr5.1:66900236-66900255 | MS.gene81654:CDS | 30.0% | |
| CATTAACACATATCTCATGT+AGG | + | chr5.1:66904720-66904739 | None:intergenic | 30.0% | |
| CTCAATTGAATTCTTCAACT+CGG | + | chr5.1:66899352-66899371 | None:intergenic | 30.0% | |
| GAATGATCTTGAAATCAAGA+TGG | - | chr5.1:66900070-66900089 | MS.gene81654:CDS | 30.0% | |
| GGCAAATACATACTTCAAAT+GGG | - | chr5.1:66901936-66901955 | MS.gene81654:CDS | 30.0% | |
| GTTACAGATTGAAAAGTTAC+AGG | - | chr5.1:66901289-66901308 | MS.gene81654:intron | 30.0% | |
| GTTGAAGAACTAAATACCTA+CGG | + | chr5.1:66900992-66901011 | None:intergenic | 30.0% | |
| TAATACAAACTAAGCAACCA+TGG | + | chr5.1:66904475-66904494 | None:intergenic | 30.0% | |
| TAATGTTATGCATACATGAC+AGG | - | chr5.1:66904735-66904754 | MS.gene81654:CDS | 30.0% | |
| TCACAATGCAGATAATGTTT+GGG | + | chr5.1:66901215-66901234 | None:intergenic | 30.0% | |
| TCTTGTAGCAAAGGAAAAAT+AGG | + | chr5.1:66901559-66901578 | None:intergenic | 30.0% | |
| TGCAAAACACAACAAAACAA+AGG | + | chr5.1:66901162-66901181 | None:intergenic | 30.0% | |
| TGGCAAATACATACTTCAAA+TGG | - | chr5.1:66901935-66901954 | MS.gene81654:CDS | 30.0% | |
| TTGAAGAACTAAATACCTAC+GGG | + | chr5.1:66900991-66901010 | None:intergenic | 30.0% | |
| TTTCTCATCTACTTTGTGAT+AGG | - | chr5.1:66900391-66900410 | MS.gene81654:CDS | 30.0% | |
| ! | AAAGGCACAATAAATGTTAG+TGG | - | chr5.1:66900571-66900590 | MS.gene81654:intron | 30.0% |
| ! | AATAAAGTCTTCAAAAGCAC+TGG | - | chr5.1:66900940-66900959 | MS.gene81654:intron | 30.0% |
| ! | CTTTTACATAGTATAGAGGT+TGG | - | chr5.1:66900469-66900488 | MS.gene81654:intron | 30.0% |
| ! | GAATTTGTTCTGGATATGTA+TGG | - | chr5.1:66901329-66901348 | MS.gene81654:intron | 30.0% |
| ! | GTGGATTTTTACTGTTTGAA+AGG | - | chr5.1:66903576-66903595 | MS.gene81654:intron | 30.0% |
| ! | TACGGAACAGATTTTTAAAC+AGG | - | chr5.1:66904231-66904250 | MS.gene81654:CDS | 30.0% |
| ! | TATCTGCATTGTGATTTTAG+AGG | - | chr5.1:66901221-66901240 | MS.gene81654:CDS | 30.0% |
| ! | TGCAAAGGTGTATTAATGAA+AGG | - | chr5.1:66900048-66900067 | MS.gene81654:intron | 30.0% |
| !! | AATGAATTTTGAAGGAACAG+TGG | + | chr5.1:66901837-66901856 | None:intergenic | 30.0% |
| !! | AATGTTAGTGCTTTGGAAAA+AGG | - | chr5.1:66900553-66900572 | MS.gene81654:intron | 30.0% |
| !! | AGATGTGAAAGCACTTAAAA+AGG | - | chr5.1:66904156-66904175 | MS.gene81654:CDS | 30.0% |
| !! | GAAAGCACTTAAAAAGGAAT+TGG | - | chr5.1:66904162-66904181 | MS.gene81654:CDS | 30.0% |
| !! | GATATGCTCTAAGATTTAGA+AGG | + | chr5.1:66901096-66901115 | None:intergenic | 30.0% |
| !! | GCTGATTTTAATAATGTGCA+TGG | - | chr5.1:66901804-66901823 | MS.gene81654:intron | 30.0% |
| !! | TACTTCAAGTTTTTGCAATC+AGG | - | chr5.1:66904496-66904515 | MS.gene81654:CDS | 30.0% |
| !! | TTCTTTTGCTAGTTTCACAT+TGG | + | chr5.1:66903387-66903406 | None:intergenic | 30.0% |
| !!! | CTCCGTTTCTTTTTTTTCAA+AGG | - | chr5.1:66903314-66903333 | MS.gene81654:CDS | 30.0% |
| AAAAAATTTGGAGATGACCG+AGG | - | chr5.1:66902819-66902838 | MS.gene81654:intron | 35.0% | |
| AAAAGGAATTGGGTAGTGAA+AGG | - | chr5.1:66904173-66904192 | MS.gene81654:CDS | 35.0% | |
| AAACTTGAATACAGGAGATC+AGG | + | chr5.1:66901705-66901724 | None:intergenic | 35.0% | |
| AACTTGAATACAGGAGATCA+GGG | + | chr5.1:66901704-66901723 | None:intergenic | 35.0% | |
| AAGCTGAAATAGAGGAGTTA+AGG | - | chr5.1:66902317-66902336 | MS.gene81654:intron | 35.0% | |
| AATGACTTCACAAATCATGC+TGG | - | chr5.1:66900820-66900839 | MS.gene81654:intron | 35.0% | |
| ACAAAAAACATGCTGGAGAT+TGG | + | chr5.1:66901636-66901655 | None:intergenic | 35.0% | |
| ACAGATTGAAAAGTTACAGG+AGG | - | chr5.1:66901292-66901311 | MS.gene81654:intron | 35.0% | |
| ACCTTTCATTTGCATCAAAC+TGG | + | chr5.1:66902345-66902364 | None:intergenic | 35.0% | |
| ACTATGAAGACGCTATCTAA+AGG | + | chr5.1:66902575-66902594 | None:intergenic | 35.0% | |
| AGCTGAAATAGAGGAGTTAA+GGG | - | chr5.1:66902318-66902337 | MS.gene81654:intron | 35.0% | |
| AGTTCAAGGACTTTGTTCTT+TGG | - | chr5.1:66902534-66902553 | MS.gene81654:intron | 35.0% | |
| ATAGTAGCGCAGATAAAACA+TGG | + | chr5.1:66902795-66902814 | None:intergenic | 35.0% | |
| ATATGAAATGCCCTCTCAAT+TGG | - | chr5.1:66904783-66904802 | MS.gene81654:intron | 35.0% | |
| ATCAACAGATTGATAAGCAG+AGG | + | chr5.1:66902761-66902780 | None:intergenic | 35.0% | |
| ATCCACCAAAACTTGAATAC+AGG | + | chr5.1:66901713-66901732 | None:intergenic | 35.0% | |
| ATGTATTTGCCATCCTCAAA+GGG | + | chr5.1:66901927-66901946 | None:intergenic | 35.0% | |
| CAAAGGATCAACTTCAACAT+TGG | - | chr5.1:66899710-66899729 | MS.gene81654:intron | 35.0% | |
| CAGAACTGACTATTATACCA+AGG | + | chr5.1:66904436-66904455 | None:intergenic | 35.0% | |
| CAGATAATGTTTGGGAATCA+TGG | + | chr5.1:66901207-66901226 | None:intergenic | 35.0% | |
| CATCACAGACTCAAAATATC+TGG | + | chr5.1:66900435-66900454 | None:intergenic | 35.0% | |
| CCTTTCATTTGCATCAAACT+GGG | + | chr5.1:66902344-66902363 | None:intergenic | 35.0% | |
| CTTGGTATAATAGTCAGTTC+TGG | - | chr5.1:66904434-66904453 | MS.gene81654:intron | 35.0% | |
| CTTTCAGATTCTCTAACTTC+TGG | + | chr5.1:66902178-66902197 | None:intergenic | 35.0% | |
| GAATTCCTGCATGACATAAT+TGG | + | chr5.1:66904825-66904844 | None:intergenic | 35.0% | |
| GAGGGATGACTATAATATCA+AGG | - | chr5.1:66903055-66903074 | MS.gene81654:intron | 35.0% | |
| GATTGCAAATAGTGAAGAAC+AGG | - | chr5.1:66903857-66903876 | MS.gene81654:intron | 35.0% | |
| TAACTCAACCCTTACAAAAC+CGG | + | chr5.1:66900739-66900758 | None:intergenic | 35.0% | |
| TATGTATTTGCCATCCTCAA+AGG | + | chr5.1:66901928-66901947 | None:intergenic | 35.0% | |
| TCAAACAGTAAAAATCCACC+AGG | + | chr5.1:66903575-66903594 | None:intergenic | 35.0% | |
| TCAAATCTATTCTCCCTTTG+AGG | - | chr5.1:66901911-66901930 | MS.gene81654:CDS | 35.0% | |
| TCCAAGAGTAAGAATTGTCA+TGG | + | chr5.1:66900007-66900026 | None:intergenic | 35.0% | |
| TCCATGACAATTCTTACTCT+TGG | - | chr5.1:66900003-66900022 | MS.gene81654:intron | 35.0% | |
| TCGATTACACAAACTTACGA+AGG | + | chr5.1:66904346-66904365 | None:intergenic | 35.0% | |
| TCGTTATTCTCTGTTGTGTT+TGG | - | chr5.1:66901432-66901451 | MS.gene81654:intron | 35.0% | |
| TCTTGAAATCAAGATGGAAG+AGG | - | chr5.1:66900076-66900095 | MS.gene81654:CDS | 35.0% | |
| TGAAGAGTTACCTACTAAAC+TGG | - | chr5.1:66900763-66900782 | MS.gene81654:intron | 35.0% | |
| TGCATGCCAAATTCTATGTT+AGG | - | chr5.1:66901519-66901538 | MS.gene81654:intron | 35.0% | |
| TTATGTCATGCAGGAATTCA+CGG | - | chr5.1:66904826-66904845 | MS.gene81654:intron | 35.0% | |
| TTCACTGAATGTTAGTGCTT+TGG | - | chr5.1:66900546-66900565 | MS.gene81654:intron | 35.0% | |
| TTGTCATAGATAGTGAATGC+TGG | - | chr5.1:66899452-66899471 | MS.gene81654:intron | 35.0% | |
| TTGTTGTACTGCAGTTTCTT+TGG | + | chr5.1:66904913-66904932 | None:intergenic | 35.0% | |
| ! | AAATACAATTTTAGGCTGGC+AGG | - | chr5.1:66899913-66899932 | MS.gene81654:intron | 35.0% |
| ! | AATGTTTTCCTGTAGACTAC+TGG | - | chr5.1:66902975-66902994 | MS.gene81654:intron | 35.0% |
| ! | ATAATAGTCAGTTCTGGTGT+CGG | - | chr5.1:66904440-66904459 | MS.gene81654:intron | 35.0% |
| ! | ATTCTTTTACATGGAACCCT+GGG | + | chr5.1:66899614-66899633 | None:intergenic | 35.0% |
| ! | CAAATCAATTTTCTCAGTCC+TGG | - | chr5.1:66903554-66903573 | MS.gene81654:intron | 35.0% |
| ! | CGAGTTGAAGAATTCAATTG+AGG | - | chr5.1:66899350-66899369 | MS.gene81654:CDS | 35.0% |
| ! | GGAACAGATTTTTAAACAGG+TGG | - | chr5.1:66904234-66904253 | MS.gene81654:CDS | 35.0% |
| ! | GTCTAAAGTTGGATGAGATA+TGG | - | chr5.1:66900661-66900680 | MS.gene81654:intron | 35.0% |
| ! | GTTGTTCTTTTCTGTCTACT+TGG | - | chr5.1:66902122-66902141 | MS.gene81654:intron | 35.0% |
| ! | TATGCACACTACACTGATTA+TGG | - | chr5.1:66902372-66902391 | MS.gene81654:intron | 35.0% |
| ! | TCAGGAGTTAGAATTTGTTC+TGG | - | chr5.1:66901319-66901338 | MS.gene81654:intron | 35.0% |
| ! | TTATCTGGGAGTGAATTTTC+TGG | - | chr5.1:66902470-66902489 | MS.gene81654:intron | 35.0% |
| ! | TTCTGTCTAAGATATGTGCT+TGG | - | chr5.1:66899426-66899445 | MS.gene81654:intron | 35.0% |
| !! | ATACATGACAGGGTTGATTT+TGG | - | chr5.1:66904746-66904765 | MS.gene81654:CDS | 35.0% |
| !! | CTCTTTAGCTTTAATAGCCT+CGG | + | chr5.1:66902839-66902858 | None:intergenic | 35.0% |
| !! | GATCTCCTGTATTCAAGTTT+TGG | - | chr5.1:66901705-66901724 | MS.gene81654:intron | 35.0% |
| !!! | ATTCAAGTTTTGGTGGATTC+TGG | - | chr5.1:66901715-66901734 | MS.gene81654:intron | 35.0% |
| !!! | CGCTTTTAGTTCCATATTTG+TGG | - | chr5.1:66902442-66902461 | MS.gene81654:intron | 35.0% |
| !!! | GTGATATTGTTTTGGGGTTA+AGG | - | chr5.1:66904373-66904392 | MS.gene81654:intron | 35.0% |
| !!! | TGTTTTGGGGTTAAGGAAAT+GGG | - | chr5.1:66904380-66904399 | MS.gene81654:intron | 35.0% |
| !!! | TTCAAGTTTTGGTGGATTCT+GGG | - | chr5.1:66901716-66901735 | MS.gene81654:intron | 35.0% |
| !!! | TTGTTTTGGGGTTAAGGAAA+TGG | - | chr5.1:66904379-66904398 | MS.gene81654:intron | 35.0% |
| AAAACGAATTATCAGCTGGC+TGG | + | chr5.1:66903519-66903538 | None:intergenic | 40.0% | |
| AAAGCAATTTGAGGAACGTC+AGG | - | chr5.1:66899523-66899542 | MS.gene81654:intron | 40.0% | |
| AAAGTTACAGGAGGAGAATC+AGG | - | chr5.1:66901301-66901320 | MS.gene81654:intron | 40.0% | |
| AAATGGTGAAGAACACAGCA+AGG | + | chr5.1:66903114-66903133 | None:intergenic | 40.0% | |
| AATTGAGATGTATGTACCCC+AGG | - | chr5.1:66899594-66899613 | MS.gene81654:intron | 40.0% | |
| ACACACTAAACCTCACTTAG+TGG | + | chr5.1:66904289-66904308 | None:intergenic | 40.0% | |
| ACCTAGACATTGCAGAAGTT+AGG | + | chr5.1:66903144-66903163 | None:intergenic | 40.0% | |
| ACTAAACCTCACTTAGTGGA+GGG | + | chr5.1:66904285-66904304 | None:intergenic | 40.0% | |
| AGCTCAAGATTCAGTTGCAA+AGG | - | chr5.1:66900033-66900052 | MS.gene81654:intron | 40.0% | |
| AGGACTGGACATCTAGATAA+CGG | + | chr5.1:66900627-66900646 | None:intergenic | 40.0% | |
| ATCCAAAGAAATGGGGATGA+TGG | - | chr5.1:66900243-66900262 | MS.gene81654:intron | 40.0% | |
| ATGCAAAAGGATGCAGCTAT+GGG | - | chr5.1:66899249-66899268 | MS.gene81654:CDS | 40.0% | |
| ATGTGTTGAGCCAATTGAGA+GGG | + | chr5.1:66904796-66904815 | None:intergenic | 40.0% | |
| ATTGAGATGTATGTACCCCA+GGG | - | chr5.1:66899595-66899614 | MS.gene81654:intron | 40.0% | |
| CAAATGTGCTGAACAGGTTT+CGG | - | chr5.1:66900916-66900935 | MS.gene81654:intron | 40.0% | |
| CACCAAAACGAATTATCAGC+TGG | + | chr5.1:66903523-66903542 | None:intergenic | 40.0% | |
| CAGAATTCAGCTCAGCAATT+TGG | + | chr5.1:66904887-66904906 | None:intergenic | 40.0% | |
| CATTCGATCAAGTCTGGATA+CGG | - | chr5.1:66904213-66904232 | MS.gene81654:CDS | 40.0% | |
| CCCAGTTTGATGCAAATGAA+AGG | - | chr5.1:66902341-66902360 | MS.gene81654:intron | 40.0% | |
| CGAGGCTATTAAAGCTAAAG+AGG | - | chr5.1:66902837-66902856 | MS.gene81654:intron | 40.0% | |
| CTCATCCAATTATGTCATGC+AGG | - | chr5.1:66904817-66904836 | MS.gene81654:intron | 40.0% | |
| CTGAAGCTGCTTATGAACAA+AGG | - | chr5.1:66902281-66902300 | MS.gene81654:intron | 40.0% | |
| CTTACTCATTCGATCAAGTC+TGG | - | chr5.1:66904207-66904226 | MS.gene81654:CDS | 40.0% | |
| GAAGAGGCCAAACAAGATAT+TGG | - | chr5.1:66900092-66900111 | MS.gene81654:CDS | 40.0% | |
| GAAGCTTGAGGAAGAACTAA+TGG | - | chr5.1:66904851-66904870 | MS.gene81654:intron | 40.0% | |
| GAATTCAATTGAGGATGCCA+AGG | - | chr5.1:66899359-66899378 | MS.gene81654:CDS | 40.0% | |
| GAGGGAAACAAAAAACATGC+TGG | + | chr5.1:66901643-66901662 | None:intergenic | 40.0% | |
| GAGTCTGTGATGATCTTGTA+TGG | - | chr5.1:66900443-66900462 | MS.gene81654:intron | 40.0% | |
| GCTTGTCTGCTTCAAAACAA+AGG | + | chr5.1:66900876-66900895 | None:intergenic | 40.0% | |
| GTCTGGAGGATTATCAGAAA+AGG | - | chr5.1:66901351-66901370 | MS.gene81654:intron | 40.0% | |
| GTTCAGCACATTTGTTTGCA+AGG | + | chr5.1:66900910-66900929 | None:intergenic | 40.0% | |
| TATGTGTTGAGCCAATTGAG+AGG | + | chr5.1:66904797-66904816 | None:intergenic | 40.0% | |
| TGCAAACAAATGTGCTGAAC+AGG | - | chr5.1:66900910-66900929 | MS.gene81654:intron | 40.0% | |
| TTATCTAGATGTCCAGTCCT+GGG | - | chr5.1:66900627-66900646 | MS.gene81654:intron | 40.0% | |
| TTATGGTGCCCAACTTCTTA+AGG | - | chr5.1:66902014-66902033 | MS.gene81654:CDS | 40.0% | |
| TTCCATCATCCCCATTTCTT+TGG | + | chr5.1:66900248-66900267 | None:intergenic | 40.0% | |
| TTGTAACAGTTGTCTGATGC+AGG | - | chr5.1:66902613-66902632 | MS.gene81654:intron | 40.0% | |
| ! | AGAAAAGGTATGCTGATCTG+AGG | - | chr5.1:66901366-66901385 | MS.gene81654:CDS | 40.0% |
| ! | AGCCAGCTGATAATTCGTTT+TGG | - | chr5.1:66903518-66903537 | MS.gene81654:intron | 40.0% |
| ! | ATCAATTTTCTCAGTCCTGG+TGG | - | chr5.1:66903557-66903576 | MS.gene81654:intron | 40.0% |
| ! | ATCTATTCTCCCTTTGAGGA+TGG | - | chr5.1:66901915-66901934 | MS.gene81654:CDS | 40.0% |
| ! | CAGCTTTTAAACGTGAGCAA+GGG | + | chr5.1:66901673-66901692 | None:intergenic | 40.0% |
| ! | CCTTTGCCAAAGAGTATACT+CGG | + | chr5.1:66899696-66899715 | None:intergenic | 40.0% |
| ! | CTGTTGAAGTTGATCAGCTA+AGG | + | chr5.1:66903805-66903824 | None:intergenic | 40.0% |
| ! | CTTTGCCAAAGAGTATACTC+GGG | + | chr5.1:66899695-66899714 | None:intergenic | 40.0% |
| ! | GATTCTTTTACATGGAACCC+TGG | + | chr5.1:66899615-66899634 | None:intergenic | 40.0% |
| ! | TCAGCTTTTAAACGTGAGCA+AGG | + | chr5.1:66901674-66901693 | None:intergenic | 40.0% |
| ! | TGTGTTCGAGAGTCTAAAGT+TGG | - | chr5.1:66900650-66900669 | MS.gene81654:intron | 40.0% |
| ! | TGTTCTGGATATGTATGGTC+TGG | - | chr5.1:66901334-66901353 | MS.gene81654:intron | 40.0% |
| ! | TTCTTTTACATGGAACCCTG+GGG | + | chr5.1:66899613-66899632 | None:intergenic | 40.0% |
| !! | CTCCTGTATTCAAGTTTTGG+TGG | - | chr5.1:66901708-66901727 | MS.gene81654:intron | 40.0% |
| !! | CTTACAAGCCGGTTTTGTAA+GGG | - | chr5.1:66900728-66900747 | MS.gene81654:intron | 40.0% |
| !! | GAGTGAATTTTCTGGTGATG+AGG | - | chr5.1:66902478-66902497 | MS.gene81654:intron | 40.0% |
| !! | GATTTGTTGCACTGACAAAC+TGG | - | chr5.1:66902394-66902413 | MS.gene81654:intron | 40.0% |
| !! | GCTGATAATTCGTTTTGGTG+AGG | - | chr5.1:66903523-66903542 | MS.gene81654:intron | 40.0% |
| !! | TGTCTGGATTCTGGAATGTT+TGG | - | chr5.1:66904682-66904701 | MS.gene81654:intron | 40.0% |
| !!! | GTTTTGGGGTTAAGGAAATG+GGG | - | chr5.1:66904381-66904400 | MS.gene81654:intron | 40.0% |
| !!! | TTTTGGGGTTAAGGAAATGG+GGG | - | chr5.1:66904382-66904401 | MS.gene81654:intron | 40.0% |
| AAACTACCCTCCACTAAGTG+AGG | - | chr5.1:66904276-66904295 | MS.gene81654:CDS | 45.0% | |
| AAGAGCGAAATTGAGTGGGA+AGG | - | chr5.1:66900336-66900355 | MS.gene81654:intron | 45.0% | |
| AAGCTTGACCAGTAGTCTAC+AGG | + | chr5.1:66902986-66903005 | None:intergenic | 45.0% | |
| ACAGATTGATAAGCAGAGGC+AGG | + | chr5.1:66902757-66902776 | None:intergenic | 45.0% | |
| ACTTCACAAATCATGCTGGC+TGG | - | chr5.1:66900824-66900843 | MS.gene81654:intron | 45.0% | |
| AGTCTTGGACTCAAGAACCT+TGG | - | chr5.1:66904416-66904435 | MS.gene81654:intron | 45.0% | |
| ATCATTGACAGCGTCTCTTC+AGG | - | chr5.1:66899756-66899775 | MS.gene81654:intron | 45.0% | |
| ATGTCTCTGTGTCTGGATTC+TGG | - | chr5.1:66904673-66904692 | MS.gene81654:intron | 45.0% | |
| CACAAACTTACGAAGGCTCT+AGG | + | chr5.1:66904339-66904358 | None:intergenic | 45.0% | |
| CACTAAACCTCACTTAGTGG+AGG | + | chr5.1:66904286-66904305 | None:intergenic | 45.0% | |
| CACTTCCCGAGTATACTCTT+TGG | - | chr5.1:66899687-66899706 | MS.gene81654:intron | 45.0% | |
| CAGGATTAACGTCGCAAAAC+GGG | - | chr5.1:66899932-66899951 | MS.gene81654:intron | 45.0% | |
| CCGAGTATACTCTTTGGCAA+AGG | - | chr5.1:66899693-66899712 | MS.gene81654:intron | 45.0% | |
| CGCTAAGAGCGAAATTGAGT+GGG | - | chr5.1:66900332-66900351 | MS.gene81654:intron | 45.0% | |
| CTCCTCTATTTCAGCTTGTG+CGG | + | chr5.1:66902314-66902333 | None:intergenic | 45.0% | |
| GAATTCACGGAAGAAGCTTG+AGG | - | chr5.1:66904839-66904858 | MS.gene81654:intron | 45.0% | |
| GACTGGACATCTAGATAACG+GGG | + | chr5.1:66900625-66900644 | None:intergenic | 45.0% | |
| GCAGGATTAACGTCGCAAAA+CGG | - | chr5.1:66899931-66899950 | MS.gene81654:intron | 45.0% | |
| GCCTAACTTCTGCAATGTCT+AGG | - | chr5.1:66903140-66903159 | MS.gene81654:intron | 45.0% | |
| GGACTGGACATCTAGATAAC+GGG | + | chr5.1:66900626-66900645 | None:intergenic | 45.0% | |
| GGGGGCAACTAATCTTAGAT+AGG | + | chr5.1:66900605-66900624 | None:intergenic | 45.0% | |
| GTGAGCAAGGGAGAAAAAGA+GGG | + | chr5.1:66901661-66901680 | None:intergenic | 45.0% | |
| GTTATCTAGATGTCCAGTCC+TGG | - | chr5.1:66900626-66900645 | MS.gene81654:intron | 45.0% | |
| TACGGGTAACGAAAACACCA+AGG | + | chr5.1:66900974-66900993 | None:intergenic | 45.0% | |
| TCAACATTGGGTCGCTGAAT+TGG | - | chr5.1:66899723-66899742 | MS.gene81654:intron | 45.0% | |
| TCCAATGCTGATGCAGTGAA+TGG | - | chr5.1:66899282-66899301 | MS.gene81654:CDS | 45.0% | |
| TCCATTCACTGCATCAGCAT+TGG | + | chr5.1:66899286-66899305 | None:intergenic | 45.0% | |
| TCGCTAAGAGCGAAATTGAG+TGG | - | chr5.1:66900331-66900350 | MS.gene81654:intron | 45.0% | |
| TCTGGATATGTATGGTCTGG+AGG | - | chr5.1:66901337-66901356 | MS.gene81654:intron | 45.0% | |
| TGGCTGGATTATACTGCAAG+AGG | - | chr5.1:66900840-66900859 | MS.gene81654:intron | 45.0% | |
| TTCTCTAACTTCTGGCAAGC+TGG | + | chr5.1:66902170-66902189 | None:intergenic | 45.0% | |
| ! | ACTGGACATCTAGATAACGG+GGG | + | chr5.1:66900624-66900643 | None:intergenic | 45.0% |
| ! | ATTCACTGCATCAGCATTGG+AGG | + | chr5.1:66899283-66899302 | None:intergenic | 45.0% |
| ! | GATCTGAGGTTGTTCAGTAG+TGG | - | chr5.1:66901380-66901399 | MS.gene81654:CDS | 45.0% |
| ! | TTCTGGTGATGAGGAGTGAA+AGG | - | chr5.1:66902487-66902506 | MS.gene81654:intron | 45.0% |
| ! | TTTGGGGTTAAGGAAATGGG+GGG | - | chr5.1:66904383-66904402 | MS.gene81654:intron | 45.0% |
| !! | AAAGAAAGTGCTAGCGCCAA+TGG | + | chr5.1:66901871-66901890 | None:intergenic | 45.0% |
| !! | AAGCACTGGTAAGTCTACCT+TGG | - | chr5.1:66900954-66900973 | MS.gene81654:intron | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr5.1:66900730-66900749 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr5.1:66900727-66900746 | MS.gene81654:intron | 45.0% |
| !! | GGAGGAACTTGCTTTGTTTG+TGG | - | chr5.1:66901740-66901759 | MS.gene81654:intron | 45.0% |
| !! | TACAAAACCGGCTTGTAAGG+TGG | + | chr5.1:66900727-66900746 | None:intergenic | 45.0% |
| !! | TTGGTGTTTTCGTTACCCGT+AGG | - | chr5.1:66900973-66900992 | MS.gene81654:intron | 45.0% |
| !!! | AAGTTTTGGTGGATTCTGGG+TGG | - | chr5.1:66901719-66901738 | MS.gene81654:intron | 45.0% |
| !! | AAAATAAAATAAATATAAGT+AGG | + | chr5.1:66903910-66903929 | None:intergenic | 5.0% |
| !! | AAATAAAATAAATATAAGTA+GGG | + | chr5.1:66903909-66903928 | None:intergenic | 5.0% |
| AAGCTTGCGGAGAGAGCTAT+TGG | - | chr5.1:66899321-66899340 | MS.gene81654:CDS | 50.0% | |
| ACAGGTGGTGTATTCACACC+AGG | - | chr5.1:66904249-66904268 | MS.gene81654:CDS | 50.0% | |
| AGAGTTTGCCAGGTGGGAAT+TGG | - | chr5.1:66904057-66904076 | MS.gene81654:intron | 50.0% | |
| CAGGTGGTGTATTCACACCA+GGG | - | chr5.1:66904250-66904269 | MS.gene81654:CDS | 50.0% | |
| CGAACATCTGTTGCAGCAAG+TGG | - | chr5.1:66903028-66903047 | MS.gene81654:intron | 50.0% | |
| CGTGAGCAAGGGAGAAAAAG+AGG | + | chr5.1:66901662-66901681 | None:intergenic | 50.0% | |
| GGAATTGGCTGATGCTGAGA+AGG | - | chr5.1:66904072-66904091 | MS.gene81654:intron | 50.0% | |
| GGGGGGATCAGAAATAGTCT+TGG | - | chr5.1:66904401-66904420 | MS.gene81654:intron | 50.0% | |
| GTACGCTATGTCTCTGTGTC+TGG | - | chr5.1:66904666-66904685 | MS.gene81654:intron | 50.0% | |
| TAACGTCGCAAAACGGGAGA+AGG | - | chr5.1:66899938-66899957 | MS.gene81654:intron | 50.0% | |
| TCACTCACCACCTTACAAGC+CGG | - | chr5.1:66900717-66900736 | MS.gene81654:intron | 50.0% | |
| TGCCGCACAAGCTGAAATAG+AGG | - | chr5.1:66902309-66902328 | MS.gene81654:intron | 50.0% | |
| TGGAGTCTGCTGTGAATGCA+AGG | - | chr5.1:66899976-66899995 | MS.gene81654:intron | 50.0% | |
| TGTCTGTTCTGACCGTCCAA+AGG | - | chr5.1:66904977-66904996 | MS.gene81654:CDS | 50.0% | |
| TTAGACTCTCGAACACACCC+AGG | + | chr5.1:66900647-66900666 | None:intergenic | 50.0% | |
| TTCCCACCTGGCAAACTCTA+AGG | + | chr5.1:66904056-66904075 | None:intergenic | 50.0% | |
| TTGGCATGCACAACAGCAAC+AGG | + | chr5.1:66901509-66901528 | None:intergenic | 50.0% | |
| TTGGGGTTAAGGAAATGGGG+GGG | - | chr5.1:66904384-66904403 | MS.gene81654:intron | 50.0% | |
| !! | CTGGACATCTAGATAACGGG+GGG | + | chr5.1:66900623-66900642 | None:intergenic | 50.0% |
| !!! | TTTTGGTGGATTCTGGGTGG+AGG | - | chr5.1:66901722-66901741 | MS.gene81654:intron | 50.0% |
| AGCATCAGCCAATTCCCACC+TGG | + | chr5.1:66904068-66904087 | None:intergenic | 55.0% | |
| CATGCACAACAGCAACAGGC+AGG | + | chr5.1:66901505-66901524 | None:intergenic | 55.0% | |
| CGCCTTAGAGTTTGCCAGGT+GGG | - | chr5.1:66904051-66904070 | MS.gene81654:intron | 55.0% | |
| CTCGTCTCGTGAGAAGCTTG+CGG | - | chr5.1:66899308-66899327 | MS.gene81654:CDS | 55.0% | |
| GAGCTTCAAGATGCACGCGA+AGG | - | chr5.1:66899485-66899504 | MS.gene81654:intron | 55.0% | |
| GTGGAGGGTAGTTTGAACCC+TGG | + | chr5.1:66904270-66904289 | None:intergenic | 55.0% | |
| GTTGCAGCAAGTGGCTGAGA+GGG | - | chr5.1:66903037-66903056 | MS.gene81654:intron | 55.0% | |
| TAGGGGGGGCTAACTAGCAA+GGG | + | chr5.1:66903891-66903910 | None:intergenic | 55.0% | |
| TGTTGCAGCAAGTGGCTGAG+AGG | - | chr5.1:66903036-66903055 | MS.gene81654:intron | 55.0% | |
| ! | CCACCTGGCAAACTCTAAGG+CGG | + | chr5.1:66904053-66904072 | None:intergenic | 55.0% |
| !! | CAAACTCTAAGGCGGCTGTG+AGG | + | chr5.1:66904045-66904064 | None:intergenic | 55.0% |
| !! | GAAAGTGCTAGCGCCAATGG+TGG | + | chr5.1:66901868-66901887 | None:intergenic | 55.0% |
| !! | GGTGTCGGCTTACTTTCCCA+TGG | - | chr5.1:66904455-66904474 | MS.gene81654:intron | 55.0% |
| CAGCCGCCTTAGAGTTTGCC+AGG | - | chr5.1:66904047-66904066 | MS.gene81654:intron | 60.0% | |
| CCGCCTTAGAGTTTGCCAGG+TGG | - | chr5.1:66904050-66904069 | MS.gene81654:intron | 60.0% | |
| CTCTCGAACACACCCAGGAC+TGG | + | chr5.1:66900642-66900661 | None:intergenic | 60.0% | |
| GTAGGGGGGGCTAACTAGCA+AGG | + | chr5.1:66903892-66903911 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 66899249 | 66905001 | 66899249 | ID=MS.gene81654 |
| chr5.1 | mRNA | 66899249 | 66905001 | 66899249 | ID=MS.gene81654.t1;Parent=MS.gene81654 |
| chr5.1 | exon | 66904870 | 66905001 | 66904870 | ID=MS.gene81654.t1.exon1;Parent=MS.gene81654.t1 |
| chr5.1 | CDS | 66904870 | 66905001 | 66904870 | ID=cds.MS.gene81654.t1;Parent=MS.gene81654.t1 |
| chr5.1 | exon | 66904706 | 66904789 | 66904706 | ID=MS.gene81654.t1.exon2;Parent=MS.gene81654.t1 |
| chr5.1 | CDS | 66904706 | 66904789 | 66904706 | ID=cds.MS.gene81654.t1;Parent=MS.gene81654.t1 |
| chr5.1 | exon | 66904473 | 66904592 | 66904473 | ID=MS.gene81654.t1.exon3;Parent=MS.gene81654.t1 |
| chr5.1 | CDS | 66904473 | 66904592 | 66904473 | ID=cds.MS.gene81654.t1;Parent=MS.gene81654.t1 |
| chr5.1 | exon | 66904137 | 66904323 | 66904137 | ID=MS.gene81654.t1.exon4;Parent=MS.gene81654.t1 |
| chr5.1 | CDS | 66904137 | 66904323 | 66904137 | ID=cds.MS.gene81654.t1;Parent=MS.gene81654.t1 |
| chr5.1 | exon | 66903893 | 66904053 | 66903893 | ID=MS.gene81654.t1.exon5;Parent=MS.gene81654.t1 |
| chr5.1 | CDS | 66903893 | 66904053 | 66903893 | ID=cds.MS.gene81654.t1;Parent=MS.gene81654.t1 |
| chr5.1 | exon | 66903289 | 66903360 | 66903289 | ID=MS.gene81654.t1.exon6;Parent=MS.gene81654.t1 |
| chr5.1 | CDS | 66903289 | 66903360 | 66903289 | ID=cds.MS.gene81654.t1;Parent=MS.gene81654.t1 |
| chr5.1 | exon | 66902878 | 66902954 | 66902878 | ID=MS.gene81654.t1.exon7;Parent=MS.gene81654.t1 |
| chr5.1 | CDS | 66902878 | 66902954 | 66902878 | ID=cds.MS.gene81654.t1;Parent=MS.gene81654.t1 |
| chr5.1 | exon | 66901888 | 66902079 | 66901888 | ID=MS.gene81654.t1.exon8;Parent=MS.gene81654.t1 |
| chr5.1 | CDS | 66901888 | 66902079 | 66901888 | ID=cds.MS.gene81654.t1;Parent=MS.gene81654.t1 |
| chr5.1 | exon | 66901359 | 66901431 | 66901359 | ID=MS.gene81654.t1.exon9;Parent=MS.gene81654.t1 |
| chr5.1 | CDS | 66901359 | 66901431 | 66901359 | ID=cds.MS.gene81654.t1;Parent=MS.gene81654.t1 |
| chr5.1 | exon | 66901174 | 66901260 | 66901174 | ID=MS.gene81654.t1.exon10;Parent=MS.gene81654.t1 |
| chr5.1 | CDS | 66901174 | 66901260 | 66901174 | ID=cds.MS.gene81654.t1;Parent=MS.gene81654.t1 |
| chr5.1 | exon | 66900372 | 66900452 | 66900372 | ID=MS.gene81654.t1.exon11;Parent=MS.gene81654.t1 |
| chr5.1 | CDS | 66900372 | 66900452 | 66900372 | ID=cds.MS.gene81654.t1;Parent=MS.gene81654.t1 |
| chr5.1 | exon | 66900056 | 66900258 | 66900056 | ID=MS.gene81654.t1.exon12;Parent=MS.gene81654.t1 |
| chr5.1 | CDS | 66900056 | 66900258 | 66900056 | ID=cds.MS.gene81654.t1;Parent=MS.gene81654.t1 |
| chr5.1 | exon | 66899249 | 66899411 | 66899249 | ID=MS.gene81654.t1.exon13;Parent=MS.gene81654.t1 |
| chr5.1 | CDS | 66899249 | 66899411 | 66899249 | ID=cds.MS.gene81654.t1;Parent=MS.gene81654.t1 |
| Gene Sequence |
| Protein sequence |
