Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82833.t1 | XP_013450766.1 | 82.4 | 567 | 91 | 4 | 1 | 560 | 1 | 565 | 2.30E-143 | 519.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82833.t1 | A0A072U4W9 | 82.4 | 567 | 91 | 4 | 1 | 560 | 1 | 565 | 1.7e-143 | 519.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050330 | MS.gene82833 | 0.815401 | 9.42E-52 | -1.69E-46 |
| MS.gene053054 | MS.gene82833 | 0.89033 | 1.09E-73 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82833.t1 | MTR_6g004930 | 95.782 | 569 | 11 | 6 | 1 | 560 | 1 | 565 | 0.0 | 1062 |
| MS.gene82833.t1 | MTR_6g004940 | 65.063 | 395 | 75 | 7 | 160 | 530 | 1 | 356 | 1.48e-135 | 399 |
| MS.gene82833.t1 | MTR_0004s0130 | 29.885 | 174 | 93 | 4 | 55 | 215 | 12 | 169 | 7.80e-19 | 90.1 |
| MS.gene82833.t1 | MTR_2g090360 | 31.579 | 171 | 105 | 3 | 48 | 215 | 6 | 167 | 1.27e-16 | 83.2 |
| MS.gene82833.t1 | MTR_2g090360 | 31.544 | 149 | 96 | 3 | 67 | 215 | 5 | 147 | 4.26e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82833.t1 | AT3G01560 | 43.357 | 572 | 225 | 20 | 1 | 546 | 1 | 499 | 9.88e-91 | 288 |
| MS.gene82833.t1 | AT3G01560 | 44.651 | 430 | 167 | 14 | 124 | 546 | 5 | 370 | 3.02e-68 | 225 |
| MS.gene82833.t1 | AT5G14540 | 41.692 | 331 | 126 | 11 | 1 | 303 | 7 | 298 | 2.64e-56 | 198 |
| MS.gene82833.t1 | AT4G28300 | 31.325 | 166 | 103 | 3 | 54 | 213 | 14 | 174 | 1.29e-15 | 80.1 |
| MS.gene82833.t1 | AT4G28300 | 37.778 | 90 | 56 | 0 | 124 | 213 | 27 | 116 | 6.07e-15 | 77.8 |
Find 182 sgRNAs with CRISPR-Local
Find 422 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAATACGACGTCGTTTA+TGG | 0.118460 | 6.1:+996970 | None:intergenic |
| TCTGGATATGGTACATTATC+TGG | 0.152917 | 6.1:+1002465 | MS.gene82833:CDS |
| GGAGGTTGAGGAGGTGCATT+AGG | 0.241389 | 6.1:-1001976 | None:intergenic |
| GCTTATCCAGCACTGTATTT+AGG | 0.248589 | 6.1:-1002785 | None:intergenic |
| GGCAGTTGGTATTGCTGATT+TGG | 0.254348 | 6.1:-1002117 | None:intergenic |
| GTTCTCCTGGAGCTGGTAAC+AGG | 0.264309 | 6.1:+1002658 | MS.gene82833:CDS |
| TTGCAGTTGAGGTGGATTTC+CGG | 0.277046 | 6.1:-1002262 | None:intergenic |
| TGAACAGGTGGTGGCAAGTA+TGG | 0.300203 | 6.1:-1002081 | None:intergenic |
| AGTGAGAATTACTTTGGAAT+TGG | 0.300882 | 6.1:-997242 | None:intergenic |
| CAACCTTCCCAACAGTTCTA+TGG | 0.307696 | 6.1:+1002387 | MS.gene82833:CDS |
| TGTGCAGAACTATGGTTCTT+TGG | 0.308399 | 6.1:+1000081 | MS.gene82833:intron |
| GAAGATATTGTTGAGTTTGC+AGG | 0.333603 | 6.1:-1001909 | None:intergenic |
| GGGATCTGAGAGTATTGATT+TGG | 0.338854 | 6.1:-1002033 | None:intergenic |
| AGATGGTGGCTGGCGGAGAT+TGG | 0.345438 | 6.1:-1002343 | None:intergenic |
| GGATGTGGCTGCTGAGTTAA+AGG | 0.364654 | 6.1:-1002138 | None:intergenic |
| CAACATATACAGGTGCAAAC+AGG | 0.369517 | 6.1:+1001730 | MS.gene82833:intron |
| GGAAGGTTGAGGAGGTCCGC+TGG | 0.372446 | 6.1:-1002373 | None:intergenic |
| TCTGAGGAACAGTTGGGGTT+GGG | 0.372597 | 6.1:-1002053 | None:intergenic |
| GGTGAGTTCTGGTTTCTACT+TGG | 0.372649 | 6.1:-1000246 | None:intergenic |
| AGTCGACAAAGTTGCCACTA+TGG | 0.375561 | 6.1:+1002698 | MS.gene82833:CDS |
| GTTTATGGACAAACAGATAA+TGG | 0.379393 | 6.1:+996985 | MS.gene82833:CDS |
| TATTGATTTGGAAGTTGAGC+TGG | 0.379878 | 6.1:-1002021 | None:intergenic |
| TCACCATCTTGAGAGTTCTA+TGG | 0.380351 | 6.1:+1000264 | MS.gene82833:CDS |
| GCGAGTTACTCTTCTGGATA+TGG | 0.385894 | 6.1:+1002453 | MS.gene82833:CDS |
| GAGGTTGAGGAGGTGCATTA+GGG | 0.392897 | 6.1:-1001975 | None:intergenic |
| GTTCACGATTCTTCTTGTTA+AGG | 0.399167 | 6.1:-997057 | None:intergenic |
| GTCGATGAAATCGTTGTTGT+TGG | 0.399316 | 6.1:-997035 | None:intergenic |
| CCTACTGAGCCATATCGATA+TGG | 0.413358 | 6.1:+1002489 | MS.gene82833:CDS |
| CCTGGTGCGAGTTACTCTTC+TGG | 0.414200 | 6.1:+1002447 | MS.gene82833:CDS |
| CATAAGGTGGTTCCTCTAGA+TGG | 0.414395 | 6.1:-1002299 | None:intergenic |
| ACTCTCAAGATGGTGAGTTC+TGG | 0.417745 | 6.1:-1000257 | None:intergenic |
| TCTGCAGTAAGTGGTGGTTC+AGG | 0.419285 | 6.1:+1002636 | MS.gene82833:CDS |
| GATGGTGGCTGGCGGAGATT+GGG | 0.419902 | 6.1:-1002342 | None:intergenic |
| TATGGTGGACCACCTCAATA+TGG | 0.422388 | 6.1:+1002507 | MS.gene82833:CDS |
| GGTCCGCTGGGTGGCTGAGA+TGG | 0.426894 | 6.1:-1002360 | None:intergenic |
| TGTGGGAGTACGCGGGCAGT+AGG | 0.431246 | 6.1:-1002597 | None:intergenic |
| GAGTTCTATGGATGATTTGA+AGG | 0.438756 | 6.1:+1000276 | MS.gene82833:CDS |
| CTCTGAGGAACAGTTGGGGT+TGG | 0.439164 | 6.1:-1002054 | None:intergenic |
| TGGGTGGCTGAGATGGTGGC+TGG | 0.440005 | 6.1:-1002353 | None:intergenic |
| GGAATTTCCTGAGATTGAAC+AGG | 0.441932 | 6.1:-1002096 | None:intergenic |
| AATTTGCATCATGTTCTAGA+AGG | 0.442921 | 6.1:+1000205 | MS.gene82833:CDS |
| GGTGGTCCACCATATCGATA+TGG | 0.447026 | 6.1:-1002498 | None:intergenic |
| GTGAGTTCTGGTTTCTACTT+GGG | 0.461793 | 6.1:-1000245 | None:intergenic |
| TGGGTAACCGTTTCCACCAC+TGG | 0.462468 | 6.1:-1002568 | None:intergenic |
| GATCTCTCTGAGGAACAGTT+GGG | 0.462714 | 6.1:-1002059 | None:intergenic |
| GGTGCCCCTGGTTGAGGATG+TGG | 0.464633 | 6.1:-1002153 | None:intergenic |
| CTGGAAGCCGCCGAAGCGTT+AGG | 0.465415 | 6.1:-1002549 | None:intergenic |
| CTGGATATGGTACATTATCT+GGG | 0.467302 | 6.1:+1002466 | MS.gene82833:CDS |
| ACCTCAACTGCAATCTTCCA+TGG | 0.469026 | 6.1:+1002272 | MS.gene82833:CDS |
| ACAGATGAAGTTTGCTGCAC+AGG | 0.469179 | 6.1:-1001871 | None:intergenic |
| TTGTCGACTATATCATCAAC+AGG | 0.475344 | 6.1:-1002684 | None:intergenic |
| TGCGGAGGTGCCCCTGGTTG+AGG | 0.476318 | 6.1:-1002159 | None:intergenic |
| AGGTTGAGGAGGTGCATTAG+GGG | 0.476796 | 6.1:-1001974 | None:intergenic |
| TCGAACAATGAAGAAACATA+TGG | 0.477114 | 6.1:+1000180 | MS.gene82833:CDS |
| AAGATATTGTTGAGTTTGCA+GGG | 0.482811 | 6.1:-1001908 | None:intergenic |
| CAGCAACAGAGAGGTTGGTT+TGG | 0.486990 | 6.1:+1002834 | MS.gene82833:CDS |
| GGATCTCTCTGAGGAACAGT+TGG | 0.488207 | 6.1:-1002060 | None:intergenic |
| GTCACAACTACCTAACGCTT+CGG | 0.489064 | 6.1:+1002539 | MS.gene82833:CDS |
| GTATCTGTTGGAAATAATCA+TGG | 0.490366 | 6.1:+1000298 | MS.gene82833:CDS |
| GGTTCAGGTTCTCCTGGAGC+TGG | 0.491108 | 6.1:+1002651 | MS.gene82833:CDS |
| GTTTCCCTCACATGATCTCT+AGG | 0.493026 | 6.1:-1002726 | None:intergenic |
| AACGATGAAGAAGAATGATC+AGG | 0.494414 | 6.1:-997196 | None:intergenic |
| GCCACCACCTGTTCAATCTC+AGG | 0.494644 | 6.1:+1002089 | MS.gene82833:CDS |
| AGTGGTGGTTCAGGTTCTCC+TGG | 0.495836 | 6.1:+1002645 | MS.gene82833:CDS |
| ATGCAGTAGGTATTGCTTGT+GGG | 0.496173 | 6.1:-1002614 | None:intergenic |
| TCCTGAGATTGAACAGGTGG+TGG | 0.500615 | 6.1:-1002090 | None:intergenic |
| TGTTGATGCGGAGGTGCCCC+TGG | 0.501541 | 6.1:-1002165 | None:intergenic |
| TAAGTCTGAGAAGGAACATA+AGG | 0.503459 | 6.1:-1002315 | None:intergenic |
| AATGCAAGCTCAGCTACAAC+TGG | 0.504070 | 6.1:+1001783 | MS.gene82833:CDS |
| GGTTGAGGAGGTGCATTAGG+GGG | 0.504519 | 6.1:-1001973 | None:intergenic |
| CAACAGCCACCGCATTCATC+CGG | 0.505529 | 6.1:+1002243 | MS.gene82833:CDS |
| AATAATCATGGAATCACTGA+TGG | 0.511625 | 6.1:+1000310 | MS.gene82833:CDS |
| GATGAATGCGGTGGCTGTTG+TGG | 0.514588 | 6.1:-1002240 | None:intergenic |
| GAAGGTTGAGGAGGTCCGCT+GGG | 0.515293 | 6.1:-1002372 | None:intergenic |
| AACGCTTCGGCGGCTTCCAG+TGG | 0.517765 | 6.1:+1002552 | MS.gene82833:CDS |
| GCGGCTTCCAGTGGTGGAAA+CGG | 0.518066 | 6.1:+1002561 | MS.gene82833:CDS |
| ATCATGTGAGGGAAACGGTT+CGG | 0.519055 | 6.1:+1002733 | MS.gene82833:CDS |
| GTGGGAGTACGCGGGCAGTA+GGG | 0.525756 | 6.1:-1002596 | None:intergenic |
| CCATATCGATATGGCTCAGT+AGG | 0.525963 | 6.1:-1002489 | None:intergenic |
| TTGAAGCATCAACAGCGCTC+TGG | 0.526502 | 6.1:-1000141 | None:intergenic |
| GTCGACAAAGTTGCCACTAT+GGG | 0.527260 | 6.1:+1002699 | MS.gene82833:CDS |
| CAGCAGCCACATCCTCAACC+AGG | 0.527408 | 6.1:+1002147 | MS.gene82833:CDS |
| CACAGGATCTGATGTGGCAC+GGG | 0.529555 | 6.1:-1001854 | None:intergenic |
| CCGCTGGGTGGCTGAGATGG+TGG | 0.532280 | 6.1:-1002357 | None:intergenic |
| CGGTGTTCCATAGAACTGTT+GGG | 0.532437 | 6.1:-1002394 | None:intergenic |
| GCTTCGGCGGCTTCCAGTGG+TGG | 0.534650 | 6.1:+1002555 | MS.gene82833:CDS |
| AACAGGGGTGCATGATATCA+AGG | 0.535028 | 6.1:+1001747 | MS.gene82833:CDS |
| TGATGGGAAATTGAGGCTGT+TGG | 0.535199 | 6.1:+1000327 | MS.gene82833:CDS |
| GTTGGAGAATATTCTTTCTG+AGG | 0.538216 | 6.1:+1000345 | MS.gene82833:CDS |
| GTTCGGAAGCTGACAGAGAA+TGG | 0.539452 | 6.1:+1002750 | MS.gene82833:CDS |
| ATATGCAGCAACAGAGAGGT+TGG | 0.542821 | 6.1:+1002829 | MS.gene82833:CDS |
| ATGATCAGGAAGTGAACGAA+TGG | 0.543991 | 6.1:-997182 | None:intergenic |
| CCCATGGAAGATTGCAGTTG+AGG | 0.546082 | 6.1:-1002273 | None:intergenic |
| GAAACCACGGGGATTGATTG+TGG | 0.547752 | 6.1:-1001949 | None:intergenic |
| GAGGTGGTAAACTTTGTTGA+GGG | 0.548587 | 6.1:-1001999 | None:intergenic |
| GATGATTTGAAGGTATCTGT+TGG | 0.550649 | 6.1:+1000286 | MS.gene82833:CDS |
| TTCTCCTGGAGCTGGTAACA+GGG | 0.552561 | 6.1:+1002659 | MS.gene82833:CDS |
| GGCTGTTGTGGAGGTAGATG+AGG | 0.553096 | 6.1:-1002228 | None:intergenic |
| AACAGAGAGGTTGGTTTGGT+AGG | 0.553859 | 6.1:+1002838 | MS.gene82833:CDS |
| AACATATACAGGTGCAAACA+GGG | 0.554029 | 6.1:+1001731 | MS.gene82833:intron |
| ATGGAAGATTGCAGTTGAGG+TGG | 0.554693 | 6.1:-1002270 | None:intergenic |
| GGAACCCTGTTACCAGCTCC+AGG | 0.557039 | 6.1:-1002663 | None:intergenic |
| GACTGTTTACTACCATATTG+AGG | 0.557194 | 6.1:-1002519 | None:intergenic |
| CGCGGGCAGTAGGGAGCTGT+GGG | 0.561381 | 6.1:-1002587 | None:intergenic |
| TAGAGATCATGTGAGGGAAA+CGG | 0.562181 | 6.1:+1002728 | MS.gene82833:CDS |
| GTGGCTGAGATGGTGGCTGG+CGG | 0.563635 | 6.1:-1002350 | None:intergenic |
| CCTACTGCATCTGCAGTAAG+TGG | 0.565690 | 6.1:+1002627 | MS.gene82833:CDS |
| TTGGGAGGATAAGTCTGAGA+AGG | 0.566348 | 6.1:-1002324 | None:intergenic |
| GCGGTGTTCCATAGAACTGT+TGG | 0.568740 | 6.1:-1002395 | None:intergenic |
| ACGCGGGCAGTAGGGAGCTG+TGG | 0.569642 | 6.1:-1002588 | None:intergenic |
| GGTGGCTGGCGGAGATTGGG+AGG | 0.569643 | 6.1:-1002339 | None:intergenic |
| GGTGGTAAACTTTGTTGAGG+GGG | 0.570383 | 6.1:-1001997 | None:intergenic |
| TTTGGAAGTTGAGCTGGAGG+TGG | 0.578193 | 6.1:-1002015 | None:intergenic |
| GCACAGGATCTGATGTGGCA+CGG | 0.579401 | 6.1:-1001855 | None:intergenic |
| GTATTGCTTGTGGGAGTACG+CGG | 0.579602 | 6.1:-1002605 | None:intergenic |
| TAGAACTGTTGGGAAGGTTG+AGG | 0.579906 | 6.1:-1002384 | None:intergenic |
| GGAGGTGGTAAACTTTGTTG+AGG | 0.582396 | 6.1:-1002000 | None:intergenic |
| ATGGGTTGAAAATCGTAGCT+AGG | 0.582541 | 6.1:-997163 | None:intergenic |
| CAGATAATGGATCTAAGCCA+TGG | 0.583832 | 6.1:+996998 | MS.gene82833:CDS |
| CCTCAACTGCAATCTTCCAT+GGG | 0.585108 | 6.1:+1002273 | MS.gene82833:CDS |
| CCAGAAGAGTAACTCGCACC+AGG | 0.585361 | 6.1:-1002447 | None:intergenic |
| CTGGATAAGCTTATGAATGA+AGG | 0.585757 | 6.1:+1002798 | MS.gene82833:CDS |
| AGCAGCCACATCCTCAACCA+GGG | 0.586197 | 6.1:+1002148 | MS.gene82833:CDS |
| ATCTCTAGGGAATCCCATAG+TGG | 0.587762 | 6.1:-1002712 | None:intergenic |
| AGTTGACCTAAATACAGTGC+TGG | 0.587959 | 6.1:+1002779 | MS.gene82833:CDS |
| TGATTTGGAAGTTGAGCTGG+AGG | 0.590060 | 6.1:-1002018 | None:intergenic |
| TGATCAGGAAGTGAACGAAT+GGG | 0.594320 | 6.1:-997181 | None:intergenic |
| CATCCATAGAACTCTCAAGA+TGG | 0.597918 | 6.1:-1000267 | None:intergenic |
| AACTGTTGGGAAGGTTGAGG+AGG | 0.598242 | 6.1:-1002381 | None:intergenic |
| ATAATCATGGAATCACTGAT+GGG | 0.603214 | 6.1:+1000311 | MS.gene82833:CDS |
| GGCTGAGAGTATTGATGATG+AGG | 0.603851 | 6.1:-1002201 | None:intergenic |
| GGTTGAGGAGGTCCGCTGGG+TGG | 0.604968 | 6.1:-1002369 | None:intergenic |
| TGTGGAAGATTATAAGACGA+AGG | 0.605650 | 6.1:-1001931 | None:intergenic |
| TGCTGATATTGTTGATGCGG+AGG | 0.607900 | 6.1:-1002174 | None:intergenic |
| TTCCTCTAGATGGTGACCCA+TGG | 0.609804 | 6.1:-1002289 | None:intergenic |
| GATGCAGTAGGTATTGCTTG+TGG | 0.612043 | 6.1:-1002615 | None:intergenic |
| TTCTAGAAGGTGTTAGTGCG+CGG | 0.613505 | 6.1:+1000218 | MS.gene82833:CDS |
| TTTCCCTCACATGATCTCTA+GGG | 0.616191 | 6.1:-1002725 | None:intergenic |
| TTCCATGGGTCACCATCTAG+AGG | 0.616790 | 6.1:+1002287 | MS.gene82833:CDS |
| CCACTTACTGCAGATGCAGT+AGG | 0.618868 | 6.1:-1002627 | None:intergenic |
| GTCTGCTGATATTGTTGATG+CGG | 0.620702 | 6.1:-1002177 | None:intergenic |
| TTCTATGGAACACCGCCACA+AGG | 0.620721 | 6.1:+1002402 | MS.gene82833:CDS |
| AAGCTTATGAATGAAGGTGG+TGG | 0.622241 | 6.1:+1002804 | MS.gene82833:CDS |
| GAACCACCATCGAGTAGACC+TGG | 0.628427 | 6.1:+1002429 | MS.gene82833:CDS |
| GAATCACTGATGGGAAATTG+AGG | 0.629747 | 6.1:+1000320 | MS.gene82833:CDS |
| GAATGCGGTGGCTGTTGTGG+AGG | 0.630061 | 6.1:-1002237 | None:intergenic |
| GCTGCTGAGTTAAAGGCAGT+TGG | 0.630771 | 6.1:-1002131 | None:intergenic |
| GTTCCATAGAACTGTTGGGA+AGG | 0.631446 | 6.1:-1002390 | None:intergenic |
| GCTGAGAGTATTGATGATGA+GGG | 0.632355 | 6.1:-1002200 | None:intergenic |
| ACTGAGCCATATCGATATGG+TGG | 0.635210 | 6.1:+1002492 | MS.gene82833:CDS |
| GTCTGAGAAGGAACATAAGG+TGG | 0.637200 | 6.1:-1002312 | None:intergenic |
| ATCTCTCTGAGGAACAGTTG+GGG | 0.642126 | 6.1:-1002058 | None:intergenic |
| CTCGCACCAGGTCTACTCGA+TGG | 0.643974 | 6.1:-1002435 | None:intergenic |
| TGGAAGATGATGATCCTCCA+TGG | 0.644949 | 6.1:-997015 | None:intergenic |
| GTAGCTAGGAACAATATCAT+CGG | 0.645739 | 6.1:-997149 | None:intergenic |
| GCAGCCACATCCTCAACCAG+GGG | 0.647975 | 6.1:+1002149 | MS.gene82833:CDS |
| TGTGGAGGTAGATGAGGCGG+TGG | 0.648997 | 6.1:-1002222 | None:intergenic |
| GAATTGGAATCAGAATTCCA+AGG | 0.657124 | 6.1:-997226 | None:intergenic |
| ACTGCATCTGCAGTAAGTGG+TGG | 0.658963 | 6.1:+1002630 | MS.gene82833:CDS |
| TGTTGTGGAGGTAGATGAGG+CGG | 0.661173 | 6.1:-1002225 | None:intergenic |
| AGATATTGTTGAGTTTGCAG+GGG | 0.662805 | 6.1:-1001907 | None:intergenic |
| ATTTCCTGAGATTGAACAGG+TGG | 0.665381 | 6.1:-1002093 | None:intergenic |
| AGGTGGTAAACTTTGTTGAG+GGG | 0.665630 | 6.1:-1001998 | None:intergenic |
| GATGGTGGTTCATATCCTTG+TGG | 0.666986 | 6.1:-1002417 | None:intergenic |
| TATTGCTTGTGGGAGTACGC+GGG | 0.670170 | 6.1:-1002604 | None:intergenic |
| GATTCCCTAGAGATCATGTG+AGG | 0.674405 | 6.1:+1002721 | MS.gene82833:CDS |
| TGTTTACTACCATATTGAGG+TGG | 0.680049 | 6.1:-1002516 | None:intergenic |
| GCACCAGGTCTACTCGATGG+TGG | 0.681299 | 6.1:-1002432 | None:intergenic |
| CCACCATCTCAGCCACCCAG+CGG | 0.689523 | 6.1:+1002357 | MS.gene82833:CDS |
| ATTCCCTAGAGATCATGTGA+GGG | 0.691841 | 6.1:+1002722 | MS.gene82833:CDS |
| GGTGGATTTCCGGATGAATG+CGG | 0.691921 | 6.1:-1002252 | None:intergenic |
| GATAAGCTTATGAATGAAGG+TGG | 0.692443 | 6.1:+1002801 | MS.gene82833:CDS |
| ACAACTACCTAACGCTTCGG+CGG | 0.699351 | 6.1:+1002542 | MS.gene82833:CDS |
| GGCAAGTATGGATCTCTCTG+AGG | 0.701957 | 6.1:-1002069 | None:intergenic |
| GGATTTCCGGATGAATGCGG+TGG | 0.703500 | 6.1:-1002249 | None:intergenic |
| GGTGGTTCATATCCTTGTGG+CGG | 0.711124 | 6.1:-1002414 | None:intergenic |
| TTGCTGCACAGGATCTGATG+TGG | 0.720740 | 6.1:-1001860 | None:intergenic |
| CTGAGAGTATTGATGATGAG+GGG | 0.722939 | 6.1:-1002199 | None:intergenic |
| TCTTCCACAATCAATCCCCG+TGG | 0.724568 | 6.1:+1001945 | MS.gene82833:CDS |
| ACATATACAGGTGCAAACAG+GGG | 0.731424 | 6.1:+1001732 | MS.gene82833:intron |
| GGTGATATGCAGCAACAGAG+AGG | 0.768274 | 6.1:+1002825 | MS.gene82833:CDS |
| ATAATGGATCTAAGCCATGG+AGG | 0.784217 | 6.1:+997001 | MS.gene82833:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTATAATCGAAATTA+GGG | - | chr6.1:997276-997295 | None:intergenic | 10.0% |
| !! | ATAATTTATAAATCATAATG+AGG | + | chr6.1:998131-998150 | MS.gene82833:intron | 10.0% |
| !! | CTTATAAATTTATATACTTA+GGG | - | chr6.1:997958-997977 | None:intergenic | 10.0% |
| !! | TAATAATTATAATCGAAATT+AGG | - | chr6.1:997277-997296 | None:intergenic | 10.0% |
| !! | TCTTATAAATTTATATACTT+AGG | - | chr6.1:997959-997978 | None:intergenic | 10.0% |
| !! | TGTATATATAATTATATAGT+TGG | + | chr6.1:1000900-1000919 | MS.gene82833:intron | 10.0% |
| !!! | TATTTTAAATTTCTTTAATG+GGG | + | chr6.1:1001275-1001294 | MS.gene82833:intron | 10.0% |
| !! | AACTTTGCATAATATTAAAA+AGG | - | chr6.1:999720-999739 | None:intergenic | 15.0% |
| !! | TTATCTTAGTTATTTGTTTA+TGG | + | chr6.1:999846-999865 | MS.gene82833:intron | 15.0% |
| !! | TTATTCATATACTTAACTTA+AGG | + | chr6.1:999002-999021 | MS.gene82833:intron | 15.0% |
| !!! | TAGTTTAACCTTAAAATTTT+CGG | + | chr6.1:1000548-1000567 | MS.gene82833:intron | 15.0% |
| !!! | TTTTGAGAAAGATTATTTTT+TGG | - | chr6.1:999325-999344 | None:intergenic | 15.0% |
| !! | AAAACAAATTATTTGGATGA+TGG | + | chr6.1:1001524-1001543 | MS.gene82833:intron | 20.0% |
| !! | AAACAAATTATTTGGATGAT+GGG | + | chr6.1:1001525-1001544 | MS.gene82833:intron | 20.0% |
| !! | ACAAAGGAAAACAAATTATT+TGG | + | chr6.1:1001517-1001536 | MS.gene82833:intron | 20.0% |
| !! | AGTATATGAATAATTATGAG+TGG | - | chr6.1:998995-999014 | None:intergenic | 20.0% |
| !! | TATTATGTTTGTCATTAGTT+GGG | + | chr6.1:1000773-1000792 | MS.gene82833:intron | 20.0% |
| !! | TATTATTTATAAGCTCGTTA+AGG | + | chr6.1:997657-997676 | MS.gene82833:intron | 20.0% |
| !! | TGAACTAAAATTAAAGCTTT+AGG | + | chr6.1:1000626-1000645 | MS.gene82833:intron | 20.0% |
| !! | TTATTATGTTTGTCATTAGT+TGG | + | chr6.1:1000772-1000791 | MS.gene82833:intron | 20.0% |
| !! | TTGAAATTGATTGTATAAAG+TGG | + | chr6.1:998375-998394 | MS.gene82833:intron | 20.0% |
| !! | TTTATAAATCATAATGAGGT+TGG | + | chr6.1:998135-998154 | MS.gene82833:intron | 20.0% |
| !! | TTTGTGTGATTGATTAATTA+TGG | + | chr6.1:997338-997357 | MS.gene82833:intron | 20.0% |
| !!! | AAATTAAAGCTTTAGGTATT+AGG | + | chr6.1:1000633-1000652 | MS.gene82833:intron | 20.0% |
| !!! | ATGAATTTTTTAAGTTACCA+AGG | - | chr6.1:999628-999647 | None:intergenic | 20.0% |
| !!! | ATGTGTTTGTTGTATTTAAA+AGG | + | chr6.1:998719-998738 | MS.gene82833:intron | 20.0% |
| !!! | ATTATTGTTTTCATCATGAA+AGG | + | chr6.1:1001202-1001221 | MS.gene82833:intron | 20.0% |
| !!! | ATTTAATGCTTCTGAAAATA+TGG | + | chr6.1:998750-998769 | MS.gene82833:intron | 20.0% |
| !!! | ATTTTAGTTCATTTTTAGCA+TGG | - | chr6.1:1000617-1000636 | None:intergenic | 20.0% |
| !!! | CTTTTTGTTGATTCAAATAT+TGG | + | chr6.1:1000445-1000464 | MS.gene82833:intron | 20.0% |
| !!! | TAATTTGAAGTTTATAGCTT+AGG | + | chr6.1:997484-997503 | MS.gene82833:intron | 20.0% |
| !!! | TATTGAAAATTTTGTGAATG+TGG | + | chr6.1:1001158-1001177 | MS.gene82833:intron | 20.0% |
| !!! | TTTAATGCTTCTGAAAATAT+GGG | + | chr6.1:998751-998770 | MS.gene82833:intron | 20.0% |
| ! | AACCTAAGAAAAAGTAACAA+AGG | + | chr6.1:1001392-1001411 | MS.gene82833:intron | 25.0% |
| ! | AATCTATACAACAATGGTTA+AGG | + | chr6.1:999468-999487 | MS.gene82833:intron | 25.0% |
| ! | ATACTACTATACTAGATTAG+TGG | + | chr6.1:1000692-1000711 | MS.gene82833:intron | 25.0% |
| ! | ATGTCAAACAAAAGAGTAAA+AGG | - | chr6.1:1001709-1001728 | None:intergenic | 25.0% |
| ! | ATTATGTTTGTCATTAGTTG+GGG | + | chr6.1:1000774-1000793 | MS.gene82833:intron | 25.0% |
| ! | CAACTTCTAACATTAATTTC+TGG | + | chr6.1:1000396-1000415 | MS.gene82833:intron | 25.0% |
| ! | CCATTAATTGAGTAGTTTAA+AGG | + | chr6.1:998270-998289 | MS.gene82833:intron | 25.0% |
| ! | CCTTTAAACTACTCAATTAA+TGG | - | chr6.1:998273-998292 | None:intergenic | 25.0% |
| ! | CTTTCAATGATACAAAGTAA+AGG | + | chr6.1:999117-999136 | MS.gene82833:intron | 25.0% |
| ! | GAAATTAATGTTAGAAGTTG+AGG | - | chr6.1:1000396-1000415 | None:intergenic | 25.0% |
| ! | TAAAGTAGTGAGAATTACTT+TGG | - | chr6.1:997251-997270 | None:intergenic | 25.0% |
| ! | TCGTTAATTCATCACAAAAA+TGG | + | chr6.1:997112-997131 | MS.gene82833:CDS | 25.0% |
| ! | TGAAAACAATAATGTAAGAG+TGG | - | chr6.1:1001195-1001214 | None:intergenic | 25.0% |
| ! | TGAGATTATCTACTAAGTAT+GGG | - | chr6.1:997915-997934 | None:intergenic | 25.0% |
| ! | TTAATTCATCACAAAAATGG+CGG | + | chr6.1:997115-997134 | MS.gene82833:CDS | 25.0% |
| ! | TTGAATAAGTGCATAGTAAA+AGG | + | chr6.1:999738-999757 | MS.gene82833:intron | 25.0% |
| ! | TTGAGATTATCTACTAAGTA+TGG | - | chr6.1:997916-997935 | None:intergenic | 25.0% |
| !! | AATTACAACATTTTGTACCT+TGG | + | chr6.1:999608-999627 | MS.gene82833:intron | 25.0% |
| !! | ACTTTGATGTTGTCATTTAT+AGG | - | chr6.1:998933-998952 | None:intergenic | 25.0% |
| !! | ATTGCAAACCGAAAATTTTA+AGG | - | chr6.1:1000559-1000578 | None:intergenic | 25.0% |
| !! | TTGTCAAATAGTTGATATAG+TGG | + | chr6.1:998440-998459 | MS.gene82833:intron | 25.0% |
| !! | TTTGTCTTGTTGTGAAAATT+AGG | + | chr6.1:997369-997388 | MS.gene82833:intron | 25.0% |
| !!! | AAAATTTTCGGTTTGCAATT+TGG | + | chr6.1:1000560-1000579 | MS.gene82833:intron | 25.0% |
| !!! | AAATTTTCGGTTTGCAATTT+GGG | + | chr6.1:1000561-1000580 | MS.gene82833:intron | 25.0% |
| !!! | AATGAAAAGTGTCTGTTAAA+AGG | + | chr6.1:998811-998830 | MS.gene82833:intron | 25.0% |
| !!! | ACATTATTTTTGCTTTGCTT+TGG | + | chr6.1:999919-999938 | MS.gene82833:intron | 25.0% |
| !!! | AGAAAGATTATTTTTTGGTC+GGG | - | chr6.1:999320-999339 | None:intergenic | 25.0% |
| !!! | ATTATTTTTGCTTTGCTTTG+GGG | + | chr6.1:999921-999940 | MS.gene82833:intron | 25.0% |
| !!! | ATTTTGAGAGTTTAGATGAA+TGG | + | chr6.1:997403-997422 | MS.gene82833:intron | 25.0% |
| !!! | CATTATTTTTGCTTTGCTTT+GGG | + | chr6.1:999920-999939 | MS.gene82833:intron | 25.0% |
| !!! | GAGAAAGATTATTTTTTGGT+CGG | - | chr6.1:999321-999340 | None:intergenic | 25.0% |
| !!! | GGGTTTCTCAATTTTTTTTT+TGG | - | chr6.1:998222-998241 | None:intergenic | 25.0% |
| !!! | TGTTTTTGTATAAGCTATCT+TGG | + | chr6.1:997832-997851 | MS.gene82833:intron | 25.0% |
| !!! | TTGTTTTGATAAATTAAGCC+TGG | - | chr6.1:1000499-1000518 | None:intergenic | 25.0% |
| AAAAAAAATTGAGAAACCCG+TGG | + | chr6.1:998223-998242 | MS.gene82833:intron | 30.0% | |
| AAAAGGTTCAAACTACGAAT+AGG | + | chr6.1:999180-999199 | MS.gene82833:intron | 30.0% | |
| AAAGATAAGTTTGTGAGATC+TGG | + | chr6.1:999776-999795 | MS.gene82833:intron | 30.0% | |
| AAAGGTTCAAACTACGAATA+GGG | + | chr6.1:999181-999200 | MS.gene82833:intron | 30.0% | |
| AACACAGTATTGTCAAATAG+CGG | + | chr6.1:998520-998539 | MS.gene82833:intron | 30.0% | |
| AAGATATTGTTGAGTTTGCA+GGG | - | chr6.1:1001911-1001930 | None:intergenic | 30.0% | |
| AATAATATATCGCACCATCT+TGG | + | chr6.1:1000013-1000032 | MS.gene82833:intron | 30.0% | |
| AATAATCATGGAATCACTGA+TGG | + | chr6.1:1000310-1000329 | MS.gene82833:CDS | 30.0% | |
| ACTAAGTAAAATCAGCTACA+TGG | - | chr6.1:997547-997566 | None:intergenic | 30.0% | |
| ACTACCGTTTATTCTTATTC+TGG | + | chr6.1:1001679-1001698 | MS.gene82833:intron | 30.0% | |
| AGGACCAGAATAAGAATAAA+CGG | - | chr6.1:1001686-1001705 | None:intergenic | 30.0% | |
| AGTTTACACATAAGCACTAA+GGG | - | chr6.1:997779-997798 | None:intergenic | 30.0% | |
| ATAAATCATAATGAGGTTGG+TGG | + | chr6.1:998138-998157 | MS.gene82833:intron | 30.0% | |
| ATAATCATGGAATCACTGAT+GGG | + | chr6.1:1000311-1000330 | MS.gene82833:CDS | 30.0% | |
| ATGAATGAAGAAAACGACAA+AGG | + | chr6.1:1001501-1001520 | MS.gene82833:intron | 30.0% | |
| CATATGCATAAAGTTCTCTA+TGG | - | chr6.1:1001551-1001570 | None:intergenic | 30.0% | |
| GATTGCAATCTATACAACAA+TGG | + | chr6.1:999462-999481 | MS.gene82833:intron | 30.0% | |
| GTAGCAAGATAGTAAAACAT+GGG | + | chr6.1:998891-998910 | MS.gene82833:intron | 30.0% | |
| GTATCTGTTGGAAATAATCA+TGG | + | chr6.1:1000298-1000317 | MS.gene82833:CDS | 30.0% | |
| GTTTATGGACAAACAGATAA+TGG | + | chr6.1:996985-997004 | MS.gene82833:CDS | 30.0% | |
| GTTTGACATACAACATATAC+AGG | + | chr6.1:1001720-1001739 | MS.gene82833:intron | 30.0% | |
| TAGTTTACACATAAGCACTA+AGG | - | chr6.1:997780-997799 | None:intergenic | 30.0% | |
| TATCAACTATTTGACAACAC+TGG | - | chr6.1:998437-998456 | None:intergenic | 30.0% | |
| TATTTAATCGTCAGCCAAAA+AGG | + | chr6.1:1001421-1001440 | MS.gene82833:intron | 30.0% | |
| TCAAACAAAAGAGTAAAAGG+AGG | - | chr6.1:1001706-1001725 | None:intergenic | 30.0% | |
| TCATAATATCATAACCTGTG+AGG | - | chr6.1:1000990-1001009 | None:intergenic | 30.0% | |
| TCGAACAATGAAGAAACATA+TGG | + | chr6.1:1000180-1000199 | MS.gene82833:CDS | 30.0% | |
| TCTATCGTTTACAACTCATA+TGG | + | chr6.1:1001034-1001053 | MS.gene82833:intron | 30.0% | |
| TTGTTCTTAGGATAATGCTA+GGG | + | chr6.1:998655-998674 | MS.gene82833:intron | 30.0% | |
| TTTCATGTATCAGACTAATC+TGG | + | chr6.1:999952-999971 | MS.gene82833:intron | 30.0% | |
| ! | AAGTTTCAGCATTGAATGTT+TGG | + | chr6.1:999799-999818 | MS.gene82833:intron | 30.0% |
| ! | AATTTGCATCATGTTCTAGA+AGG | + | chr6.1:1000205-1000224 | MS.gene82833:CDS | 30.0% |
| ! | AATTTTGTGAATGTGGTTGT+TGG | + | chr6.1:1001165-1001184 | MS.gene82833:intron | 30.0% |
| ! | TGATTTTACTTAGTGGGATA+TGG | + | chr6.1:997553-997572 | MS.gene82833:intron | 30.0% |
| ! | TTGACATAACTTTTGCACTA+TGG | + | chr6.1:1000813-1000832 | MS.gene82833:intron | 30.0% |
| !! | ACACATTCCATTGTTTTGTA+AGG | + | chr6.1:1001445-1001464 | MS.gene82833:intron | 30.0% |
| !! | ACATAAGTTTTGTGACTGTT+TGG | - | chr6.1:997886-997905 | None:intergenic | 30.0% |
| !! | AGTGAGAATTACTTTGGAAT+TGG | - | chr6.1:997245-997264 | None:intergenic | 30.0% |
| !! | ATGTAGCTGATTTTACTTAG+TGG | + | chr6.1:997546-997565 | MS.gene82833:intron | 30.0% |
| !! | CATAAGTTTTGTGACTGTTT+GGG | - | chr6.1:997885-997904 | None:intergenic | 30.0% |
| !! | CATTAATTTCTGGCAACATT+TGG | + | chr6.1:1000406-1000425 | MS.gene82833:intron | 30.0% |
| !! | GGAAAAGCATTGTAAAAGAA+AGG | - | chr6.1:1000954-1000973 | None:intergenic | 30.0% |
| !! | GTCGTTTTCTTCATTCATTT+AGG | - | chr6.1:1001499-1001518 | None:intergenic | 30.0% |
| !! | GTGTTTTTACATGCTACTAT+TGG | + | chr6.1:1001610-1001629 | MS.gene82833:intron | 30.0% |
| !! | TGTAGCTGATTTTACTTAGT+GGG | + | chr6.1:997547-997566 | MS.gene82833:intron | 30.0% |
| !! | TTGTCACTTTAGTTAACTCT+GGG | + | chr6.1:1000735-1000754 | MS.gene82833:intron | 30.0% |
| !!! | AGCCTTTGTTACTTTTTCTT+AGG | - | chr6.1:1001397-1001416 | None:intergenic | 30.0% |
| !!! | CATGCTTTTTTGTTGTTCTT+AGG | + | chr6.1:998643-998662 | MS.gene82833:intron | 30.0% |
| !!! | GTCGACGAATTTTTAGAATA+GGG | - | chr6.1:998200-998219 | None:intergenic | 30.0% |
| !!! | TAGAGGAAGTATTTCTTTTG+TGG | - | chr6.1:999062-999081 | None:intergenic | 30.0% |
| !!! | TCGACGAATTTTTAGAATAG+GGG | - | chr6.1:998199-998218 | None:intergenic | 30.0% |
| AAAATAAGCTCAACCCAAAC+AGG | + | chr6.1:997753-997772 | MS.gene82833:intron | 35.0% | |
| AAAGATGAAAATTTCGAGGC+AGG | + | chr6.1:999237-999256 | MS.gene82833:intron | 35.0% | |
| AACATATACAGGTGCAAACA+GGG | + | chr6.1:1001731-1001750 | MS.gene82833:intron | 35.0% | |
| AACGATGAAGAAGAATGATC+AGG | - | chr6.1:997199-997218 | None:intergenic | 35.0% | |
| AACTCCGAATAAATTGTGGT+TGG | + | chr6.1:998041-998060 | MS.gene82833:intron | 35.0% | |
| AAGAAAACCCTAAACCAAGA+TGG | - | chr6.1:1000030-1000049 | None:intergenic | 35.0% | |
| AAGATGAAAATTTCGAGGCA+GGG | + | chr6.1:999238-999257 | MS.gene82833:intron | 35.0% | |
| AAGGTCAAACAACACGATAT+AGG | + | chr6.1:999277-999296 | MS.gene82833:intron | 35.0% | |
| AGATATTGTTGAGTTTGCAG+GGG | - | chr6.1:1001910-1001929 | None:intergenic | 35.0% | |
| AGGTCAAACAACACGATATA+GGG | + | chr6.1:999278-999297 | MS.gene82833:intron | 35.0% | |
| ATACAACCTTGATATCTCCT+AGG | - | chr6.1:1000885-1000904 | None:intergenic | 35.0% | |
| ATATGGGTCTTACTTACGTA+TGG | + | chr6.1:998767-998786 | MS.gene82833:intron | 35.0% | |
| ATTAGATGTCAGTGTCAAAC+TGG | - | chr6.1:998309-998328 | None:intergenic | 35.0% | |
| ATTGGTGTATAATTGCGACT+CGG | + | chr6.1:1001628-1001647 | MS.gene82833:intron | 35.0% | |
| CATGCGATTTGACTCATTAT+GGG | + | chr6.1:999405-999424 | MS.gene82833:intron | 35.0% | |
| CGAGAAAGATGAAAATTTCG+AGG | + | chr6.1:999233-999252 | MS.gene82833:intron | 35.0% | |
| CGATTGAAGTTAGTGCTTAA+TGG | + | chr6.1:998608-998627 | MS.gene82833:intron | 35.0% | |
| CTAACTTCAATCGTAAAACG+CGG | - | chr6.1:998601-998620 | None:intergenic | 35.0% | |
| CTGGATAAGCTTATGAATGA+AGG | + | chr6.1:1002798-1002817 | MS.gene82833:CDS | 35.0% | |
| CTGGATATGGTACATTATCT+GGG | + | chr6.1:1002466-1002485 | MS.gene82833:CDS | 35.0% | |
| GAAGATATTGTTGAGTTTGC+AGG | - | chr6.1:1001912-1001931 | None:intergenic | 35.0% | |
| GAATTGGAATCAGAATTCCA+AGG | - | chr6.1:997229-997248 | None:intergenic | 35.0% | |
| GACTGTTTACTACCATATTG+AGG | - | chr6.1:1002522-1002541 | None:intergenic | 35.0% | |
| GAGAAACTCCGAATAAATTG+TGG | + | chr6.1:998037-998056 | MS.gene82833:intron | 35.0% | |
| GAGTTCTATGGATGATTTGA+AGG | + | chr6.1:1000276-1000295 | MS.gene82833:CDS | 35.0% | |
| GATAAGCTTATGAATGAAGG+TGG | + | chr6.1:1002801-1002820 | MS.gene82833:CDS | 35.0% | |
| GCAATTTGGGTAACTATACT+TGG | + | chr6.1:1000574-1000593 | MS.gene82833:intron | 35.0% | |
| GGTAGCAAGATAGTAAAACA+TGG | + | chr6.1:998890-998909 | MS.gene82833:intron | 35.0% | |
| GTAGCTAGGAACAATATCAT+CGG | - | chr6.1:997152-997171 | None:intergenic | 35.0% | |
| GTATAGCATTAGAGTCTGTT+TGG | + | chr6.1:997589-997608 | MS.gene82833:intron | 35.0% | |
| GTTCACGATTCTTCTTGTTA+AGG | - | chr6.1:997060-997079 | None:intergenic | 35.0% | |
| GTTGGAGAATATTCTTTCTG+AGG | + | chr6.1:1000345-1000364 | MS.gene82833:CDS | 35.0% | |
| GTTGTTCTTAGGATAATGCT+AGG | + | chr6.1:998654-998673 | MS.gene82833:intron | 35.0% | |
| TAAGTCTGAGAAGGAACATA+AGG | - | chr6.1:1002318-1002337 | None:intergenic | 35.0% | |
| TATGGGTCTTACTTACGTAT+GGG | + | chr6.1:998768-998787 | MS.gene82833:intron | 35.0% | |
| TCAAAATACACTTGCAAGAG+TGG | - | chr6.1:998359-998378 | None:intergenic | 35.0% | |
| TCTATCGTTTACAACTCCTA+TGG | + | chr6.1:1001103-1001122 | MS.gene82833:intron | 35.0% | |
| TCTGCCAACCACAATTTATT+CGG | - | chr6.1:998048-998067 | None:intergenic | 35.0% | |
| TCTGGATATGGTACATTATC+TGG | + | chr6.1:1002465-1002484 | MS.gene82833:CDS | 35.0% | |
| TGTAGCGTTGTGTAATACAT+AGG | + | chr6.1:999983-1000002 | MS.gene82833:intron | 35.0% | |
| TGTGGAAGATTATAAGACGA+AGG | - | chr6.1:1001934-1001953 | None:intergenic | 35.0% | |
| TGTTTACTACCATATTGAGG+TGG | - | chr6.1:1002519-1002538 | None:intergenic | 35.0% | |
| TTAATGTTAGAAGTTGAGGC+AGG | - | chr6.1:1000392-1000411 | None:intergenic | 35.0% | |
| TTACTTAGTGGGATATGGTT+TGG | + | chr6.1:997558-997577 | MS.gene82833:intron | 35.0% | |
| TTAGCGTTATCATTTCTCAC+AGG | - | chr6.1:1001577-1001596 | None:intergenic | 35.0% | |
| TTATATACTTAGGGCCTGTT+TGG | - | chr6.1:997949-997968 | None:intergenic | 35.0% | |
| TTGAAGTTAGTGCTTAATGG+AGG | + | chr6.1:998611-998630 | MS.gene82833:intron | 35.0% | |
| ! | AGTTCTAACACTGTCAAGAT+CGG | + | chr6.1:998836-998855 | MS.gene82833:intron | 35.0% |
| ! | CAATGGAATGTGTTCCTTTT+TGG | - | chr6.1:1001438-1001457 | None:intergenic | 35.0% |
| ! | CCATAGTTCTGCACAAAATA+AGG | - | chr6.1:1000076-1000095 | None:intergenic | 35.0% |
| ! | GTATTTCTTTTGTGGACTTC+TGG | - | chr6.1:999054-999073 | None:intergenic | 35.0% |
| ! | GTGTTGACCTTACAAAACAA+TGG | - | chr6.1:1001455-1001474 | None:intergenic | 35.0% |
| ! | TTGTCGACTATATCATCAAC+AGG | - | chr6.1:1002687-1002706 | None:intergenic | 35.0% |
| !! | AGTGCAGAGGTATTCTAAAT+TGG | + | chr6.1:998247-998266 | MS.gene82833:intron | 35.0% |
| !! | GATGATTTGAAGGTATCTGT+TGG | + | chr6.1:1000286-1000305 | MS.gene82833:CDS | 35.0% |
| !! | GTTGTCACTTTAGTTAACTC+TGG | + | chr6.1:1000734-1000753 | MS.gene82833:intron | 35.0% |
| !! | TATTGATTTGGAAGTTGAGC+TGG | - | chr6.1:1002024-1002043 | None:intergenic | 35.0% |
| !! | TGTCACTTTAGTTAACTCTG+GGG | + | chr6.1:1000736-1000755 | MS.gene82833:intron | 35.0% |
| !!! | ACGAATTTTTAGAATAGGGG+AGG | - | chr6.1:998196-998215 | None:intergenic | 35.0% |
| !!! | CCTTATTTTGTGCAGAACTA+TGG | + | chr6.1:1000073-1000092 | MS.gene82833:intron | 35.0% |
| !!! | GGTCGACGAATTTTTAGAAT+AGG | - | chr6.1:998201-998220 | None:intergenic | 35.0% |
| AAGCTTATGAATGAAGGTGG+TGG | + | chr6.1:1002804-1002823 | MS.gene82833:CDS | 40.0% | |
| AAGTTAGTGCTTAATGGAGG+AGG | + | chr6.1:998614-998633 | MS.gene82833:intron | 40.0% | |
| AATACACTTGCAAGAGTGGA+AGG | - | chr6.1:998355-998374 | None:intergenic | 40.0% | |
| ACAGAAGACATGAACAGAGA+GGG | + | chr6.1:999144-999163 | MS.gene82833:intron | 40.0% | |
| ACATATACAGGTGCAAACAG+GGG | + | chr6.1:1001732-1001751 | MS.gene82833:intron | 40.0% | |
| AGGTGGTAAACTTTGTTGAG+GGG | - | chr6.1:1002001-1002020 | None:intergenic | 40.0% | |
| AGTTGACCTAAATACAGTGC+TGG | + | chr6.1:1002779-1002798 | MS.gene82833:CDS | 40.0% | |
| ATATCGCACCATCTTGGTTT+AGG | + | chr6.1:1000019-1000038 | MS.gene82833:intron | 40.0% | |
| ATGAGTGGTTTCAGATGCTA+TGG | - | chr6.1:998980-998999 | None:intergenic | 40.0% | |
| ATGATCAGGAAGTGAACGAA+TGG | - | chr6.1:997185-997204 | None:intergenic | 40.0% | |
| ATTCATCACAAAAATGGCGG+TGG | + | chr6.1:997118-997137 | MS.gene82833:CDS | 40.0% | |
| ATTCCCTAGAGATCATGTGA+GGG | + | chr6.1:1002722-1002741 | MS.gene82833:CDS | 40.0% | |
| ATTTCCTGAGATTGAACAGG+TGG | - | chr6.1:1002096-1002115 | None:intergenic | 40.0% | |
| CAACATATACAGGTGCAAAC+AGG | + | chr6.1:1001730-1001749 | MS.gene82833:intron | 40.0% | |
| CACAAGCATATGTTTGCCAT+AGG | - | chr6.1:1001122-1001141 | None:intergenic | 40.0% | |
| CAGCCAGCATATACACAAAT+GGG | - | chr6.1:1000841-1000860 | None:intergenic | 40.0% | |
| CATCCATAGAACTCTCAAGA+TGG | - | chr6.1:1000270-1000289 | None:intergenic | 40.0% | |
| GAATCACTGATGGGAAATTG+AGG | + | chr6.1:1000320-1000339 | MS.gene82833:CDS | 40.0% | |
| GAGAGATGTGAACTTCTGAA+TGG | + | chr6.1:999203-999222 | MS.gene82833:intron | 40.0% | |
| GAGGTGGTAAACTTTGTTGA+GGG | - | chr6.1:1002002-1002021 | None:intergenic | 40.0% | |
| GCATGCGATTTGACTCATTA+TGG | + | chr6.1:999404-999423 | MS.gene82833:intron | 40.0% | |
| GCTTATCCAGCACTGTATTT+AGG | - | chr6.1:1002788-1002807 | None:intergenic | 40.0% | |
| GGAATTTCCTGAGATTGAAC+AGG | - | chr6.1:1002099-1002118 | None:intergenic | 40.0% | |
| GGTATTCTATGATTCTGCCT+AGG | + | chr6.1:998857-998876 | MS.gene82833:intron | 40.0% | |
| GGTCAAACAACACGATATAG+GGG | + | chr6.1:999279-999298 | MS.gene82833:intron | 40.0% | |
| GTCGATGAAATCGTTGTTGT+TGG | - | chr6.1:997038-997057 | None:intergenic | 40.0% | |
| GTCTGCTGATATTGTTGATG+CGG | - | chr6.1:1002180-1002199 | None:intergenic | 40.0% | |
| TAAATTGTGGTTGGCAGAGA+TGG | + | chr6.1:998050-998069 | MS.gene82833:intron | 40.0% | |
| TAGAGATCATGTGAGGGAAA+CGG | + | chr6.1:1002728-1002747 | MS.gene82833:CDS | 40.0% | |
| TATCGCACCATCTTGGTTTA+GGG | + | chr6.1:1000020-1000039 | MS.gene82833:intron | 40.0% | |
| TCAAACAAGCCAATCCAAAC+AGG | + | chr6.1:997932-997951 | MS.gene82833:intron | 40.0% | |
| TCACCATCTTGAGAGTTCTA+TGG | + | chr6.1:1000264-1000283 | MS.gene82833:CDS | 40.0% | |
| TCTTAGGATAATGCTAGGGA+GGG | + | chr6.1:998659-998678 | MS.gene82833:intron | 40.0% | |
| TGATCAGGAAGTGAACGAAT+GGG | - | chr6.1:997184-997203 | None:intergenic | 40.0% | |
| TGTGAACTTCTGAATGGAGA+AGG | + | chr6.1:999209-999228 | MS.gene82833:intron | 40.0% | |
| TGTGCAGAACTATGGTTCTT+TGG | + | chr6.1:1000081-1000100 | MS.gene82833:intron | 40.0% | |
| TTCTTAGGATAATGCTAGGG+AGG | + | chr6.1:998658-998677 | MS.gene82833:intron | 40.0% | |
| TTTCCCTCACATGATCTCTA+GGG | - | chr6.1:1002728-1002747 | None:intergenic | 40.0% | |
| ! | ATGCAGTAGGTATTGCTTGT+GGG | - | chr6.1:1002617-1002636 | None:intergenic | 40.0% |
| ! | ATGGGTTGAAAATCGTAGCT+AGG | - | chr6.1:997166-997185 | None:intergenic | 40.0% |
| ! | CATTTGTGTATATGCTGGCT+GGG | + | chr6.1:1000840-1000859 | MS.gene82833:intron | 40.0% |
| ! | CTTACGTATGGGCAACTTTT+AGG | + | chr6.1:998779-998798 | MS.gene82833:intron | 40.0% |
| ! | GGATTCTTTTGAACCTGCAA+AGG | + | chr6.1:1000102-1000121 | MS.gene82833:CDS | 40.0% |
| ! | GTCACTTTAGTTAACTCTGG+GGG | + | chr6.1:1000737-1000756 | MS.gene82833:intron | 40.0% |
| ! | TGATTCTGCCTAGGATTAGT+TGG | + | chr6.1:998866-998885 | MS.gene82833:intron | 40.0% |
| ! | TTTTCTACAGTCACCTTTGC+AGG | - | chr6.1:1000118-1000137 | None:intergenic | 40.0% |
| !! | AAAGGCATCATCACAGATAG+AGG | - | chr6.1:1000936-1000955 | None:intergenic | 40.0% |
| !! | ATAATGGATCTAAGCCATGG+AGG | + | chr6.1:997001-997020 | MS.gene82833:CDS | 40.0% |
| !! | ATTCTGCCTAGGATTAGTTG+GGG | + | chr6.1:998868-998887 | MS.gene82833:intron | 40.0% |
| !! | CAGATAATGGATCTAAGCCA+TGG | + | chr6.1:996998-997017 | MS.gene82833:CDS | 40.0% |
| !! | CTGAGAGTATTGATGATGAG+GGG | - | chr6.1:1002202-1002221 | None:intergenic | 40.0% |
| !! | CTTCATCGTTTTCAAGACCT+TGG | + | chr6.1:997209-997228 | MS.gene82833:CDS | 40.0% |
| !! | GATTCTGCCTAGGATTAGTT+GGG | + | chr6.1:998867-998886 | MS.gene82833:intron | 40.0% |
| !! | GCTGAGAGTATTGATGATGA+GGG | - | chr6.1:1002203-1002222 | None:intergenic | 40.0% |
| !! | GGGATCTGAGAGTATTGATT+TGG | - | chr6.1:1002036-1002055 | None:intergenic | 40.0% |
| !! | GGGTTTCTGAAGTACAGAAA+AGG | + | chr6.1:999258-999277 | MS.gene82833:intron | 40.0% |
| !! | GTGAGTTCTGGTTTCTACTT+GGG | - | chr6.1:1000248-1000267 | None:intergenic | 40.0% |
| AATGCAAGCTCAGCTACAAC+TGG | + | chr6.1:1001783-1001802 | MS.gene82833:CDS | 45.0% | |
| ACCTCAACTGCAATCTTCCA+TGG | + | chr6.1:1002272-1002291 | MS.gene82833:CDS | 45.0% | |
| ACCTGTGAGGCTATATTGTG+CGG | - | chr6.1:1000977-1000996 | None:intergenic | 45.0% | |
| ACCTTTCGCTCACAATAGCT+GGG | + | chr6.1:998077-998096 | MS.gene82833:intron | 45.0% | |
| ACTCTCAAGATGGTGAGTTC+TGG | - | chr6.1:1000260-1000279 | None:intergenic | 45.0% | |
| ACTGAGCCATATCGATATGG+TGG | + | chr6.1:1002492-1002511 | MS.gene82833:CDS | 45.0% | |
| AGAATACCTCTGCACTTCCA+CGG | - | chr6.1:998243-998262 | None:intergenic | 45.0% | |
| AGTCGACAAAGTTGCCACTA+TGG | + | chr6.1:1002698-1002717 | MS.gene82833:CDS | 45.0% | |
| ATAAGCACTAAGGGCCTGTT+TGG | - | chr6.1:997770-997789 | None:intergenic | 45.0% | |
| ATAGTGGCGCTATAGCATAG+CGG | + | chr6.1:998456-998475 | MS.gene82833:intron | 45.0% | |
| ATATGCAGCAACAGAGAGGT+TGG | + | chr6.1:1002829-1002848 | MS.gene82833:CDS | 45.0% | |
| ATCATGTGAGGGAAACGGTT+CGG | + | chr6.1:1002733-1002752 | MS.gene82833:CDS | 45.0% | |
| ATGGAAGATTGCAGTTGAGG+TGG | - | chr6.1:1002273-1002292 | None:intergenic | 45.0% | |
| ATGTTAGAAGTTGAGGCAGG+AGG | - | chr6.1:1000389-1000408 | None:intergenic | 45.0% | |
| CAACACGATATAGGGGAACA+AGG | + | chr6.1:999286-999305 | MS.gene82833:intron | 45.0% | |
| CAACCTTCCCAACAGTTCTA+TGG | + | chr6.1:1002387-1002406 | MS.gene82833:CDS | 45.0% | |
| CACAGAAGACATGAACAGAG+AGG | + | chr6.1:999143-999162 | MS.gene82833:intron | 45.0% | |
| CATAAGGTGGTTCCTCTAGA+TGG | - | chr6.1:1002302-1002321 | None:intergenic | 45.0% | |
| CCAGCCAGCATATACACAAA+TGG | - | chr6.1:1000842-1000861 | None:intergenic | 45.0% | |
| CCATATCGATATGGCTCAGT+AGG | - | chr6.1:1002492-1002511 | None:intergenic | 45.0% | |
| CCATTTGTGTATATGCTGGC+TGG | + | chr6.1:1000839-1000858 | MS.gene82833:intron | 45.0% | |
| CCTACTGAGCCATATCGATA+TGG | + | chr6.1:1002489-1002508 | MS.gene82833:CDS | 45.0% | |
| CCTCAACTGCAATCTTCCAT+GGG | + | chr6.1:1002273-1002292 | MS.gene82833:CDS | 45.0% | |
| CGGTGTTCCATAGAACTGTT+GGG | - | chr6.1:1002397-1002416 | None:intergenic | 45.0% | |
| GATTCCCTAGAGATCATGTG+AGG | + | chr6.1:1002721-1002740 | MS.gene82833:CDS | 45.0% | |
| GCACCCATTTGTGTATATGC+TGG | + | chr6.1:1000835-1000854 | MS.gene82833:intron | 45.0% | |
| GCGAGTTACTCTTCTGGATA+TGG | + | chr6.1:1002453-1002472 | MS.gene82833:CDS | 45.0% | |
| GGAGGTGGTAAACTTTGTTG+AGG | - | chr6.1:1002003-1002022 | None:intergenic | 45.0% | |
| GGTGGTAAACTTTGTTGAGG+GGG | - | chr6.1:1002000-1002019 | None:intergenic | 45.0% | |
| GTCACAACTACCTAACGCTT+CGG | + | chr6.1:1002539-1002558 | MS.gene82833:CDS | 45.0% | |
| GTCGACAAAGTTGCCACTAT+GGG | + | chr6.1:1002699-1002718 | MS.gene82833:CDS | 45.0% | |
| GTCTGAGAAGGAACATAAGG+TGG | - | chr6.1:1002315-1002334 | None:intergenic | 45.0% | |
| GTTCCATAGAACTGTTGGGA+AGG | - | chr6.1:1002393-1002412 | None:intergenic | 45.0% | |
| GTTTCCCTCACATGATCTCT+AGG | - | chr6.1:1002729-1002748 | None:intergenic | 45.0% | |
| TAAGCACTAAGGGCCTGTTT+GGG | - | chr6.1:997769-997788 | None:intergenic | 45.0% | |
| TACTTAGGGCCTGTTTGGAT+TGG | - | chr6.1:997944-997963 | None:intergenic | 45.0% | |
| TAGAACTGTTGGGAAGGTTG+AGG | - | chr6.1:1002387-1002406 | None:intergenic | 45.0% | |
| TGAAAGATGACTTCCACGCA+AGG | - | chr6.1:999103-999122 | None:intergenic | 45.0% | |
| TGATGGGAAATTGAGGCTGT+TGG | + | chr6.1:1000327-1000346 | MS.gene82833:CDS | 45.0% | |
| TGCTGATATTGTTGATGCGG+AGG | - | chr6.1:1002177-1002196 | None:intergenic | 45.0% | |
| TGGAAGATGATGATCCTCCA+TGG | - | chr6.1:997018-997037 | None:intergenic | 45.0% | |
| TGGGAAAATGGTGGTCATGT+GGG | + | chr6.1:1000859-1000878 | MS.gene82833:intron | 45.0% | |
| TGTTAGAAGTTGAGGCAGGA+GGG | - | chr6.1:1000388-1000407 | None:intergenic | 45.0% | |
| TTGGGAGGATAAGTCTGAGA+AGG | - | chr6.1:1002327-1002346 | None:intergenic | 45.0% | |
| ! | AACAGGGGTGCATGATATCA+AGG | + | chr6.1:1001747-1001766 | MS.gene82833:CDS | 45.0% |
| ! | ATCTCTAGGGAATCCCATAG+TGG | - | chr6.1:1002715-1002734 | None:intergenic | 45.0% |
| ! | ATCTCTCTGAGGAACAGTTG+GGG | - | chr6.1:1002061-1002080 | None:intergenic | 45.0% |
| ! | GATCTCTCTGAGGAACAGTT+GGG | - | chr6.1:1002062-1002081 | None:intergenic | 45.0% |
| ! | GATGCAGTAGGTATTGCTTG+TGG | - | chr6.1:1002618-1002637 | None:intergenic | 45.0% |
| ! | GATGGTGGTTCATATCCTTG+TGG | - | chr6.1:1002420-1002439 | None:intergenic | 45.0% |
| ! | GGCAGTTGGTATTGCTGATT+TGG | - | chr6.1:1002120-1002139 | None:intergenic | 45.0% |
| ! | GTATATGCTGGCTGGGAAAA+TGG | + | chr6.1:1000847-1000866 | MS.gene82833:intron | 45.0% |
| ! | TGATTTGGAAGTTGAGCTGG+AGG | - | chr6.1:1002021-1002040 | None:intergenic | 45.0% |
| ! | TTCTTTTGTGGACTTCTGGC+TGG | - | chr6.1:999050-999069 | None:intergenic | 45.0% |
| ! | TTGCAGTTGAGGTGGATTTC+CGG | - | chr6.1:1002265-1002284 | None:intergenic | 45.0% |
| !! | AACAGAGAGGTTGGTTTGGT+AGG | + | chr6.1:1002838-1002857 | MS.gene82833:CDS | 45.0% |
| !! | ACAGATGAAGTTTGCTGCAC+AGG | - | chr6.1:1001874-1001893 | None:intergenic | 45.0% |
| !! | GGCTGAGAGTATTGATGATG+AGG | - | chr6.1:1002204-1002223 | None:intergenic | 45.0% |
| !! | GGTGAGTTCTGGTTTCTACT+TGG | - | chr6.1:1000249-1000268 | None:intergenic | 45.0% |
| !! | TATGGTGGACCACCTCAATA+TGG | + | chr6.1:1002507-1002526 | MS.gene82833:CDS | 45.0% |
| !! | TCTTTTGTGGACTTCTGGCT+GGG | - | chr6.1:999049-999068 | None:intergenic | 45.0% |
| !! | TTCTAGAAGGTGTTAGTGCG+CGG | + | chr6.1:1000218-1000237 | MS.gene82833:CDS | 45.0% |
| !! | TTCTGCCTAGGATTAGTTGG+GGG | + | chr6.1:998869-998888 | MS.gene82833:intron | 45.0% |
| !!! | ATTATTTTAAATTTCTTTAA+TGG | + | chr6.1:1001273-1001292 | MS.gene82833:intron | 5.0% |
| !!! | TTATTTTAAATTTCTTTAAT+GGG | + | chr6.1:1001274-1001293 | MS.gene82833:intron | 5.0% |
| AACTGTTGGGAAGGTTGAGG+AGG | - | chr6.1:1002384-1002403 | None:intergenic | 50.0% | |
| ACAACTACCTAACGCTTCGG+CGG | + | chr6.1:1002542-1002561 | MS.gene82833:CDS | 50.0% | |
| ACTCTCAAGCAATGCCAGGT+CGG | - | chr6.1:998170-998189 | None:intergenic | 50.0% | |
| ACTGCATCTGCAGTAAGTGG+TGG | + | chr6.1:1002630-1002649 | MS.gene82833:CDS | 50.0% | |
| AGGGTCGAGAGAGATGGAAA+AGG | + | chr6.1:999163-999182 | MS.gene82833:intron | 50.0% | |
| CCACTTACTGCAGATGCAGT+AGG | - | chr6.1:1002630-1002649 | None:intergenic | 50.0% | |
| CCCATGGAAGATTGCAGTTG+AGG | - | chr6.1:1002276-1002295 | None:intergenic | 50.0% | |
| CCTACTGCATCTGCAGTAAG+TGG | + | chr6.1:1002627-1002646 | MS.gene82833:CDS | 50.0% | |
| CCTGTGAGGCTATATTGTGC+GGG | - | chr6.1:1000976-1000995 | None:intergenic | 50.0% | |
| CCTTTCGCTCACAATAGCTG+GGG | + | chr6.1:998078-998097 | MS.gene82833:intron | 50.0% | |
| CTGGGAAAATGGTGGTCATG+TGG | + | chr6.1:1000858-1000877 | MS.gene82833:intron | 50.0% | |
| CTGTGAGGCTATATTGTGCG+GGG | - | chr6.1:1000975-1000994 | None:intergenic | 50.0% | |
| GAAACCACGGGGATTGATTG+TGG | - | chr6.1:1001952-1001971 | None:intergenic | 50.0% | |
| GAATACCTCTGCACTTCCAC+GGG | - | chr6.1:998242-998261 | None:intergenic | 50.0% | |
| GACCTTTCGCTCACAATAGC+TGG | + | chr6.1:998076-998095 | MS.gene82833:intron | 50.0% | |
| GCGGTGTTCCATAGAACTGT+TGG | - | chr6.1:1002398-1002417 | None:intergenic | 50.0% | |
| GCTGCTGAGTTAAAGGCAGT+TGG | - | chr6.1:1002134-1002153 | None:intergenic | 50.0% | |
| GGATGTGGCTGCTGAGTTAA+AGG | - | chr6.1:1002141-1002160 | None:intergenic | 50.0% | |
| GGCAAGTATGGATCTCTCTG+AGG | - | chr6.1:1002072-1002091 | None:intergenic | 50.0% | |
| GGTAAACTTTGTTGAGGGGG+AGG | - | chr6.1:1001997-1002016 | None:intergenic | 50.0% | |
| GGTGATATGCAGCAACAGAG+AGG | + | chr6.1:1002825-1002844 | MS.gene82833:CDS | 50.0% | |
| GGTGGTCCACCATATCGATA+TGG | - | chr6.1:1002501-1002520 | None:intergenic | 50.0% | |
| GGTGGTTCATATCCTTGTGG+CGG | - | chr6.1:1002417-1002436 | None:intergenic | 50.0% | |
| GTGTATGCTCTCGTGTAACC+AGG | + | chr6.1:1000478-1000497 | MS.gene82833:intron | 50.0% | |
| GTTCGGAAGCTGACAGAGAA+TGG | + | chr6.1:1002750-1002769 | MS.gene82833:CDS | 50.0% | |
| TCCTGAGATTGAACAGGTGG+TGG | - | chr6.1:1002093-1002112 | None:intergenic | 50.0% | |
| TCTGAGGAACAGTTGGGGTT+GGG | - | chr6.1:1002056-1002075 | None:intergenic | 50.0% | |
| TCTGCAGTAAGTGGTGGTTC+AGG | + | chr6.1:1002636-1002655 | MS.gene82833:CDS | 50.0% | |
| TCTTCCACAATCAATCCCCG+TGG | + | chr6.1:1001945-1001964 | MS.gene82833:CDS | 50.0% | |
| TGCATTAGGGGGAGAAACCA+CGG | - | chr6.1:1001965-1001984 | None:intergenic | 50.0% | |
| TGCTACCCCCAACTAATCCT+AGG | - | chr6.1:998877-998896 | None:intergenic | 50.0% | |
| TGTGGGCCTAGGAGATATCA+AGG | + | chr6.1:1000876-1000895 | MS.gene82833:intron | 50.0% | |
| TGTTGTGGAGGTAGATGAGG+CGG | - | chr6.1:1002228-1002247 | None:intergenic | 50.0% | |
| TTCCATGGGTCACCATCTAG+AGG | + | chr6.1:1002287-1002306 | MS.gene82833:CDS | 50.0% | |
| TTCCTCTAGATGGTGACCCA+TGG | - | chr6.1:1002292-1002311 | None:intergenic | 50.0% | |
| TTCTATGGAACACCGCCACA+AGG | + | chr6.1:1002402-1002421 | MS.gene82833:CDS | 50.0% | |
| TTCTCCTGGAGCTGGTAACA+GGG | + | chr6.1:1002659-1002678 | MS.gene82833:CDS | 50.0% | |
| TTGCTGCACAGGATCTGATG+TGG | - | chr6.1:1001863-1001882 | None:intergenic | 50.0% | |
| TTTGGAAGTTGAGCTGGAGG+TGG | - | chr6.1:1002018-1002037 | None:intergenic | 50.0% | |
| ! | ACTTCCACGCAAGGTTCTAG+TGG | - | chr6.1:999094-999113 | None:intergenic | 50.0% |
| ! | AGGTTGAGGAGGTGCATTAG+GGG | - | chr6.1:1001977-1001996 | None:intergenic | 50.0% |
| ! | CAGCAACAGAGAGGTTGGTT+TGG | + | chr6.1:1002834-1002853 | MS.gene82833:CDS | 50.0% |
| ! | CTTCCACGCAAGGTTCTAGT+GGG | - | chr6.1:999093-999112 | None:intergenic | 50.0% |
| ! | GAGGTTGAGGAGGTGCATTA+GGG | - | chr6.1:1001978-1001997 | None:intergenic | 50.0% |
| ! | GGATCTCTCTGAGGAACAGT+TGG | - | chr6.1:1002063-1002082 | None:intergenic | 50.0% |
| ! | GGTGGATTTCCGGATGAATG+CGG | - | chr6.1:1002255-1002274 | None:intergenic | 50.0% |
| ! | GTATTGCTTGTGGGAGTACG+CGG | - | chr6.1:1002608-1002627 | None:intergenic | 50.0% |
| ! | TATGCTGGCTGGGAAAATGG+TGG | + | chr6.1:1000850-1000869 | MS.gene82833:intron | 50.0% |
| ! | TATTGCTTGTGGGAGTACGC+GGG | - | chr6.1:1002607-1002626 | None:intergenic | 50.0% |
| ! | TGAACAGGTGGTGGCAAGTA+TGG | - | chr6.1:1002084-1002103 | None:intergenic | 50.0% |
| ! | TTCCACGCAAGGTTCTAGTG+GGG | - | chr6.1:999092-999111 | None:intergenic | 50.0% |
| ! | TTGAAGCATCAACAGCGCTC+TGG | - | chr6.1:1000144-1000163 | None:intergenic | 50.0% |
| AATGGTGGTCATGTGGGCCT+AGG | + | chr6.1:1000865-1000884 | MS.gene82833:intron | 55.0% | |
| ACAGAGAGGGTCGAGAGAGA+TGG | + | chr6.1:999157-999176 | MS.gene82833:intron | 55.0% | |
| AGCAGCCACATCCTCAACCA+GGG | + | chr6.1:1002148-1002167 | MS.gene82833:CDS | 55.0% | |
| CAACAGCCACCGCATTCATC+CGG | + | chr6.1:1002243-1002262 | MS.gene82833:CDS | 55.0% | |
| CACAGGATCTGATGTGGCAC+GGG | - | chr6.1:1001857-1001876 | None:intergenic | 55.0% | |
| CATTAGGGGGAGAAACCACG+GGG | - | chr6.1:1001963-1001982 | None:intergenic | 55.0% | |
| CCAGAAGAGTAACTCGCACC+AGG | - | chr6.1:1002450-1002469 | None:intergenic | 55.0% | |
| CCCCAGCTATTGTGAGCGAA+AGG | - | chr6.1:998081-998100 | None:intergenic | 55.0% | |
| CCCGCACAATATAGCCTCAC+AGG | + | chr6.1:1000973-1000992 | MS.gene82833:intron | 55.0% | |
| CCTGGTGCGAGTTACTCTTC+TGG | + | chr6.1:1002447-1002466 | MS.gene82833:CDS | 55.0% | |
| CTTTGTTGAGGGGGAGGTTG+AGG | - | chr6.1:1001991-1002010 | None:intergenic | 55.0% | |
| GAACCACCATCGAGTAGACC+TGG | + | chr6.1:1002429-1002448 | MS.gene82833:CDS | 55.0% | |
| GATGAATGCGGTGGCTGTTG+TGG | - | chr6.1:1002243-1002262 | None:intergenic | 55.0% | |
| GCACACTCTCAAGCAATGCC+AGG | - | chr6.1:998174-998193 | None:intergenic | 55.0% | |
| GCACAGGATCTGATGTGGCA+CGG | - | chr6.1:1001858-1001877 | None:intergenic | 55.0% | |
| GCATTAGGGGGAGAAACCAC+GGG | - | chr6.1:1001964-1001983 | None:intergenic | 55.0% | |
| GCCACCACCTGTTCAATCTC+AGG | + | chr6.1:1002089-1002108 | MS.gene82833:CDS | 55.0% | |
| GCTCACAATAGCTGGGGTGT+GGG | + | chr6.1:998084-998103 | MS.gene82833:intron | 55.0% | |
| GGATAATGCTAGGGAGGGTG+AGG | + | chr6.1:998664-998683 | MS.gene82833:intron | 55.0% | |
| GGATTTCCGGATGAATGCGG+TGG | - | chr6.1:1002252-1002271 | None:intergenic | 55.0% | |
| GGCTGTTGTGGAGGTAGATG+AGG | - | chr6.1:1002231-1002250 | None:intergenic | 55.0% | |
| GTTCTCCTGGAGCTGGTAAC+AGG | + | chr6.1:1002658-1002677 | MS.gene82833:CDS | 55.0% | |
| TAGGGAGGGTGAGGCTCATT+GGG | + | chr6.1:998673-998692 | MS.gene82833:intron | 55.0% | |
| TCTAGTGGGGCTGAAGGTAG+AGG | - | chr6.1:999079-999098 | None:intergenic | 55.0% | |
| TGGGTAACCGTTTCCACCAC+TGG | - | chr6.1:1002571-1002590 | None:intergenic | 55.0% | |
| ! | AGAAACCCGTGGAAGTGCAG+AGG | + | chr6.1:998234-998253 | MS.gene82833:intron | 55.0% |
| ! | AGTGGTGGTTCAGGTTCTCC+TGG | + | chr6.1:1002645-1002664 | MS.gene82833:CDS | 55.0% |
| ! | CAAGGTTCTAGTGGGGCTGA+AGG | - | chr6.1:999085-999104 | None:intergenic | 55.0% |
| ! | CTCTGAGGAACAGTTGGGGT+TGG | - | chr6.1:1002057-1002076 | None:intergenic | 55.0% |
| ! | CTGGGGTGTGGGTTATACTC+TGG | + | chr6.1:998095-998114 | MS.gene82833:intron | 55.0% |
| ! | GGAGGTTGAGGAGGTGCATT+AGG | - | chr6.1:1001979-1001998 | None:intergenic | 55.0% |
| ! | GGTTGAGGAGGTGCATTAGG+GGG | - | chr6.1:1001976-1001995 | None:intergenic | 55.0% |
| AGCCCCACTAGAACCTTGCG+TGG | + | chr6.1:999087-999106 | MS.gene82833:intron | 60.0% | |
| AGGGAGGGTGAGGCTCATTG+GGG | + | chr6.1:998674-998693 | MS.gene82833:intron | 60.0% | |
| CAGCAGCCACATCCTCAACC+AGG | + | chr6.1:1002147-1002166 | MS.gene82833:CDS | 60.0% | |
| CGCTCACAATAGCTGGGGTG+TGG | + | chr6.1:998083-998102 | MS.gene82833:intron | 60.0% | |
| CTAGGGAGGGTGAGGCTCAT+TGG | + | chr6.1:998672-998691 | MS.gene82833:intron | 60.0% | |
| CTCGCACCAGGTCTACTCGA+TGG | - | chr6.1:1002438-1002457 | None:intergenic | 60.0% | |
| GAAGGTTGAGGAGGTCCGCT+GGG | - | chr6.1:1002375-1002394 | None:intergenic | 60.0% | |
| GAATGCGGTGGCTGTTGTGG+AGG | - | chr6.1:1002240-1002259 | None:intergenic | 60.0% | |
| GCACCAGGTCTACTCGATGG+TGG | - | chr6.1:1002435-1002454 | None:intergenic | 60.0% | |
| GCAGCCACATCCTCAACCAG+GGG | + | chr6.1:1002149-1002168 | MS.gene82833:CDS | 60.0% | |
| GGAACCCTGTTACCAGCTCC+AGG | - | chr6.1:1002666-1002685 | None:intergenic | 60.0% | |
| TGTGGAGGTAGATGAGGCGG+TGG | - | chr6.1:1002225-1002244 | None:intergenic | 60.0% | |
| TGTTGAGGGGGAGGTTGAGG+AGG | - | chr6.1:1001988-1002007 | None:intergenic | 60.0% | |
| ! | AGATGGTGGCTGGCGGAGAT+TGG | - | chr6.1:1002346-1002365 | None:intergenic | 60.0% |
| ! | GATGGTGGCTGGCGGAGATT+GGG | - | chr6.1:1002345-1002364 | None:intergenic | 60.0% |
| ! | GCGGCTTCCAGTGGTGGAAA+CGG | + | chr6.1:1002561-1002580 | MS.gene82833:CDS | 60.0% |
| ! | GGTTCAGGTTCTCCTGGAGC+TGG | + | chr6.1:1002651-1002670 | MS.gene82833:CDS | 60.0% |
| !! | GTTGGTGGTTCTGACCGACC+TGG | + | chr6.1:998153-998172 | MS.gene82833:intron | 60.0% |
| AACGCTTCGGCGGCTTCCAG+TGG | + | chr6.1:1002552-1002571 | MS.gene82833:CDS | 65.0% | |
| CCACCATCTCAGCCACCCAG+CGG | + | chr6.1:1002357-1002376 | MS.gene82833:CDS | 65.0% | |
| GGAAGGTTGAGGAGGTCCGC+TGG | - | chr6.1:1002376-1002395 | None:intergenic | 65.0% | |
| GGGAGGGTGAGGCTCATTGG+GGG | + | chr6.1:998675-998694 | MS.gene82833:intron | 65.0% | |
| GGTGCCCCTGGTTGAGGATG+TGG | - | chr6.1:1002156-1002175 | None:intergenic | 65.0% | |
| ! | CTGGAAGCCGCCGAAGCGTT+AGG | - | chr6.1:1002552-1002571 | None:intergenic | 65.0% |
| ! | GTGGCTGAGATGGTGGCTGG+CGG | - | chr6.1:1002353-1002372 | None:intergenic | 65.0% |
| ! | GTGGGAGTACGCGGGCAGTA+GGG | - | chr6.1:1002599-1002618 | None:intergenic | 65.0% |
| ! | TGGGTGGCTGAGATGGTGGC+TGG | - | chr6.1:1002356-1002375 | None:intergenic | 65.0% |
| ! | TGTGGGAGTACGCGGGCAGT+AGG | - | chr6.1:1002600-1002619 | None:intergenic | 65.0% |
| !! | TGTTGATGCGGAGGTGCCCC+TGG | - | chr6.1:1002168-1002187 | None:intergenic | 65.0% |
| ACGCGGGCAGTAGGGAGCTG+TGG | - | chr6.1:1002591-1002610 | None:intergenic | 70.0% | |
| CCGCTGGGTGGCTGAGATGG+TGG | - | chr6.1:1002360-1002379 | None:intergenic | 70.0% | |
| CGCGGGCAGTAGGGAGCTGT+GGG | - | chr6.1:1002590-1002609 | None:intergenic | 70.0% | |
| GCTTCGGCGGCTTCCAGTGG+TGG | + | chr6.1:1002555-1002574 | MS.gene82833:CDS | 70.0% | |
| GGTCCGCTGGGTGGCTGAGA+TGG | - | chr6.1:1002363-1002382 | None:intergenic | 70.0% | |
| GGTGGCTGGCGGAGATTGGG+AGG | - | chr6.1:1002342-1002361 | None:intergenic | 70.0% | |
| GGTTGAGGAGGTCCGCTGGG+TGG | - | chr6.1:1002372-1002391 | None:intergenic | 70.0% | |
| !! | TGCGGAGGTGCCCCTGGTTG+AGG | - | chr6.1:1002162-1002181 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 996971 | 1002863 | 996971 | ID=MS.gene82833 |
| chr6.1 | mRNA | 996971 | 1002863 | 996971 | ID=MS.gene82833.t1;Parent=MS.gene82833 |
| chr6.1 | exon | 996971 | 997252 | 996971 | ID=MS.gene82833.t1.exon1;Parent=MS.gene82833.t1 |
| chr6.1 | CDS | 996971 | 997252 | 996971 | ID=cds.MS.gene82833.t1;Parent=MS.gene82833.t1 |
| chr6.1 | exon | 1000088 | 1000366 | 1000088 | ID=MS.gene82833.t1.exon2;Parent=MS.gene82833.t1 |
| chr6.1 | CDS | 1000088 | 1000366 | 1000088 | ID=cds.MS.gene82833.t1;Parent=MS.gene82833.t1 |
| chr6.1 | exon | 1001742 | 1002863 | 1001742 | ID=MS.gene82833.t1.exon3;Parent=MS.gene82833.t1 |
| chr6.1 | CDS | 1001742 | 1002863 | 1001742 | ID=cds.MS.gene82833.t1;Parent=MS.gene82833.t1 |
| Gene Sequence |
| Protein sequence |
