Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83054.t1 | KEH40633.1 | 98.9 | 615 | 6 | 1 | 1 | 614 | 1 | 615 | 0.00E+00 | 1190.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83054.t1 | Q8LF21 | 84.9 | 615 | 91 | 2 | 1 | 614 | 1 | 614 | 2.9e-305 | 1048.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83054.t1 | A0A072VGR4 | 98.9 | 615 | 6 | 1 | 1 | 614 | 1 | 615 | 0.0e+00 | 1190.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene035805 | MS.gene83054 | PPI |
| MS.gene83054 | MS.gene064542 | PPI |
| MS.gene83054 | MS.gene73119 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83054.t1 | MTR_1g032550 | 99.024 | 615 | 5 | 1 | 1 | 614 | 1 | 615 | 0.0 | 1254 |
| MS.gene83054.t1 | MTR_8g105580 | 89.465 | 617 | 61 | 3 | 1 | 614 | 1 | 616 | 0.0 | 1150 |
| MS.gene83054.t1 | MTR_8g105580 | 89.583 | 576 | 56 | 3 | 1 | 573 | 1 | 575 | 0.0 | 1075 |
| MS.gene83054.t1 | MTR_8g009510 | 74.331 | 635 | 141 | 5 | 1 | 613 | 1 | 635 | 0.0 | 966 |
| MS.gene83054.t1 | MTR_7g451010 | 75.606 | 619 | 141 | 3 | 1 | 613 | 1 | 615 | 0.0 | 961 |
| MS.gene83054.t1 | MTR_4g098920 | 69.821 | 613 | 174 | 4 | 4 | 613 | 1 | 605 | 0.0 | 914 |
| MS.gene83054.t1 | MTR_8g099550 | 67.537 | 613 | 191 | 4 | 4 | 613 | 1 | 608 | 0.0 | 891 |
| MS.gene83054.t1 | MTR_8g027675 | 67.863 | 613 | 188 | 3 | 4 | 613 | 1 | 607 | 0.0 | 888 |
| MS.gene83054.t1 | MTR_5g009150 | 67.101 | 614 | 193 | 4 | 4 | 613 | 1 | 609 | 0.0 | 886 |
| MS.gene83054.t1 | MTR_8g009510 | 74.194 | 527 | 120 | 3 | 103 | 613 | 2 | 528 | 0.0 | 805 |
| MS.gene83054.t1 | MTR_2g009690 | 37.120 | 493 | 290 | 6 | 5 | 487 | 22 | 504 | 1.60e-93 | 306 |
| MS.gene83054.t1 | MTR_4g093750 | 37.120 | 493 | 290 | 6 | 5 | 487 | 13 | 495 | 1.89e-90 | 295 |
| MS.gene83054.t1 | MTR_4g093750 | 37.045 | 494 | 291 | 6 | 5 | 487 | 13 | 497 | 2.09e-89 | 293 |
| MS.gene83054.t1 | MTR_4g030140 | 32.617 | 512 | 311 | 9 | 1 | 492 | 1 | 498 | 1.03e-69 | 243 |
| MS.gene83054.t1 | MTR_4g134680 | 30.920 | 511 | 324 | 9 | 1 | 495 | 1 | 498 | 8.36e-68 | 235 |
| MS.gene83054.t1 | MTR_4g134680 | 31.102 | 508 | 321 | 9 | 1 | 492 | 1 | 495 | 2.28e-67 | 235 |
| MS.gene83054.t1 | MTR_4g134680 | 31.102 | 508 | 321 | 9 | 1 | 492 | 1 | 495 | 9.57e-67 | 234 |
| MS.gene83054.t1 | MTR_4g134680 | 40.404 | 198 | 118 | 0 | 295 | 492 | 1 | 198 | 7.64e-42 | 160 |
| MS.gene83054.t1 | MTR_8g087770 | 35.816 | 282 | 162 | 6 | 35 | 310 | 68 | 336 | 1.42e-34 | 139 |
| MS.gene83054.t1 | MTR_8g087750 | 35.034 | 294 | 168 | 8 | 35 | 320 | 71 | 349 | 1.66e-33 | 136 |
| MS.gene83054.t1 | MTR_8g463270 | 26.136 | 352 | 228 | 9 | 12 | 341 | 31 | 372 | 1.01e-17 | 87.8 |
| MS.gene83054.t1 | MTR_4g022340 | 26.207 | 290 | 159 | 9 | 38 | 302 | 32 | 291 | 1.74e-13 | 72.0 |
| MS.gene83054.t1 | MTR_4g094300 | 27.273 | 187 | 127 | 4 | 36 | 214 | 41 | 226 | 3.43e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83054.t1 | AT1G14830 | 84.878 | 615 | 91 | 2 | 1 | 614 | 1 | 614 | 0.0 | 1101 |
| MS.gene83054.t1 | AT3G60190 | 76.045 | 622 | 140 | 3 | 1 | 613 | 1 | 622 | 0.0 | 1008 |
| MS.gene83054.t1 | AT2G44590 | 73.127 | 614 | 157 | 3 | 4 | 613 | 1 | 610 | 0.0 | 954 |
| MS.gene83054.t1 | AT2G44590 | 70.358 | 614 | 157 | 4 | 4 | 613 | 1 | 593 | 0.0 | 910 |
| MS.gene83054.t1 | AT2G44590 | 70.244 | 615 | 157 | 5 | 4 | 613 | 1 | 594 | 0.0 | 907 |
| MS.gene83054.t1 | AT3G61760 | 68.241 | 614 | 185 | 6 | 4 | 613 | 1 | 608 | 0.0 | 894 |
| MS.gene83054.t1 | AT5G42080 | 66.938 | 614 | 193 | 5 | 4 | 613 | 1 | 608 | 0.0 | 874 |
| MS.gene83054.t1 | AT5G42080 | 66.938 | 614 | 193 | 5 | 4 | 613 | 1 | 608 | 0.0 | 874 |
| MS.gene83054.t1 | AT5G42080 | 66.287 | 614 | 191 | 6 | 4 | 613 | 1 | 602 | 0.0 | 858 |
| MS.gene83054.t1 | AT3G61760 | 69.338 | 574 | 166 | 6 | 4 | 573 | 1 | 568 | 0.0 | 845 |
| MS.gene83054.t1 | AT3G61760 | 72.748 | 444 | 118 | 3 | 4 | 444 | 1 | 444 | 0.0 | 700 |
| MS.gene83054.t1 | AT5G42080 | 73.660 | 429 | 110 | 2 | 4 | 429 | 1 | 429 | 0.0 | 678 |
| MS.gene83054.t1 | AT2G14120 | 38.277 | 499 | 282 | 9 | 5 | 487 | 19 | 507 | 9.72e-95 | 307 |
| MS.gene83054.t1 | AT2G14120 | 38.277 | 499 | 282 | 9 | 5 | 487 | 19 | 507 | 1.85e-94 | 307 |
| MS.gene83054.t1 | AT2G14120 | 38.277 | 499 | 282 | 9 | 5 | 487 | 19 | 507 | 2.03e-94 | 307 |
| MS.gene83054.t1 | AT2G14120 | 36.364 | 528 | 281 | 10 | 5 | 487 | 19 | 536 | 3.79e-90 | 296 |
| MS.gene83054.t1 | AT4G33650 | 37.022 | 497 | 290 | 8 | 5 | 487 | 35 | 522 | 2.32e-89 | 294 |
| MS.gene83054.t1 | AT4G33650 | 37.022 | 497 | 290 | 8 | 5 | 487 | 35 | 522 | 2.36e-89 | 294 |
| MS.gene83054.t1 | AT1G10290 | 31.115 | 511 | 317 | 10 | 1 | 492 | 1 | 495 | 6.52e-66 | 232 |
| MS.gene83054.t1 | AT1G59610 | 32.553 | 470 | 287 | 10 | 38 | 492 | 41 | 495 | 9.65e-65 | 229 |
| MS.gene83054.t1 | AT1G60500 | 25.202 | 619 | 402 | 18 | 35 | 611 | 65 | 664 | 1.17e-40 | 157 |
| MS.gene83054.t1 | AT1G60530 | 42.703 | 185 | 105 | 1 | 35 | 219 | 62 | 245 | 1.22e-39 | 147 |
| MS.gene83054.t1 | AT1G53140 | 26.136 | 352 | 220 | 11 | 12 | 334 | 47 | 387 | 4.11e-18 | 89.0 |
Find 154 sgRNAs with CRISPR-Local
Find 423 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCATTCGACAAAGTATTTA+AGG | 0.164383 | 1.4:-17116872 | MS.gene83054:CDS |
| TGGACATCTCGCACATAAAA+TGG | 0.174772 | 1.4:-17117286 | MS.gene83054:CDS |
| AGAAAGAGATACACTGATTT+TGG | 0.206059 | 1.4:-17120559 | MS.gene83054:intron |
| CCAGGTGGGGACAAAATTTA+TGG | 0.231988 | 1.4:-17116639 | MS.gene83054:CDS |
| AGAGATTACAATTAGCTAAA+AGG | 0.247163 | 1.4:-17114867 | MS.gene83054:CDS |
| GTTGACAAAACTTGATCTTA+TGG | 0.256758 | 1.4:-17117558 | MS.gene83054:CDS |
| GAGTATTCCGATTTGGGTTC+TGG | 0.260981 | 1.4:+17115750 | None:intergenic |
| TTCTGGAAGGAAAGCATTAC+AGG | 0.281257 | 1.4:-17117425 | MS.gene83054:CDS |
| AGGCCTATAGCTGTGGATTC+AGG | 0.281307 | 1.4:-17117022 | MS.gene83054:CDS |
| GATAATCACCTCAGGAAAAT+TGG | 0.281779 | 1.4:-17115701 | MS.gene83054:intron |
| GATGAAACAGATCGTATAAC+TGG | 0.286363 | 1.4:-17119514 | MS.gene83054:CDS |
| AAATCAGTGTATCTCTTTCT+AGG | 0.291241 | 1.4:+17120562 | None:intergenic |
| CAACGTGCATGCACTGTCTT+AGG | 0.299919 | 1.4:-17121550 | MS.gene83054:CDS |
| ATGTGCGAGATGTCCATATT+CGG | 0.315615 | 1.4:+17117293 | None:intergenic |
| GATTAGGAGTATTCCGATTT+GGG | 0.316614 | 1.4:+17115744 | None:intergenic |
| GGATTAGGAGTATTCCGATT+TGG | 0.322268 | 1.4:+17115743 | None:intergenic |
| TTTGAGACGAGCCCCGAATA+TGG | 0.325981 | 1.4:-17117306 | MS.gene83054:CDS |
| GAAAATGAATACCAGAGTTC+AGG | 0.326748 | 1.4:-17121360 | MS.gene83054:intron |
| CATGATTATTGCTCGCAAAA+AGG | 0.327150 | 1.4:-17117340 | MS.gene83054:CDS |
| CACAGCTGCAAACGATTCTT+TGG | 0.329985 | 1.4:-17115885 | MS.gene83054:CDS |
| TGTGCGAGATGTCCATATTC+GGG | 0.342413 | 1.4:+17117294 | None:intergenic |
| GCAGCCTAACTGCATTATAT+TGG | 0.342764 | 1.4:-17117857 | MS.gene83054:intron |
| AAACTTGATCTTATGGATAA+AGG | 0.363059 | 1.4:-17117551 | MS.gene83054:CDS |
| AGTCACCCGGCTAGTTGATA+TGG | 0.364744 | 1.4:-17115834 | MS.gene83054:CDS |
| TCTCTAAAATAGTGTATAGT+TGG | 0.368054 | 1.4:+17116902 | None:intergenic |
| GAGGTGAGGGTTTGTCACTC+TGG | 0.370189 | 1.4:-17121519 | MS.gene83054:CDS |
| GTTTCAGGTGAAAGAACATT+TGG | 0.372975 | 1.4:-17117584 | MS.gene83054:intron |
| GGATGAAGATCCTGCACTTA+TGG | 0.374820 | 1.4:-17114893 | MS.gene83054:CDS |
| ATCTGTGTAGTTGTCCAGAT+TGG | 0.382369 | 1.4:+17115721 | None:intergenic |
| CATCTGAAGTGGCAATATCT+TGG | 0.392120 | 1.4:+17117818 | None:intergenic |
| GGCCTATAGCTGTGGATTCA+GGG | 0.395254 | 1.4:-17117021 | MS.gene83054:CDS |
| TTAACCCTCATAGATCTTCC+TGG | 0.397388 | 1.4:-17118471 | MS.gene83054:CDS |
| TTCCGATTTGGGTTCTGGTT+CGG | 0.403422 | 1.4:+17115755 | None:intergenic |
| TGACAATGAACCACAGCCTT+TGG | 0.407001 | 1.4:+17115227 | None:intergenic |
| AATATCTTGAACAATACTTT+CGG | 0.409883 | 1.4:+17118311 | None:intergenic |
| GAATGTATGCTGAGTTGAAT+TGG | 0.412745 | 1.4:+17119466 | None:intergenic |
| AGCATCTGGAGGTTGTCATT+AGG | 0.412952 | 1.4:-17117120 | MS.gene83054:CDS |
| CATCTGCTTTCAGGTCCACC+TGG | 0.416349 | 1.4:-17116159 | MS.gene83054:intron |
| TTTATTAAGGCAATGATACT+AGG | 0.420159 | 1.4:+17117088 | None:intergenic |
| GTGGCAATATCTTGGTTTGC+AGG | 0.420803 | 1.4:+17117826 | None:intergenic |
| TGTCGCCGTCGTTGGTGGAC+AGG | 0.426923 | 1.4:-17121482 | MS.gene83054:intron |
| CTTCCTTCTGTCGCCGTCGT+TGG | 0.429017 | 1.4:-17121490 | MS.gene83054:CDS |
| GAATACCTCCGATAGAAGTT+TGG | 0.429034 | 1.4:+17117248 | None:intergenic |
| TAGTTGTCCAGATTGGGATT+AGG | 0.431278 | 1.4:+17115728 | None:intergenic |
| CAGCTTCTGTAACGACTCTC+TGG | 0.443269 | 1.4:+17116544 | None:intergenic |
| AATGCAGAGTTGGACCGTAT+TGG | 0.443297 | 1.4:-17117046 | MS.gene83054:CDS |
| TCTGTGTAGTTGTCCAGATT+GGG | 0.445605 | 1.4:+17115722 | None:intergenic |
| CCTTCTGTCGCCGTCGTTGG+TGG | 0.445978 | 1.4:-17121487 | MS.gene83054:CDS |
| CAGCTATAGGCCTGCCAATA+CGG | 0.450058 | 1.4:+17117032 | None:intergenic |
| ACCCCTGAATCCACAGCTAT+AGG | 0.458697 | 1.4:+17117019 | None:intergenic |
| TCAGTGTTAGAGAGTGTTGT+TGG | 0.460422 | 1.4:-17121330 | MS.gene83054:CDS |
| CAAAGAATCGTTTGCAGCTG+TGG | 0.470291 | 1.4:+17115886 | None:intergenic |
| TGCAAAAGAAGTTGATCCCT+CGG | 0.471395 | 1.4:-17117785 | MS.gene83054:CDS |
| TGTCCCATGCAGCTGCTGTA+AGG | 0.471759 | 1.4:-17119549 | MS.gene83054:intron |
| GCATCCACAGAGGCATCAGC+TGG | 0.472043 | 1.4:+17116441 | None:intergenic |
| ATGGCATGCAGGAATTGAAA+AGG | 0.472466 | 1.4:-17115934 | MS.gene83054:intron |
| AGGTGAGGGTTTGTCACTCT+GGG | 0.472627 | 1.4:-17121518 | MS.gene83054:CDS |
| ATGGAAAGGTGTCGATCAAA+GGG | 0.473568 | 1.4:+17116576 | None:intergenic |
| AACCGAACCAGAACCCAAAT+CGG | 0.474926 | 1.4:-17115757 | MS.gene83054:CDS |
| GAATACTCCTAATCCCAATC+TGG | 0.476757 | 1.4:-17115735 | MS.gene83054:CDS |
| CTCTGCATTAAGCTCGTCAA+TGG | 0.479963 | 1.4:+17117060 | None:intergenic |
| GTTAGAGAGTGTTGTTGGAA+GGG | 0.480067 | 1.4:-17121325 | MS.gene83054:CDS |
| CCATGCAGCTGCTGTAAGGC+AGG | 0.480175 | 1.4:-17119545 | MS.gene83054:intron |
| TTGAATTGTACAAGCAAGCT+AGG | 0.482042 | 1.4:-17114843 | MS.gene83054:CDS |
| AGTCTTCTGTACCCTTGCTC+TGG | 0.492384 | 1.4:+17116495 | None:intergenic |
| AAAATGAATACCAGAGTTCA+GGG | 0.498338 | 1.4:-17121359 | MS.gene83054:intron |
| CTCAGCATACATTCTCCAAA+TGG | 0.498414 | 1.4:-17119457 | MS.gene83054:intron |
| ACGACATTGATTCAGTGGCT+TGG | 0.499384 | 1.4:-17114819 | MS.gene83054:CDS |
| ATTACAGGCTGCAGCATCCA+TGG | 0.499397 | 1.4:-17117410 | MS.gene83054:CDS |
| CAACTACACAAGACAGATGA+TGG | 0.499479 | 1.4:-17120613 | MS.gene83054:CDS |
| CTCTAAAATAGTGTATAGTT+GGG | 0.504335 | 1.4:+17116903 | None:intergenic |
| TGCACTGTCTTAGGTGATCA+TGG | 0.507165 | 1.4:-17121541 | MS.gene83054:CDS |
| AATTGGAATTTCAGACGTCC+AGG | 0.509545 | 1.4:-17116657 | MS.gene83054:intron |
| GGACATCTCGCACATAAAAT+GGG | 0.510235 | 1.4:-17117285 | MS.gene83054:CDS |
| TATGGAAAGGTGTCGATCAA+AGG | 0.510999 | 1.4:+17116575 | None:intergenic |
| CTGTCTTCCTACTTTCATCT+CGG | 0.512216 | 1.4:+17115855 | None:intergenic |
| GTCACAGATCATGTTGATAT+AGG | 0.512282 | 1.4:+17115268 | None:intergenic |
| ATCTTGGTTTGCAGGAGAGA+TGG | 0.513495 | 1.4:+17117834 | None:intergenic |
| TGTTAGAGAGTGTTGTTGGA+AGG | 0.515328 | 1.4:-17121326 | MS.gene83054:CDS |
| TCAATCCAGGAAGATCTATG+AGG | 0.519110 | 1.4:+17118466 | None:intergenic |
| CAGAGTTGGACCGTATTGGC+AGG | 0.519626 | 1.4:-17117042 | MS.gene83054:CDS |
| ATGGCCAATATAATGCAGTT+AGG | 0.526957 | 1.4:+17117853 | None:intergenic |
| TTGCTCTGGAGCAATCAGAT+GGG | 0.530480 | 1.4:+17116509 | None:intergenic |
| TTAGGTGATCATGGAGGTGA+GGG | 0.530590 | 1.4:-17121532 | MS.gene83054:CDS |
| GCGACTATGACGAGTTTGAT+CGG | 0.534919 | 1.4:-17121589 | MS.gene83054:CDS |
| CTTGCTCTGGAGCAATCAGA+TGG | 0.535297 | 1.4:+17116508 | None:intergenic |
| TGTTCAAGTTGGGAGAAAAG+AGG | 0.536836 | 1.4:-17115165 | MS.gene83054:intron |
| TGACGAGCTTAATGCAGAGT+TGG | 0.536861 | 1.4:-17117056 | MS.gene83054:CDS |
| ATATCTTGCCAAACTTCTAT+CGG | 0.541795 | 1.4:-17117256 | MS.gene83054:CDS |
| TTTGAGAAATTATACATCAA+CGG | 0.547445 | 1.4:+17117520 | None:intergenic |
| GCACGAGTTCCTTTAAAACC+AGG | 0.547539 | 1.4:+17116141 | None:intergenic |
| TAGACTCCATATCAACTAGC+CGG | 0.548087 | 1.4:+17115828 | None:intergenic |
| TGTTCAAGATATTGAAAACA+TGG | 0.550683 | 1.4:-17118301 | MS.gene83054:CDS |
| CTTAGGTGATCATGGAGGTG+AGG | 0.555541 | 1.4:-17121533 | MS.gene83054:CDS |
| AAATTCTATACCAAAGGCTG+TGG | 0.556115 | 1.4:-17115237 | MS.gene83054:CDS |
| ACACAAGACAGATGATGGAC+AGG | 0.556728 | 1.4:-17120608 | MS.gene83054:CDS |
| ACAGCAACCTTTGTCAATCC+AGG | 0.557663 | 1.4:+17118453 | None:intergenic |
| CATCTGATTGCTCCAGAGCA+AGG | 0.558965 | 1.4:-17116507 | MS.gene83054:CDS |
| GCAAAAGAAGTTGATCCCTC+GGG | 0.563439 | 1.4:-17117784 | MS.gene83054:intron |
| TGCTCTGGAGCAATCAGATG+GGG | 0.565244 | 1.4:+17116510 | None:intergenic |
| TTTAAAGGAACTCGTGCGGA+AGG | 0.566532 | 1.4:-17116135 | MS.gene83054:CDS |
| TATTAATATCAGCTTGTGAA+CGG | 0.567091 | 1.4:+17117373 | None:intergenic |
| GGGTACAGAAGACTTATTGA+AGG | 0.567761 | 1.4:-17116486 | MS.gene83054:CDS |
| CGGTTAACAATTCCGACCCA+TGG | 0.572778 | 1.4:+17117393 | None:intergenic |
| AAAGATTCCGAGATGAAAGT+AGG | 0.576433 | 1.4:-17115862 | MS.gene83054:CDS |
| GAATGCAGAAAGAGCAACTC+GGG | 0.576605 | 1.4:-17114924 | MS.gene83054:intron |
| GCCTATAGCTGTGGATTCAG+GGG | 0.577007 | 1.4:-17117020 | MS.gene83054:intron |
| CATCCACAGAGGCATCAGCT+GGG | 0.579787 | 1.4:+17116442 | None:intergenic |
| TGGAGGTTGTCATTAGGCAG+CGG | 0.581630 | 1.4:-17117114 | MS.gene83054:CDS |
| CCACCAACGACGGCGACAGA+AGG | 0.582012 | 1.4:+17121487 | None:intergenic |
| GGATGTTTAAGCTATTTCAA+AGG | 0.586530 | 1.4:-17116465 | MS.gene83054:CDS |
| ATCTGATTGCTCCAGAGCAA+GGG | 0.590187 | 1.4:-17116506 | MS.gene83054:CDS |
| AGACTCCATATCAACTAGCC+GGG | 0.593444 | 1.4:+17115829 | None:intergenic |
| GAATTTCAGACGTCCAGGTG+GGG | 0.596068 | 1.4:-17116652 | MS.gene83054:intron |
| TTGTGTAGTTGCAACACTAA+CGG | 0.596468 | 1.4:+17120625 | None:intergenic |
| TGAGGGTTTGTCACTCTGGG+AGG | 0.600220 | 1.4:-17121515 | MS.gene83054:CDS |
| TTTAAGGAACACATCGATGG+AGG | 0.601915 | 1.4:-17116856 | MS.gene83054:CDS |
| AGAGCAACTCGGGAACATGT+TGG | 0.605190 | 1.4:-17114914 | MS.gene83054:CDS |
| TTACCTTCTCAATGTATGAA+CGG | 0.605457 | 1.4:+17118277 | None:intergenic |
| ACTACACAGATAATCACCTC+AGG | 0.605675 | 1.4:-17115709 | MS.gene83054:CDS |
| CAATCCAGGAAGATCTATGA+GGG | 0.606676 | 1.4:+17118467 | None:intergenic |
| AGATCTTCCTGGATTGACAA+AGG | 0.607657 | 1.4:-17118460 | MS.gene83054:CDS |
| TAGGGACGACATTGATTCAG+TGG | 0.608583 | 1.4:-17114824 | MS.gene83054:CDS |
| GGAATTTCAGACGTCCAGGT+GGG | 0.611153 | 1.4:-17116653 | MS.gene83054:intron |
| GGATTGACAAAGGTTGCTGT+AGG | 0.613001 | 1.4:-17118450 | MS.gene83054:intron |
| TTACAGGCTGCAGCATCCAT+GGG | 0.613390 | 1.4:-17117409 | MS.gene83054:CDS |
| AGGCCCAGCTGATGCCTCTG+TGG | 0.617848 | 1.4:-17116445 | MS.gene83054:CDS |
| GTGCGAGATGTCCATATTCG+GGG | 0.622379 | 1.4:+17117295 | None:intergenic |
| AGGCTGCAGCATCCATGGGT+CGG | 0.622567 | 1.4:-17117405 | MS.gene83054:CDS |
| TCTAGGTGCATGAAGAAACT+CGG | 0.623647 | 1.4:+17120579 | None:intergenic |
| TGAATTGTACAAGCAAGCTA+GGG | 0.625800 | 1.4:-17114842 | MS.gene83054:CDS |
| TATTGGCAGGCCTATAGCTG+TGG | 0.626365 | 1.4:-17117029 | MS.gene83054:CDS |
| TTTATCACTTCAGCATCTGG+AGG | 0.626629 | 1.4:-17117131 | MS.gene83054:intron |
| GTATTTAAGGAACACATCGA+TGG | 0.628943 | 1.4:-17116859 | MS.gene83054:CDS |
| TGGAATTTCAGACGTCCAGG+TGG | 0.632506 | 1.4:-17116654 | MS.gene83054:intron |
| TGAATCTTATAGGTTCTGGA+AGG | 0.633421 | 1.4:-17117438 | MS.gene83054:intron |
| GAAGGCAGTTGCAGCAACTG+AGG | 0.641418 | 1.4:-17116117 | MS.gene83054:intron |
| GGTCCGTTCATACATTGAGA+AGG | 0.645504 | 1.4:-17118280 | MS.gene83054:intron |
| TCTTGCCAAACTTCTATCGG+AGG | 0.646586 | 1.4:-17117253 | MS.gene83054:intron |
| TTAAGGAACACATCGATGGA+GGG | 0.650369 | 1.4:-17116855 | MS.gene83054:intron |
| AGAGTCGTTACAGAAGCTGA+TGG | 0.650380 | 1.4:-17116540 | MS.gene83054:CDS |
| ATGAAACAGATCGTATAACT+GGG | 0.654794 | 1.4:-17119513 | MS.gene83054:CDS |
| TGAATGCAGAAAGAGCAACT+CGG | 0.664340 | 1.4:-17114925 | MS.gene83054:intron |
| CGAGTTCCTTTAAAACCAGG+TGG | 0.665482 | 1.4:+17116144 | None:intergenic |
| TGAGACCTGTCCACCAACGA+CGG | 0.678507 | 1.4:+17121477 | None:intergenic |
| ATTTGCAAGGTATTGTCACA+CGG | 0.680058 | 1.4:-17120651 | MS.gene83054:intron |
| CTAAGACAGTGCATGCACGT+TGG | 0.682128 | 1.4:+17121551 | None:intergenic |
| AAAGTAGGAAGACAGTCACC+CGG | 0.692064 | 1.4:-17115847 | MS.gene83054:CDS |
| GGTTCATTGTCAAGTCAGAG+AGG | 0.726563 | 1.4:-17115216 | MS.gene83054:CDS |
| TGGAAAGGTGTCGATCAAAG+GGG | 0.730253 | 1.4:+17116577 | None:intergenic |
| TGCAAGGTATTGTCACACGG+AGG | 0.743524 | 1.4:-17120648 | MS.gene83054:intron |
| GAGGATTACAGCATCCACAG+AGG | 0.759003 | 1.4:+17116431 | None:intergenic |
| AATTACATACCAGATCCACG+TGG | 0.836409 | 1.4:+17121294 | None:intergenic |
| ACTGTCTTAGGTGATCATGG+AGG | 0.852828 | 1.4:-17121538 | MS.gene83054:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATCAAATATAGATTTAA+AGG | + | chr1.4:17116249-17116268 | None:intergenic | 10.0% |
| !! | AATTGAATTTAAAAATGAAA+GGG | + | chr1.4:17116469-17116488 | None:intergenic | 10.0% |
| !!! | AAAATCTCATTATTAATTTT+AGG | - | chr1.4:17121067-17121086 | MS.gene83054:intron | 10.0% |
| !!! | AATATAAATAGATTTTTGAT+GGG | - | chr1.4:17116149-17116168 | MS.gene83054:CDS | 10.0% |
| !!! | AATTATAAATGACAATTTTA+GGG | - | chr1.4:17115396-17115415 | MS.gene83054:intron | 10.0% |
| !!! | TTAAATATTTTCAATTTAGT+GGG | - | chr1.4:17121284-17121303 | MS.gene83054:intron | 10.0% |
| !!! | TTAATAATGAGATTTTAAAA+AGG | + | chr1.4:17121063-17121082 | None:intergenic | 10.0% |
| !!! | TTTAAATATTTTCAATTTAG+TGG | - | chr1.4:17121283-17121302 | MS.gene83054:intron | 10.0% |
| !! | AATATACTGTTATAACTTAA+TGG | - | chr1.4:17120452-17120471 | MS.gene83054:intron | 15.0% |
| !! | AGTTATTATAATAAGTTACT+AGG | - | chr1.4:17120844-17120863 | MS.gene83054:intron | 15.0% |
| !! | ATATAACTACTTACTTATAT+AGG | + | chr1.4:17115445-17115464 | None:intergenic | 15.0% |
| !! | ATATAAGTAAGTAGTTATAT+TGG | - | chr1.4:17115445-17115464 | MS.gene83054:intron | 15.0% |
| !! | CAATTGAATTTAAAAATGAA+AGG | + | chr1.4:17116470-17116489 | None:intergenic | 15.0% |
| !! | GTTATTATAATAAGTTACTA+GGG | - | chr1.4:17120845-17120864 | MS.gene83054:intron | 15.0% |
| !! | TAATGTAAATAAATACCATT+TGG | + | chr1.4:17116966-17116985 | None:intergenic | 15.0% |
| !! | TATTTATATTCAAGTATCTT+TGG | + | chr1.4:17116139-17116158 | None:intergenic | 15.0% |
| !!! | ATATAAATAGATTTTTGATG+GGG | - | chr1.4:17116150-17116169 | MS.gene83054:intron | 15.0% |
| !!! | ATTTTTAATAACTATTTGCA+AGG | - | chr1.4:17115741-17115760 | MS.gene83054:CDS | 15.0% |
| !!! | GAATATAAATAGATTTTTGA+TGG | - | chr1.4:17116148-17116167 | MS.gene83054:CDS | 15.0% |
| !!! | GAATTATAAATGACAATTTT+AGG | - | chr1.4:17115395-17115414 | MS.gene83054:intron | 15.0% |
| !!! | GTTTAAATATTTGTTATATG+CGG | - | chr1.4:17120013-17120032 | MS.gene83054:intron | 15.0% |
| !!! | TTTAAATATTTGTTATATGC+GGG | - | chr1.4:17120014-17120033 | MS.gene83054:intron | 15.0% |
| !! | AAAAGTAAAACTGGTAAAAA+TGG | + | chr1.4:17117037-17117056 | None:intergenic | 20.0% |
| !! | AAAATAGAAAAGTCTAACAT+GGG | - | chr1.4:17116073-17116092 | MS.gene83054:intron | 20.0% |
| !! | AACTAAATCAAAGCTATTAA+AGG | - | chr1.4:17118221-17118240 | MS.gene83054:intron | 20.0% |
| !! | AATATCTTGAACAATACTTT+CGG | + | chr1.4:17118097-17118116 | None:intergenic | 20.0% |
| !! | ACTTAAAAATTCTATACCAA+AGG | - | chr1.4:17121162-17121181 | MS.gene83054:intron | 20.0% |
| !! | AGATTTAAAGGAAATTTATG+TGG | + | chr1.4:17116237-17116256 | None:intergenic | 20.0% |
| !! | ATTTAAAGGAAATTTATGTG+GGG | + | chr1.4:17116235-17116254 | None:intergenic | 20.0% |
| !! | ATTTCTTGTGAAACATAAAA+TGG | - | chr1.4:17117821-17117840 | MS.gene83054:CDS | 20.0% |
| !! | CAAAAATATCCTTATATTGT+TGG | + | chr1.4:17117659-17117678 | None:intergenic | 20.0% |
| !! | CAATTATCTAAAAGTTTAAG+TGG | + | chr1.4:17116591-17116610 | None:intergenic | 20.0% |
| !! | CTTGTTAATGAAAACATAAA+AGG | + | chr1.4:17118375-17118394 | None:intergenic | 20.0% |
| !! | GATTTAAAGGAAATTTATGT+GGG | + | chr1.4:17116236-17116255 | None:intergenic | 20.0% |
| !! | GGGATATAATGTATAAATAA+AGG | + | chr1.4:17116449-17116468 | None:intergenic | 20.0% |
| !! | TAAAATAGAAAAGTCTAACA+TGG | - | chr1.4:17116072-17116091 | MS.gene83054:intron | 20.0% |
| !! | TATTTACAATCTGTGAAAAT+CGG | - | chr1.4:17121015-17121034 | MS.gene83054:intron | 20.0% |
| !! | TGATATTTGATATACATAAC+TGG | - | chr1.4:17116262-17116281 | MS.gene83054:intron | 20.0% |
| !! | TTAATGAAAACATAAAAGGT+TGG | + | chr1.4:17118371-17118390 | None:intergenic | 20.0% |
| !! | TTTGAGAAATTATACATCAA+CGG | + | chr1.4:17118888-17118907 | None:intergenic | 20.0% |
| !!! | AAATTTGTTGTTATTTTGAG+AGG | - | chr1.4:17118014-17118033 | MS.gene83054:intron | 20.0% |
| !!! | AATTAAAGTTCTAGCAAAAT+AGG | + | chr1.4:17117869-17117888 | None:intergenic | 20.0% |
| !!! | AGAATTATCAATGAATTTTG+TGG | + | chr1.4:17120774-17120793 | None:intergenic | 20.0% |
| !!! | AGTTATTTTATTCTTGTTTC+AGG | - | chr1.4:17118806-17118825 | MS.gene83054:intron | 20.0% |
| !!! | ATCTAACAGTAGAATTTTTT+CGG | - | chr1.4:17120603-17120622 | MS.gene83054:CDS | 20.0% |
| !!! | ATTTAAAATATGATAGCTGT+AGG | - | chr1.4:17116176-17116195 | MS.gene83054:intron | 20.0% |
| !!! | CACTTAAACTTTTAGATAAT+TGG | - | chr1.4:17116589-17116608 | MS.gene83054:CDS | 20.0% |
| !!! | CATTTACGTAATATGTTTTT+GGG | - | chr1.4:17116740-17116759 | MS.gene83054:intron | 20.0% |
| !!! | CATTTTATGATTCTTATTTC+AGG | - | chr1.4:17121100-17121119 | MS.gene83054:intron | 20.0% |
| !!! | GCATATAAAAAGTTTTCAAT+TGG | - | chr1.4:17119731-17119750 | MS.gene83054:intron | 20.0% |
| !!! | GTCAATGGTTTTATTTATTA+AGG | + | chr1.4:17119333-17119352 | None:intergenic | 20.0% |
| !!! | TATATTGTGTGATTCATTTT+TGG | - | chr1.4:17115011-17115030 | MS.gene83054:intron | 20.0% |
| !!! | TATTTTGCTAGAACTTTAAT+TGG | - | chr1.4:17117868-17117887 | MS.gene83054:intron | 20.0% |
| !!! | TCATTTACGTAATATGTTTT+TGG | - | chr1.4:17116739-17116758 | MS.gene83054:intron | 20.0% |
| !!! | TGTCTTTTTTTTTTTTCCAT+AGG | - | chr1.4:17119479-17119498 | MS.gene83054:CDS | 20.0% |
| !!! | TTTTCCTTATATTCTAACAA+CGG | + | chr1.4:17117585-17117604 | None:intergenic | 20.0% |
| !!! | TTTTCTTAATTTGCTTTCTT+TGG | - | chr1.4:17117265-17117284 | MS.gene83054:CDS | 20.0% |
| ! | AAAAATACCTATTATGAGTG+TGG | - | chr1.4:17116288-17116307 | MS.gene83054:intron | 25.0% |
| ! | AAACTTGATCTTATGGATAA+AGG | - | chr1.4:17118854-17118873 | MS.gene83054:intron | 25.0% |
| ! | AACAAAACATAAGAGTTAAG+AGG | + | chr1.4:17119996-17120015 | None:intergenic | 25.0% |
| ! | AAGGTTAAAACAAAAATGTG+TGG | - | chr1.4:17121457-17121476 | MS.gene83054:intron | 25.0% |
| ! | AATATCATTTCAATGATGTG+TGG | - | chr1.4:17115695-17115714 | MS.gene83054:intron | 25.0% |
| ! | AATGATTGTTTACTTGAACA+TGG | + | chr1.4:17118290-17118309 | None:intergenic | 25.0% |
| ! | ACAATCGAAGACTAAAATAT+TGG | + | chr1.4:17115944-17115963 | None:intergenic | 25.0% |
| ! | ACGTATATTTGAAAACAAGA+TGG | + | chr1.4:17118408-17118427 | None:intergenic | 25.0% |
| ! | ACTTTAAATCGCTAAGTAAA+AGG | + | chr1.4:17117062-17117081 | None:intergenic | 25.0% |
| ! | AGAGATTACAATTAGCTAAA+AGG | - | chr1.4:17121538-17121557 | MS.gene83054:CDS | 25.0% |
| ! | CTTTAAATCGCTAAGTAAAA+GGG | + | chr1.4:17117061-17117080 | None:intergenic | 25.0% |
| ! | TAAAAGGGTAAAAGTAAAAC+TGG | + | chr1.4:17117046-17117065 | None:intergenic | 25.0% |
| ! | TAAATCAAAGCTATTAAAGG+AGG | - | chr1.4:17118224-17118243 | MS.gene83054:intron | 25.0% |
| ! | TAATCTAATGGTTACAACTA+CGG | + | chr1.4:17120133-17120152 | None:intergenic | 25.0% |
| ! | TAATTTCTCAAACAAAGTCA+TGG | - | chr1.4:17118896-17118915 | MS.gene83054:intron | 25.0% |
| ! | TATTAATATCAGCTTGTGAA+CGG | + | chr1.4:17119035-17119054 | None:intergenic | 25.0% |
| ! | TCTTATGTTCCAACAATATA+AGG | - | chr1.4:17117647-17117666 | MS.gene83054:intron | 25.0% |
| ! | TGTTATCATGTGAATCTTAT+AGG | - | chr1.4:17118957-17118976 | MS.gene83054:intron | 25.0% |
| ! | TGTTCAAGATATTGAAAACA+TGG | - | chr1.4:17118104-17118123 | MS.gene83054:intron | 25.0% |
| ! | TGTTCTCTTCTAAATATTGA+AGG | - | chr1.4:17117143-17117162 | MS.gene83054:intron | 25.0% |
| ! | TTTATTAAGGCAATGATACT+AGG | + | chr1.4:17119320-17119339 | None:intergenic | 25.0% |
| !! | ACATTTCTTTGTTGTCTATA+TGG | + | chr1.4:17116357-17116376 | None:intergenic | 25.0% |
| !! | AGACAACAAAGAAATGTTTT+TGG | - | chr1.4:17116360-17116379 | MS.gene83054:intron | 25.0% |
| !! | CTATCTTTTACTAGAAGAAT+GGG | + | chr1.4:17116643-17116662 | None:intergenic | 25.0% |
| !! | GTTACTATTCTTACTTGTTT+TGG | - | chr1.4:17120977-17120996 | MS.gene83054:intron | 25.0% |
| !! | TAGAAGATTGATTTCAACAA+TGG | + | chr1.4:17119423-17119442 | None:intergenic | 25.0% |
| !! | TCGATCAATTTTGTCTAATA+TGG | - | chr1.4:17120058-17120077 | MS.gene83054:intron | 25.0% |
| !!! | AATGAAAGTGTACTTTTACT+TGG | - | chr1.4:17117512-17117531 | MS.gene83054:intron | 25.0% |
| !!! | ATATTTTTGCAATCTTATCG+GGG | - | chr1.4:17117670-17117689 | MS.gene83054:intron | 25.0% |
| !!! | ATGAAAGTGTACTTTTACTT+GGG | - | chr1.4:17117513-17117532 | MS.gene83054:intron | 25.0% |
| !!! | ATTATTTTGCATGGTTTTGT+TGG | - | chr1.4:17117900-17117919 | MS.gene83054:intron | 25.0% |
| !!! | CTCTAAAATAGTGTATAGTT+GGG | + | chr1.4:17119505-17119524 | None:intergenic | 25.0% |
| !!! | GATATTTTTGCAATCTTATC+GGG | - | chr1.4:17117669-17117688 | MS.gene83054:intron | 25.0% |
| !!! | GCTATTTCATTTTTAAGTGT+TGG | + | chr1.4:17120500-17120519 | None:intergenic | 25.0% |
| !!! | GGATATTTTTGCAATCTTAT+CGG | - | chr1.4:17117668-17117687 | MS.gene83054:intron | 25.0% |
| !!! | TATTTTGAGTTTAAGTGTTG+TGG | - | chr1.4:17120796-17120815 | MS.gene83054:intron | 25.0% |
| !!! | TCTCTAAAATAGTGTATAGT+TGG | + | chr1.4:17119506-17119525 | None:intergenic | 25.0% |
| !!! | TGTTTTTCGACAAATGAAAA+TGG | - | chr1.4:17116488-17116507 | MS.gene83054:CDS | 25.0% |
| !!! | TTCATTTTTGGTAATGTATG+TGG | - | chr1.4:17115023-17115042 | MS.gene83054:intron | 25.0% |
| AAAAGGATAAGAGAAATCCA+AGG | + | chr1.4:17120200-17120219 | None:intergenic | 30.0% | |
| AAAATGAATACCAGAGTTCA+GGG | - | chr1.4:17115046-17115065 | MS.gene83054:intron | 30.0% | |
| AAATAATCGTAGTTGAGATG+AGG | - | chr1.4:17115350-17115369 | MS.gene83054:intron | 30.0% | |
| AAATCAGTGTATCTCTTTCT+AGG | + | chr1.4:17115846-17115865 | None:intergenic | 30.0% | |
| AACCAGATTATCAAGAAACA+TGG | + | chr1.4:17119706-17119725 | None:intergenic | 30.0% | |
| AAGAACATAATATCAGGTCA+TGG | + | chr1.4:17120943-17120962 | None:intergenic | 30.0% | |
| AATCTAATGGTTACAACTAC+GGG | + | chr1.4:17120132-17120151 | None:intergenic | 30.0% | |
| AATGCTAATTAAGCAAGCAA+CGG | + | chr1.4:17115139-17115158 | None:intergenic | 30.0% | |
| ACTAAGATAGATCACAATTG+GGG | - | chr1.4:17117411-17117430 | MS.gene83054:CDS | 30.0% | |
| AGCGTACAAGTAAATACTAA+AGG | + | chr1.4:17121396-17121415 | None:intergenic | 30.0% | |
| ATATCTTGCCAAACTTCTAT+CGG | - | chr1.4:17119149-17119168 | MS.gene83054:intron | 30.0% | |
| ATATGAGAAATTCTAACCAC+AGG | + | chr1.4:17121363-17121382 | None:intergenic | 30.0% | |
| ATGAAACAGATCGTATAACT+GGG | - | chr1.4:17116892-17116911 | MS.gene83054:CDS | 30.0% | |
| ATTATGTTCTTCATACCTAG+TGG | - | chr1.4:17120952-17120971 | MS.gene83054:intron | 30.0% | |
| ATTGCTCAAACTTGATATCA+AGG | + | chr1.4:17115232-17115251 | None:intergenic | 30.0% | |
| ATTTGTAAGAAGCTACTCTA+TGG | - | chr1.4:17117314-17117333 | MS.gene83054:CDS | 30.0% | |
| CAAACACATATGTAAGAGTT+TGG | + | chr1.4:17115569-17115588 | None:intergenic | 30.0% | |
| CAAGTCATTAGCTAATCTAA+TGG | + | chr1.4:17120145-17120164 | None:intergenic | 30.0% | |
| CACTAAGATAGATCACAATT+GGG | - | chr1.4:17117410-17117429 | MS.gene83054:CDS | 30.0% | |
| CATGATAACATGACTCAATT+TGG | + | chr1.4:17118947-17118966 | None:intergenic | 30.0% | |
| CCATTCTTCTAGTAAAAGAT+AGG | - | chr1.4:17116641-17116660 | MS.gene83054:CDS | 30.0% | |
| CTCTCATACAAATAAGATCT+TGG | - | chr1.4:17121430-17121449 | MS.gene83054:intron | 30.0% | |
| CTGAATCTTGAGTGAATTAA+GGG | + | chr1.4:17120411-17120430 | None:intergenic | 30.0% | |
| GAGTAGTACATAAGAAAGAA+AGG | + | chr1.4:17120901-17120920 | None:intergenic | 30.0% | |
| GATTTCTATGTGGAGAAAAA+AGG | + | chr1.4:17120217-17120236 | None:intergenic | 30.0% | |
| GGAATTGGCGTTATATAAAA+GGG | + | chr1.4:17119639-17119658 | None:intergenic | 30.0% | |
| GGTATGAAGAACATAATATC+AGG | + | chr1.4:17120949-17120968 | None:intergenic | 30.0% | |
| GTTGACAAAACTTGATCTTA+TGG | - | chr1.4:17118847-17118866 | MS.gene83054:intron | 30.0% | |
| TAAGAATAGTAACAACCACT+AGG | + | chr1.4:17120970-17120989 | None:intergenic | 30.0% | |
| TACTCTCTTATCTATAGATG+TGG | - | chr1.4:17120916-17120935 | MS.gene83054:intron | 30.0% | |
| TAGCTAATGACTTGATTGTT+TGG | - | chr1.4:17120151-17120170 | MS.gene83054:intron | 30.0% | |
| TAGTAGATGCCTTTATGATA+TGG | - | chr1.4:17115638-17115657 | MS.gene83054:intron | 30.0% | |
| TCACTAAGATAGATCACAAT+TGG | - | chr1.4:17117409-17117428 | MS.gene83054:CDS | 30.0% | |
| TCATACAAATAAGATCTTGG+TGG | - | chr1.4:17121433-17121452 | MS.gene83054:intron | 30.0% | |
| TCTAAACTTGAAATTCGATC+AGG | + | chr1.4:17118661-17118680 | None:intergenic | 30.0% | |
| TGAATCTTGAGTGAATTAAG+GGG | + | chr1.4:17120410-17120429 | None:intergenic | 30.0% | |
| TGTATGTTACTCAATCACAT+GGG | + | chr1.4:17119660-17119679 | None:intergenic | 30.0% | |
| TTACATACCACACTCATAAT+AGG | + | chr1.4:17116298-17116317 | None:intergenic | 30.0% | |
| TTACCTTCTCAATGTATGAA+CGG | + | chr1.4:17118131-17118150 | None:intergenic | 30.0% | |
| TTAGTATACTCCACTTAAAG+AGG | - | chr1.4:17118261-17118280 | MS.gene83054:intron | 30.0% | |
| TTCTTTGAACGTACTATCTT+CGG | + | chr1.4:17121330-17121349 | None:intergenic | 30.0% | |
| TTGATATCAAGTTTGAGCAA+TGG | - | chr1.4:17115231-17115250 | MS.gene83054:CDS | 30.0% | |
| TTGTATGTTACTCAATCACA+TGG | + | chr1.4:17119661-17119680 | None:intergenic | 30.0% | |
| TTTCAGTAATGATAAGCTTC+CGG | - | chr1.4:17115902-17115921 | MS.gene83054:CDS | 30.0% | |
| ! | AGCATTCGACAAAGTATTTA+AGG | - | chr1.4:17119533-17119552 | MS.gene83054:CDS | 30.0% |
| ! | ATCCATGTTTCTTGATAATC+TGG | - | chr1.4:17119701-17119720 | MS.gene83054:intron | 30.0% |
| ! | ATTTTCTTCACCTTCTTCTT+GGG | - | chr1.4:17117751-17117770 | MS.gene83054:intron | 30.0% |
| ! | CCTATCTTTTACTAGAAGAA+TGG | + | chr1.4:17116644-17116663 | None:intergenic | 30.0% |
| ! | CGATTTAAAGTAGCAATTAG+CGG | - | chr1.4:17117071-17117090 | MS.gene83054:CDS | 30.0% |
| ! | GCTGTAGTTGTTTCATATAT+TGG | - | chr1.4:17115478-17115497 | MS.gene83054:intron | 30.0% |
| ! | GGATGTTTAAGCTATTTCAA+AGG | - | chr1.4:17119940-17119959 | MS.gene83054:intron | 30.0% |
| ! | TCATCGGTCTAGTAAATTTT+GGG | + | chr1.4:17116387-17116406 | None:intergenic | 30.0% |
| ! | TTCATCGGTCTAGTAAATTT+TGG | + | chr1.4:17116388-17116407 | None:intergenic | 30.0% |
| ! | TTTTCCTTTCTTTCCTTTAC+CGG | - | chr1.4:17119249-17119268 | MS.gene83054:intron | 30.0% |
| ! | TTTTCGACAAATGAAAATGG+TGG | - | chr1.4:17116491-17116510 | MS.gene83054:CDS | 30.0% |
| ! | TTTTGACAATCAATTACCAG+CGG | - | chr1.4:17119792-17119811 | MS.gene83054:intron | 30.0% |
| !! | AATCGCTTTTATGTTCAAGT+TGG | - | chr1.4:17121229-17121248 | MS.gene83054:intron | 30.0% |
| !! | AGATAATGGAAATGCTTCAA+TGG | - | chr1.4:17116199-17116218 | MS.gene83054:intron | 30.0% |
| !! | AGTTGCATGATTATTTTGCA+TGG | - | chr1.4:17117891-17117910 | MS.gene83054:intron | 30.0% |
| !! | ATCGCTTTTATGTTCAAGTT+GGG | - | chr1.4:17121230-17121249 | MS.gene83054:intron | 30.0% |
| !! | CGATTATTTTATTCTCGTGT+TGG | + | chr1.4:17115339-17115358 | None:intergenic | 30.0% |
| !! | CTGAATAACTAAGTTTTGAC+TGG | - | chr1.4:17117197-17117216 | MS.gene83054:intron | 30.0% |
| !! | GTTTTAGGCAAGATTCATTT+TGG | - | chr1.4:17118775-17118794 | MS.gene83054:intron | 30.0% |
| !! | TGAAAGTGTACTTTTACTTG+GGG | - | chr1.4:17117514-17117533 | MS.gene83054:intron | 30.0% |
| !! | TTTGTTGTCTATATGGCTTT+TGG | + | chr1.4:17116350-17116369 | None:intergenic | 30.0% |
| !! | TTTTAGTCTTCGATTGTTGA+TGG | - | chr1.4:17115947-17115966 | MS.gene83054:intron | 30.0% |
| !!! | AATTTTGATTGCATCTGAAG+TGG | + | chr1.4:17118601-17118620 | None:intergenic | 30.0% |
| !!! | AGAAAGAGATACACTGATTT+TGG | - | chr1.4:17115846-17115865 | MS.gene83054:CDS | 30.0% |
| !!! | TCTGGACATTTTTTATGGAA+AGG | + | chr1.4:17119846-17119865 | None:intergenic | 30.0% |
| AAAGATTCCGAGATGAAAGT+AGG | - | chr1.4:17120543-17120562 | MS.gene83054:intron | 35.0% | |
| AAATAAAGGCGACTTTCTTG+TGG | + | chr1.4:17116435-17116454 | None:intergenic | 35.0% | |
| AAATTCTATACCAAAGGCTG+TGG | - | chr1.4:17121168-17121187 | MS.gene83054:intron | 35.0% | |
| AATGTACATCTACTTAGTGC+CGG | - | chr1.4:17120094-17120113 | MS.gene83054:intron | 35.0% | |
| AATTTATGCTTCGTACACAG+AGG | - | chr1.4:17118065-17118084 | MS.gene83054:intron | 35.0% | |
| AGTGGTTAAGAGAACATACA+TGG | + | chr1.4:17116573-17116592 | None:intergenic | 35.0% | |
| ATGATAATCCTCCTTTCATC+AGG | + | chr1.4:17116704-17116723 | None:intergenic | 35.0% | |
| ATGATAGCTGTAGGAGATAA+TGG | - | chr1.4:17116185-17116204 | MS.gene83054:intron | 35.0% | |
| ATGGCCAATATAATGCAGTT+AGG | + | chr1.4:17118555-17118574 | None:intergenic | 35.0% | |
| ATGTCATGATATTCTCGTCT+CGG | - | chr1.4:17117614-17117633 | MS.gene83054:intron | 35.0% | |
| ATTTATGCTTCGTACACAGA+GGG | - | chr1.4:17118066-17118085 | MS.gene83054:intron | 35.0% | |
| ATTTCAAAGTCCCTGATGAA+AGG | - | chr1.4:17116690-17116709 | MS.gene83054:intron | 35.0% | |
| CATGATTATTGCTCGCAAAA+AGG | - | chr1.4:17119065-17119084 | MS.gene83054:intron | 35.0% | |
| CATGTGAATCTTATAGGTTC+TGG | - | chr1.4:17118963-17118982 | MS.gene83054:intron | 35.0% | |
| CCTGAATCTTGAGTGAATTA+AGG | + | chr1.4:17120412-17120431 | None:intergenic | 35.0% | |
| CCTTAATTCACTCAAGATTC+AGG | - | chr1.4:17120409-17120428 | MS.gene83054:intron | 35.0% | |
| CGGAAAGATACCTTATCTTA+AGG | + | chr1.4:17116108-17116127 | None:intergenic | 35.0% | |
| CGTCGCAAATTATAGCAAAT+CGG | + | chr1.4:17116026-17116045 | None:intergenic | 35.0% | |
| CTAAGATAGATCACAATTGG+GGG | - | chr1.4:17117412-17117431 | MS.gene83054:CDS | 35.0% | |
| GAAAATGAATACCAGAGTTC+AGG | - | chr1.4:17115045-17115064 | MS.gene83054:intron | 35.0% | |
| GAAGAATGAAGAAGCTTCAT+CGG | + | chr1.4:17116403-17116422 | None:intergenic | 35.0% | |
| GAATCTTGCCTAAAACAGAA+AGG | + | chr1.4:17118771-17118790 | None:intergenic | 35.0% | |
| GACAGTAAACGATTTCTATG+TGG | + | chr1.4:17120227-17120246 | None:intergenic | 35.0% | |
| GAGTCCGTTGTTAGAATATA+AGG | - | chr1.4:17117578-17117597 | MS.gene83054:CDS | 35.0% | |
| GATAATCACCTCAGGAAAAT+TGG | - | chr1.4:17120704-17120723 | MS.gene83054:intron | 35.0% | |
| GATGAAACAGATCGTATAAC+TGG | - | chr1.4:17116891-17116910 | MS.gene83054:CDS | 35.0% | |
| GCAAAATAGGACATTGTCTA+TGG | + | chr1.4:17117856-17117875 | None:intergenic | 35.0% | |
| GCAACAGAAACCTTAAGATA+AGG | - | chr1.4:17116095-17116114 | MS.gene83054:intron | 35.0% | |
| GGGAATTGGCGTTATATAAA+AGG | + | chr1.4:17119640-17119659 | None:intergenic | 35.0% | |
| GGGGTAATGTCAACTTATAT+AGG | - | chr1.4:17117533-17117552 | MS.gene83054:intron | 35.0% | |
| GTATTTAAGGAACACATCGA+TGG | - | chr1.4:17119546-17119565 | MS.gene83054:intron | 35.0% | |
| GTCACAGATCATGTTGATAT+AGG | + | chr1.4:17121140-17121159 | None:intergenic | 35.0% | |
| GTCGCAAATTATAGCAAATC+GGG | + | chr1.4:17116025-17116044 | None:intergenic | 35.0% | |
| GTTATAACTTAATGGCATGC+AGG | - | chr1.4:17120460-17120479 | MS.gene83054:intron | 35.0% | |
| TAGATGCCTTTATGATATGG+TGG | - | chr1.4:17115641-17115660 | MS.gene83054:intron | 35.0% | |
| TCATGACCACCATATCATAA+AGG | + | chr1.4:17115650-17115669 | None:intergenic | 35.0% | |
| TCGAACAGATAAACGTTGAA+CGG | - | chr1.4:17117381-17117400 | MS.gene83054:CDS | 35.0% | |
| TGAATTGTACAAGCAAGCTA+GGG | - | chr1.4:17121563-17121582 | MS.gene83054:CDS | 35.0% | |
| TGATAATCCTCCTTTCATCA+GGG | + | chr1.4:17116703-17116722 | None:intergenic | 35.0% | |
| TTACTCAATCACATGGGAAT+TGG | + | chr1.4:17119654-17119673 | None:intergenic | 35.0% | |
| TTCGTCTATCGTCTTATGAA+GGG | + | chr1.4:17116990-17117009 | None:intergenic | 35.0% | |
| TTGAATTGTACAAGCAAGCT+AGG | - | chr1.4:17121562-17121581 | MS.gene83054:CDS | 35.0% | |
| TTGTGTAGTTGCAACACTAA+CGG | + | chr1.4:17115783-17115802 | None:intergenic | 35.0% | |
| TTTCGTCTATCGTCTTATGA+AGG | + | chr1.4:17116991-17117010 | None:intergenic | 35.0% | |
| ! | AAAGAAAATTAGAGTGCCTG+TGG | - | chr1.4:17121344-17121363 | MS.gene83054:CDS | 35.0% |
| ! | AAAGGTTGGTTACTTGAACA+AGG | + | chr1.4:17118357-17118376 | None:intergenic | 35.0% |
| ! | AATCTCTTTTCCATAAGTGC+AGG | + | chr1.4:17121525-17121544 | None:intergenic | 35.0% |
| ! | ACTTTTTGTCAGATATGAGG+AGG | - | chr1.4:17117166-17117185 | MS.gene83054:intron | 35.0% |
| ! | AGGACTTTTTGTCAGATATG+AGG | - | chr1.4:17117163-17117182 | MS.gene83054:intron | 35.0% |
| ! | CAAATAAGATCTTGGTGGTA+AGG | - | chr1.4:17121438-17121457 | MS.gene83054:intron | 35.0% |
| ! | CTTTTTGTCAGATATGAGGA+GGG | - | chr1.4:17117167-17117186 | MS.gene83054:intron | 35.0% |
| ! | GAATGTATGCTGAGTTGAAT+TGG | + | chr1.4:17116942-17116961 | None:intergenic | 35.0% |
| ! | GATTTTCTTCACCTTCTTCT+TGG | - | chr1.4:17117750-17117769 | MS.gene83054:intron | 35.0% |
| ! | GTTACTTACCAATTTTCCTG+AGG | + | chr1.4:17120715-17120734 | None:intergenic | 35.0% |
| ! | GTTTCAGGTGAAAGAACATT+TGG | - | chr1.4:17118821-17118840 | MS.gene83054:intron | 35.0% |
| ! | TCTCTTTGCCTTTCTGTTTT+AGG | - | chr1.4:17118760-17118779 | MS.gene83054:intron | 35.0% |
| ! | TTTTCTTCACCTTCTTCTTG+GGG | - | chr1.4:17117752-17117771 | MS.gene83054:intron | 35.0% |
| !! | ATTTGCAAGGTATTGTCACA+CGG | - | chr1.4:17115754-17115773 | MS.gene83054:CDS | 35.0% |
| !! | GATTAGGAGTATTCCGATTT+GGG | + | chr1.4:17120664-17120683 | None:intergenic | 35.0% |
| !! | GCTTTACTTTTCAACACCTT+CGG | + | chr1.4:17117097-17117116 | None:intergenic | 35.0% |
| !! | GTGAATTAAGGGGTCATTTT+AGG | + | chr1.4:17120400-17120419 | None:intergenic | 35.0% |
| !! | TGAATCTTATAGGTTCTGGA+AGG | - | chr1.4:17118967-17118986 | MS.gene83054:intron | 35.0% |
| !!! | ATTTCCCTCAAGTGCTTTTT+TGG | - | chr1.4:17119201-17119220 | MS.gene83054:intron | 35.0% |
| !!! | GACTCTCTGGACATTTTTTA+TGG | + | chr1.4:17119851-17119870 | None:intergenic | 35.0% |
| AACATGGTGTCCTCTTTAAG+TGG | + | chr1.4:17118274-17118293 | None:intergenic | 40.0% | |
| AATGCCGGTAAAGGAAAGAA+AGG | + | chr1.4:17119256-17119275 | None:intergenic | 40.0% | |
| AATTACATACCAGATCCACG+TGG | + | chr1.4:17115114-17115133 | None:intergenic | 40.0% | |
| AATTGGAATTTCAGACGTCC+AGG | - | chr1.4:17119748-17119767 | MS.gene83054:intron | 40.0% | |
| AATTTAGACTGCCTCACTTG+AGG | + | chr1.4:17117796-17117815 | None:intergenic | 40.0% | |
| ACAATCAAGTCAGTCAAGTG+TGG | - | chr1.4:17117468-17117487 | MS.gene83054:intron | 40.0% | |
| ACTACACAGATAATCACCTC+AGG | - | chr1.4:17120696-17120715 | MS.gene83054:intron | 40.0% | |
| ACTAGAAGAATGGGTCAAGA+AGG | + | chr1.4:17116634-17116653 | None:intergenic | 40.0% | |
| ACTGAAAAAGAGAAACCCCA+CGG | + | chr1.4:17117245-17117264 | None:intergenic | 40.0% | |
| AGATCTTCCTGGATTGACAA+AGG | - | chr1.4:17117945-17117964 | MS.gene83054:intron | 40.0% | |
| AGCAACAAAATTGCAGCACA+CGG | + | chr1.4:17115982-17116001 | None:intergenic | 40.0% | |
| AGGATAAGAGAAATCCAAGG+AGG | + | chr1.4:17120197-17120216 | None:intergenic | 40.0% | |
| ATAAGAGAAATCCAAGGAGG+AGG | + | chr1.4:17120194-17120213 | None:intergenic | 40.0% | |
| ATAGTGTATAGTTGGGCCTA+TGG | + | chr1.4:17119498-17119517 | None:intergenic | 40.0% | |
| ATCTGTGTAGTTGTCCAGAT+TGG | + | chr1.4:17120687-17120706 | None:intergenic | 40.0% | |
| ATGGCATGCAGGAATTGAAA+AGG | - | chr1.4:17120471-17120490 | MS.gene83054:intron | 40.0% | |
| CAACTACACAAGACAGATGA+TGG | - | chr1.4:17115792-17115811 | MS.gene83054:CDS | 40.0% | |
| CAATCAAGTCAGTCAAGTGT+GGG | - | chr1.4:17117469-17117488 | MS.gene83054:intron | 40.0% | |
| CAATCCAGGAAGATCTATGA+GGG | + | chr1.4:17117941-17117960 | None:intergenic | 40.0% | |
| CTCAAGATTCAGGAAGTCAA+AGG | - | chr1.4:17120419-17120438 | MS.gene83054:intron | 40.0% | |
| CTCAGCATACATTCTCCAAA+TGG | - | chr1.4:17116948-17116967 | MS.gene83054:intron | 40.0% | |
| CTGTCTTCCTACTTTCATCT+CGG | + | chr1.4:17120553-17120572 | None:intergenic | 40.0% | |
| CTTTCATGTAGTGATGACTG+AGG | + | chr1.4:17120751-17120770 | None:intergenic | 40.0% | |
| GAAGTGATAAATGCCGGTAA+AGG | + | chr1.4:17119265-17119284 | None:intergenic | 40.0% | |
| GAATACCTCCGATAGAAGTT+TGG | + | chr1.4:17119160-17119179 | None:intergenic | 40.0% | |
| GAATACTCCTAATCCCAATC+TGG | - | chr1.4:17120670-17120689 | MS.gene83054:intron | 40.0% | |
| GAGAGAGAGAGATTGATCAA+TGG | + | chr1.4:17118692-17118711 | None:intergenic | 40.0% | |
| GATGCTGAAGTGATAAATGC+CGG | + | chr1.4:17119271-17119290 | None:intergenic | 40.0% | |
| GCAAATTATAGCAAATCGGG+TGG | + | chr1.4:17116022-17116041 | None:intergenic | 40.0% | |
| GCAGCCTAACTGCATTATAT+TGG | - | chr1.4:17118548-17118567 | MS.gene83054:intron | 40.0% | |
| GCATTTATCACTTCAGCATC+TGG | - | chr1.4:17119271-17119290 | MS.gene83054:intron | 40.0% | |
| GGACATCTCGCACATAAAAT+GGG | - | chr1.4:17119120-17119139 | MS.gene83054:intron | 40.0% | |
| GGGTACAGAAGACTTATTGA+AGG | - | chr1.4:17119919-17119938 | MS.gene83054:intron | 40.0% | |
| GTCAACTTATATAGGAGCCT+CGG | - | chr1.4:17117541-17117560 | MS.gene83054:CDS | 40.0% | |
| GTTTACTGTCATCTGCTTTC+AGG | - | chr1.4:17120237-17120256 | MS.gene83054:intron | 40.0% | |
| TAGACTCCATATCAACTAGC+CGG | + | chr1.4:17120580-17120599 | None:intergenic | 40.0% | |
| TAGTTGTCCAGATTGGGATT+AGG | + | chr1.4:17120680-17120699 | None:intergenic | 40.0% | |
| TCAATCCAGGAAGATCTATG+AGG | + | chr1.4:17117942-17117961 | None:intergenic | 40.0% | |
| TCGTCTATCGTCTTATGAAG+GGG | + | chr1.4:17116989-17117008 | None:intergenic | 40.0% | |
| TCTAGGTGCATGAAGAAACT+CGG | + | chr1.4:17115829-17115848 | None:intergenic | 40.0% | |
| TCTGTGTAGTTGTCCAGATT+GGG | + | chr1.4:17120686-17120705 | None:intergenic | 40.0% | |
| TGAATGCAGAAAGAGCAACT+CGG | - | chr1.4:17121480-17121499 | MS.gene83054:intron | 40.0% | |
| TGGACATCTCGCACATAAAA+TGG | - | chr1.4:17119119-17119138 | MS.gene83054:intron | 40.0% | |
| TTAACCCTCATAGATCTTCC+TGG | - | chr1.4:17117934-17117953 | MS.gene83054:intron | 40.0% | |
| TTAAGGAACACATCGATGGA+GGG | - | chr1.4:17119550-17119569 | MS.gene83054:intron | 40.0% | |
| TTGAGCAATGGAATTGAACG+TGG | - | chr1.4:17115243-17115262 | MS.gene83054:CDS | 40.0% | |
| TTTAAGGAACACATCGATGG+AGG | - | chr1.4:17119549-17119568 | MS.gene83054:intron | 40.0% | |
| TTTATCACTTCAGCATCTGG+AGG | - | chr1.4:17119274-17119293 | MS.gene83054:intron | 40.0% | |
| ! | AAGTATCTTTGGCTCCTTTG+CGG | + | chr1.4:17116128-17116147 | None:intergenic | 40.0% |
| ! | ATTGTCAAGGTATCTGCAAG+TGG | + | chr1.4:17117453-17117472 | None:intergenic | 40.0% |
| ! | CATCTGAAGTGGCAATATCT+TGG | + | chr1.4:17118590-17118609 | None:intergenic | 40.0% |
| ! | GATAAGGTATCTTTCCGCAA+AGG | - | chr1.4:17116111-17116130 | MS.gene83054:intron | 40.0% |
| ! | GCATCTACTAAGAGTGTGTT+TGG | + | chr1.4:17115628-17115647 | None:intergenic | 40.0% |
| ! | TGAGTTTAAGTGTTGTGGCA+CGG | - | chr1.4:17120801-17120820 | MS.gene83054:intron | 40.0% |
| ! | TGCAAAAGAAGTTGATCCCT+CGG | - | chr1.4:17118620-17118639 | MS.gene83054:intron | 40.0% |
| !! | ACAGCCAAAAAAGCACTTGA+GGG | + | chr1.4:17119208-17119227 | None:intergenic | 40.0% |
| !! | ATGGAAAGGTGTCGATCAAA+GGG | + | chr1.4:17119832-17119851 | None:intergenic | 40.0% |
| !! | CTTGACTGACTTGATTGTCA+AGG | + | chr1.4:17117466-17117485 | None:intergenic | 40.0% |
| !! | GGATTAGGAGTATTCCGATT+TGG | + | chr1.4:17120665-17120684 | None:intergenic | 40.0% |
| !! | GTTAGAGAGTGTTGTTGGAA+GGG | - | chr1.4:17115080-17115099 | MS.gene83054:intron | 40.0% |
| !! | TACAGCCAAAAAAGCACTTG+AGG | + | chr1.4:17119209-17119228 | None:intergenic | 40.0% |
| !! | TATGGAAAGGTGTCGATCAA+AGG | + | chr1.4:17119833-17119852 | None:intergenic | 40.0% |
| !! | TCAGTGTTAGAGAGTGTTGT+TGG | - | chr1.4:17115075-17115094 | MS.gene83054:intron | 40.0% |
| !! | TGTTAGAGAGTGTTGTTGGA+AGG | - | chr1.4:17115079-17115098 | MS.gene83054:intron | 40.0% |
| !! | TGTTCAAGTTGGGAGAAAAG+AGG | - | chr1.4:17121240-17121259 | MS.gene83054:intron | 40.0% |
| !! | TTCTGGAAGGAAAGCATTAC+AGG | - | chr1.4:17118980-17118999 | MS.gene83054:intron | 40.0% |
| !!! | TGGTTTTAAAGGAACTCGTG+CGG | - | chr1.4:17120266-17120285 | MS.gene83054:intron | 40.0% |
| AAAGTAGGAAGACAGTCACC+CGG | - | chr1.4:17120558-17120577 | MS.gene83054:intron | 45.0% | |
| AACCGAACCAGAACCCAAAT+CGG | - | chr1.4:17120648-17120667 | MS.gene83054:intron | 45.0% | |
| AACTTATATAGGAGCCTCGG+AGG | - | chr1.4:17117544-17117563 | MS.gene83054:CDS | 45.0% | |
| AATGATAAGCTTCCGGCATC+AGG | - | chr1.4:17115909-17115928 | MS.gene83054:CDS | 45.0% | |
| AATGCAGAGTTGGACCGTAT+TGG | - | chr1.4:17119359-17119378 | MS.gene83054:intron | 45.0% | |
| ACAGCAACCTTTGTCAATCC+AGG | + | chr1.4:17117955-17117974 | None:intergenic | 45.0% | |
| ACTGGTTGATCCAGTGTGAA+AGG | - | chr1.4:17117215-17117234 | MS.gene83054:intron | 45.0% | |
| ACTGTCTTAGGTGATCATGG+AGG | - | chr1.4:17114867-17114886 | MS.gene83054:CDS | 45.0% | |
| AGACTCCATATCAACTAGCC+GGG | + | chr1.4:17120579-17120598 | None:intergenic | 45.0% | |
| AGAGTCGTTACAGAAGCTGA+TGG | - | chr1.4:17119865-17119884 | MS.gene83054:intron | 45.0% | |
| AGATAGATCACAATTGGGGG+AGG | - | chr1.4:17117415-17117434 | MS.gene83054:CDS | 45.0% | |
| AGCATCTGGAGGTTGTCATT+AGG | - | chr1.4:17119285-17119304 | MS.gene83054:intron | 45.0% | |
| ATCATATTCTTCCACCTGCG+AGG | + | chr1.4:17117703-17117722 | None:intergenic | 45.0% | |
| ATCTGATTGCTCCAGAGCAA+GGG | - | chr1.4:17119899-17119918 | MS.gene83054:intron | 45.0% | |
| ATGTAGTGATGACTGAGGAG+GGG | + | chr1.4:17120746-17120765 | None:intergenic | 45.0% | |
| CAAAGAATCGTTTGCAGCTG+TGG | + | chr1.4:17120522-17120541 | None:intergenic | 45.0% | |
| CACAGCTGCAAACGATTCTT+TGG | - | chr1.4:17120520-17120539 | MS.gene83054:intron | 45.0% | |
| CATGTAGTGATGACTGAGGA+GGG | + | chr1.4:17120747-17120766 | None:intergenic | 45.0% | |
| CCAGGTGGGGACAAAATTTA+TGG | - | chr1.4:17119766-17119785 | MS.gene83054:intron | 45.0% | |
| CTCTGCATTAAGCTCGTCAA+TGG | + | chr1.4:17119348-17119367 | None:intergenic | 45.0% | |
| GAATGCAGAAAGAGCAACTC+GGG | - | chr1.4:17121481-17121500 | MS.gene83054:intron | 45.0% | |
| GAGCAATTTCCCCAAGAAGA+AGG | + | chr1.4:17117764-17117783 | None:intergenic | 45.0% | |
| GCATAAAATGACAGACCCGA+GGG | + | chr1.4:17118639-17118658 | None:intergenic | 45.0% | |
| GCGACTATGACGAGTTTGAT+CGG | - | chr1.4:17114816-17114835 | MS.gene83054:CDS | 45.0% | |
| GGATGAAGATCCTGCACTTA+TGG | - | chr1.4:17121512-17121531 | MS.gene83054:CDS | 45.0% | |
| GGATTGACAAAGGTTGCTGT+AGG | - | chr1.4:17117955-17117974 | MS.gene83054:intron | 45.0% | |
| GGTCCGTTCATACATTGAGA+AGG | - | chr1.4:17118125-17118144 | MS.gene83054:intron | 45.0% | |
| GGTTCATTGTCAAGTCAGAG+AGG | - | chr1.4:17121189-17121208 | MS.gene83054:intron | 45.0% | |
| GTGAAGAAAATCTCCCGCAA+AGG | + | chr1.4:17117742-17117761 | None:intergenic | 45.0% | |
| TCAAAGTCCCTGATGAAAGG+AGG | - | chr1.4:17116693-17116712 | MS.gene83054:intron | 45.0% | |
| TCAATGATGTGTGGAGAGTG+TGG | - | chr1.4:17115704-17115723 | MS.gene83054:CDS | 45.0% | |
| TCATGATATTCTCGTCTCGG+AGG | - | chr1.4:17117617-17117636 | MS.gene83054:intron | 45.0% | |
| TCATGTAGTGATGACTGAGG+AGG | + | chr1.4:17120748-17120767 | None:intergenic | 45.0% | |
| TCGTCCCTAAAATGCCTTTG+CGG | - | chr1.4:17117725-17117744 | MS.gene83054:intron | 45.0% | |
| TCTTGCCAAACTTCTATCGG+AGG | - | chr1.4:17119152-17119171 | MS.gene83054:intron | 45.0% | |
| TGACAATGAACCACAGCCTT+TGG | + | chr1.4:17121181-17121200 | None:intergenic | 45.0% | |
| TGACGAGCTTAATGCAGAGT+TGG | - | chr1.4:17119349-17119368 | MS.gene83054:intron | 45.0% | |
| TGCAAATATTGCCTCCTCCT+TGG | - | chr1.4:17120180-17120199 | MS.gene83054:intron | 45.0% | |
| TGCACTGTCTTAGGTGATCA+TGG | - | chr1.4:17114864-17114883 | MS.gene83054:CDS | 45.0% | |
| TTAGGTGATCATGGAGGTGA+GGG | - | chr1.4:17114873-17114892 | MS.gene83054:CDS | 45.0% | |
| TTCTTGGGGAAATTGCTCAC+TGG | - | chr1.4:17117766-17117785 | MS.gene83054:intron | 45.0% | |
| TTGCAATCTTATCGGGGATG+AGG | - | chr1.4:17117676-17117695 | MS.gene83054:intron | 45.0% | |
| TTTAAAGGAACTCGTGCGGA+AGG | - | chr1.4:17120270-17120289 | MS.gene83054:intron | 45.0% | |
| ! | CCATAAATTTTGTCCCCACC+TGG | + | chr1.4:17119769-17119788 | None:intergenic | 45.0% |
| ! | GATTTTCTACCACGTGGATC+TGG | - | chr1.4:17115102-17115121 | MS.gene83054:intron | 45.0% |
| ! | GCAAAAGAAGTTGATCCCTC+GGG | - | chr1.4:17118621-17118640 | MS.gene83054:intron | 45.0% |
| !! | ACACAAGACAGATGATGGAC+AGG | - | chr1.4:17115797-17115816 | MS.gene83054:CDS | 45.0% |
| !! | ACGACATTGATTCAGTGGCT+TGG | - | chr1.4:17121586-17121605 | MS.gene83054:CDS | 45.0% |
| !! | ATCTTGGTTTGCAGGAGAGA+TGG | + | chr1.4:17118574-17118593 | None:intergenic | 45.0% |
| !! | CGAGTTCCTTTAAAACCAGG+TGG | + | chr1.4:17120264-17120283 | None:intergenic | 45.0% |
| !! | GAGTATTCCGATTTGGGTTC+TGG | + | chr1.4:17120658-17120677 | None:intergenic | 45.0% |
| !! | GCACGAGTTCCTTTAAAACC+AGG | + | chr1.4:17120267-17120286 | None:intergenic | 45.0% |
| !! | GTGGCAATATCTTGGTTTGC+AGG | + | chr1.4:17118582-17118601 | None:intergenic | 45.0% |
| !! | TAGGGACGACATTGATTCAG+TGG | - | chr1.4:17121581-17121600 | MS.gene83054:CDS | 45.0% |
| !! | TGGAAAGGTGTCGATCAAAG+GGG | + | chr1.4:17119831-17119850 | None:intergenic | 45.0% |
| !! | TTCCGATTTGGGTTCTGGTT+CGG | + | chr1.4:17120653-17120672 | None:intergenic | 45.0% |
| !! | TTGCTCTGGAGCAATCAGAT+GGG | + | chr1.4:17119899-17119918 | None:intergenic | 45.0% |
| !!! | ATCTCCCGCAAAGGCATTTT+AGG | + | chr1.4:17117733-17117752 | None:intergenic | 45.0% |
| !!! | TCAGGTCCACCTGGTTTTAA+AGG | - | chr1.4:17120255-17120274 | MS.gene83054:intron | 45.0% |
| !!! | TCTCCCGCAAAGGCATTTTA+GGG | + | chr1.4:17117732-17117751 | None:intergenic | 45.0% |
| AAGTAGCAATTAGCGGCCGA+AGG | - | chr1.4:17117078-17117097 | MS.gene83054:CDS | 50.0% | |
| ACCCCTGAATCCACAGCTAT+AGG | + | chr1.4:17119389-17119408 | None:intergenic | 50.0% | |
| AGAGCAACTCGGGAACATGT+TGG | - | chr1.4:17121491-17121510 | MS.gene83054:CDS | 50.0% | |
| AGGCCTATAGCTGTGGATTC+AGG | - | chr1.4:17119383-17119402 | MS.gene83054:intron | 50.0% | |
| AGGTGAGGGTTTGTCACTCT+GGG | - | chr1.4:17114887-17114906 | MS.gene83054:CDS | 50.0% | |
| AGTCAGTCAAGTGTGGGAGA+TGG | - | chr1.4:17117475-17117494 | MS.gene83054:intron | 50.0% | |
| AGTCTTCTGTACCCTTGCTC+TGG | + | chr1.4:17119913-17119932 | None:intergenic | 50.0% | |
| ATTACAGGCTGCAGCATCCA+TGG | - | chr1.4:17118995-17119014 | MS.gene83054:intron | 50.0% | |
| CAACGTGCATGCACTGTCTT+AGG | - | chr1.4:17114855-17114874 | MS.gene83054:CDS | 50.0% | |
| CAGCTATAGGCCTGCCAATA+CGG | + | chr1.4:17119376-17119395 | None:intergenic | 50.0% | |
| CAGCTTCTGTAACGACTCTC+TGG | + | chr1.4:17119864-17119883 | None:intergenic | 50.0% | |
| CATCTGATTGCTCCAGAGCA+AGG | - | chr1.4:17119898-17119917 | MS.gene83054:intron | 50.0% | |
| CGGTTAACAATTCCGACCCA+TGG | + | chr1.4:17119015-17119034 | None:intergenic | 50.0% | |
| CGTCCCTAAAATGCCTTTGC+GGG | - | chr1.4:17117726-17117745 | MS.gene83054:intron | 50.0% | |
| CTAAGACAGTGCATGCACGT+TGG | + | chr1.4:17114857-17114876 | None:intergenic | 50.0% | |
| CTACGGGTATATGAGTGCAC+CGG | + | chr1.4:17120116-17120135 | None:intergenic | 50.0% | |
| CTGACGATTTCCCTGAACTC+TGG | + | chr1.4:17115059-17115078 | None:intergenic | 50.0% | |
| CTTAGGTGATCATGGAGGTG+AGG | - | chr1.4:17114872-17114891 | MS.gene83054:CDS | 50.0% | |
| GAATTTCAGACGTCCAGGTG+GGG | - | chr1.4:17119753-17119772 | MS.gene83054:intron | 50.0% | |
| GAGGATTACAGCATCCACAG+AGG | + | chr1.4:17119977-17119996 | None:intergenic | 50.0% | |
| GCCTATAGCTGTGGATTCAG+GGG | - | chr1.4:17119385-17119404 | MS.gene83054:intron | 50.0% | |
| GGAATTTCAGACGTCCAGGT+GGG | - | chr1.4:17119752-17119771 | MS.gene83054:intron | 50.0% | |
| GGCATAAAATGACAGACCCG+AGG | + | chr1.4:17118640-17118659 | None:intergenic | 50.0% | |
| GGCCTATAGCTGTGGATTCA+GGG | - | chr1.4:17119384-17119403 | MS.gene83054:intron | 50.0% | |
| TAGGGAGAGAGAGAGAGTTG+CGG | - | chr1.4:17115414-17115433 | MS.gene83054:intron | 50.0% | |
| TATTGGCAGGCCTATAGCTG+TGG | - | chr1.4:17119376-17119395 | MS.gene83054:intron | 50.0% | |
| TGGAATTTCAGACGTCCAGG+TGG | - | chr1.4:17119751-17119770 | MS.gene83054:intron | 50.0% | |
| TGGAGGTTGTCATTAGGCAG+CGG | - | chr1.4:17119291-17119310 | MS.gene83054:intron | 50.0% | |
| TTACAGGCTGCAGCATCCAT+GGG | - | chr1.4:17118996-17119015 | MS.gene83054:intron | 50.0% | |
| ! | AGTCACCCGGCTAGTTGATA+TGG | - | chr1.4:17120571-17120590 | MS.gene83054:CDS | 50.0% |
| ! | GGAAGGGATTTTCTACCACG+TGG | - | chr1.4:17115096-17115115 | MS.gene83054:intron | 50.0% |
| ! | TGGCATTTGCTACCTGATGC+CGG | + | chr1.4:17115924-17115943 | None:intergenic | 50.0% |
| !! | CTTGCTCTGGAGCAATCAGA+TGG | + | chr1.4:17119900-17119919 | None:intergenic | 50.0% |
| !! | TGCAAGGTATTGTCACACGG+AGG | - | chr1.4:17115757-17115776 | MS.gene83054:CDS | 50.0% |
| !! | TGCTCTGGAGCAATCAGATG+GGG | + | chr1.4:17119898-17119917 | None:intergenic | 50.0% |
| !!! | GCAAAGGCATTTTAGGGACG+AGG | + | chr1.4:17117726-17117745 | None:intergenic | 50.0% |
| AGTGTGAAAGGAGAGCCGTG+GGG | - | chr1.4:17117227-17117246 | MS.gene83054:intron | 55.0% | |
| ATCACAATTGGGGGAGGTCC+TGG | - | chr1.4:17117421-17117440 | MS.gene83054:CDS | 55.0% | |
| CAGTGTGAAAGGAGAGCCGT+GGG | - | chr1.4:17117226-17117245 | MS.gene83054:intron | 55.0% | |
| CTGCCTTACAGCAGCTGCAT+GGG | + | chr1.4:17116862-17116881 | None:intergenic | 55.0% | |
| GAAGGCAGTTGCAGCAACTG+AGG | - | chr1.4:17120288-17120307 | MS.gene83054:intron | 55.0% | |
| GAGGTGAGGGTTTGTCACTC+TGG | - | chr1.4:17114886-17114905 | MS.gene83054:CDS | 55.0% | |
| TGAGACCTGTCCACCAACGA+CGG | + | chr1.4:17114931-17114950 | None:intergenic | 55.0% | |
| TGAGGGTTTGTCACTCTGGG+AGG | - | chr1.4:17114890-17114909 | MS.gene83054:CDS | 55.0% | |
| TGTCCCATGCAGCTGCTGTA+AGG | - | chr1.4:17116856-17116875 | MS.gene83054:CDS | 55.0% | |
| ! | CAGAGTTGGACCGTATTGGC+AGG | - | chr1.4:17119363-17119382 | MS.gene83054:intron | 55.0% |
| ! | CATCTGCTTTCAGGTCCACC+TGG | - | chr1.4:17120246-17120265 | MS.gene83054:intron | 55.0% |
| ! | CTCTAGCTTACGTTCCTCCG+AGG | + | chr1.4:17117561-17117580 | None:intergenic | 55.0% |
| !! | CATCCACAGAGGCATCAGCT+GGG | + | chr1.4:17119966-17119985 | None:intergenic | 55.0% |
| !!! | GGGAGCTTTTTCAAAGCCGC+TGG | + | chr1.4:17119811-17119830 | None:intergenic | 55.0% |
| ACAATTGGGGGAGGTCCTGG+TGG | - | chr1.4:17117424-17117443 | MS.gene83054:CDS | 60.0% | |
| AGGCTGCAGCATCCATGGGT+CGG | - | chr1.4:17119000-17119019 | MS.gene83054:intron | 60.0% | |
| ATCTGCAAGTGGCCACCACC+AGG | + | chr1.4:17117442-17117461 | None:intergenic | 60.0% | |
| CCACGGCTCTCCTTTCACAC+TGG | + | chr1.4:17117228-17117247 | None:intergenic | 60.0% | |
| CCAGTGTGAAAGGAGAGCCG+TGG | - | chr1.4:17117225-17117244 | MS.gene83054:intron | 60.0% | |
| CCATGCAGCTGCTGTAAGGC+AGG | - | chr1.4:17116860-17116879 | MS.gene83054:CDS | 60.0% | |
| CCTGCCTTACAGCAGCTGCA+TGG | + | chr1.4:17116863-17116882 | None:intergenic | 60.0% | |
| CTTCCTTCTGTCGCCGTCGT+TGG | - | chr1.4:17114915-17114934 | MS.gene83054:CDS | 60.0% | |
| TCACTGGTGCGCCTCAAGTG+AGG | - | chr1.4:17117782-17117801 | MS.gene83054:intron | 60.0% | |
| !! | GCATCCACAGAGGCATCAGC+TGG | + | chr1.4:17119967-17119986 | None:intergenic | 60.0% |
| AGGCCCAGCTGATGCCTCTG+TGG | - | chr1.4:17119960-17119979 | MS.gene83054:intron | 65.0% | |
| ATCGGGGATGAGGACCTCGC+AGG | - | chr1.4:17117686-17117705 | MS.gene83054:intron | 65.0% | |
| ATTGGGGGAGGTCCTGGTGG+TGG | - | chr1.4:17117427-17117446 | MS.gene83054:CDS | 65.0% | |
| CCACCAACGACGGCGACAGA+AGG | + | chr1.4:17114921-17114940 | None:intergenic | 65.0% | |
| CCTTCTGTCGCCGTCGTTGG+TGG | - | chr1.4:17114918-17114937 | MS.gene83054:CDS | 65.0% | |
| ! | TGTCGCCGTCGTTGGTGGAC+AGG | - | chr1.4:17114923-17114942 | MS.gene83054:intron | 65.0% |
| GGGGATGAGGACCTCGCAGG+TGG | - | chr1.4:17117689-17117708 | MS.gene83054:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 17114813 | 17121614 | 17114813 | ID=MS.gene83054 |
| chr1.4 | mRNA | 17114813 | 17121614 | 17114813 | ID=MS.gene83054.t1;Parent=MS.gene83054 |
| chr1.4 | exon | 17121483 | 17121614 | 17121483 | ID=MS.gene83054.t1.exon1;Parent=MS.gene83054.t1 |
| chr1.4 | CDS | 17121483 | 17121614 | 17121483 | ID=cds.MS.gene83054.t1;Parent=MS.gene83054.t1 |
| chr1.4 | exon | 17121304 | 17121367 | 17121304 | ID=MS.gene83054.t1.exon2;Parent=MS.gene83054.t1 |
| chr1.4 | CDS | 17121304 | 17121367 | 17121304 | ID=cds.MS.gene83054.t1;Parent=MS.gene83054.t1 |
| chr1.4 | exon | 17120560 | 17120664 | 17120560 | ID=MS.gene83054.t1.exon3;Parent=MS.gene83054.t1 |
| chr1.4 | CDS | 17120560 | 17120664 | 17120560 | ID=cds.MS.gene83054.t1;Parent=MS.gene83054.t1 |
| chr1.4 | exon | 17119458 | 17119559 | 17119458 | ID=MS.gene83054.t1.exon4;Parent=MS.gene83054.t1 |
| chr1.4 | CDS | 17119458 | 17119559 | 17119458 | ID=cds.MS.gene83054.t1;Parent=MS.gene83054.t1 |
| chr1.4 | exon | 17118451 | 17118501 | 17118451 | ID=MS.gene83054.t1.exon5;Parent=MS.gene83054.t1 |
| chr1.4 | CDS | 17118451 | 17118501 | 17118451 | ID=cds.MS.gene83054.t1;Parent=MS.gene83054.t1 |
| chr1.4 | exon | 17118281 | 17118342 | 17118281 | ID=MS.gene83054.t1.exon6;Parent=MS.gene83054.t1 |
| chr1.4 | CDS | 17118281 | 17118342 | 17118281 | ID=cds.MS.gene83054.t1;Parent=MS.gene83054.t1 |
| chr1.4 | exon | 17117785 | 17117875 | 17117785 | ID=MS.gene83054.t1.exon7;Parent=MS.gene83054.t1 |
| chr1.4 | CDS | 17117785 | 17117875 | 17117785 | ID=cds.MS.gene83054.t1;Parent=MS.gene83054.t1 |
| chr1.4 | exon | 17117535 | 17117599 | 17117535 | ID=MS.gene83054.t1.exon8;Parent=MS.gene83054.t1 |
| chr1.4 | CDS | 17117535 | 17117599 | 17117535 | ID=cds.MS.gene83054.t1;Parent=MS.gene83054.t1 |
| chr1.4 | exon | 17117254 | 17117448 | 17117254 | ID=MS.gene83054.t1.exon9;Parent=MS.gene83054.t1 |
| chr1.4 | CDS | 17117254 | 17117448 | 17117254 | ID=cds.MS.gene83054.t1;Parent=MS.gene83054.t1 |
| chr1.4 | exon | 17117021 | 17117140 | 17117021 | ID=MS.gene83054.t1.exon10;Parent=MS.gene83054.t1 |
| chr1.4 | CDS | 17117021 | 17117140 | 17117021 | ID=cds.MS.gene83054.t1;Parent=MS.gene83054.t1 |
| chr1.4 | exon | 17116856 | 17116926 | 17116856 | ID=MS.gene83054.t1.exon11;Parent=MS.gene83054.t1 |
| chr1.4 | CDS | 17116856 | 17116926 | 17116856 | ID=cds.MS.gene83054.t1;Parent=MS.gene83054.t1 |
| chr1.4 | exon | 17116440 | 17116665 | 17116440 | ID=MS.gene83054.t1.exon12;Parent=MS.gene83054.t1 |
| chr1.4 | CDS | 17116440 | 17116665 | 17116440 | ID=cds.MS.gene83054.t1;Parent=MS.gene83054.t1 |
| chr1.4 | exon | 17116118 | 17116168 | 17116118 | ID=MS.gene83054.t1.exon13;Parent=MS.gene83054.t1 |
| chr1.4 | CDS | 17116118 | 17116168 | 17116118 | ID=cds.MS.gene83054.t1;Parent=MS.gene83054.t1 |
| chr1.4 | exon | 17115702 | 17115945 | 17115702 | ID=MS.gene83054.t1.exon14;Parent=MS.gene83054.t1 |
| chr1.4 | CDS | 17115702 | 17115945 | 17115702 | ID=cds.MS.gene83054.t1;Parent=MS.gene83054.t1 |
| chr1.4 | exon | 17115166 | 17115305 | 17115166 | ID=MS.gene83054.t1.exon15;Parent=MS.gene83054.t1 |
| chr1.4 | CDS | 17115166 | 17115305 | 17115166 | ID=cds.MS.gene83054.t1;Parent=MS.gene83054.t1 |
| chr1.4 | exon | 17114813 | 17114938 | 17114813 | ID=MS.gene83054.t1.exon16;Parent=MS.gene83054.t1 |
| chr1.4 | CDS | 17114813 | 17114938 | 17114813 | ID=cds.MS.gene83054.t1;Parent=MS.gene83054.t1 |
| Gene Sequence |
| Protein sequence |
