Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83488.t1 | XP_003624566.1 | 91 | 201 | 18 | 0 | 1 | 201 | 14 | 214 | 5.70E-100 | 373.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83488.t1 | Q94CD1 | 35.2 | 199 | 126 | 3 | 1 | 198 | 31 | 227 | 7.7e-29 | 128.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83488.t1 | G7KYD3 | 91.0 | 201 | 18 | 0 | 1 | 201 | 14 | 214 | 4.1e-100 | 373.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050987 | MS.gene83488 | 0.810915 | 9.09E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83488.t1 | MTR_7g084940 | 91.045 | 201 | 18 | 0 | 1 | 201 | 14 | 214 | 4.41e-134 | 383 |
| MS.gene83488.t1 | MTR_7g084910 | 86.567 | 201 | 27 | 0 | 1 | 201 | 15 | 215 | 3.49e-125 | 360 |
| MS.gene83488.t1 | MTR_7g027175 | 36.126 | 191 | 119 | 3 | 9 | 198 | 22 | 210 | 1.85e-35 | 129 |
| MS.gene83488.t1 | MTR_7g056087 | 36.667 | 210 | 117 | 5 | 2 | 201 | 3 | 206 | 2.14e-33 | 124 |
| MS.gene83488.t1 | MTR_8g096530 | 31.220 | 205 | 130 | 4 | 1 | 200 | 5 | 203 | 1.44e-32 | 122 |
| MS.gene83488.t1 | MTR_4g007540 | 33.498 | 203 | 127 | 5 | 1 | 200 | 1 | 198 | 4.10e-32 | 120 |
| MS.gene83488.t1 | MTR_3g098980 | 32.836 | 201 | 132 | 3 | 1 | 200 | 12 | 210 | 8.51e-30 | 114 |
| MS.gene83488.t1 | MTR_8g075610 | 33.500 | 200 | 118 | 6 | 10 | 200 | 1 | 194 | 5.33e-29 | 112 |
| MS.gene83488.t1 | MTR_2g105330 | 31.373 | 204 | 130 | 5 | 1 | 200 | 1 | 198 | 9.52e-28 | 108 |
| MS.gene83488.t1 | MTR_1g081660 | 30.198 | 202 | 138 | 2 | 2 | 200 | 17 | 218 | 1.66e-27 | 108 |
| MS.gene83488.t1 | MTR_2g064495 | 30.882 | 204 | 131 | 5 | 1 | 200 | 1 | 198 | 2.35e-27 | 107 |
| MS.gene83488.t1 | MTR_4g127650 | 32.338 | 201 | 132 | 3 | 2 | 199 | 9 | 208 | 2.71e-27 | 107 |
| MS.gene83488.t1 | MTR_3g112180 | 35.176 | 199 | 113 | 6 | 11 | 200 | 20 | 211 | 4.98e-27 | 107 |
| MS.gene83488.t1 | MTR_1g053315 | 32.093 | 215 | 131 | 7 | 1 | 201 | 16 | 229 | 1.64e-25 | 102 |
| MS.gene83488.t1 | MTR_1g040175 | 29.851 | 201 | 136 | 4 | 3 | 199 | 9 | 208 | 3.06e-24 | 99.4 |
| MS.gene83488.t1 | MTR_1g040215 | 29.353 | 201 | 137 | 4 | 2 | 198 | 8 | 207 | 1.49e-23 | 97.4 |
| MS.gene83488.t1 | MTR_7g114560 | 27.411 | 197 | 138 | 4 | 7 | 199 | 14 | 209 | 2.13e-23 | 97.1 |
| MS.gene83488.t1 | MTR_7g085930 | 34.872 | 195 | 121 | 4 | 3 | 193 | 6 | 198 | 2.66e-23 | 96.7 |
| MS.gene83488.t1 | MTR_1g040320 | 29.064 | 203 | 139 | 4 | 2 | 200 | 8 | 209 | 4.81e-23 | 95.9 |
| MS.gene83488.t1 | MTR_7g114520 | 28.788 | 198 | 135 | 5 | 7 | 199 | 15 | 211 | 7.87e-23 | 95.5 |
| MS.gene83488.t1 | MTR_5g076700 | 27.919 | 197 | 137 | 4 | 7 | 199 | 14 | 209 | 2.54e-22 | 94.0 |
| MS.gene83488.t1 | MTR_7g114470 | 28.426 | 197 | 136 | 4 | 7 | 199 | 15 | 210 | 8.26e-22 | 92.4 |
| MS.gene83488.t1 | MTR_7g085990 | 34.375 | 192 | 120 | 4 | 3 | 190 | 2 | 191 | 1.01e-21 | 92.4 |
| MS.gene83488.t1 | MTR_7g114490 | 27.919 | 197 | 137 | 4 | 7 | 199 | 14 | 209 | 4.22e-21 | 90.5 |
| MS.gene83488.t1 | MTR_7g114550 | 26.904 | 197 | 139 | 4 | 7 | 199 | 14 | 209 | 7.92e-21 | 89.7 |
| MS.gene83488.t1 | MTR_7g110610 | 33.000 | 200 | 121 | 7 | 1 | 195 | 3 | 194 | 2.19e-20 | 88.2 |
| MS.gene83488.t1 | MTR_1g040315 | 27.228 | 202 | 142 | 4 | 2 | 199 | 8 | 208 | 2.49e-20 | 88.2 |
| MS.gene83488.t1 | MTR_4g097090 | 31.319 | 182 | 120 | 4 | 22 | 199 | 28 | 208 | 4.18e-20 | 87.8 |
| MS.gene83488.t1 | MTR_3g049150 | 29.082 | 196 | 135 | 3 | 3 | 196 | 2 | 195 | 2.92e-19 | 85.1 |
| MS.gene83488.t1 | MTR_3g026950 | 32.512 | 203 | 128 | 6 | 3 | 200 | 2 | 200 | 2.96e-19 | 85.1 |
| MS.gene83488.t1 | MTR_4g013050 | 31.176 | 170 | 107 | 5 | 4 | 170 | 5 | 167 | 5.26e-19 | 84.3 |
| MS.gene83488.t1 | MTR_1g040195 | 25.389 | 193 | 116 | 5 | 11 | 199 | 17 | 185 | 4.37e-16 | 76.3 |
| MS.gene83488.t1 | MTR_4g055170 | 31.343 | 201 | 119 | 8 | 3 | 194 | 17 | 207 | 3.79e-15 | 73.6 |
| MS.gene83488.t1 | MTR_7g086000 | 28.500 | 200 | 134 | 6 | 1 | 193 | 2 | 199 | 4.05e-14 | 70.5 |
| MS.gene83488.t1 | MTR_8g079970 | 28.814 | 177 | 100 | 6 | 24 | 185 | 26 | 191 | 1.78e-13 | 68.6 |
| MS.gene83488.t1 | MTR_3g450710 | 35.032 | 157 | 83 | 7 | 56 | 203 | 65 | 211 | 5.74e-13 | 67.0 |
| MS.gene83488.t1 | MTR_3g086020 | 31.013 | 158 | 99 | 3 | 38 | 194 | 43 | 191 | 7.16e-13 | 66.6 |
| MS.gene83488.t1 | MTR_3g071320 | 27.957 | 186 | 112 | 4 | 3 | 176 | 5 | 180 | 7.93e-13 | 66.6 |
| MS.gene83488.t1 | MTR_5g026320 | 30.636 | 173 | 111 | 4 | 24 | 195 | 41 | 205 | 2.62e-11 | 62.4 |
| MS.gene83488.t1 | MTR_3g465990 | 29.442 | 197 | 113 | 8 | 10 | 190 | 17 | 203 | 5.82e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83488.t1 | AT1G65450 | 53.465 | 202 | 93 | 1 | 1 | 201 | 16 | 217 | 1.26e-73 | 229 |
| MS.gene83488.t1 | AT1G65450 | 50.360 | 139 | 68 | 1 | 1 | 138 | 16 | 154 | 1.31e-46 | 151 |
| MS.gene83488.t1 | AT5G41040 | 35.000 | 200 | 127 | 3 | 1 | 199 | 15 | 212 | 5.66e-37 | 134 |
| MS.gene83488.t1 | AT5G41040 | 35.176 | 199 | 126 | 3 | 1 | 198 | 31 | 227 | 7.17e-37 | 134 |
| MS.gene83488.t1 | AT5G48930 | 37.255 | 204 | 118 | 5 | 1 | 200 | 1 | 198 | 1.72e-35 | 129 |
| MS.gene83488.t1 | AT5G63560 | 33.990 | 203 | 127 | 4 | 3 | 201 | 9 | 208 | 5.30e-32 | 120 |
| MS.gene83488.t1 | AT3G48720 | 32.836 | 201 | 131 | 3 | 3 | 201 | 9 | 207 | 1.06e-30 | 116 |
| MS.gene83488.t1 | AT5G57840 | 32.353 | 204 | 130 | 5 | 1 | 201 | 1 | 199 | 3.17e-26 | 104 |
| MS.gene83488.t1 | AT2G19070 | 33.663 | 202 | 129 | 4 | 3 | 201 | 4 | 203 | 1.43e-25 | 103 |
| MS.gene83488.t1 | AT1G03390 | 33.019 | 212 | 130 | 6 | 1 | 201 | 15 | 225 | 2.67e-25 | 102 |
| MS.gene83488.t1 | AT1G27620 | 30.808 | 198 | 126 | 5 | 6 | 199 | 12 | 202 | 4.61e-23 | 95.9 |
| MS.gene83488.t1 | AT4G31910 | 31.915 | 188 | 111 | 5 | 18 | 190 | 26 | 211 | 6.01e-19 | 84.3 |
| MS.gene83488.t1 | AT5G17540 | 29.293 | 198 | 132 | 5 | 2 | 193 | 8 | 203 | 8.43e-19 | 84.0 |
| MS.gene83488.t1 | AT1G28680 | 29.612 | 206 | 134 | 7 | 5 | 201 | 6 | 209 | 5.09e-18 | 81.6 |
| MS.gene83488.t1 | AT3G03480 | 30.457 | 197 | 125 | 6 | 2 | 190 | 18 | 210 | 7.11e-18 | 81.3 |
| MS.gene83488.t1 | AT1G28680 | 29.665 | 209 | 134 | 8 | 3 | 201 | 4 | 209 | 7.12e-18 | 81.3 |
| MS.gene83488.t1 | AT5G16410 | 31.285 | 179 | 112 | 5 | 18 | 195 | 55 | 223 | 2.75e-17 | 79.7 |
| MS.gene83488.t1 | AT5G07080 | 32.124 | 193 | 115 | 6 | 10 | 192 | 21 | 207 | 1.32e-15 | 74.7 |
| MS.gene83488.t1 | AT1G78990 | 32.877 | 146 | 88 | 5 | 51 | 195 | 62 | 198 | 1.76e-14 | 71.6 |
| MS.gene83488.t1 | AT1G24430 | 36.552 | 145 | 80 | 6 | 53 | 196 | 59 | 192 | 1.84e-14 | 71.6 |
| MS.gene83488.t1 | AT1G31490 | 33.684 | 190 | 110 | 7 | 16 | 199 | 20 | 199 | 4.25e-14 | 70.5 |
| MS.gene83488.t1 | AT2G23510 | 30.288 | 208 | 120 | 9 | 8 | 198 | 18 | 217 | 6.11e-14 | 70.1 |
| MS.gene83488.t1 | AT3G47170 | 30.303 | 198 | 118 | 8 | 10 | 192 | 19 | 211 | 1.01e-13 | 69.3 |
| MS.gene83488.t1 | AT3G62160 | 31.844 | 179 | 100 | 8 | 22 | 190 | 24 | 190 | 1.15e-12 | 66.2 |
| MS.gene83488.t1 | AT1G65450 | 56.604 | 53 | 23 | 0 | 149 | 201 | 1 | 53 | 1.73e-12 | 65.1 |
| MS.gene83488.t1 | AT4G24510 | 28.495 | 186 | 115 | 8 | 3 | 175 | 6 | 186 | 9.59e-11 | 60.5 |
Find 46 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTATCCTAATCAAGCTTT+TGG | 0.261339 | 7.1:-20053759 | MS.gene83488:CDS |
| GGCTTCTAGTGAATACAAAT+TGG | 0.270068 | 7.1:-20053799 | MS.gene83488:CDS |
| CTTAGACAACCTTGCTTCAT+TGG | 0.295967 | 7.1:-20049586 | MS.gene83488:CDS |
| TAAAGCTTTCTTTAACTTCT+CGG | 0.299134 | 7.1:+20053929 | None:intergenic |
| GAATACAAATTGGATCAAAT+TGG | 0.306770 | 7.1:-20053789 | MS.gene83488:CDS |
| AATTGTCCAAAAGCTTGATT+AGG | 0.365401 | 7.1:+20053753 | None:intergenic |
| GTAGCTTATGACTTCCTTGC+TGG | 0.368529 | 7.1:-20053894 | MS.gene83488:CDS |
| GCGGTATATCACCTATCTTA+TGG | 0.376410 | 7.1:+20053709 | None:intergenic |
| AACTTCTCGGTCACTATTTG+AGG | 0.395634 | 7.1:+20053942 | None:intergenic |
| ATTGGATCAAATTGGAAACT+TGG | 0.396402 | 7.1:-20053781 | MS.gene83488:CDS |
| TGCGAGACCACCACACTTGA+AGG | 0.413890 | 7.1:+20049662 | None:intergenic |
| AAGTGTGGTGGTCTCGCAAT+AGG | 0.428795 | 7.1:-20049657 | MS.gene83488:CDS |
| GCAAAAGATTTCCATAAGAT+AGG | 0.439156 | 7.1:-20053720 | MS.gene83488:CDS |
| TATCGACCTTGAATCATCTC+AGG | 0.446394 | 7.1:+20049478 | None:intergenic |
| GTGGGGAAGTTGACATGTGG+AGG | 0.464128 | 7.1:+20049501 | None:intergenic |
| ACAAGCCATGCAATCTTTGA+CGG | 0.466999 | 7.1:-20049627 | MS.gene83488:CDS |
| TTGGATCAAATTGGAAACTT+GGG | 0.470071 | 7.1:-20053780 | MS.gene83488:CDS |
| AGATGAACTCTGAAACCAAC+AGG | 0.481872 | 7.1:-20053863 | MS.gene83488:CDS |
| ACCTTGAATCATCTCAGGGT+GGG | 0.501364 | 7.1:+20049483 | None:intergenic |
| GCAATCTATTTCCAACCTGT+TGG | 0.504095 | 7.1:+20053848 | None:intergenic |
| CAGGAGTTGTCTGTCATGGA+AGG | 0.524819 | 7.1:+20049536 | None:intergenic |
| GATTGCAATGCAGAAGGTGT+TGG | 0.525420 | 7.1:-20053831 | MS.gene83488:CDS |
| GTGGAGGGGATCGTGCAGCC+AGG | 0.527015 | 7.1:+20049517 | None:intergenic |
| TGGGGAAGTTGACATGTGGA+GGG | 0.529128 | 7.1:+20049502 | None:intergenic |
| CTTCCATGACAGACAACTCC+TGG | 0.533510 | 7.1:-20049535 | MS.gene83488:CDS |
| CAGCCAGGAGTTGTCTGTCA+TGG | 0.538049 | 7.1:+20049532 | None:intergenic |
| GGGGAAGTTGACATGTGGAG+GGG | 0.544898 | 7.1:+20049503 | None:intergenic |
| CCTTGAATCATCTCAGGGTG+GGG | 0.547680 | 7.1:+20049484 | None:intergenic |
| TATACCGCTATGTGTTGTCC+AGG | 0.567265 | 7.1:-20053694 | MS.gene83488:intron |
| TTCTCGGTCACTATTTGAGG+AGG | 0.569637 | 7.1:+20053945 | None:intergenic |
| GAAATAGATTGCAATGCAGA+AGG | 0.578803 | 7.1:-20053837 | MS.gene83488:CDS |
| GTCTATGTTTGATAAGAACA+AGG | 0.588679 | 7.1:+20054025 | None:intergenic |
| GAACTCTGAAACCAACAGGT+TGG | 0.598517 | 7.1:-20053859 | MS.gene83488:CDS |
| TAAGTCCGTCAAAGATTGCA+TGG | 0.607205 | 7.1:+20049622 | None:intergenic |
| AGGAGTTGTCTGTCATGGAA+GGG | 0.626132 | 7.1:+20049537 | None:intergenic |
| TCTCGGTCACTATTTGAGGA+GGG | 0.639489 | 7.1:+20053946 | None:intergenic |
| TCATCTTTAATCTTCCAGCA+AGG | 0.642443 | 7.1:+20053880 | None:intergenic |
| ATCGACCTTGAATCATCTCA+GGG | 0.643910 | 7.1:+20049479 | None:intergenic |
| TGTCACAGTCAATTGCATGT+TGG | 0.649994 | 7.1:+20049560 | None:intergenic |
| CAGCTAACATCCTTCAAGTG+TGG | 0.651061 | 7.1:-20049672 | MS.gene83488:CDS |
| GTTCTTATCAAACATAGACA+AGG | 0.658774 | 7.1:-20054021 | MS.gene83488:CDS |
| CTAACATCCTTCAAGTGTGG+TGG | 0.659409 | 7.1:-20049669 | MS.gene83488:CDS |
| GACCTTGAATCATCTCAGGG+TGG | 0.661273 | 7.1:+20049482 | None:intergenic |
| AGGGTGGGGAAGTTGACATG+TGG | 0.663523 | 7.1:+20049498 | None:intergenic |
| TGTTGGTAGCCAATGAAGCA+AGG | 0.685871 | 7.1:+20049577 | None:intergenic |
| TGTACCTGGACAACACATAG+CGG | 0.761399 | 7.1:+20053690 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTTTATATGTTTTTTTTA+AGG | - | chr7.1:20050093-20050112 | MS.gene83488:intron | 10.0% |
| !!! | TTGAAAATTTTCTTATAAAT+AGG | + | chr7.1:20051745-20051764 | None:intergenic | 10.0% |
| !!! | TTTTAATAATATGCATAAAT+AGG | - | chr7.1:20053641-20053660 | MS.gene83488:intron | 10.0% |
| !! | AAATTCTTGATAAAATTTCT+TGG | - | chr7.1:20052256-20052275 | MS.gene83488:intron | 15.0% |
| !! | AAGTTTACAAAATATAATCT+TGG | + | chr7.1:20052759-20052778 | None:intergenic | 15.0% |
| !! | AGTTTACAAAATATAATCTT+GGG | + | chr7.1:20052758-20052777 | None:intergenic | 15.0% |
| !! | ATCAATTATGATTGAAATTA+GGG | + | chr7.1:20053837-20053856 | None:intergenic | 15.0% |
| !! | ATGAAACATTATTTCAATTA+GGG | - | chr7.1:20053242-20053261 | MS.gene83488:intron | 15.0% |
| !! | ATGGATGATTAAAAAAAATT+TGG | + | chr7.1:20050261-20050280 | None:intergenic | 15.0% |
| !! | CAAAAATAAACATTAGTATA+CGG | - | chr7.1:20053108-20053127 | MS.gene83488:intron | 15.0% |
| !! | CAAATAAATAAAATAGAACA+CGG | + | chr7.1:20052956-20052975 | None:intergenic | 15.0% |
| !! | GAATGATAAAATGATATTTA+TGG | + | chr7.1:20052643-20052662 | None:intergenic | 15.0% |
| !! | TAAATAAACAACTCAAATAA+TGG | + | chr7.1:20053574-20053593 | None:intergenic | 15.0% |
| !! | TATGAAACATTATTTCAATT+AGG | - | chr7.1:20053241-20053260 | MS.gene83488:intron | 15.0% |
| !! | TTTCACTAAAAAATAAAACT+AGG | - | chr7.1:20050367-20050386 | MS.gene83488:intron | 15.0% |
| !!! | AAATAATGGACTTTTTAAAT+AGG | + | chr7.1:20053560-20053579 | None:intergenic | 15.0% |
| !!! | AAATTTTCCAAATATTTTTC+AGG | - | chr7.1:20050976-20050995 | MS.gene83488:intron | 15.0% |
| !!! | AATGTTTGTCTTTTTAATAT+TGG | - | chr7.1:20051849-20051868 | MS.gene83488:intron | 15.0% |
| !!! | AATTTTCCAAATATTTTTCA+GGG | - | chr7.1:20050977-20050996 | MS.gene83488:intron | 15.0% |
| !!! | ATACTTCACAAAATTTTATA+AGG | - | chr7.1:20051884-20051903 | MS.gene83488:intron | 15.0% |
| !!! | GTATACTAATGTTTATTTTT+GGG | + | chr7.1:20053109-20053128 | None:intergenic | 15.0% |
| !!! | GTTTAAGTGATTTTTTTTTA+AGG | - | chr7.1:20050120-20050139 | MS.gene83488:intron | 15.0% |
| !!! | TACTTCACAAAATTTTATAA+GGG | - | chr7.1:20051885-20051904 | MS.gene83488:intron | 15.0% |
| !!! | TCTAAAATAAAATATGTCAA+AGG | + | chr7.1:20050056-20050075 | None:intergenic | 15.0% |
| !! | AAAAAAAATTTGGCGATTAA+TGG | + | chr7.1:20050251-20050270 | None:intergenic | 20.0% |
| !! | AAAAAGACAAACATTAAATG+AGG | + | chr7.1:20051844-20051863 | None:intergenic | 20.0% |
| !! | AAAAGACAAACATTAAATGA+GGG | + | chr7.1:20051843-20051862 | None:intergenic | 20.0% |
| !! | AAATCTATATATAGCAAACT+CGG | + | chr7.1:20050700-20050719 | None:intergenic | 20.0% |
| !! | AAGAGATAATCTAATTAAGA+GGG | - | chr7.1:20051672-20051691 | MS.gene83488:intron | 20.0% |
| !! | ACAAACCTATTTAAGTAAAT+AGG | + | chr7.1:20053712-20053731 | None:intergenic | 20.0% |
| !! | ATATTGCTATATTTGATTCT+TGG | - | chr7.1:20052176-20052195 | MS.gene83488:intron | 20.0% |
| !! | CAATGACTTTAATAATAAGT+AGG | + | chr7.1:20053429-20053448 | None:intergenic | 20.0% |
| !! | CTATTTAGAAGTAGATAAAA+TGG | + | chr7.1:20053458-20053477 | None:intergenic | 20.0% |
| !! | GATCAATTATGATTGAAATT+AGG | + | chr7.1:20053838-20053857 | None:intergenic | 20.0% |
| !! | TATTGCTATATTTGATTCTT+GGG | - | chr7.1:20052177-20052196 | MS.gene83488:intron | 20.0% |
| !!! | AAGTGATTTTTTTTTAAGGA+TGG | - | chr7.1:20050124-20050143 | MS.gene83488:intron | 20.0% |
| !!! | AATTTTCTTATAAATAGGAC+CGG | + | chr7.1:20051740-20051759 | None:intergenic | 20.0% |
| !!! | ACATTATTTTTACTCAAACT+TGG | - | chr7.1:20050888-20050907 | MS.gene83488:intron | 20.0% |
| !!! | ATAATTTTTCTGGGAATATA+AGG | + | chr7.1:20052734-20052753 | None:intergenic | 20.0% |
| !!! | ATTAGTTGAGTAGATTTTAA+TGG | + | chr7.1:20050527-20050546 | None:intergenic | 20.0% |
| !!! | CATTTTATCTACTTCTAAAT+AGG | - | chr7.1:20053456-20053475 | MS.gene83488:intron | 20.0% |
| !!! | CGTATACTAATGTTTATTTT+TGG | + | chr7.1:20053110-20053129 | None:intergenic | 20.0% |
| !!! | TAACAGTCATTTTAACTTTA+AGG | + | chr7.1:20050673-20050692 | None:intergenic | 20.0% |
| !!! | TAGCAACATTTAATTTTAGT+TGG | + | chr7.1:20051160-20051179 | None:intergenic | 20.0% |
| !!! | TGCACTGTTTTTTTTTTTTA+CGG | - | chr7.1:20051549-20051568 | MS.gene83488:intron | 20.0% |
| !!! | TGGTTTCTTTTCTTATAATA+AGG | - | chr7.1:20051971-20051990 | MS.gene83488:intron | 20.0% |
| !!! | TGTGACTTTTTCTTATATAT+AGG | + | chr7.1:20051782-20051801 | None:intergenic | 20.0% |
| !!! | TTTAACTTTAAGGATTAAAC+TGG | + | chr7.1:20050663-20050682 | None:intergenic | 20.0% |
| !!! | TTTGTCTTTTTAATATTGGT+GGG | - | chr7.1:20051853-20051872 | MS.gene83488:intron | 20.0% |
| ! | AAACCCAATCAATAGTATAA+GGG | + | chr7.1:20052794-20052813 | None:intergenic | 25.0% |
| ! | AAATAAACATTAGTATACGG+CGG | - | chr7.1:20053111-20053130 | MS.gene83488:intron | 25.0% |
| ! | AACATTATTTCAATTAGGGT+TGG | - | chr7.1:20053246-20053265 | MS.gene83488:intron | 25.0% |
| ! | AATAATATGCATAAATAGGC+TGG | - | chr7.1:20053645-20053664 | MS.gene83488:intron | 25.0% |
| ! | ACATTATTTCAATTAGGGTT+GGG | - | chr7.1:20053247-20053266 | MS.gene83488:intron | 25.0% |
| ! | ACCTAAAAATAAGCTAATGA+CGG | + | chr7.1:20050442-20050461 | None:intergenic | 25.0% |
| ! | ACTTCTTTAATTAATGCACT+CGG | + | chr7.1:20052082-20052101 | None:intergenic | 25.0% |
| ! | ATAAAGCCTATTTCACTATA+AGG | - | chr7.1:20053526-20053545 | MS.gene83488:intron | 25.0% |
| ! | ATCTCAAAAACCTTTACTTA+AGG | + | chr7.1:20049952-20049971 | None:intergenic | 25.0% |
| ! | ATTATGATTGAAATTAGGGT+TGG | + | chr7.1:20053833-20053852 | None:intergenic | 25.0% |
| ! | CAAGAGATAATCTAATTAAG+AGG | - | chr7.1:20051671-20051690 | MS.gene83488:intron | 25.0% |
| ! | CAATGTGAGTTAAAATTGTA+TGG | - | chr7.1:20052036-20052055 | MS.gene83488:intron | 25.0% |
| ! | CAATTTATCATCCTTAGTAA+AGG | - | chr7.1:20049923-20049942 | MS.gene83488:intron | 25.0% |
| ! | CTCATTATTGTGAAAAACTA+TGG | + | chr7.1:20050015-20050034 | None:intergenic | 25.0% |
| ! | GAATACAAATTGGATCAAAT+TGG | - | chr7.1:20049788-20049807 | MS.gene83488:intron | 25.0% |
| ! | GTAGAGAAAAGTTCTTAAAA+TGG | + | chr7.1:20052310-20052329 | None:intergenic | 25.0% |
| ! | TAAGGAAACCAAAAAAAGTT+CGG | - | chr7.1:20052230-20052249 | MS.gene83488:intron | 25.0% |
| ! | TAATGTCAACTTCATTTGAT+TGG | + | chr7.1:20050874-20050893 | None:intergenic | 25.0% |
| ! | TACTTCTAAATAGGCTAAAT+AGG | - | chr7.1:20053465-20053484 | MS.gene83488:intron | 25.0% |
| ! | TTAAGACCTTATAGTGAAAT+AGG | + | chr7.1:20053535-20053554 | None:intergenic | 25.0% |
| ! | TTATGATTGAAATTAGGGTT+GGG | + | chr7.1:20053832-20053851 | None:intergenic | 25.0% |
| ! | TTGGATATTCTGCATATATA+CGG | - | chr7.1:20052927-20052946 | MS.gene83488:intron | 25.0% |
| !! | AAAGCTGAGGAATTTTATAA+TGG | + | chr7.1:20051245-20051264 | None:intergenic | 25.0% |
| !! | AATCATTTTCTTCGGAAAAA+CGG | - | chr7.1:20050544-20050563 | MS.gene83488:intron | 25.0% |
| !! | AATCTTGGGAATAATTTTTC+TGG | + | chr7.1:20052744-20052763 | None:intergenic | 25.0% |
| !! | ACTCAACTAATCATTTTCTT+CGG | - | chr7.1:20050536-20050555 | MS.gene83488:intron | 25.0% |
| !! | AGTTGAAAATGACACATTTT+AGG | - | chr7.1:20052119-20052138 | MS.gene83488:intron | 25.0% |
| !! | ATCTTGGGAATAATTTTTCT+GGG | + | chr7.1:20052743-20052762 | None:intergenic | 25.0% |
| !! | CATAGTTTTTCACAATAATG+AGG | - | chr7.1:20050013-20050032 | MS.gene83488:intron | 25.0% |
| !! | GAAAAATCATTGAAGTTTTG+TGG | + | chr7.1:20049508-20049527 | None:intergenic | 25.0% |
| !! | GTTAGTATTTAAAGTATTCC+TGG | + | chr7.1:20052670-20052689 | None:intergenic | 25.0% |
| !! | GTTTGTCTTTTTAATATTGG+TGG | - | chr7.1:20051852-20051871 | MS.gene83488:intron | 25.0% |
| !! | TAAAGCTTTCTTTAACTTCT+CGG | + | chr7.1:20049651-20049670 | None:intergenic | 25.0% |
| !! | TCATTTTATCATTCATTTCC+AGG | - | chr7.1:20052649-20052668 | MS.gene83488:intron | 25.0% |
| !! | TCTTTTCTTATAATAAGGAC+CGG | - | chr7.1:20051976-20051995 | MS.gene83488:intron | 25.0% |
| !! | TTATACTATTGATTGGGTTT+GGG | - | chr7.1:20052794-20052813 | MS.gene83488:intron | 25.0% |
| !!! | AATTTATCCCGAACTTTTTT+TGG | + | chr7.1:20052241-20052260 | None:intergenic | 25.0% |
| !!! | AGAATGTTGTTTTGTTCATA+AGG | - | chr7.1:20052573-20052592 | MS.gene83488:intron | 25.0% |
| !!! | GTTTTGTTCATAAGGAAATT+AGG | - | chr7.1:20052581-20052600 | MS.gene83488:intron | 25.0% |
| !!! | TGCTTCTTTTCTAATTTGTT+TGG | - | chr7.1:20052376-20052395 | MS.gene83488:intron | 25.0% |
| !!! | TTCTTTTCGATTTGTTTTGA+TGG | + | chr7.1:20049530-20049549 | None:intergenic | 25.0% |
| AAAACCAAGACAATCATTAG+TGG | + | chr7.1:20051942-20051961 | None:intergenic | 30.0% | |
| AACCCAATCAATAGTATAAG+GGG | + | chr7.1:20052793-20052812 | None:intergenic | 30.0% | |
| AACGTCAAAAAAACGGTTAA+TGG | + | chr7.1:20050280-20050299 | None:intergenic | 30.0% | |
| AAGGAAACCAAAAAAAGTTC+GGG | - | chr7.1:20052231-20052250 | MS.gene83488:intron | 30.0% | |
| AAGGAAATTAGGAGGAATAA+AGG | - | chr7.1:20052592-20052611 | MS.gene83488:intron | 30.0% | |
| AAGGGTTAACGTCAAAAAAA+CGG | + | chr7.1:20050287-20050306 | None:intergenic | 30.0% | |
| AATTGTCCAAAAGCTTGATT+AGG | + | chr7.1:20049827-20049846 | None:intergenic | 30.0% | |
| ACTTAAGGAAACCTTTACTA+AGG | + | chr7.1:20049937-20049956 | None:intergenic | 30.0% | |
| ATTAAATGCAAAATAGTCCC+TGG | - | chr7.1:20050620-20050639 | MS.gene83488:intron | 30.0% | |
| ATTGGATCAAATTGGAAACT+TGG | - | chr7.1:20049796-20049815 | MS.gene83488:intron | 30.0% | |
| CAAACCCAATCAATAGTATA+AGG | + | chr7.1:20052795-20052814 | None:intergenic | 30.0% | |
| CCTAAAAATAAGCTAATGAC+GGG | + | chr7.1:20050441-20050460 | None:intergenic | 30.0% | |
| CCTATTTAAGTAAATAGGTG+AGG | + | chr7.1:20053707-20053726 | None:intergenic | 30.0% | |
| CCTCACCTATTTACTTAAAT+AGG | - | chr7.1:20053704-20053723 | MS.gene83488:CDS | 30.0% | |
| GACAAGAATATATTTGTACC+TGG | + | chr7.1:20049904-20049923 | None:intergenic | 30.0% | |
| GATTGTAAAAGAGTTGTTGA+TGG | + | chr7.1:20051320-20051339 | None:intergenic | 30.0% | |
| GCAAAAGATTTCCATAAGAT+AGG | - | chr7.1:20049857-20049876 | MS.gene83488:intron | 30.0% | |
| GTAAAGGTTTCCTTAAGTAA+AGG | - | chr7.1:20049939-20049958 | MS.gene83488:intron | 30.0% | |
| GTCTATGTTTGATAAGAACA+AGG | + | chr7.1:20049555-20049574 | None:intergenic | 30.0% | |
| GTTCTTATCAAACATAGACA+AGG | - | chr7.1:20049556-20049575 | MS.gene83488:CDS | 30.0% | |
| TAATAAGTAGGCCTGTAAAT+AGG | + | chr7.1:20053417-20053436 | None:intergenic | 30.0% | |
| TCAACTTCATTTGATTGGAT+GGG | + | chr7.1:20050869-20050888 | None:intergenic | 30.0% | |
| TTAAGGATTAAACTGGCTAA+CGG | + | chr7.1:20050656-20050675 | None:intergenic | 30.0% | |
| TTATGTAAATGCAACTCGTT+TGG | - | chr7.1:20053057-20053076 | MS.gene83488:intron | 30.0% | |
| TTATTAAAAAGGCTTGGCTT+AGG | + | chr7.1:20053742-20053761 | None:intergenic | 30.0% | |
| TTGGATCAAATTGGAAACTT+GGG | - | chr7.1:20049797-20049816 | MS.gene83488:intron | 30.0% | |
| TTGTTCATAAGGAAATTAGG+AGG | - | chr7.1:20052584-20052603 | MS.gene83488:intron | 30.0% | |
| TTTAATAAACAGGCCAATCT+AGG | - | chr7.1:20053754-20053773 | MS.gene83488:CDS | 30.0% | |
| TTTCAAATGCATTAAAGCTG+AGG | + | chr7.1:20051258-20051277 | None:intergenic | 30.0% | |
| ! | CGTTTGTTTCAAGTCATATT+TGG | - | chr7.1:20052461-20052480 | MS.gene83488:intron | 30.0% |
| ! | CTTATACTATTGATTGGGTT+TGG | - | chr7.1:20052793-20052812 | MS.gene83488:intron | 30.0% |
| ! | GCATCACTCTTTTATAATCT+CGG | + | chr7.1:20051049-20051068 | None:intergenic | 30.0% |
| ! | TGAATTTTCTTCGTTGGATT+AGG | - | chr7.1:20051108-20051127 | MS.gene83488:intron | 30.0% |
| ! | TGTTATGTTTCGACAGTTTT+AGG | - | chr7.1:20052903-20052922 | MS.gene83488:intron | 30.0% |
| ! | TGTTTTCTTTGTCTAGGTTT+TGG | - | chr7.1:20052870-20052889 | MS.gene83488:intron | 30.0% |
| ! | TTGAAATGTGTTATTATCGC+TGG | - | chr7.1:20051282-20051301 | MS.gene83488:intron | 30.0% |
| ! | TTTTTCCACTTCTCTTAACA+AGG | + | chr7.1:20051507-20051526 | None:intergenic | 30.0% |
| !! | AAAAGGAGTATTGATAATCC+CGG | - | chr7.1:20050316-20050335 | MS.gene83488:intron | 30.0% |
| !! | ATCGATTTTATATACTCCTC+CGG | + | chr7.1:20051998-20052017 | None:intergenic | 30.0% |
| !! | GATTGGCCTGTTTATTAAAA+AGG | + | chr7.1:20053753-20053772 | None:intergenic | 30.0% |
| !! | TTTTCTGGGAATATAAGGAT+GGG | + | chr7.1:20052729-20052748 | None:intergenic | 30.0% |
| !! | TTTTTCTGGGAATATAAGGA+TGG | + | chr7.1:20052730-20052749 | None:intergenic | 30.0% |
| !!! | AGGCTTGCAAATTTTTTCAT+AGG | + | chr7.1:20053315-20053334 | None:intergenic | 30.0% |
| !!! | GTCTTGGTTTTGATGATTTT+TGG | - | chr7.1:20051951-20051970 | MS.gene83488:intron | 30.0% |
| !!! | TTTTTTTGACGTTAACCCTT+TGG | - | chr7.1:20050287-20050306 | MS.gene83488:intron | 30.0% |
| !!! | TTTTTTTTACGGTATGCACA+TGG | - | chr7.1:20051560-20051579 | MS.gene83488:intron | 30.0% |
| AAGTCATATTTGGAGATTCC+TGG | - | chr7.1:20052471-20052490 | MS.gene83488:intron | 35.0% | |
| ACAACCACTAATGATTGTCT+TGG | - | chr7.1:20051935-20051954 | MS.gene83488:intron | 35.0% | |
| ACACTATAAGTGTGGATAAG+TGG | + | chr7.1:20053160-20053179 | None:intergenic | 35.0% | |
| AGAGGGATGAATTAGGATTT+AGG | + | chr7.1:20050805-20050824 | None:intergenic | 35.0% | |
| AGCATTTGTTCTTGCAAGAA+CGG | + | chr7.1:20051450-20051469 | None:intergenic | 35.0% | |
| AGTCATATTTGGAGATTCCT+GGG | - | chr7.1:20052472-20052491 | MS.gene83488:intron | 35.0% | |
| ATTCCTGGGAATATGATAGT+AGG | - | chr7.1:20052486-20052505 | MS.gene83488:intron | 35.0% | |
| CAAAAAAATAGGCCTCTGAA+AGG | + | chr7.1:20053353-20053372 | None:intergenic | 35.0% | |
| CACTATAAGTGTGGATAAGT+GGG | + | chr7.1:20053159-20053178 | None:intergenic | 35.0% | |
| CATAAATAGGCTGGCATATT+AGG | - | chr7.1:20053654-20053673 | MS.gene83488:intron | 35.0% | |
| GAAATAGATTGCAATGCAGA+AGG | - | chr7.1:20049740-20049759 | MS.gene83488:intron | 35.0% | |
| GAGGGATGAATTAGGATTTA+GGG | + | chr7.1:20050804-20050823 | None:intergenic | 35.0% | |
| GATTCTTGGGTTATGTTAAC+CGG | - | chr7.1:20052190-20052209 | MS.gene83488:intron | 35.0% | |
| GCCTGTTTATTAAAAAGGCT+TGG | + | chr7.1:20053748-20053767 | None:intergenic | 35.0% | |
| GCTCATCCCTGAAAAATATT+TGG | + | chr7.1:20050986-20051005 | None:intergenic | 35.0% | |
| GGCTTCTAGTGAATACAAAT+TGG | - | chr7.1:20049778-20049797 | MS.gene83488:intron | 35.0% | |
| GGTTACAAATTCGTTTGAGA+GGG | + | chr7.1:20050822-20050841 | None:intergenic | 35.0% | |
| GGTTTCCTTAAACATTGCTT+CGG | + | chr7.1:20052220-20052239 | None:intergenic | 35.0% | |
| GTCAAACTTTACTTTCTTCC+CGG | + | chr7.1:20050338-20050357 | None:intergenic | 35.0% | |
| GTCAACTTCATTTGATTGGA+TGG | + | chr7.1:20050870-20050889 | None:intergenic | 35.0% | |
| GTGGATAAGTGGGAAATTTA+AGG | + | chr7.1:20053149-20053168 | None:intergenic | 35.0% | |
| GTTTCCTTAAACATTGCTTC+GGG | + | chr7.1:20052219-20052238 | None:intergenic | 35.0% | |
| TAAAAGAGTGATGCTATTGC+TGG | - | chr7.1:20051055-20051074 | MS.gene83488:intron | 35.0% | |
| TAAGTAAATAGGTGAGGCTT+AGG | + | chr7.1:20053701-20053720 | None:intergenic | 35.0% | |
| TACTATTCAGCATTTCCCTT+CGG | - | chr7.1:20052435-20052454 | MS.gene83488:intron | 35.0% | |
| TCAAACTTTACTTTCTTCCC+GGG | + | chr7.1:20050337-20050356 | None:intergenic | 35.0% | |
| TCATCTTTAATCTTCCAGCA+AGG | + | chr7.1:20049700-20049719 | None:intergenic | 35.0% | |
| TCTCTTTGTGATGTAGATGT+GGG | + | chr7.1:20051416-20051435 | None:intergenic | 35.0% | |
| TGGTTACAAATTCGTTTGAG+AGG | + | chr7.1:20050823-20050842 | None:intergenic | 35.0% | |
| TGTTGGATTGCATACATCTT+TGG | + | chr7.1:20051387-20051406 | None:intergenic | 35.0% | |
| TTCTTATAAATAGGACCGGA+GGG | + | chr7.1:20051736-20051755 | None:intergenic | 35.0% | |
| TTGAAATTAGGGTTGGGAAT+TGG | + | chr7.1:20053826-20053845 | None:intergenic | 35.0% | |
| TTGCATTTAATCCTGAGTCA+TGG | + | chr7.1:20050611-20050630 | None:intergenic | 35.0% | |
| TTTCAATTAGGGTTGGGAAT+AGG | - | chr7.1:20053253-20053272 | MS.gene83488:intron | 35.0% | |
| TTTCCTACTATCATATTCCC+AGG | + | chr7.1:20052492-20052511 | None:intergenic | 35.0% | |
| TTTCCTTAAACATTGCTTCG+GGG | + | chr7.1:20052218-20052237 | None:intergenic | 35.0% | |
| TTTCTTATAAATAGGACCGG+AGG | + | chr7.1:20051737-20051756 | None:intergenic | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | - | chr7.1:20051979-20051998 | MS.gene83488:intron | 35.0% | |
| ! | AAGAAAGTGTGAATGGATCT+AGG | - | chr7.1:20050727-20050746 | MS.gene83488:intron | 35.0% |
| ! | AAGGATGGGAATTTTATTCG+CGG | + | chr7.1:20052715-20052734 | None:intergenic | 35.0% |
| ! | AGCGAATGAATTTTCTTCGT+TGG | - | chr7.1:20051102-20051121 | MS.gene83488:intron | 35.0% |
| ! | GACCCCTTATACTATTGATT+GGG | - | chr7.1:20052788-20052807 | MS.gene83488:intron | 35.0% |
| ! | GCCAAGCCTTTTTAATAAAC+AGG | - | chr7.1:20053744-20053763 | MS.gene83488:CDS | 35.0% |
| ! | GGTTATCCTAATCAAGCTTT+TGG | - | chr7.1:20049818-20049837 | MS.gene83488:intron | 35.0% |
| ! | GTTTGACAAGAAAGTGTGAA+TGG | - | chr7.1:20050720-20050739 | MS.gene83488:intron | 35.0% |
| ! | TCTCGATTTTCACGTGAAAA+CGG | - | chr7.1:20049580-20049599 | MS.gene83488:CDS | 35.0% |
| ! | TGTCTTTTTAATACTCCCTC+CGG | - | chr7.1:20051718-20051737 | MS.gene83488:intron | 35.0% |
| !! | AAAGGAGTATTGATAATCCC+GGG | - | chr7.1:20050317-20050336 | MS.gene83488:intron | 35.0% |
| !! | ACTCCTTTTTGAGAACCAAA+GGG | + | chr7.1:20050305-20050324 | None:intergenic | 35.0% |
| !! | AGACAGTTTTGTCATCAATG+TGG | + | chr7.1:20051703-20051722 | None:intergenic | 35.0% |
| !! | CCCGTCATTAGCTTATTTTT+AGG | - | chr7.1:20050438-20050457 | MS.gene83488:intron | 35.0% |
| !! | TAACCCTTTGGTTCTCAAAA+AGG | - | chr7.1:20050299-20050318 | MS.gene83488:intron | 35.0% |
| !! | TACTCCTTTTTGAGAACCAA+AGG | + | chr7.1:20050306-20050325 | None:intergenic | 35.0% |
| !! | TTTTCTTCGTTGGATTAGGA+TGG | - | chr7.1:20051112-20051131 | MS.gene83488:intron | 35.0% |
| !!! | CTTTCAGAGGCCTATTTTTT+TGG | - | chr7.1:20053351-20053370 | MS.gene83488:intron | 35.0% |
| !!! | TGCAAATTTTTTCATAGGCC+AGG | + | chr7.1:20053310-20053329 | None:intergenic | 35.0% |
| !!! | TGTTTCGACAGTTTTAGGTT+TGG | - | chr7.1:20052908-20052927 | MS.gene83488:intron | 35.0% |
| AACTTCTCGGTCACTATTTG+AGG | + | chr7.1:20049638-20049657 | None:intergenic | 40.0% | |
| ACAAGCCATGCAATCTTTGA+CGG | - | chr7.1:20053950-20053969 | MS.gene83488:CDS | 40.0% | |
| ACTATTCAGCATTTCCCTTC+GGG | - | chr7.1:20052436-20052455 | MS.gene83488:intron | 40.0% | |
| AGGATGGTTAGTGGAATACA+AGG | - | chr7.1:20051128-20051147 | MS.gene83488:intron | 40.0% | |
| AGTGTGCGAGTATAACAACA+AGG | - | chr7.1:20053175-20053194 | MS.gene83488:intron | 40.0% | |
| ATACTCGCACACTATAAGTG+TGG | + | chr7.1:20053168-20053187 | None:intergenic | 40.0% | |
| ATTTGATTGGATGGGAAGAG+TGG | + | chr7.1:20050861-20050880 | None:intergenic | 40.0% | |
| CACATCTACATCACAAAGAG+AGG | - | chr7.1:20051415-20051434 | MS.gene83488:intron | 40.0% | |
| CCACTTCTCTTAACAAGGTT+GGG | + | chr7.1:20051502-20051521 | None:intergenic | 40.0% | |
| CGACCCCTTATACTATTGAT+TGG | - | chr7.1:20052787-20052806 | MS.gene83488:intron | 40.0% | |
| CTCTCTTTGTGATGTAGATG+TGG | + | chr7.1:20051417-20051436 | None:intergenic | 40.0% | |
| CTCTTTGTGATGTAGATGTG+GGG | + | chr7.1:20051415-20051434 | None:intergenic | 40.0% | |
| CTTAGACAACCTTGCTTCAT+TGG | - | chr7.1:20053991-20054010 | MS.gene83488:CDS | 40.0% | |
| GACAAGCCTTGCAATGAAAT+AGG | + | chr7.1:20053499-20053518 | None:intergenic | 40.0% | |
| GCAATCTATTTCCAACCTGT+TGG | + | chr7.1:20049732-20049751 | None:intergenic | 40.0% | |
| GCGGTATATCACCTATCTTA+TGG | + | chr7.1:20049871-20049890 | None:intergenic | 40.0% | |
| GGATGGTTAGTGGAATACAA+GGG | - | chr7.1:20051129-20051148 | MS.gene83488:intron | 40.0% | |
| TAAGTCCGTCAAAGATTGCA+TGG | + | chr7.1:20053958-20053977 | None:intergenic | 40.0% | |
| TAGACAAAGAAAACACGTGC+AGG | + | chr7.1:20052865-20052884 | None:intergenic | 40.0% | |
| TCCACTTCTCTTAACAAGGT+TGG | + | chr7.1:20051503-20051522 | None:intergenic | 40.0% | |
| TCGTTTGAGAGGGATGAATT+AGG | + | chr7.1:20050812-20050831 | None:intergenic | 40.0% | |
| TGTCACAGTCAATTGCATGT+TGG | + | chr7.1:20054020-20054039 | None:intergenic | 40.0% | |
| TTGTTCTTGCAAGAACGGAA+TGG | + | chr7.1:20051445-20051464 | None:intergenic | 40.0% | |
| TTTGATTGGATGGGAAGAGT+GGG | + | chr7.1:20050860-20050879 | None:intergenic | 40.0% | |
| ! | ATTTGGCGATTAATGGATGC+AGG | + | chr7.1:20050244-20050263 | None:intergenic | 40.0% |
| ! | TGCACGTGTTTTCTTTGTCT+AGG | - | chr7.1:20052864-20052883 | MS.gene83488:intron | 40.0% |
| ! | TTTGGCGATTAATGGATGCA+GGG | + | chr7.1:20050243-20050262 | None:intergenic | 40.0% |
| ! | TTTTCCAGCTACTTGCGATT+TGG | - | chr7.1:20052836-20052855 | MS.gene83488:intron | 40.0% |
| !! | AGATGAACTCTGAAACCAAC+AGG | - | chr7.1:20049714-20049733 | MS.gene83488:intron | 40.0% |
| !!! | AGAAGGTGTTGGTTTTGTTG+TGG | - | chr7.1:20049757-20049776 | MS.gene83488:intron | 40.0% |
| AAAATTTGCAAGCCTGAGCC+TGG | - | chr7.1:20053320-20053339 | MS.gene83488:intron | 45.0% | |
| AATCTAGGCCAAGCCTAAAC+AGG | - | chr7.1:20053769-20053788 | MS.gene83488:CDS | 45.0% | |
| AATTAATGCACTCGGAGCAC+TGG | + | chr7.1:20052074-20052093 | None:intergenic | 45.0% | |
| ACCTGGCCTATTTAAAAGCC+TGG | - | chr7.1:20053378-20053397 | MS.gene83488:intron | 45.0% | |
| AGGAGTTGTCTGTCATGGAA+GGG | + | chr7.1:20054043-20054062 | None:intergenic | 45.0% | |
| AGGATTAAACTGGCTAACGG+AGG | + | chr7.1:20050653-20050672 | None:intergenic | 45.0% | |
| AGGCCTGTAAATAGGCTTTC+AGG | + | chr7.1:20053409-20053428 | None:intergenic | 45.0% | |
| AGTGGGAAGAAGAAGGAGAA+TGG | + | chr7.1:20050843-20050862 | None:intergenic | 45.0% | |
| CAGCTAACATCCTTCAAGTG+TGG | - | chr7.1:20053905-20053924 | MS.gene83488:CDS | 45.0% | |
| CATGGATCATTGTGACAGTG+AGG | + | chr7.1:20050593-20050612 | None:intergenic | 45.0% | |
| CCAGGTCAGGCCAAAAAAAT+AGG | + | chr7.1:20053364-20053383 | None:intergenic | 45.0% | |
| CCCAACCTTGTTAAGAGAAG+TGG | - | chr7.1:20051499-20051518 | MS.gene83488:intron | 45.0% | |
| CTAACATCCTTCAAGTGTGG+TGG | - | chr7.1:20053908-20053927 | MS.gene83488:CDS | 45.0% | |
| GACAGTGAGGTGAAAAGTCA+CGG | + | chr7.1:20050580-20050599 | None:intergenic | 45.0% | |
| GCTGGCATATTAGGCTTCAT+AGG | - | chr7.1:20053663-20053682 | MS.gene83488:intron | 45.0% | |
| GGTTAGTGGAATACAAGGGT+GGG | - | chr7.1:20051133-20051152 | MS.gene83488:intron | 45.0% | |
| GTAGCTTATGACTTCCTTGC+TGG | - | chr7.1:20049683-20049702 | MS.gene83488:intron | 45.0% | |
| GTCACAATGATCCATGACTC+AGG | - | chr7.1:20050597-20050616 | MS.gene83488:intron | 45.0% | |
| TACAAAAGACGCACAGAGCA+AGG | + | chr7.1:20052981-20053000 | None:intergenic | 45.0% | |
| TATACCGCTATGTGTTGTCC+AGG | - | chr7.1:20049883-20049902 | MS.gene83488:intron | 45.0% | |
| TCTCGGTCACTATTTGAGGA+GGG | + | chr7.1:20049634-20049653 | None:intergenic | 45.0% | |
| TCTCTTAACAAGGTTGGGCT+GGG | + | chr7.1:20051497-20051516 | None:intergenic | 45.0% | |
| TGGCCTGAAAGCCTATTTAC+AGG | - | chr7.1:20053403-20053422 | MS.gene83488:intron | 45.0% | |
| TGGTTAGTGGAATACAAGGG+TGG | - | chr7.1:20051132-20051151 | MS.gene83488:intron | 45.0% | |
| TGTAAATAGGCTTTCAGGCC+AGG | + | chr7.1:20053404-20053423 | None:intergenic | 45.0% | |
| TGTACCTGGACAACACATAG+CGG | + | chr7.1:20049890-20049909 | None:intergenic | 45.0% | |
| TGTTTAGGCTTGGCCTAGAT+TGG | + | chr7.1:20053770-20053789 | None:intergenic | 45.0% | |
| TTCTCGGTCACTATTTGAGG+AGG | + | chr7.1:20049635-20049654 | None:intergenic | 45.0% | |
| TTCTCTTAACAAGGTTGGGC+TGG | + | chr7.1:20051498-20051517 | None:intergenic | 45.0% | |
| TTGAAACAAACGCTCCCGAA+GGG | + | chr7.1:20052453-20052472 | None:intergenic | 45.0% | |
| TTGTGATGTAGATGTGGGGA+AGG | + | chr7.1:20051411-20051430 | None:intergenic | 45.0% | |
| ! | CGTTGGATTAGGATGGTTAG+TGG | - | chr7.1:20051119-20051138 | MS.gene83488:intron | 45.0% |
| ! | GATTGCAATGCAGAAGGTGT+TGG | - | chr7.1:20049746-20049765 | MS.gene83488:intron | 45.0% |
| ! | GCTTTTAAATAGGCCAGGTC+AGG | + | chr7.1:20053377-20053396 | None:intergenic | 45.0% |
| ! | TTGATTGGGTTTGGGACGTT+TGG | - | chr7.1:20052802-20052821 | MS.gene83488:intron | 45.0% |
| !! | GAACTCTGAAACCAACAGGT+TGG | - | chr7.1:20049718-20049737 | MS.gene83488:intron | 45.0% |
| !! | TGTTGGTAGCCAATGAAGCA+AGG | + | chr7.1:20054003-20054022 | None:intergenic | 45.0% |
| !!! | CCTATTTTTTTGGCCTGACC+TGG | - | chr7.1:20053361-20053380 | MS.gene83488:intron | 45.0% |
| !!! | TTTTTTCATAGGCCAGGCTC+AGG | + | chr7.1:20053304-20053323 | None:intergenic | 45.0% |
| !!! | AAAAAAGATATTTAATTTTT+TGG | - | chr7.1:20053208-20053227 | MS.gene83488:intron | 5.0% |
| !!! | AAATTTTCAAAAAAAAAATT+TGG | - | chr7.1:20051755-20051774 | MS.gene83488:intron | 5.0% |
| !!! | AATTTTTAAAATTTTATTCA+TGG | - | chr7.1:20052535-20052554 | MS.gene83488:intron | 5.0% |
| !!! | ATTAAAGTAATTATTTTAAA+AGG | + | chr7.1:20052405-20052424 | None:intergenic | 5.0% |
| !!! | ATTTTTAAAATTTTATTCAT+GGG | - | chr7.1:20052536-20052555 | MS.gene83488:intron | 5.0% |
| AAGTGTGGTGGTCTCGCAAT+AGG | - | chr7.1:20053920-20053939 | MS.gene83488:CDS | 50.0% | |
| AGACCAGATCGCTGCTATCA+AGG | - | chr7.1:20050921-20050940 | MS.gene83488:intron | 50.0% | |
| AGGCCAGACCAGACTTTGAT+AGG | - | chr7.1:20053278-20053297 | MS.gene83488:intron | 50.0% | |
| AGGCCTATCAAAGTCTGGTC+TGG | + | chr7.1:20053284-20053303 | None:intergenic | 50.0% | |
| ATTAGGGTTGGGAATAGGCC+AGG | - | chr7.1:20053258-20053277 | MS.gene83488:intron | 50.0% | |
| ATTAGGGTTGGGAATTGGCG+AGG | + | chr7.1:20053821-20053840 | None:intergenic | 50.0% | |
| CAGGAGTTGTCTGTCATGGA+AGG | + | chr7.1:20054044-20054063 | None:intergenic | 50.0% | |
| CTTCCATGACAGACAACTCC+TGG | - | chr7.1:20054042-20054061 | MS.gene83488:CDS | 50.0% | |
| CTTGAAACAAACGCTCCCGA+AGG | + | chr7.1:20052454-20052473 | None:intergenic | 50.0% | |
| GACACCAAATCGCAAGTAGC+TGG | + | chr7.1:20052843-20052862 | None:intergenic | 50.0% | |
| GCCTATTTAAAAGCCTGGCC+TGG | - | chr7.1:20053383-20053402 | MS.gene83488:intron | 50.0% | |
| GTGCCCCGAAGCAATGTTTA+AGG | - | chr7.1:20052212-20052231 | MS.gene83488:intron | 50.0% | |
| TAAACATTGCTTCGGGGCAC+CGG | + | chr7.1:20052212-20052231 | None:intergenic | 50.0% | |
| TATCAAAGTCTGGTCTGGCC+TGG | + | chr7.1:20053279-20053298 | None:intergenic | 50.0% | |
| TGGGAAGAGTGGGAAGAAGA+AGG | + | chr7.1:20050850-20050869 | None:intergenic | 50.0% | |
| TGGGGAAGTTGACATGTGGA+GGG | + | chr7.1:20054078-20054097 | None:intergenic | 50.0% | |
| ! | ATAGGCCTCTGAAAGGCCAT+AGG | + | chr7.1:20053346-20053365 | None:intergenic | 50.0% |
| ! | CATCCTTGATAGCAGCGATC+TGG | + | chr7.1:20050927-20050946 | None:intergenic | 50.0% |
| ! | CTAACGGAGGTACACATCCA+GGG | + | chr7.1:20050640-20050659 | None:intergenic | 50.0% |
| ! | GCCAGGCCAGGCTTTTAAAT+AGG | + | chr7.1:20053387-20053406 | None:intergenic | 50.0% |
| ! | GCCAGGCTTTTAAATAGGCC+AGG | + | chr7.1:20053382-20053401 | None:intergenic | 50.0% |
| ! | TGGGCTGGGTATGTGTCTTA+GGG | + | chr7.1:20051483-20051502 | None:intergenic | 50.0% |
| ! | TTGGGCTGGGTATGTGTCTT+AGG | + | chr7.1:20051484-20051503 | None:intergenic | 50.0% |
| AGGGTGGGGAAGTTGACATG+TGG | + | chr7.1:20054082-20054101 | None:intergenic | 55.0% | |
| CAGCCAGGAGTTGTCTGTCA+TGG | + | chr7.1:20054048-20054067 | None:intergenic | 55.0% | |
| GACTTTGATAGGCCTGAGCC+TGG | - | chr7.1:20053289-20053308 | MS.gene83488:intron | 55.0% | |
| GGCTCAGGCCTATCAAAGTC+TGG | + | chr7.1:20053289-20053308 | None:intergenic | 55.0% | |
| GGGGAAGTTGACATGTGGAG+GGG | + | chr7.1:20054077-20054096 | None:intergenic | 55.0% | |
| GTAGATGTGGGGAAGGCTGT+TGG | + | chr7.1:20051404-20051423 | None:intergenic | 55.0% | |
| GTGGGGAAGTTGACATGTGG+AGG | + | chr7.1:20054079-20054098 | None:intergenic | 55.0% | |
| TGCGAGACCACCACACTTGA+AGG | + | chr7.1:20053918-20053937 | None:intergenic | 55.0% | |
| ! | GCTAACGGAGGTACACATCC+AGG | + | chr7.1:20050641-20050660 | None:intergenic | 55.0% |
| ! | TTGGGTTTGGGACGTTTGGC+TGG | - | chr7.1:20052806-20052825 | MS.gene83488:intron | 55.0% |
| AAAGGCCATAGGCCAGGCTC+AGG | + | chr7.1:20053335-20053354 | None:intergenic | 60.0% | |
| AGGCCAAGCCTAAACAGGCC+AGG | - | chr7.1:20053774-20053793 | MS.gene83488:CDS | 60.0% | |
| ATAGGCTTTCAGGCCAGGCC+AGG | + | chr7.1:20053399-20053418 | None:intergenic | 60.0% | |
| CCTGGCCTATGGCCTTTCAG+AGG | - | chr7.1:20053338-20053357 | MS.gene83488:intron | 60.0% | |
| ! | CCTCTGAAAGGCCATAGGCC+AGG | + | chr7.1:20053341-20053360 | None:intergenic | 60.0% |
| CGGCCTGGCCTGTTTAGGCT+TGG | + | chr7.1:20053780-20053799 | None:intergenic | 65.0% | |
| GCAAGCCTGAGCCTGGCCTA+TGG | - | chr7.1:20053327-20053346 | MS.gene83488:intron | 65.0% | |
| GCCTAAACAGGCCAGGCCGT+AGG | - | chr7.1:20053781-20053800 | MS.gene83488:CDS | 65.0% | |
| GCCTACGGCCTGGCCTGTTT+AGG | + | chr7.1:20053785-20053804 | None:intergenic | 65.0% | |
| GGGTTGGGAATTGGCGAGGC+CGG | + | chr7.1:20053817-20053836 | None:intergenic | 65.0% | |
| GCCAGGCCGTAGGCCACTGT+AGG | - | chr7.1:20053791-20053810 | MS.gene83488:CDS | 70.0% | |
| GCCTACAGTGGCCTACGGCC+TGG | + | chr7.1:20053795-20053814 | None:intergenic | 70.0% | |
| GGCCGGCCTACAGTGGCCTA+CGG | + | chr7.1:20053800-20053819 | None:intergenic | 70.0% | |
| GGCCGTAGGCCACTGTAGGC+CGG | - | chr7.1:20053795-20053814 | MS.gene83488:CDS | 70.0% | |
| GTGGAGGGGATCGTGCAGCC+AGG | + | chr7.1:20054063-20054082 | None:intergenic | 70.0% | |
| TTGGCGAGGCCGGCCTACAG+TGG | + | chr7.1:20053807-20053826 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 20049491 | 20054108 | 20049491 | ID=MS.gene83488 |
| chr7.1 | mRNA | 20049491 | 20054108 | 20049491 | ID=MS.gene83488.t1;Parent=MS.gene83488 |
| chr7.1 | exon | 20053695 | 20054108 | 20053695 | ID=MS.gene83488.t1.exon1;Parent=MS.gene83488.t1 |
| chr7.1 | CDS | 20053695 | 20054108 | 20053695 | ID=cds.MS.gene83488.t1;Parent=MS.gene83488.t1 |
| chr7.1 | exon | 20049491 | 20049691 | 20049491 | ID=MS.gene83488.t1.exon2;Parent=MS.gene83488.t1 |
| chr7.1 | CDS | 20049491 | 20049691 | 20049491 | ID=cds.MS.gene83488.t1;Parent=MS.gene83488.t1 |
| Gene Sequence |
| Protein sequence |
