Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83491.t1 | XP_003612481.2 | 74.8 | 436 | 54 | 5 | 1 | 401 | 1 | 415 | 5.80E-168 | 600.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83491.t1 | Q922Q9 | 32.1 | 352 | 170 | 14 | 76 | 403 | 69 | 375 | 2.7e-36 | 154.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83491.t1 | G7K407 | 74.8 | 436 | 54 | 5 | 1 | 401 | 1 | 415 | 4.2e-168 | 600.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053541 | MS.gene83491 | 0.801565 | 8.48E-49 | -1.69E-46 |
| MS.gene053542 | MS.gene83491 | 0.807292 | 5.43E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene83491 | 0.80445 | 2.15E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83491.t1 | MTR_5g025480 | 74.260 | 439 | 57 | 5 | 1 | 404 | 1 | 418 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83491.t1 | AT4G01040 | 57.759 | 348 | 110 | 5 | 71 | 404 | 87 | 411 | 1.18e-132 | 388 |
| MS.gene83491.t1 | AT4G01040 | 57.429 | 350 | 110 | 6 | 71 | 404 | 87 | 413 | 3.31e-132 | 387 |
Find 99 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAAAGTCTCAAGATCTTT+TGG | 0.207018 | 5.4:-16568624 | None:intergenic |
| CATTGCCCCAAGATATTTCT+TGG | 0.210614 | 5.4:+16568785 | MS.gene83491:CDS |
| TTTCTTGGCATCAACTTCTA+TGG | 0.245709 | 5.4:+16568800 | MS.gene83491:CDS |
| AATATCTTGGGGCAATGTTT+TGG | 0.262487 | 5.4:-16568779 | None:intergenic |
| GAGAGATTACCTAGCACTTT+TGG | 0.270900 | 5.4:+16568958 | MS.gene83491:CDS |
| TTCGGTGGTGGACCTATTAT+TGG | 0.275640 | 5.4:+16568936 | MS.gene83491:CDS |
| TGGAATGTGGCATCTCGATA+TGG | 0.295682 | 5.4:+16569121 | MS.gene83491:CDS |
| ATTATTCTACAGATCCTTCT+TGG | 0.300869 | 5.4:+16568735 | MS.gene83491:CDS |
| GATCTTGCCTAGAGTTGTTC+TGG | 0.307883 | 5.4:+16567223 | MS.gene83491:intron |
| GTCAATTTCTTTGCGGTTAG+AGG | 0.310556 | 5.4:+16569087 | MS.gene83491:CDS |
| TTGCAGTTGGTCTATGTTAT+AGG | 0.310790 | 5.4:+16568561 | MS.gene83491:CDS |
| TGATCCAAGCATGCGGAATT+TGG | 0.332644 | 5.4:+16568032 | MS.gene83491:CDS |
| TGGTCAAGGTGGGCGGCTTA+TGG | 0.342170 | 5.4:+16568000 | MS.gene83491:intron |
| GTCCGAATGCACCTTTGAAA+TGG | 0.376318 | 5.4:+16568706 | MS.gene83491:CDS |
| CCAACAGACTAGCTTAGTTC+TGG | 0.388020 | 5.4:+16566422 | MS.gene83491:CDS |
| TCGCCGTCGTCGTCGCTTAC+CGG | 0.388384 | 5.4:+16564575 | MS.gene83491:CDS |
| GGCATCTCGATATGGGAAAT+TGG | 0.389890 | 5.4:+16569129 | MS.gene83491:CDS |
| GTTGATGCCAAGAAATATCT+TGG | 0.401904 | 5.4:-16568792 | None:intergenic |
| GTTGTGAAGATGTGTTGATT+TGG | 0.403089 | 5.4:-16564477 | None:intergenic |
| ACTTTAAGTGAAGCTGTTGA+TGG | 0.404454 | 5.4:+16568639 | MS.gene83491:CDS |
| ACTTGCACTCTGTCACTATA+AGG | 0.409580 | 5.4:-16567301 | None:intergenic |
| ATCCATTTCAAAGGTGCATT+CGG | 0.421328 | 5.4:-16568708 | None:intergenic |
| CTTTAAAGTCAATTTCTTTG+CGG | 0.425068 | 5.4:+16569080 | MS.gene83491:CDS |
| CACCGGTCATCCCAGAGTTC+CGG | 0.429123 | 5.4:+16564442 | MS.gene83491:CDS |
| TGCTGACAGAGGATGGATCT+TGG | 0.437854 | 5.4:+16566458 | MS.gene83491:CDS |
| TTCAAAGGTGCATTCGGACC+AGG | 0.441149 | 5.4:-16568702 | None:intergenic |
| CTCACCAAATTCCGCATGCT+TGG | 0.448613 | 5.4:-16568036 | None:intergenic |
| ACTCACTCCGCCTCACCTTC+CGG | 0.454664 | 5.4:+16564511 | MS.gene83491:CDS |
| CGTTATGAATATCCCGTACT+TGG | 0.458363 | 5.4:+16564830 | MS.gene83491:CDS |
| GAATTCTCATGGTTATGAAA+TGG | 0.459484 | 5.4:+16565916 | MS.gene83491:CDS |
| AAAGAAATTGACTTTAAAGA+TGG | 0.462779 | 5.4:-16569076 | None:intergenic |
| TTACACATTTGTCACCTGTC+TGG | 0.470646 | 5.4:+16565960 | MS.gene83491:CDS |
| GGTTAGAGGAAGCCCGTTCA+TGG | 0.471146 | 5.4:+16569101 | MS.gene83491:CDS |
| AGATGCCACATTCCATGAAC+GGG | 0.474632 | 5.4:-16569113 | None:intergenic |
| TTGATGCCAAGAAATATCTT+GGG | 0.477177 | 5.4:-16568791 | None:intergenic |
| TAGGTAATCTCTCCAATAAT+AGG | 0.479459 | 5.4:-16568948 | None:intergenic |
| AATGATTTCTCCCTTTCAAA+GGG | 0.484485 | 5.4:+16568824 | MS.gene83491:CDS |
| CTTCGACTTACCCTTTGAAA+GGG | 0.490632 | 5.4:-16568834 | None:intergenic |
| GACCGGAACTCTGGGATGAC+CGG | 0.492025 | 5.4:-16564444 | None:intergenic |
| GCGGAGTGAGTGAGTTGGTC+TGG | 0.493078 | 5.4:-16564499 | None:intergenic |
| TTTCCGGTGACCGGAACTCT+GGG | 0.494282 | 5.4:-16564452 | None:intergenic |
| CTCTGTCACTATAAGGTCAA+TGG | 0.496064 | 5.4:-16567294 | None:intergenic |
| AAATGATTTCTCCCTTTCAA+AGG | 0.497511 | 5.4:+16568823 | MS.gene83491:CDS |
| TTGCAGTTTGTAAAACAGCT+TGG | 0.503858 | 5.4:+16568492 | MS.gene83491:CDS |
| TGTAAGTGCAGGTTCGGTGG+TGG | 0.507757 | 5.4:+16568924 | MS.gene83491:intron |
| GGAATGTGGCATCTCGATAT+GGG | 0.507910 | 5.4:+16569122 | MS.gene83491:CDS |
| GACATAATGCTGACAGAGGA+TGG | 0.512837 | 5.4:+16566451 | MS.gene83491:CDS |
| ATAATTTGAATCCATTTCAA+AGG | 0.517788 | 5.4:-16568717 | None:intergenic |
| ATGGTTATGAAATGGCGAAA+AGG | 0.522806 | 5.4:+16565924 | MS.gene83491:CDS |
| TCTTCGACTTACCCTTTGAA+AGG | 0.525084 | 5.4:-16568835 | None:intergenic |
| AAACTGCAAGCACATGACTT+TGG | 0.529542 | 5.4:+16568600 | MS.gene83491:CDS |
| TGCCTTCTTCATCCTATCGT+CGG | 0.534567 | 5.4:+16564549 | MS.gene83491:CDS |
| AGGGAGTATGTATCCAAGTA+CGG | 0.535960 | 5.4:-16564843 | None:intergenic |
| GAAGGAGAAGATGTCTGAAC+CGG | 0.536794 | 5.4:-16564594 | None:intergenic |
| TCACTATAAGGTCAATGGCT+TGG | 0.536842 | 5.4:-16567289 | None:intergenic |
| TGCAGTGGGATAAGAACAGT+GGG | 0.538664 | 5.4:+16568999 | MS.gene83491:CDS |
| TTCTTATCCCACTGCAGAGT+AGG | 0.541418 | 5.4:-16568992 | None:intergenic |
| ATACGATTCGTGCTTTGCGA+AGG | 0.546827 | 5.4:-16564612 | None:intergenic |
| CATCCCAGAGTTCCGGTCAC+CGG | 0.549344 | 5.4:+16564449 | MS.gene83491:CDS |
| ATTCTACAGATCCTTCTTGG+TGG | 0.549796 | 5.4:+16568738 | MS.gene83491:CDS |
| TTATTGTGGCAGAATTCTCA+TGG | 0.551792 | 5.4:+16565905 | MS.gene83491:CDS |
| GCTTGCAGTTTCTCAGAAGA+TGG | 0.558275 | 5.4:-16568588 | None:intergenic |
| CTGTCTGGTATGATTTAAAG+AGG | 0.558349 | 5.4:+16565975 | MS.gene83491:CDS |
| GATGCTTCCAGAACAACTCT+AGG | 0.568386 | 5.4:-16567230 | None:intergenic |
| GGGAGTATGTATCCAAGTAC+GGG | 0.572485 | 5.4:-16564842 | None:intergenic |
| CTCTTTAAATCATACCAGAC+AGG | 0.573569 | 5.4:-16565974 | None:intergenic |
| TTTGATGGCACCGGAAGGTG+AGG | 0.574201 | 5.4:-16564521 | None:intergenic |
| TTAGGAGAACATGAAAGTAT+CGG | 0.578042 | 5.4:+16564790 | MS.gene83491:intron |
| CACCGACGATAGGATGAAGA+AGG | 0.578288 | 5.4:-16564551 | None:intergenic |
| TCAAAGGTGCATTCGGACCA+GGG | 0.583617 | 5.4:-16568701 | None:intergenic |
| TGTGCTTCTCCAAAAGTGCT+AGG | 0.586951 | 5.4:-16568967 | None:intergenic |
| ACAGACTAGCTTAGTTCTGG+AGG | 0.598297 | 5.4:+16566425 | MS.gene83491:CDS |
| CAGACTAGCTTAGTTCTGGA+GGG | 0.598632 | 5.4:+16566426 | MS.gene83491:CDS |
| TCGATATGGGAAATTGGTCA+AGG | 0.600420 | 5.4:+16569135 | MS.gene83491:CDS |
| GATGGCACCGGAAGGTGAGG+CGG | 0.600765 | 5.4:-16564518 | None:intergenic |
| TGCAGTTTCTCAGAAGATGG+TGG | 0.602504 | 5.4:-16568585 | None:intergenic |
| TAGTGAACAGAAGTTGCAGT+TGG | 0.603856 | 5.4:+16568548 | MS.gene83491:CDS |
| TGGCAGAGGCACCACCAAGA+AGG | 0.604961 | 5.4:-16568749 | None:intergenic |
| GCATTCGGACCAGGGTTGTG+AGG | 0.607965 | 5.4:-16568693 | None:intergenic |
| CGACGGCGATCACCGACGAT+AGG | 0.608823 | 5.4:-16564561 | None:intergenic |
| CCAGAACTAAGCTAGTCTGT+TGG | 0.609121 | 5.4:-16566422 | None:intergenic |
| GCACAGACCTACTCTGCAGT+GGG | 0.619522 | 5.4:+16568985 | MS.gene83491:CDS |
| AGACTAGCTTAGTTCTGGAG+GGG | 0.620148 | 5.4:+16566427 | MS.gene83491:CDS |
| GAGATGCCACATTCCATGAA+CGG | 0.620611 | 5.4:-16569114 | None:intergenic |
| GTACTTGGATACATACTCCC+TGG | 0.620776 | 5.4:+16564845 | MS.gene83491:CDS |
| AGCACAGACCTACTCTGCAG+TGG | 0.623762 | 5.4:+16568984 | MS.gene83491:CDS |
| GGAAGCCCGTTCATGGAATG+TGG | 0.627887 | 5.4:+16569108 | MS.gene83491:CDS |
| GTGAGGCGGAGTGAGTGAGT+TGG | 0.645229 | 5.4:-16564504 | None:intergenic |
| TGAATCTTGGTCAAGGTGGG+CGG | 0.646265 | 5.4:+16567993 | MS.gene83491:intron |
| GGGAGACATAATGCTGACAG+AGG | 0.650124 | 5.4:+16566447 | MS.gene83491:CDS |
| ATTTGTAAGTGCAGGTTCGG+TGG | 0.652869 | 5.4:+16568921 | MS.gene83491:intron |
| TGATGCCAAGAAATATCTTG+GGG | 0.663397 | 5.4:-16568790 | None:intergenic |
| CGAAGAAGCGAGATCAACAC+CGG | 0.671797 | 5.4:+16564425 | MS.gene83491:CDS |
| CTGCAGTGGGATAAGAACAG+TGG | 0.679807 | 5.4:+16568998 | MS.gene83491:CDS |
| TGACAATGATATCAAGCATG+CGG | 0.681686 | 5.4:+16569045 | MS.gene83491:CDS |
| GAACCGGTAAGCGACGACGA+CGG | 0.706077 | 5.4:-16564578 | None:intergenic |
| TCTTGCGTGATCCAAGCATG+CGG | 0.717581 | 5.4:+16568025 | MS.gene83491:CDS |
| TATCGGAAAATGTTTCTATG+CGG | 0.753924 | 5.4:+16564807 | MS.gene83491:CDS |
| GCAGTGGGATAAGAACAGTG+GGG | 0.846336 | 5.4:+16569000 | MS.gene83491:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATTTCTAATTATGAAA+TGG | - | chr5.4:16566750-16566769 | None:intergenic | 10.0% |
| !! | TAATATAATAAACAATTGTT+AGG | - | chr5.4:16567130-16567149 | None:intergenic | 10.0% |
| !!! | ACAAATTTTAATTGATATAT+TGG | - | chr5.4:16566848-16566867 | None:intergenic | 10.0% |
| !! | ACATGTAATAGAAAAAATAA+TGG | - | chr5.4:16567202-16567221 | None:intergenic | 15.0% |
| !! | ATCTTCAAAAATATTTATTG+TGG | + | chr5.4:16565891-16565910 | MS.gene83491:CDS | 15.0% |
| !!! | AATTTTAATTGATATATTGG+AGG | - | chr5.4:16566845-16566864 | None:intergenic | 15.0% |
| !!! | CTAAATATGCTATAAATTTT+TGG | - | chr5.4:16566126-16566145 | None:intergenic | 15.0% |
| !!! | GTTTTTATTATATTGCTTTA+TGG | + | chr5.4:16566372-16566391 | MS.gene83491:intron | 15.0% |
| !!! | TCAAATTTTAATTGCTAAAT+TGG | - | chr5.4:16566889-16566908 | None:intergenic | 15.0% |
| !!! | TTTTTCAAAATAAGTCATTT+AGG | - | chr5.4:16566014-16566033 | None:intergenic | 15.0% |
| !! | AAAGCTATATATTTAACATG+AGG | - | chr5.4:16565852-16565871 | None:intergenic | 20.0% |
| !! | AATATAACTATCCTAATGTT+AGG | - | chr5.4:16565757-16565776 | None:intergenic | 20.0% |
| !! | AATTACCAATTCTTAGAATT+TGG | - | chr5.4:16565192-16565211 | None:intergenic | 20.0% |
| !! | ATAATTTGAATCCATTTCAA+AGG | - | chr5.4:16568720-16568739 | None:intergenic | 20.0% |
| !! | ATTACAATAATTAGTTACAC+CGG | + | chr5.4:16564958-16564977 | MS.gene83491:intron | 20.0% |
| !! | ATTACCAATTCTTAGAATTT+GGG | - | chr5.4:16565191-16565210 | None:intergenic | 20.0% |
| !! | CTCAAATAAAGCAAATAAAA+CGG | + | chr5.4:16565602-16565621 | MS.gene83491:intron | 20.0% |
| !! | TTGTGAATTTACTATGAATT+AGG | + | chr5.4:16564772-16564791 | MS.gene83491:intron | 20.0% |
| !! | TTTATGTGAAATTACTCAAA+AGG | + | chr5.4:16567555-16567574 | MS.gene83491:intron | 20.0% |
| !!! | AAAAGCATACAAATAATACT+CGG | - | chr5.4:16567154-16567173 | None:intergenic | 20.0% |
| !!! | AAAGAAATTGACTTTAAAGA+TGG | - | chr5.4:16569079-16569098 | None:intergenic | 20.0% |
| !!! | AATTTTAATTGCTAAATTGG+AGG | - | chr5.4:16566886-16566905 | None:intergenic | 20.0% |
| !!! | CTTATAAGTTTTTTTGAACA+AGG | - | chr5.4:16565438-16565457 | None:intergenic | 20.0% |
| !!! | GTAATAGAAAAAATAATGGA+AGG | - | chr5.4:16567198-16567217 | None:intergenic | 20.0% |
| !!! | TAATGATTCTTTTTCCTTTT+TGG | + | chr5.4:16565679-16565698 | MS.gene83491:intron | 20.0% |
| !!! | TATTTTGAAAAATAGAGGAT+GGG | + | chr5.4:16566022-16566041 | MS.gene83491:intron | 20.0% |
| !!! | TGACTTATTTTGAAAAATAG+AGG | + | chr5.4:16566017-16566036 | MS.gene83491:intron | 20.0% |
| !!! | TTATTTTGAAAAATAGAGGA+TGG | + | chr5.4:16566021-16566040 | MS.gene83491:intron | 20.0% |
| !!! | TTGATATCAGGATTTTTTTA+TGG | + | chr5.4:16567843-16567862 | MS.gene83491:intron | 20.0% |
| !!! | TTGCTTATTCTTTAAGTTTA+GGG | + | chr5.4:16568224-16568243 | MS.gene83491:intron | 20.0% |
| ! | AAAAAGAATCATTAACCAAC+TGG | - | chr5.4:16565673-16565692 | None:intergenic | 25.0% |
| ! | AAATAAAACCATTGCCTTAA+AGG | - | chr5.4:16567351-16567370 | None:intergenic | 25.0% |
| ! | AATTACATACACGTTAGAAT+AGG | - | chr5.4:16566288-16566307 | None:intergenic | 25.0% |
| ! | ACTAGAAAGTAGAGATAATT+AGG | + | chr5.4:16566656-16566675 | MS.gene83491:intron | 25.0% |
| ! | ATATACTCATTGATAAATCC+TGG | + | chr5.4:16566332-16566351 | MS.gene83491:intron | 25.0% |
| ! | ATCCAAAATTAAGAATGTCA+TGG | - | chr5.4:16566630-16566649 | None:intergenic | 25.0% |
| ! | ATGTCGTATTAGAAAAAAGA+AGG | - | chr5.4:16566182-16566201 | None:intergenic | 25.0% |
| ! | CAACATATGATAATCAGATA+CGG | - | chr5.4:16567457-16567476 | None:intergenic | 25.0% |
| ! | CTAGAAAGTAGAGATAATTA+GGG | + | chr5.4:16566657-16566676 | MS.gene83491:intron | 25.0% |
| ! | TAACTAACTAACTAACTAAC+CGG | - | chr5.4:16564980-16564999 | None:intergenic | 25.0% |
| ! | TATACTCATTGATAAATCCT+GGG | + | chr5.4:16566333-16566352 | MS.gene83491:intron | 25.0% |
| ! | TATAGTGTGCAAATACAAAA+TGG | - | chr5.4:16568433-16568452 | None:intergenic | 25.0% |
| ! | TGCTCAAGTATAAAATTAAG+AGG | - | chr5.4:16565373-16565392 | None:intergenic | 25.0% |
| ! | TGGTTAATTAAGTTAACCAA+TGG | - | chr5.4:16567676-16567695 | None:intergenic | 25.0% |
| ! | TGTTGAGAAAAAAGAAACAA+AGG | + | chr5.4:16567264-16567283 | MS.gene83491:CDS | 25.0% |
| ! | TTAAGTAATGTGAACCAAAA+AGG | - | chr5.4:16565696-16565715 | None:intergenic | 25.0% |
| ! | TTCAATGTAATCATATGTGT+AGG | - | chr5.4:16565098-16565117 | None:intergenic | 25.0% |
| !! | AAAATAATGGAAGGTTCATT+AGG | - | chr5.4:16567189-16567208 | None:intergenic | 25.0% |
| !! | GCATTTTATGTGTTACATAT+TGG | + | chr5.4:16568894-16568913 | MS.gene83491:intron | 25.0% |
| !! | GTTGCTTATTCTTTAAGTTT+AGG | + | chr5.4:16568223-16568242 | MS.gene83491:intron | 25.0% |
| !! | TAATAATTTTTCCTTCCCAA+TGG | + | chr5.4:16567072-16567091 | MS.gene83491:intron | 25.0% |
| !! | TATTTTGTGATACACCTTTA+AGG | + | chr5.4:16567334-16567353 | MS.gene83491:intron | 25.0% |
| !! | TGTATGCTTTTCTTTAGATA+TGG | + | chr5.4:16567163-16567182 | MS.gene83491:intron | 25.0% |
| !!! | AAGGCAATGGTTTTATTTTA+TGG | + | chr5.4:16567353-16567372 | MS.gene83491:intron | 25.0% |
| !!! | AGTCAGTTTATTTTGTGTTA+GGG | - | chr5.4:16565584-16565603 | None:intergenic | 25.0% |
| !!! | ATTTTGAAAAATAGAGGATG+GGG | + | chr5.4:16566023-16566042 | MS.gene83491:intron | 25.0% |
| !!! | CTTTAAAGTCAATTTCTTTG+CGG | + | chr5.4:16569080-16569099 | MS.gene83491:CDS | 25.0% |
| !!! | GTTAAATTTTTGAGTTTACG+AGG | + | chr5.4:16568163-16568182 | MS.gene83491:intron | 25.0% |
| AAAATTATTAGCTAGTCCCA+AGG | - | chr5.4:16567062-16567081 | None:intergenic | 30.0% | |
| AAATATTCTGCTGACACTTA+AGG | - | chr5.4:16566265-16566284 | None:intergenic | 30.0% | |
| AAATGATTTCTCCCTTTCAA+AGG | + | chr5.4:16568823-16568842 | MS.gene83491:CDS | 30.0% | |
| AACAAAAAACAAAGCATACC+AGG | - | chr5.4:16564866-16564885 | None:intergenic | 30.0% | |
| AATGATTTCTCCCTTTCAAA+GGG | + | chr5.4:16568824-16568843 | MS.gene83491:CDS | 30.0% | |
| ACAAAAAACAAAGCATACCA+GGG | - | chr5.4:16564865-16564884 | None:intergenic | 30.0% | |
| ACAAAACAGAATTGTCTTAC+AGG | - | chr5.4:16568337-16568356 | None:intergenic | 30.0% | |
| AGTTAGTTAGTTAGTTAGTG+AGG | + | chr5.4:16564983-16565002 | MS.gene83491:intron | 30.0% | |
| ATACTCATTGATAAATCCTG+GGG | + | chr5.4:16566334-16566353 | MS.gene83491:intron | 30.0% | |
| ATATCCTATTCCTAAAAGGT+AGG | - | chr5.4:16566215-16566234 | None:intergenic | 30.0% | |
| ATATCTTAGTGATCTGTAAG+AGG | + | chr5.4:16568249-16568268 | MS.gene83491:intron | 30.0% | |
| ATGTCATTAAGCAAAACCAT+TGG | + | chr5.4:16567657-16567676 | MS.gene83491:intron | 30.0% | |
| ATTATTCTACAGATCCTTCT+TGG | + | chr5.4:16568735-16568754 | MS.gene83491:CDS | 30.0% | |
| CATGTTAATGATATCATCCA+AGG | - | chr5.4:16567102-16567121 | None:intergenic | 30.0% | |
| CTAACTCAACATTACAAAAC+TGG | - | chr5.4:16565013-16565032 | None:intergenic | 30.0% | |
| CTAATAAAATGAAACGAGGA+GGG | - | chr5.4:16566077-16566096 | None:intergenic | 30.0% | |
| CTTGATATCCTATTCCTAAA+AGG | - | chr5.4:16566219-16566238 | None:intergenic | 30.0% | |
| GAATAAGCAACTGAAATTTG+TGG | - | chr5.4:16568214-16568233 | None:intergenic | 30.0% | |
| GAATTCTCATGGTTATGAAA+TGG | + | chr5.4:16565916-16565935 | MS.gene83491:CDS | 30.0% | |
| GCCATGGTTAAAAGAATTAT+TGG | - | chr5.4:16567737-16567756 | None:intergenic | 30.0% | |
| GTTAGTTAGTTAGTTAGTGA+GGG | + | chr5.4:16564984-16565003 | MS.gene83491:intron | 30.0% | |
| TAGGTAATCTCTCCAATAAT+AGG | - | chr5.4:16568951-16568970 | None:intergenic | 30.0% | |
| TATAAAACACGTGTAAAGAC+TGG | - | chr5.4:16566580-16566599 | None:intergenic | 30.0% | |
| TCATCATTTAACCAATTGAG+CGG | - | chr5.4:16567624-16567643 | None:intergenic | 30.0% | |
| TCTAATAAAATGAAACGAGG+AGG | - | chr5.4:16566078-16566097 | None:intergenic | 30.0% | |
| TCTTCCTTTCTTGATACATT+GGG | + | chr5.4:16567895-16567914 | MS.gene83491:intron | 30.0% | |
| TGTGATGTATATATGACTGT+GGG | + | chr5.4:16568354-16568373 | MS.gene83491:intron | 30.0% | |
| TTCAGTTTCTGTATGGAATA+TGG | + | chr5.4:16568275-16568294 | MS.gene83491:intron | 30.0% | |
| TTGATGCCAAGAAATATCTT+GGG | - | chr5.4:16568794-16568813 | None:intergenic | 30.0% | |
| TTGTGATGTATATATGACTG+TGG | + | chr5.4:16568353-16568372 | MS.gene83491:intron | 30.0% | |
| TTGTGTTAGGGTATAAACTT+AGG | - | chr5.4:16565572-16565591 | None:intergenic | 30.0% | |
| ! | AAATAAGTCATTTAGGACTG+AGG | - | chr5.4:16566007-16566026 | None:intergenic | 30.0% |
| ! | AACTAGAAACAGTTTTACTG+AGG | - | chr5.4:16567584-16567603 | None:intergenic | 30.0% |
| ! | AGCTCTAATAAAATGAAACG+AGG | - | chr5.4:16566081-16566100 | None:intergenic | 30.0% |
| ! | ATAATTCTTTTAACCATGGC+TGG | + | chr5.4:16567737-16567756 | MS.gene83491:intron | 30.0% |
| ! | CTCCATGACATTCTTAATTT+TGG | + | chr5.4:16566625-16566644 | MS.gene83491:intron | 30.0% |
| ! | CTTAAAGTCTCAAGATCTTT+TGG | - | chr5.4:16568627-16568646 | None:intergenic | 30.0% |
| ! | GCCAATAATTCTTTTAACCA+TGG | + | chr5.4:16567733-16567752 | MS.gene83491:intron | 30.0% |
| ! | TATAAGTACTCTTTTACAGC+TGG | + | chr5.4:16565452-16565471 | MS.gene83491:intron | 30.0% |
| ! | TATCGGAAAATGTTTCTATG+CGG | + | chr5.4:16564807-16564826 | MS.gene83491:CDS | 30.0% |
| ! | TCAACCCAAATTCTAAGAAT+TGG | + | chr5.4:16565184-16565203 | MS.gene83491:intron | 30.0% |
| ! | TTAGGAGAACATGAAAGTAT+CGG | + | chr5.4:16564790-16564809 | MS.gene83491:intron | 30.0% |
| !! | CAGTTTTGTAATGTTGAGTT+AGG | + | chr5.4:16565011-16565030 | MS.gene83491:intron | 30.0% |
| !! | TTTTGAAAAATAGAGGATGG+GGG | + | chr5.4:16566024-16566043 | MS.gene83491:intron | 30.0% |
| !!! | ATGTGTTGATTTGGTTTTTC+CGG | - | chr5.4:16564471-16564490 | None:intergenic | 30.0% |
| !!! | CAGTAGAGTAGTTTTTTTTG+TGG | + | chr5.4:16565641-16565660 | MS.gene83491:intron | 30.0% |
| !!! | GAGTCAGTTTATTTTGTGTT+AGG | - | chr5.4:16565585-16565604 | None:intergenic | 30.0% |
| !!! | TAGAGTAGTTTTTTTTGTGG+TGG | + | chr5.4:16565644-16565663 | MS.gene83491:intron | 30.0% |
| !!! | TTTTTTCTCAACAGTTCTTC+AGG | - | chr5.4:16567257-16567276 | None:intergenic | 30.0% |
| AAGCACATATACTCTCGATT+AGG | + | chr5.4:16565045-16565064 | MS.gene83491:intron | 35.0% | |
| ACTTTAAGTGAAGCTGTTGA+TGG | + | chr5.4:16568639-16568658 | MS.gene83491:CDS | 35.0% | |
| AGAAAGGAAGAGCTTCATAT+AGG | - | chr5.4:16567886-16567905 | None:intergenic | 35.0% | |
| AGAAGAACAAATCACTCAAG+TGG | - | chr5.4:16567696-16567715 | None:intergenic | 35.0% | |
| ATAATTAGGGAGTTGTGTCT+GGG | + | chr5.4:16566670-16566689 | MS.gene83491:intron | 35.0% | |
| ATCAATGCAATTCACGGTAA+TGG | - | chr5.4:16567828-16567847 | None:intergenic | 35.0% | |
| ATCTTGGAGCTTAAAAAGAC+GGG | + | chr5.4:16566474-16566493 | MS.gene83491:CDS | 35.0% | |
| ATGGTTATGAAATGGCGAAA+AGG | + | chr5.4:16565924-16565943 | MS.gene83491:CDS | 35.0% | |
| CAAGTGTTTAAACTTAGAGC+AGG | + | chr5.4:16565267-16565286 | MS.gene83491:intron | 35.0% | |
| CCTGATATCAATGCAATTCA+CGG | - | chr5.4:16567834-16567853 | None:intergenic | 35.0% | |
| CTCTTCCTTTCTTGATACAT+TGG | + | chr5.4:16567894-16567913 | MS.gene83491:intron | 35.0% | |
| CTCTTTAAATCATACCAGAC+AGG | - | chr5.4:16565977-16565996 | None:intergenic | 35.0% | |
| CTGTCTGGTATGATTTAAAG+AGG | + | chr5.4:16565975-16565994 | MS.gene83491:CDS | 35.0% | |
| GAAATTTGTAAGTGCAGGTT+CGG | + | chr5.4:16568918-16568937 | MS.gene83491:intron | 35.0% | |
| GAATCGTATGTATATCAACG+AGG | + | chr5.4:16564626-16564645 | MS.gene83491:intron | 35.0% | |
| GATCTTGGAGCTTAAAAAGA+CGG | + | chr5.4:16566473-16566492 | MS.gene83491:CDS | 35.0% | |
| GGTGTATCACAAAATATCAG+AGG | - | chr5.4:16567330-16567349 | None:intergenic | 35.0% | |
| GGTTAAATGATGATCACAAG+TGG | + | chr5.4:16567631-16567650 | MS.gene83491:intron | 35.0% | |
| GTAATCATATGTGTAGGTGT+CGG | - | chr5.4:16565092-16565111 | None:intergenic | 35.0% | |
| GTGAATGTACTTCTTGTGTA+GGG | + | chr5.4:16567946-16567965 | MS.gene83491:intron | 35.0% | |
| GTGATGTATATATGACTGTG+GGG | + | chr5.4:16568355-16568374 | MS.gene83491:intron | 35.0% | |
| GTTGATGCCAAGAAATATCT+TGG | - | chr5.4:16568795-16568814 | None:intergenic | 35.0% | |
| TAACTACGCTGAGAAATTGA+TGG | + | chr5.4:16564703-16564722 | MS.gene83491:intron | 35.0% | |
| TACTCATTGATAAATCCTGG+GGG | + | chr5.4:16566335-16566354 | MS.gene83491:intron | 35.0% | |
| TACTTCTTGTGTAGGGAAAT+GGG | + | chr5.4:16567953-16567972 | MS.gene83491:intron | 35.0% | |
| TCAATGCAATTCACGGTAAT+GGG | - | chr5.4:16567827-16567846 | None:intergenic | 35.0% | |
| TCAATTTCTCAGCGTAGTTA+CGG | - | chr5.4:16564703-16564722 | None:intergenic | 35.0% | |
| TGACAATGATATCAAGCATG+CGG | + | chr5.4:16569045-16569064 | MS.gene83491:CDS | 35.0% | |
| TGATGCCAAGAAATATCTTG+GGG | - | chr5.4:16568793-16568812 | None:intergenic | 35.0% | |
| TGTGAATGTACTTCTTGTGT+AGG | + | chr5.4:16567945-16567964 | MS.gene83491:intron | 35.0% | |
| TTATTGTGGCAGAATTCTCA+TGG | + | chr5.4:16565905-16565924 | MS.gene83491:CDS | 35.0% | |
| TTCTCATATCGCATTTAGCT+GGG | - | chr5.4:16567785-16567804 | None:intergenic | 35.0% | |
| TTGCAGTTTGTAAAACAGCT+TGG | + | chr5.4:16568492-16568511 | MS.gene83491:CDS | 35.0% | |
| TTGCTTATATGATCTTCTCG+TGG | + | chr5.4:16567415-16567434 | MS.gene83491:intron | 35.0% | |
| TTGGTGAAATTTGTAAGTGC+AGG | + | chr5.4:16568913-16568932 | MS.gene83491:intron | 35.0% | |
| TTTCTCATATCGCATTTAGC+TGG | - | chr5.4:16567786-16567805 | None:intergenic | 35.0% | |
| TTTCTTGGCATCAACTTCTA+TGG | + | chr5.4:16568800-16568819 | MS.gene83491:CDS | 35.0% | |
| ! | AATATCTTGGGGCAATGTTT+TGG | - | chr5.4:16568782-16568801 | None:intergenic | 35.0% |
| ! | AGTGAGTATGTCTTGGTAAT+TGG | - | chr5.4:16564670-16564689 | None:intergenic | 35.0% |
| ! | ATATCTTGGGGCAATGTTTT+GGG | - | chr5.4:16568781-16568800 | None:intergenic | 35.0% |
| ! | ATCCATTTCAAAGGTGCATT+CGG | - | chr5.4:16568711-16568730 | None:intergenic | 35.0% |
| ! | CCATTACAATTTTCTCACCT+CGG | + | chr5.4:16568306-16568325 | MS.gene83491:intron | 35.0% |
| ! | CTTTCTTCTTTTACATGTGC+AGG | + | chr5.4:16568467-16568486 | MS.gene83491:intron | 35.0% |
| ! | GCACACTATATCAGTTGATA+TGG | + | chr5.4:16568443-16568462 | MS.gene83491:intron | 35.0% |
| ! | GTGGCTGTAATTCTAAAAGA+GGG | + | chr5.4:16567525-16567544 | MS.gene83491:intron | 35.0% |
| ! | TAAAACGGAGTTGAGACTTT+TGG | + | chr5.4:16565617-16565636 | MS.gene83491:intron | 35.0% |
| ! | TGGCTGTAATTCTAAAAGAG+GGG | + | chr5.4:16567526-16567545 | MS.gene83491:intron | 35.0% |
| ! | TTGCAGTTGGTCTATGTTAT+AGG | + | chr5.4:16568561-16568580 | MS.gene83491:CDS | 35.0% |
| !! | GTTGTGAAGATGTGTTGATT+TGG | - | chr5.4:16564480-16564499 | None:intergenic | 35.0% |
| !! | TAATGGGTTCTTTAAAGCAG+AGG | - | chr5.4:16567811-16567830 | None:intergenic | 35.0% |
| !!! | AGACTTTCCTTTGGTTTTTC+CGG | + | chr5.4:16568855-16568874 | MS.gene83491:intron | 35.0% |
| !!! | ATTTTTGAGTTTACGAGGTC+TGG | + | chr5.4:16568168-16568187 | MS.gene83491:intron | 35.0% |
| !!! | TTTTTGAGTTTACGAGGTCT+GGG | + | chr5.4:16568169-16568188 | MS.gene83491:intron | 35.0% |
| AAAATGAAACGAGGAGGGTT+AGG | - | chr5.4:16566072-16566091 | None:intergenic | 40.0% | |
| AAACTGCAAGCACATGACTT+TGG | + | chr5.4:16568600-16568619 | MS.gene83491:CDS | 40.0% | |
| ACTTGCACTCTGTCACTATA+AGG | - | chr5.4:16567304-16567323 | None:intergenic | 40.0% | |
| AGGAGTAACACTTGGTTAGT+GGG | + | chr5.4:16566703-16566722 | MS.gene83491:intron | 40.0% | |
| ATAAACCCCGGAAAAACCAA+AGG | - | chr5.4:16568865-16568884 | None:intergenic | 40.0% | |
| ATACTGCAATGAGTGTATCG+TGG | + | chr5.4:16567506-16567525 | MS.gene83491:intron | 40.0% | |
| ATCATCCAAGGTCAACCATT+GGG | - | chr5.4:16567090-16567109 | None:intergenic | 40.0% | |
| ATTCTACAGATCCTTCTTGG+TGG | + | chr5.4:16568738-16568757 | MS.gene83491:CDS | 40.0% | |
| CAGACCCAATGTATCAAGAA+AGG | - | chr5.4:16567902-16567921 | None:intergenic | 40.0% | |
| CATTGCCCCAAGATATTTCT+TGG | + | chr5.4:16568785-16568804 | MS.gene83491:CDS | 40.0% | |
| CCGAGGTGAGAAAATTGTAA+TGG | - | chr5.4:16568309-16568328 | None:intergenic | 40.0% | |
| CGTTATGAATATCCCGTACT+TGG | + | chr5.4:16564830-16564849 | MS.gene83491:CDS | 40.0% | |
| CTAACTAAATAACAACCCCC+AGG | - | chr5.4:16566353-16566372 | None:intergenic | 40.0% | |
| CTATCCTAATGTTAGGAGTG+AGG | - | chr5.4:16565750-16565769 | None:intergenic | 40.0% | |
| CTCTGTCACTATAAGGTCAA+TGG | - | chr5.4:16567297-16567316 | None:intergenic | 40.0% | |
| GAGGTCTTTCAGTTTCTGTA+TGG | + | chr5.4:16568268-16568287 | MS.gene83491:intron | 40.0% | |
| GATAATTAGGGAGTTGTGTC+TGG | + | chr5.4:16566669-16566688 | MS.gene83491:intron | 40.0% | |
| GCAACTCTGCTTGTAATTCA+CGG | + | chr5.4:16568118-16568137 | MS.gene83491:intron | 40.0% | |
| GGTCATGTCTGAACTTAGTT+TGG | + | chr5.4:16565288-16565307 | MS.gene83491:intron | 40.0% | |
| GTAAGTCGAAGACTTTCCTT+TGG | + | chr5.4:16568846-16568865 | MS.gene83491:intron | 40.0% | |
| GTACTTCTTGTGTAGGGAAA+TGG | + | chr5.4:16567952-16567971 | MS.gene83491:intron | 40.0% | |
| GTATCCTCACTCCTAACATT+AGG | + | chr5.4:16565743-16565762 | MS.gene83491:intron | 40.0% | |
| GTCAATTTCTTTGCGGTTAG+AGG | + | chr5.4:16569087-16569106 | MS.gene83491:CDS | 40.0% | |
| TAAAAAGACGGGAGAAGCTT+TGG | + | chr5.4:16566485-16566504 | MS.gene83491:CDS | 40.0% | |
| TAATTAGGGAGTTGTGTCTG+GGG | + | chr5.4:16566671-16566690 | MS.gene83491:intron | 40.0% | |
| TAGGAGTAACACTTGGTTAG+TGG | + | chr5.4:16566702-16566721 | MS.gene83491:intron | 40.0% | |
| TAGTCAACTAACCGCTCAAT+TGG | + | chr5.4:16567610-16567629 | MS.gene83491:intron | 40.0% | |
| TAGTGAACAGAAGTTGCAGT+TGG | + | chr5.4:16568548-16568567 | MS.gene83491:CDS | 40.0% | |
| TATCATCCAAGGTCAACCAT+TGG | - | chr5.4:16567091-16567110 | None:intergenic | 40.0% | |
| TATTAATACACCACCAGCCA+TGG | - | chr5.4:16567753-16567772 | None:intergenic | 40.0% | |
| TCACTATAAGGTCAATGGCT+TGG | - | chr5.4:16567292-16567311 | None:intergenic | 40.0% | |
| TCGCTAATAGGAGTAACACT+TGG | + | chr5.4:16566695-16566714 | MS.gene83491:intron | 40.0% | |
| TCTTCGACTTACCCTTTGAA+AGG | - | chr5.4:16568838-16568857 | None:intergenic | 40.0% | |
| TCTTGATACATTGGGTCTGT+TGG | + | chr5.4:16567903-16567922 | MS.gene83491:intron | 40.0% | |
| TGATCTGGACACTTTCACTT+AGG | - | chr5.4:16567025-16567044 | None:intergenic | 40.0% | |
| TGCTTACAGTGAGTATGTCT+TGG | - | chr5.4:16564677-16564696 | None:intergenic | 40.0% | |
| TGGACACTTTCACTTAGGAA+GGG | - | chr5.4:16567020-16567039 | None:intergenic | 40.0% | |
| TGTAGGGAAATGGGATATGA+TGG | + | chr5.4:16567962-16567981 | MS.gene83491:intron | 40.0% | |
| TTACACATTTGTCACCTGTC+TGG | + | chr5.4:16565960-16565979 | MS.gene83491:CDS | 40.0% | |
| ! | AGGGAGTATGTATCCAAGTA+CGG | - | chr5.4:16564846-16564865 | None:intergenic | 40.0% |
| ! | ATTCTTTTAACCATGGCTGG+TGG | + | chr5.4:16567740-16567759 | MS.gene83491:intron | 40.0% |
| ! | CCGTGAATTGCATTGATATC+AGG | + | chr5.4:16567831-16567850 | MS.gene83491:intron | 40.0% |
| ! | CGAGAGTATATGTGCTTCAT+AGG | - | chr5.4:16565042-16565061 | None:intergenic | 40.0% |
| ! | CGTGGCTGTAATTCTAAAAG+AGG | + | chr5.4:16567524-16567543 | MS.gene83491:intron | 40.0% |
| ! | CTATTGCGTCTAAAGCAGAT+TGG | - | chr5.4:16564935-16564954 | None:intergenic | 40.0% |
| ! | CTTCGACTTACCCTTTGAAA+GGG | - | chr5.4:16568837-16568856 | None:intergenic | 40.0% |
| ! | GAAGAAGGCAACGATTTTGA+TGG | - | chr5.4:16564539-16564558 | None:intergenic | 40.0% |
| ! | GACTTAGATGCCTACCTTTT+AGG | + | chr5.4:16566202-16566221 | MS.gene83491:intron | 40.0% |
| ! | GAGAGATTACCTAGCACTTT+TGG | + | chr5.4:16568958-16568977 | MS.gene83491:CDS | 40.0% |
| ! | GATGGTTTAGAGTGCAATTG+AGG | + | chr5.4:16564721-16564740 | MS.gene83491:intron | 40.0% |
| ! | TTTTCTAATCCTCACAACCC+TGG | + | chr5.4:16568684-16568703 | MS.gene83491:CDS | 40.0% |
| ! | TTTTTGTGGTGGTAACCAGT+TGG | + | chr5.4:16565655-16565674 | MS.gene83491:intron | 40.0% |
| !! | AATTCTGGGGTACTCAGATT+TGG | + | chr5.4:16565509-16565528 | MS.gene83491:intron | 40.0% |
| !! | ATTGGCGTCGATTGTAAACA+AGG | - | chr5.4:16564652-16564671 | None:intergenic | 40.0% |
| !! | GATGCCTACCTTTTAGGAAT+AGG | + | chr5.4:16566208-16566227 | MS.gene83491:intron | 40.0% |
| !! | GTGATACACCTTTAAGGCAA+TGG | + | chr5.4:16567340-16567359 | MS.gene83491:intron | 40.0% |
| !!! | ACTTTCCTTTGGTTTTTCCG+GGG | + | chr5.4:16568857-16568876 | MS.gene83491:intron | 40.0% |
| !!! | GACTTTCCTTTGGTTTTTCC+GGG | + | chr5.4:16568856-16568875 | MS.gene83491:intron | 40.0% |
| !!! | TCCAGATCAGTCGGTTTTTT+GGG | + | chr5.4:16567036-16567055 | MS.gene83491:intron | 40.0% |
| AGATGCCACATTCCATGAAC+GGG | - | chr5.4:16569116-16569135 | None:intergenic | 45.0% | |
| ATACGATTCGTGCTTTGCGA+AGG | - | chr5.4:16564615-16564634 | None:intergenic | 45.0% | |
| ATACTCTCGATTAGGCGTGT+CGG | + | chr5.4:16565053-16565072 | MS.gene83491:intron | 45.0% | |
| ATTTGTAAGTGCAGGTTCGG+TGG | + | chr5.4:16568921-16568940 | MS.gene83491:intron | 45.0% | |
| CTGGACACTTTCACTTAGGA+AGG | - | chr5.4:16567021-16567040 | None:intergenic | 45.0% | |
| GAAGGAGAAGATGTCTGAAC+CGG | - | chr5.4:16564597-16564616 | None:intergenic | 45.0% | |
| GACATAATGCTGACAGAGGA+TGG | + | chr5.4:16566451-16566470 | MS.gene83491:CDS | 45.0% | |
| GAGATGCCACATTCCATGAA+CGG | - | chr5.4:16569117-16569136 | None:intergenic | 45.0% | |
| GATCTTGCCTAGAGTTGTTC+TGG | + | chr5.4:16567223-16567242 | MS.gene83491:intron | 45.0% | |
| GATGCTTCCAGAACAACTCT+AGG | - | chr5.4:16567233-16567252 | None:intergenic | 45.0% | |
| GCTTGCAGTTTCTCAGAAGA+TGG | - | chr5.4:16568591-16568610 | None:intergenic | 45.0% | |
| GGAATGTGGCATCTCGATAT+GGG | + | chr5.4:16569122-16569141 | MS.gene83491:CDS | 45.0% | |
| GGACACTTTCACTTAGGAAG+GGG | - | chr5.4:16567019-16567038 | None:intergenic | 45.0% | |
| GGCATCTCGATATGGGAAAT+TGG | + | chr5.4:16569129-16569148 | MS.gene83491:CDS | 45.0% | |
| GTACTTGGATACATACTCCC+TGG | + | chr5.4:16564845-16564864 | MS.gene83491:CDS | 45.0% | |
| GTTGAATGAGTTTGTGCCAG+TGG | + | chr5.4:16565479-16565498 | MS.gene83491:intron | 45.0% | |
| GTTGTCCTGAATCTTGGTCA+AGG | + | chr5.4:16567986-16568005 | MS.gene83491:intron | 45.0% | |
| TATGATCTTCTCGTGGTGAC+TGG | + | chr5.4:16567422-16567441 | MS.gene83491:intron | 45.0% | |
| TCCTGAATCTTGGTCAAGGT+GGG | + | chr5.4:16567990-16568009 | MS.gene83491:intron | 45.0% | |
| TGAGCTGTAGAGAAGGAATG+CGG | + | chr5.4:16566947-16566966 | MS.gene83491:intron | 45.0% | |
| TGATCCAAGCATGCGGAATT+TGG | + | chr5.4:16568032-16568051 | MS.gene83491:CDS | 45.0% | |
| TGCAGTCACATGATAAACCC+CGG | - | chr5.4:16568877-16568896 | None:intergenic | 45.0% | |
| TGCAGTGGGATAAGAACAGT+GGG | + | chr5.4:16568999-16569018 | MS.gene83491:CDS | 45.0% | |
| TGCAGTTTCTCAGAAGATGG+TGG | - | chr5.4:16568588-16568607 | None:intergenic | 45.0% | |
| TGCCTTCTTCATCCTATCGT+CGG | + | chr5.4:16564549-16564568 | MS.gene83491:CDS | 45.0% | |
| TGGAATGTGGCATCTCGATA+TGG | + | chr5.4:16569121-16569140 | MS.gene83491:CDS | 45.0% | |
| TTCTTATCCCACTGCAGAGT+AGG | - | chr5.4:16568995-16569014 | None:intergenic | 45.0% | |
| TTGTCTTACAGGTAAAGCCG+AGG | - | chr5.4:16568326-16568345 | None:intergenic | 45.0% | |
| ! | AACTAAGCTAGTCTGTTGGC+TGG | - | chr5.4:16566421-16566440 | None:intergenic | 45.0% |
| ! | CCAGAACTAAGCTAGTCTGT+TGG | - | chr5.4:16566425-16566444 | None:intergenic | 45.0% |
| ! | GGGAGTATGTATCCAAGTAC+GGG | - | chr5.4:16564845-16564864 | None:intergenic | 45.0% |
| ! | GTCCGAATGCACCTTTGAAA+TGG | + | chr5.4:16568706-16568725 | MS.gene83491:CDS | 45.0% |
| !! | ACAGACTAGCTTAGTTCTGG+AGG | + | chr5.4:16566425-16566444 | MS.gene83491:CDS | 45.0% |
| !! | AGACTAGCTTAGTTCTGGAG+GGG | + | chr5.4:16566427-16566446 | MS.gene83491:CDS | 45.0% |
| !! | CAGACTAGCTTAGTTCTGGA+GGG | + | chr5.4:16566426-16566445 | MS.gene83491:CDS | 45.0% |
| !! | CATTGGGTCTGTTGGTGATA+TGG | + | chr5.4:16567911-16567930 | MS.gene83491:intron | 45.0% |
| !! | CCAACAGACTAGCTTAGTTC+TGG | + | chr5.4:16566422-16566441 | MS.gene83491:CDS | 45.0% |
| !! | GATGGTGTTGTCCTGAATCT+TGG | + | chr5.4:16567980-16567999 | MS.gene83491:intron | 45.0% |
| !! | GGCAATGTTTTGGGCACTAT+TGG | - | chr5.4:16568772-16568791 | None:intergenic | 45.0% |
| !! | GTGAAAGTGTCCAGATCAGT+CGG | + | chr5.4:16567027-16567046 | MS.gene83491:intron | 45.0% |
| !! | TGTGCTTCTCCAAAAGTGCT+AGG | - | chr5.4:16568970-16568989 | None:intergenic | 45.0% |
| !! | TTCGGTGGTGGACCTATTAT+TGG | + | chr5.4:16568936-16568955 | MS.gene83491:CDS | 45.0% |
| !!! | GATTTGGTTTTTCCGGTGAC+CGG | - | chr5.4:16564464-16564483 | None:intergenic | 45.0% |
| !!! | GTCCAGATCAGTCGGTTTTT+TGG | + | chr5.4:16567035-16567054 | MS.gene83491:intron | 45.0% |
| !! | ATGAAAAAAAAAAAAAATTA+TGG | + | chr5.4:16566779-16566798 | MS.gene83491:intron | 5.0% |
| AGCTGTAGAGAAGGAATGCG+GGG | + | chr5.4:16566949-16566968 | MS.gene83491:intron | 50.0% | |
| CACCGACGATAGGATGAAGA+AGG | - | chr5.4:16564554-16564573 | None:intergenic | 50.0% | |
| CAGTGGCAACTGCAATTCTG+GGG | + | chr5.4:16565496-16565515 | MS.gene83491:intron | 50.0% | |
| CCAGTGGCAACTGCAATTCT+GGG | + | chr5.4:16565495-16565514 | MS.gene83491:intron | 50.0% | |
| CGAAGAAGCGAGATCAACAC+CGG | + | chr5.4:16564425-16564444 | MS.gene83491:CDS | 50.0% | |
| CTCACCAAATTCCGCATGCT+TGG | - | chr5.4:16568039-16568058 | None:intergenic | 50.0% | |
| CTGCAGTGGGATAAGAACAG+TGG | + | chr5.4:16568998-16569017 | MS.gene83491:CDS | 50.0% | |
| GAGCTGTAGAGAAGGAATGC+GGG | + | chr5.4:16566948-16566967 | MS.gene83491:intron | 50.0% | |
| GCAGTGGGATAAGAACAGTG+GGG | + | chr5.4:16569000-16569019 | MS.gene83491:CDS | 50.0% | |
| GCCCAAAAAACCGACTGATC+TGG | - | chr5.4:16567040-16567059 | None:intergenic | 50.0% | |
| GGGAGACATAATGCTGACAG+AGG | + | chr5.4:16566447-16566466 | MS.gene83491:CDS | 50.0% | |
| GTCCTGAATCTTGGTCAAGG+TGG | + | chr5.4:16567989-16568008 | MS.gene83491:intron | 50.0% | |
| TCCAAGGTCAACCATTGGGA+AGG | - | chr5.4:16567086-16567105 | None:intergenic | 50.0% | |
| TCCTTCCCAATGGTTGACCT+TGG | + | chr5.4:16567082-16567101 | MS.gene83491:intron | 50.0% | |
| TCTTGCGTGATCCAAGCATG+CGG | + | chr5.4:16568025-16568044 | MS.gene83491:CDS | 50.0% | |
| TGAATCTTGGTCAAGGTGGG+CGG | + | chr5.4:16567993-16568012 | MS.gene83491:intron | 50.0% | |
| TGCTGACAGAGGATGGATCT+TGG | + | chr5.4:16566458-16566477 | MS.gene83491:CDS | 50.0% | |
| TTCCTTCTCTACAGCTCACG+AGG | - | chr5.4:16566945-16566964 | None:intergenic | 50.0% | |
| ! | TCAAAGGTGCATTCGGACCA+GGG | - | chr5.4:16568704-16568723 | None:intergenic | 50.0% |
| ! | TTCAAAGGTGCATTCGGACC+AGG | - | chr5.4:16568705-16568724 | None:intergenic | 50.0% |
| !! | ACGATTTTGATGGCACCGGA+AGG | - | chr5.4:16564529-16564548 | None:intergenic | 50.0% |
| !! | GGCAACGATTTTGATGGCAC+CGG | - | chr5.4:16564533-16564552 | None:intergenic | 50.0% |
| !! | GTTTTGGGCACTATTGGCAG+AGG | - | chr5.4:16568766-16568785 | None:intergenic | 50.0% |
| !!! | CAGTCGGTTTTTTGGGCCTT+GGG | + | chr5.4:16567043-16567062 | MS.gene83491:intron | 50.0% |
| !!! | TCAGTCGGTTTTTTGGGCCT+TGG | + | chr5.4:16567042-16567061 | MS.gene83491:intron | 50.0% |
| AGCACAGACCTACTCTGCAG+TGG | + | chr5.4:16568984-16569003 | MS.gene83491:CDS | 55.0% | |
| CCCAGAATTGCAGTTGCCAC+TGG | - | chr5.4:16565498-16565517 | None:intergenic | 55.0% | |
| GCACAGACCTACTCTGCAGT+GGG | + | chr5.4:16568985-16569004 | MS.gene83491:CDS | 55.0% | |
| GCCAGTGGCAACTGCAATTC+TGG | + | chr5.4:16565494-16565513 | MS.gene83491:intron | 55.0% | |
| GCCCACCTTGACCAAGATTC+AGG | - | chr5.4:16567994-16568013 | None:intergenic | 55.0% | |
| GCTGTAGAGAAGGAATGCGG+GGG | + | chr5.4:16566950-16566969 | MS.gene83491:intron | 55.0% | |
| GGAAGCCCGTTCATGGAATG+TGG | + | chr5.4:16569108-16569127 | MS.gene83491:CDS | 55.0% | |
| GGTTAGAGGAAGCCCGTTCA+TGG | + | chr5.4:16569101-16569120 | MS.gene83491:CDS | 55.0% | |
| TCTACAGCTCACGAGGCAGT+AGG | - | chr5.4:16566938-16566957 | None:intergenic | 55.0% | |
| TGAGTTTACGAGGTCTGGGC+AGG | + | chr5.4:16568173-16568192 | MS.gene83491:intron | 55.0% | |
| TGCCTCGTGAGCTGTAGAGA+AGG | + | chr5.4:16566940-16566959 | MS.gene83491:intron | 55.0% | |
| TTTCCGGTGACCGGAACTCT+GGG | - | chr5.4:16564455-16564474 | None:intergenic | 55.0% | |
| ! | TGTGTCTGGGGCTCGCTAAT+AGG | + | chr5.4:16566683-16566702 | MS.gene83491:intron | 55.0% |
| ! | TTTGATGGCACCGGAAGGTG+AGG | - | chr5.4:16564524-16564543 | None:intergenic | 55.0% |
| ! | TTTTCCGGTGACCGGAACTC+TGG | - | chr5.4:16564456-16564475 | None:intergenic | 55.0% |
| !! | TGTAAGTGCAGGTTCGGTGG+TGG | + | chr5.4:16568924-16568943 | MS.gene83491:intron | 55.0% |
| ACTCACTCCGCCTCACCTTC+CGG | + | chr5.4:16564511-16564530 | MS.gene83491:CDS | 60.0% | |
| CACCGGTCATCCCAGAGTTC+CGG | + | chr5.4:16564442-16564461 | MS.gene83491:CDS | 60.0% | |
| CATCCCAGAGTTCCGGTCAC+CGG | + | chr5.4:16564449-16564468 | MS.gene83491:CDS | 60.0% | |
| GAACCGGTAAGCGACGACGA+CGG | - | chr5.4:16564581-16564600 | None:intergenic | 60.0% | |
| GCATTCGGACCAGGGTTGTG+AGG | - | chr5.4:16568696-16568715 | None:intergenic | 60.0% | |
| GTGAGGCGGAGTGAGTGAGT+TGG | - | chr5.4:16564507-16564526 | None:intergenic | 60.0% | |
| TGGTCAAGGTGGGCGGCTTA+TGG | + | chr5.4:16568000-16568019 | MS.gene83491:intron | 60.0% | |
| !! | GACCGGAACTCTGGGATGAC+CGG | - | chr5.4:16564447-16564466 | None:intergenic | 60.0% |
| !! | GCGGAGTGAGTGAGTTGGTC+TGG | - | chr5.4:16564502-16564521 | None:intergenic | 60.0% |
| !! | TGGCAGAGGCACCACCAAGA+AGG | - | chr5.4:16568752-16568771 | None:intergenic | 60.0% |
| CGACGGCGATCACCGACGAT+AGG | - | chr5.4:16564564-16564583 | None:intergenic | 65.0% | |
| TCGCCGTCGTCGTCGCTTAC+CGG | + | chr5.4:16564575-16564594 | MS.gene83491:CDS | 65.0% | |
| ! | GATGGCACCGGAAGGTGAGG+CGG | - | chr5.4:16564521-16564540 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 16564421 | 16569156 | 16564421 | ID=MS.gene83491 |
| chr5.4 | mRNA | 16564421 | 16569156 | 16564421 | ID=MS.gene83491.t1;Parent=MS.gene83491 |
| chr5.4 | exon | 16564421 | 16564630 | 16564421 | ID=MS.gene83491.t1.exon1;Parent=MS.gene83491.t1 |
| chr5.4 | CDS | 16564421 | 16564630 | 16564421 | ID=cds.MS.gene83491.t1;Parent=MS.gene83491.t1 |
| chr5.4 | exon | 16564794 | 16564882 | 16564794 | ID=MS.gene83491.t1.exon2;Parent=MS.gene83491.t1 |
| chr5.4 | CDS | 16564794 | 16564882 | 16564794 | ID=cds.MS.gene83491.t1;Parent=MS.gene83491.t1 |
| chr5.4 | exon | 16565868 | 16565996 | 16565868 | ID=MS.gene83491.t1.exon3;Parent=MS.gene83491.t1 |
| chr5.4 | CDS | 16565868 | 16565996 | 16565868 | ID=cds.MS.gene83491.t1;Parent=MS.gene83491.t1 |
| chr5.4 | exon | 16566422 | 16566506 | 16566422 | ID=MS.gene83491.t1.exon4;Parent=MS.gene83491.t1 |
| chr5.4 | CDS | 16566422 | 16566506 | 16566422 | ID=cds.MS.gene83491.t1;Parent=MS.gene83491.t1 |
| chr5.4 | exon | 16567224 | 16567321 | 16567224 | ID=MS.gene83491.t1.exon5;Parent=MS.gene83491.t1 |
| chr5.4 | CDS | 16567224 | 16567321 | 16567224 | ID=cds.MS.gene83491.t1;Parent=MS.gene83491.t1 |
| chr5.4 | exon | 16568008 | 16568053 | 16568008 | ID=MS.gene83491.t1.exon6;Parent=MS.gene83491.t1 |
| chr5.4 | CDS | 16568008 | 16568053 | 16568008 | ID=cds.MS.gene83491.t1;Parent=MS.gene83491.t1 |
| chr5.4 | exon | 16568489 | 16568845 | 16568489 | ID=MS.gene83491.t1.exon7;Parent=MS.gene83491.t1 |
| chr5.4 | CDS | 16568489 | 16568845 | 16568489 | ID=cds.MS.gene83491.t1;Parent=MS.gene83491.t1 |
| chr5.4 | exon | 16568935 | 16569156 | 16568935 | ID=MS.gene83491.t1.exon8;Parent=MS.gene83491.t1 |
| chr5.4 | CDS | 16568935 | 16569156 | 16568935 | ID=cds.MS.gene83491.t1;Parent=MS.gene83491.t1 |
| Gene Sequence |
| Protein sequence |
