Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83962.t1 | XP_013452366.1 | 96.3 | 297 | 11 | 0 | 1 | 297 | 1 | 297 | 3.40E-162 | 580.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83962.t1 | Q8GXT7 | 46.4 | 304 | 138 | 6 | 3 | 297 | 4 | 291 | 3.0e-66 | 253.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83962.t1 | A0A072U9B5 | 96.3 | 297 | 11 | 0 | 1 | 297 | 1 | 297 | 2.5e-162 | 580.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene83962 | MS.gene56734 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83962.t1 | MTR_6g053720 | 96.296 | 297 | 11 | 0 | 1 | 297 | 1 | 297 | 0.0 | 593 |
MS.gene83962.t1 | MTR_6g009440 | 43.060 | 281 | 138 | 8 | 37 | 297 | 33 | 311 | 1.74e-72 | 226 |
MS.gene83962.t1 | MTR_4g118560 | 44.643 | 280 | 117 | 7 | 46 | 297 | 29 | 298 | 4.25e-71 | 222 |
MS.gene83962.t1 | MTR_2g020800 | 42.491 | 273 | 129 | 6 | 49 | 297 | 35 | 303 | 5.75e-68 | 214 |
MS.gene83962.t1 | MTR_2g020800 | 42.435 | 271 | 130 | 6 | 49 | 297 | 35 | 301 | 2.09e-67 | 212 |
MS.gene83962.t1 | MTR_3g114670 | 35.521 | 259 | 145 | 8 | 3 | 239 | 16 | 274 | 8.75e-38 | 135 |
MS.gene83962.t1 | MTR_8g074890 | 37.054 | 224 | 117 | 8 | 41 | 240 | 49 | 272 | 1.75e-37 | 134 |
MS.gene83962.t1 | MTR_8g074880 | 35.841 | 226 | 119 | 7 | 41 | 240 | 96 | 321 | 3.84e-37 | 135 |
MS.gene83962.t1 | MTR_8g074810 | 37.168 | 226 | 121 | 8 | 34 | 238 | 46 | 271 | 3.66e-35 | 128 |
MS.gene83962.t1 | MTR_5g022960 | 31.034 | 261 | 148 | 9 | 4 | 238 | 28 | 282 | 8.38e-34 | 125 |
MS.gene83962.t1 | MTR_8g074830 | 33.929 | 224 | 122 | 8 | 41 | 238 | 51 | 274 | 1.47e-32 | 121 |
MS.gene83962.t1 | MTR_1g116810 | 31.111 | 270 | 149 | 9 | 4 | 238 | 8 | 275 | 7.99e-31 | 117 |
MS.gene83962.t1 | MTR_3g114590 | 34.673 | 199 | 116 | 4 | 57 | 241 | 67 | 265 | 3.46e-29 | 117 |
MS.gene83962.t1 | MTR_3g114590 | 29.730 | 185 | 97 | 5 | 71 | 239 | 293 | 460 | 2.50e-14 | 73.6 |
MS.gene83962.t1 | MTR_8g074870 | 32.751 | 229 | 117 | 9 | 31 | 238 | 6 | 218 | 7.36e-27 | 105 |
MS.gene83962.t1 | MTR_3g114610 | 32.323 | 198 | 119 | 4 | 57 | 239 | 99 | 296 | 1.78e-25 | 103 |
MS.gene83962.t1 | MTR_5g016090 | 25.616 | 203 | 128 | 5 | 57 | 238 | 86 | 286 | 2.05e-18 | 84.0 |
MS.gene83962.t1 | MTR_4g095370 | 23.762 | 202 | 131 | 5 | 57 | 237 | 88 | 287 | 2.39e-16 | 78.2 |
MS.gene83962.t1 | MTR_5g022960 | 32.520 | 123 | 69 | 3 | 57 | 165 | 81 | 203 | 1.08e-14 | 71.6 |
MS.gene83962.t1 | MTR_3g051200 | 32.836 | 134 | 70 | 6 | 58 | 177 | 19 | 146 | 4.04e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83962.t1 | AT4G25600 | 46.512 | 301 | 136 | 6 | 6 | 297 | 7 | 291 | 3.41e-86 | 260 |
MS.gene83962.t1 | AT3G28490 | 44.610 | 269 | 122 | 6 | 49 | 297 | 27 | 288 | 1.29e-75 | 233 |
MS.gene83962.t1 | AT3G28480 | 39.809 | 314 | 165 | 7 | 3 | 297 | 6 | 314 | 1.38e-74 | 231 |
MS.gene83962.t1 | AT4G25600 | 47.561 | 246 | 108 | 4 | 57 | 297 | 1 | 230 | 2.51e-74 | 228 |
MS.gene83962.t1 | AT4G25600 | 48.548 | 241 | 103 | 4 | 62 | 297 | 15 | 239 | 3.22e-74 | 228 |
MS.gene83962.t1 | AT4G25600 | 48.548 | 241 | 103 | 4 | 62 | 297 | 3 | 227 | 3.68e-74 | 227 |
MS.gene83962.t1 | AT3G28480 | 38.820 | 322 | 165 | 7 | 3 | 297 | 6 | 322 | 3.61e-73 | 228 |
MS.gene83962.t1 | AT3G06300 | 41.948 | 267 | 129 | 6 | 53 | 297 | 37 | 299 | 2.33e-65 | 207 |
MS.gene83962.t1 | AT5G18900 | 38.376 | 271 | 141 | 5 | 49 | 297 | 32 | 298 | 8.78e-63 | 200 |
MS.gene83962.t1 | AT4G35810 | 36.098 | 205 | 111 | 4 | 57 | 241 | 83 | 287 | 3.55e-36 | 131 |
MS.gene83962.t1 | AT4G35810 | 36.098 | 205 | 111 | 4 | 57 | 241 | 83 | 287 | 3.55e-36 | 131 |
MS.gene83962.t1 | AT1G20270 | 34.314 | 204 | 114 | 5 | 57 | 240 | 79 | 282 | 2.64e-34 | 126 |
MS.gene83962.t1 | AT2G17720 | 35.122 | 205 | 113 | 5 | 57 | 241 | 83 | 287 | 3.35e-34 | 126 |
MS.gene83962.t1 | AT5G66060 | 29.134 | 254 | 160 | 4 | 5 | 238 | 29 | 282 | 2.14e-32 | 121 |
MS.gene83962.t1 | AT2G43080 | 28.159 | 277 | 162 | 6 | 2 | 244 | 10 | 283 | 8.27e-29 | 112 |
MS.gene83962.t1 | AT2G23096 | 26.562 | 256 | 155 | 8 | 3 | 236 | 22 | 266 | 2.98e-20 | 88.6 |
MS.gene83962.t1 | AT4G35820 | 33.684 | 190 | 86 | 7 | 57 | 223 | 91 | 263 | 2.32e-19 | 86.3 |
MS.gene83962.t1 | AT5G66060 | 27.513 | 189 | 121 | 3 | 5 | 179 | 29 | 215 | 3.20e-18 | 82.4 |
MS.gene83962.t1 | AT4G33910 | 23.485 | 264 | 162 | 8 | 7 | 238 | 26 | 281 | 8.45e-16 | 76.3 |
MS.gene83962.t1 | AT1G20270 | 34.146 | 123 | 67 | 3 | 57 | 165 | 79 | 201 | 1.85e-15 | 73.9 |
MS.gene83962.t1 | AT1G20270 | 34.146 | 123 | 67 | 3 | 57 | 165 | 79 | 201 | 1.85e-15 | 73.9 |
Find 70 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGACCACATATCGCCTTTA+AGG | 0.151018 | 6.1:-31296359 | None:intergenic |
CCTTTACAGGTCATGCATTA+TGG | 0.184280 | 6.1:+31295682 | MS.gene83962:CDS |
TTTCACAAACAAAACCAAAT+TGG | 0.191233 | 6.1:+31295735 | MS.gene83962:CDS |
GCTCGATGCCCTGTCCTTAA+AGG | 0.210672 | 6.1:+31296345 | MS.gene83962:CDS |
TCTTGTCAGGAGATGTATTT+AGG | 0.219035 | 6.1:-31296311 | None:intergenic |
ACCTTGGTTGCCAAGAGATT+TGG | 0.242434 | 6.1:-31291681 | None:intergenic |
GTGTGACTACCTTATTTATT+TGG | 0.242556 | 6.1:+31293521 | MS.gene83962:CDS |
AGAGAACAGCAAGCCTTTAC+AGG | 0.299865 | 6.1:+31295669 | MS.gene83962:intron |
CTTTACAGGTCATGCATTAT+GGG | 0.305434 | 6.1:+31295683 | MS.gene83962:CDS |
GCCGTACTCACCACTGATTC+AGG | 0.315848 | 6.1:-31295832 | None:intergenic |
AGAACTGCATTCCCTTTAAC+TGG | 0.334718 | 6.1:-31296273 | None:intergenic |
AGAGGAAACTTCATTGGATA+TGG | 0.342638 | 6.1:+31294097 | MS.gene83962:CDS |
TTCACAAACAAAACCAAATT+GGG | 0.356049 | 6.1:+31295736 | MS.gene83962:CDS |
AGGTCCGGTTGATCCCAATT+TGG | 0.361801 | 6.1:-31295749 | None:intergenic |
AAAGAAAGAGGAAACTTCAT+TGG | 0.368859 | 6.1:+31294091 | MS.gene83962:CDS |
GGGATCAACCGGACCTTTGA+TGG | 0.371144 | 6.1:+31295756 | MS.gene83962:CDS |
TGCAACATACCAAATAAATA+AGG | 0.373711 | 6.1:-31293530 | None:intergenic |
TTAGCAGCAGGAAAGAATTA+AGG | 0.376685 | 6.1:+31291581 | MS.gene83962:intron |
GAGGTTCTCCAACCAGTTAA+AGG | 0.393818 | 6.1:+31296261 | MS.gene83962:CDS |
TTGAAGAAAGACTTTCGGTT+TGG | 0.401961 | 6.1:+31295539 | MS.gene83962:CDS |
AAAACCAAATTGGGATCAAC+CGG | 0.420089 | 6.1:+31295745 | MS.gene83962:CDS |
GTTGGATCTCCTGATTACTA+TGG | 0.429222 | 6.1:+31296522 | MS.gene83962:CDS |
CGACAAGTACCATAGTAATC+AGG | 0.442588 | 6.1:-31296531 | None:intergenic |
TAGAAGCGAGAGGGTGAAGA+AGG | 0.445042 | 6.1:-31291457 | None:intergenic |
GAGGATTGAAGAAAGACTTT+CGG | 0.449118 | 6.1:+31295534 | MS.gene83962:CDS |
CACGTGTTGTCCAAATCTCT+TGG | 0.461511 | 6.1:+31291671 | MS.gene83962:CDS |
TCTCCCGTTGCTGCCCAAGC+TGG | 0.465114 | 6.1:-31296474 | None:intergenic |
CTGCATTCCCTTTAACTGGT+TGG | 0.472708 | 6.1:-31296269 | None:intergenic |
AAGAAGGTGTTAGAAGCGAG+AGG | 0.473143 | 6.1:-31291467 | None:intergenic |
AGATGATAGTTGTCCAGCTT+GGG | 0.474954 | 6.1:+31296461 | MS.gene83962:CDS |
CACTGTTGCCATCAAAGGTC+CGG | 0.475147 | 6.1:-31295764 | None:intergenic |
TGTCCAGCTTGGGCAGCAAC+GGG | 0.476542 | 6.1:+31296471 | MS.gene83962:CDS |
GCGTGTAAGCTACTCTTGTC+AGG | 0.476850 | 6.1:-31296324 | None:intergenic |
AGGTTCTCCAACCAGTTAAA+GGG | 0.477047 | 6.1:+31296262 | MS.gene83962:CDS |
CCATAATGCATGACCTGTAA+AGG | 0.487176 | 6.1:-31295682 | None:intergenic |
AAGATGATAGTTGTCCAGCT+TGG | 0.488359 | 6.1:+31296460 | MS.gene83962:CDS |
CGGAACCCTGTCTACATGGT+TGG | 0.491604 | 6.1:+31296504 | MS.gene83962:CDS |
ATTTGACCAGCTGCTACTCT+TGG | 0.492285 | 6.1:-31296223 | None:intergenic |
GGAGATCCAACCATGTAGAC+AGG | 0.498626 | 6.1:-31296510 | None:intergenic |
AGAGGGTGAAGAAGGTGATG+AGG | 0.510106 | 6.1:-31291449 | None:intergenic |
TAACACCTTCTTTCTCCGAC+AGG | 0.514033 | 6.1:+31291478 | MS.gene83962:CDS |
TTGTCCAGCTTGGGCAGCAA+CGG | 0.515020 | 6.1:+31296470 | MS.gene83962:CDS |
CACATATCGCCTTTAAGGAC+AGG | 0.515314 | 6.1:-31296354 | None:intergenic |
AATTACCTGTCGGAGAAAGA+AGG | 0.515809 | 6.1:-31291483 | None:intergenic |
CTGATTACTATGGTACTTGT+CGG | 0.527249 | 6.1:+31296532 | MS.gene83962:CDS |
TCAACGGAACCCTGTCTACA+TGG | 0.530423 | 6.1:+31296500 | MS.gene83962:CDS |
TGGTGGCTATTCAAAGAAAG+AGG | 0.553698 | 6.1:+31294079 | MS.gene83962:CDS |
AGAATCACTGTTGCCATCAA+AGG | 0.553753 | 6.1:-31295769 | None:intergenic |
GAAGAAGGTGATGAGGAGAA+AGG | 0.556142 | 6.1:-31291442 | None:intergenic |
AGAAGGTGTTAGAAGCGAGA+GGG | 0.558813 | 6.1:-31291466 | None:intergenic |
CACCACTGATTCAGGAAAGA+GGG | 0.567187 | 6.1:-31295824 | None:intergenic |
ATCTCTCGAATGCTACTCAA+GGG | 0.570249 | 6.1:+31295794 | MS.gene83962:CDS |
TCACCACTGATTCAGGAAAG+AGG | 0.571225 | 6.1:-31295825 | None:intergenic |
CATCTCTCGAATGCTACTCA+AGG | 0.573935 | 6.1:+31295793 | MS.gene83962:CDS |
AACCCTCTTTCCTGAATCAG+TGG | 0.574378 | 6.1:+31295822 | MS.gene83962:CDS |
CACAGACCAAGAGTAGCAGC+TGG | 0.591686 | 6.1:+31296217 | MS.gene83962:intron |
CTGTCCTTAAAGGCGATATG+TGG | 0.609635 | 6.1:+31296355 | MS.gene83962:CDS |
TCCAAATCTCTTGGCAACCA+AGG | 0.611001 | 6.1:+31291680 | MS.gene83962:CDS |
TATACAAGATCGATCAGTGG+AGG | 0.618199 | 6.1:+31296396 | MS.gene83962:CDS |
GAGATTTGGACAACACGTGA+AGG | 0.623698 | 6.1:-31291667 | None:intergenic |
AGGGAAAGTCTCAACTACGC+TGG | 0.624281 | 6.1:+31296416 | MS.gene83962:CDS |
TTTAGGATGATATTGTCAAG+AGG | 0.632824 | 6.1:+31295515 | MS.gene83962:intron |
ATACAAGATCGATCAGTGGA+GGG | 0.641541 | 6.1:+31296397 | MS.gene83962:CDS |
CAGCAACGGGAGAATGTCAA+CGG | 0.647505 | 6.1:+31296484 | MS.gene83962:CDS |
TTCTATACAAGATCGATCAG+TGG | 0.652183 | 6.1:+31296393 | MS.gene83962:CDS |
TCTCTCGAATGCTACTCAAG+GGG | 0.663851 | 6.1:+31295795 | MS.gene83962:CDS |
GAGATCCAACCATGTAGACA+GGG | 0.668526 | 6.1:-31296509 | None:intergenic |
ACATATCGCCTTTAAGGACA+GGG | 0.680203 | 6.1:-31296353 | None:intergenic |
CTCTCGAATGCTACTCAAGG+GGG | 0.692797 | 6.1:+31295796 | MS.gene83962:CDS |
AAATTGTAGAAATAACAGTG+AGG | 0.789611 | 6.1:+31296242 | MS.gene83962:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATATATATATAATAATAA+AGG | - | chr6.1:31291740-31291759 | None:intergenic | 0.0% |
!! | AATATTATTATTATTATGAG+CGG | + | chr6.1:31291851-31291870 | MS.gene83962:intron | 10.0% |
!! | ATATAATAATAAAGGAATAA+AGG | - | chr6.1:31291732-31291751 | None:intergenic | 10.0% |
!! | TATAATAATAAAGGAATAAA+GGG | - | chr6.1:31291731-31291750 | None:intergenic | 10.0% |
!! | TTAATTATATTATAAGTAGA+GGG | + | chr6.1:31293831-31293850 | MS.gene83962:intron | 10.0% |
!! | TTTAATTATATTATAAGTAG+AGG | + | chr6.1:31293830-31293849 | MS.gene83962:intron | 10.0% |
!!! | TTTTAAATTACAGAAAATTA+TGG | - | chr6.1:31295312-31295331 | None:intergenic | 10.0% |
!! | AAACGGAAAAAAAAAATTAA+GGG | - | chr6.1:31295946-31295965 | None:intergenic | 15.0% |
!! | ATAATAATTAGAGTGAAATT+AGG | - | chr6.1:31291529-31291548 | None:intergenic | 15.0% |
!! | ATCAATGTAAAACTAATTTA+TGG | + | chr6.1:31293766-31293785 | MS.gene83962:intron | 15.0% |
!! | TAAAAATAACAGTGTAATTT+AGG | + | chr6.1:31296144-31296163 | MS.gene83962:intron | 15.0% |
!! | TAATAATTAGAGTGAAATTA+GGG | - | chr6.1:31291528-31291547 | None:intergenic | 15.0% |
!! | TAATTATATTATAAGTAGAG+GGG | + | chr6.1:31293832-31293851 | MS.gene83962:intron | 15.0% |
!! | TATGTTCATTAAAGATATAT+CGG | - | chr6.1:31293617-31293636 | None:intergenic | 15.0% |
!! | TTATTGTCGAAAATTAATAT+AGG | + | chr6.1:31294996-31295015 | MS.gene83962:intron | 15.0% |
!!! | AAATTTGGAATTAACTAATT+AGG | - | chr6.1:31295095-31295114 | None:intergenic | 15.0% |
!!! | ATTTTTCTATTAGTTTGTTA+TGG | + | chr6.1:31291920-31291939 | MS.gene83962:intron | 15.0% |
!!! | GTAATTTAAAATATCATAAC+CGG | + | chr6.1:31295321-31295340 | MS.gene83962:intron | 15.0% |
!!! | TAAATTACACTGTTATTTTT+AGG | - | chr6.1:31296145-31296164 | None:intergenic | 15.0% |
!!! | TTTTAAATTTGAGATAATAG+TGG | + | chr6.1:31291990-31292009 | MS.gene83962:intron | 15.0% |
!!! | TTTTTCTATTAGTTTGTTAT+GGG | + | chr6.1:31291921-31291940 | MS.gene83962:intron | 15.0% |
!! | AAAGTAACATTTATAACTGA+AGG | - | chr6.1:31295979-31295998 | None:intergenic | 20.0% |
!! | AAATATACAGTTACAAATGT+GGG | + | chr6.1:31293710-31293729 | MS.gene83962:intron | 20.0% |
!! | AACGGAAAAAAAAAATTAAG+GGG | - | chr6.1:31295945-31295964 | None:intergenic | 20.0% |
!! | AAGTAACATTTATAACTGAA+GGG | - | chr6.1:31295978-31295997 | None:intergenic | 20.0% |
!! | AATAAATGTTCATTTCCATT+TGG | + | chr6.1:31291956-31291975 | MS.gene83962:intron | 20.0% |
!! | AGTTGTTTATTAGTAGAATT+CGG | + | chr6.1:31292732-31292751 | MS.gene83962:intron | 20.0% |
!! | ATAAGTATAGAAAAAAGTTC+AGG | - | chr6.1:31294130-31294149 | None:intergenic | 20.0% |
!! | ATTTACCATTTACTTAATGT+AGG | + | chr6.1:31294352-31294371 | MS.gene83962:intron | 20.0% |
!! | CATAATCAAAAAGAAAACAA+AGG | - | chr6.1:31296185-31296204 | None:intergenic | 20.0% |
!! | GAAACGGAAAAAAAAAATTA+AGG | - | chr6.1:31295947-31295966 | None:intergenic | 20.0% |
!! | GTGTAATGATTGTAATTTAA+GGG | + | chr6.1:31296082-31296101 | MS.gene83962:intron | 20.0% |
!! | TAAATATACAGTTACAAATG+TGG | + | chr6.1:31293709-31293728 | MS.gene83962:intron | 20.0% |
!! | TCATTAGTGTTATAAGTTAT+AGG | + | chr6.1:31295446-31295465 | MS.gene83962:intron | 20.0% |
!! | TGTGTAATGATTGTAATTTA+AGG | + | chr6.1:31296081-31296100 | MS.gene83962:intron | 20.0% |
!! | TTGAAAATTTGCATATGTAA+TGG | - | chr6.1:31292635-31292654 | None:intergenic | 20.0% |
!! | TTGAAAGTCTTAAATAGAAA+TGG | - | chr6.1:31293874-31293893 | None:intergenic | 20.0% |
!!! | AAAACTGTTTTCATTATTTC+TGG | - | chr6.1:31294570-31294589 | None:intergenic | 20.0% |
!!! | AATAATATTGAGCTATGTTT+TGG | - | chr6.1:31291840-31291859 | None:intergenic | 20.0% |
!!! | AATGATATGGTATAGATTTT+TGG | + | chr6.1:31292100-31292119 | MS.gene83962:intron | 20.0% |
!!! | GTATATTTAAAATGACGATA+TGG | - | chr6.1:31293698-31293717 | None:intergenic | 20.0% |
!!! | TATACTTATTTTGATGAACT+AGG | + | chr6.1:31294141-31294160 | MS.gene83962:intron | 20.0% |
!!! | TCTTCTACATTTTCAAAATT+TGG | - | chr6.1:31295110-31295129 | None:intergenic | 20.0% |
!!! | TTTGACATTTTCATTGTTTA+TGG | + | chr6.1:31294590-31294609 | MS.gene83962:intron | 20.0% |
!!! | TTTTTTTTAAACTCGGTATT+CGG | + | chr6.1:31291757-31291776 | MS.gene83962:intron | 20.0% |
! | AAACAATGTGGTTATAAGTT+GGG | - | chr6.1:31293050-31293069 | None:intergenic | 25.0% |
! | AAATTGTAGAAATAACAGTG+AGG | + | chr6.1:31296242-31296261 | MS.gene83962:CDS | 25.0% |
! | AACAAGAACATGTAACATAA+TGG | - | chr6.1:31294887-31294906 | None:intergenic | 25.0% |
! | AATATACAGTTACAAATGTG+GGG | + | chr6.1:31293711-31293730 | MS.gene83962:intron | 25.0% |
! | AGCAGAAAGATATTGAAAAA+CGG | + | chr6.1:31295203-31295222 | MS.gene83962:intron | 25.0% |
! | AGTAGAATTCGGTTATAATT+TGG | + | chr6.1:31292743-31292762 | MS.gene83962:intron | 25.0% |
! | ATTACAATCATTACACACTT+TGG | - | chr6.1:31296078-31296097 | None:intergenic | 25.0% |
! | ATTAGGGTTTAGTACTATAT+TGG | + | chr6.1:31292172-31292191 | MS.gene83962:intron | 25.0% |
! | CAAAATGAAACGTAAAAACT+TGG | + | chr6.1:31296107-31296126 | MS.gene83962:intron | 25.0% |
! | CAACTAAAATGTAGTTAGTT+AGG | + | chr6.1:31292036-31292055 | MS.gene83962:intron | 25.0% |
! | CTTCAAGAATAACTTAATGT+AGG | + | chr6.1:31294390-31294409 | MS.gene83962:intron | 25.0% |
! | GAAACCTAAAAATGACTTAA+GGG | - | chr6.1:31295915-31295934 | None:intergenic | 25.0% |
! | GAGTACAATATCAGATATTA+GGG | + | chr6.1:31292156-31292175 | MS.gene83962:intron | 25.0% |
! | GCGAATGTGTTTATAAATTA+GGG | - | chr6.1:31292817-31292836 | None:intergenic | 25.0% |
! | GTAGAATTCGGTTATAATTT+GGG | + | chr6.1:31292744-31292763 | MS.gene83962:intron | 25.0% |
! | TAACACTAATGAATTGTTCA+TGG | - | chr6.1:31295438-31295457 | None:intergenic | 25.0% |
! | TAATGGTTTATGCAATGATA+TGG | + | chr6.1:31292087-31292106 | MS.gene83962:intron | 25.0% |
! | TATAAATTACCAATGATTCG+AGG | + | chr6.1:31292684-31292703 | MS.gene83962:intron | 25.0% |
! | TCAGATATAAACCATTCTTA+GGG | + | chr6.1:31294419-31294438 | MS.gene83962:intron | 25.0% |
! | TCTGACATTTGATGAAAATA+TGG | - | chr6.1:31292843-31292862 | None:intergenic | 25.0% |
! | TGAAACCTAAAAATGACTTA+AGG | - | chr6.1:31295916-31295935 | None:intergenic | 25.0% |
! | TGAGTACAATATCAGATATT+AGG | + | chr6.1:31292155-31292174 | MS.gene83962:intron | 25.0% |
! | TGCAACATACCAAATAAATA+AGG | - | chr6.1:31293533-31293552 | None:intergenic | 25.0% |
! | TGCGAATGTGTTTATAAATT+AGG | - | chr6.1:31292818-31292837 | None:intergenic | 25.0% |
! | TGTGTAATTTAATTACCTGT+CGG | - | chr6.1:31291496-31291515 | None:intergenic | 25.0% |
! | TTAATATTTGTATTAGCAGC+AGG | + | chr6.1:31291569-31291588 | MS.gene83962:intron | 25.0% |
! | TTATAGGACAGAAATATTGA+AGG | - | chr6.1:31294917-31294936 | None:intergenic | 25.0% |
! | TTCACAAACAAAACCAAATT+GGG | + | chr6.1:31295736-31295755 | MS.gene83962:CDS | 25.0% |
! | TTCATTAAAGATATATCGGA+TGG | - | chr6.1:31293613-31293632 | None:intergenic | 25.0% |
! | TTGATCAAATAGATACCTTT+AGG | - | chr6.1:31295574-31295593 | None:intergenic | 25.0% |
! | TTGTAGACATTATTATGATG+AGG | + | chr6.1:31295476-31295495 | MS.gene83962:intron | 25.0% |
! | TTTAGGCTAAATTAAACCTT+TGG | + | chr6.1:31295888-31295907 | MS.gene83962:intron | 25.0% |
! | TTTCACAAACAAAACCAAAT+TGG | + | chr6.1:31295735-31295754 | MS.gene83962:CDS | 25.0% |
! | TTTGGAAGAACTTATGAATA+AGG | - | chr6.1:31293236-31293255 | None:intergenic | 25.0% |
! | TTTGGATTGTCTTGATATAA+TGG | + | chr6.1:31292070-31292089 | MS.gene83962:intron | 25.0% |
!! | ATTAGTTTAATGGACATTCA+AGG | + | chr6.1:31293651-31293670 | MS.gene83962:intron | 25.0% |
!! | CAAGTTTTTACGTTTCATTT+TGG | - | chr6.1:31296109-31296128 | None:intergenic | 25.0% |
!! | GATTCTGGATAAACATTTTT+GGG | + | chr6.1:31292944-31292963 | MS.gene83962:intron | 25.0% |
!! | GTCAGTGTAAATTAGTTTAA+TGG | + | chr6.1:31293641-31293660 | MS.gene83962:intron | 25.0% |
!! | GTTTGCATTGTGAAAATTTT+CGG | + | chr6.1:31294210-31294229 | MS.gene83962:intron | 25.0% |
!! | TAATTTAGGATATCTTGTTC+TGG | + | chr6.1:31296158-31296177 | MS.gene83962:intron | 25.0% |
!! | TATGTTTTCACAAAGTAAAC+AGG | + | chr6.1:31294703-31294722 | MS.gene83962:intron | 25.0% |
!! | TATTAGCTTATTCTTTGTGT+AGG | + | chr6.1:31294279-31294298 | MS.gene83962:intron | 25.0% |
!! | TGATTCTGGATAAACATTTT+TGG | + | chr6.1:31292943-31292962 | MS.gene83962:intron | 25.0% |
!! | TTAGTTTAATGGACATTCAA+GGG | + | chr6.1:31293652-31293671 | MS.gene83962:intron | 25.0% |
!! | TTGCGTACTATTTATCTTTT+AGG | + | chr6.1:31295871-31295890 | MS.gene83962:intron | 25.0% |
!!! | CTAACTAACTACATTTTAGT+TGG | - | chr6.1:31292038-31292057 | None:intergenic | 25.0% |
!!! | GTTATTTTTAGGTTTCACTT+TGG | - | chr6.1:31296134-31296153 | None:intergenic | 25.0% |
!!! | TGAGTTTTTTTTGCAATTCT+TGG | + | chr6.1:31293918-31293937 | MS.gene83962:intron | 25.0% |
AAAACTAAATCTACGCCAAA+TGG | - | chr6.1:31291974-31291993 | None:intergenic | 30.0% | |
AAAGAAAGAGGAAACTTCAT+TGG | + | chr6.1:31294091-31294110 | MS.gene83962:CDS | 30.0% | |
AACAAGTAATTGCAACATGT+TGG | - | chr6.1:31295395-31295414 | None:intergenic | 30.0% | |
AATGTTTATCCAGAATCAGT+TGG | - | chr6.1:31292941-31292960 | None:intergenic | 30.0% | |
AATTAGAGTGAAATTAGGGA+AGG | - | chr6.1:31291524-31291543 | None:intergenic | 30.0% | |
ACAACGTTTCACAAAGTAAA+CGG | - | chr6.1:31294446-31294465 | None:intergenic | 30.0% | |
ACATTTACTTGCAAAACACT+TGG | - | chr6.1:31294965-31294984 | None:intergenic | 30.0% | |
ACTTCAAGAAAACTTACTGT+AGG | + | chr6.1:31294304-31294323 | MS.gene83962:intron | 30.0% | |
AGAATCAACTAGCTGTAAAA+AGG | - | chr6.1:31293411-31293430 | None:intergenic | 30.0% | |
AGATCTAGGTATTAGAAACT+TGG | + | chr6.1:31292970-31292989 | MS.gene83962:intron | 30.0% | |
ATATGGCATGGAAAAATGAA+GGG | - | chr6.1:31293681-31293700 | None:intergenic | 30.0% | |
ATGTTTATCCAGAATCAGTT+GGG | - | chr6.1:31292940-31292959 | None:intergenic | 30.0% | |
ATTAGAGTGAAATTAGGGAA+GGG | - | chr6.1:31291523-31291542 | None:intergenic | 30.0% | |
ATTATGGGCTTGAAAAAGAT+AGG | + | chr6.1:31295698-31295717 | MS.gene83962:CDS | 30.0% | |
ATTTACATAGCTCTCAATGA+TGG | - | chr6.1:31293194-31293213 | None:intergenic | 30.0% | |
CAAACAATGTGGTTATAAGT+TGG | - | chr6.1:31293051-31293070 | None:intergenic | 30.0% | |
CAACTTATAACCACATTGTT+TGG | + | chr6.1:31293049-31293068 | MS.gene83962:intron | 30.0% | |
CAAGAAAAATCATCTGGAAA+TGG | + | chr6.1:31294059-31294078 | MS.gene83962:CDS | 30.0% | |
CAGAAAATTATGGCCAAATA+TGG | - | chr6.1:31295302-31295321 | None:intergenic | 30.0% | |
CTAAAATGTAGTTAGTTAGG+TGG | + | chr6.1:31292039-31292058 | MS.gene83962:intron | 30.0% | |
CTATGCAACAACTACTATTA+AGG | - | chr6.1:31293329-31293348 | None:intergenic | 30.0% | |
GAATCAACTAGCTGTAAAAA+GGG | - | chr6.1:31293410-31293429 | None:intergenic | 30.0% | |
GATCTAGGTATTAGAAACTT+GGG | + | chr6.1:31292971-31292990 | MS.gene83962:intron | 30.0% | |
GATTGAACCATCAAATTAGT+CGG | - | chr6.1:31291787-31291806 | None:intergenic | 30.0% | |
GCAACTACTCATATATTTGT+AGG | + | chr6.1:31295143-31295162 | MS.gene83962:intron | 30.0% | |
GGCAAAATGATGAATCTATA+AGG | + | chr6.1:31292462-31292481 | MS.gene83962:intron | 30.0% | |
GGTTGATTGTTCATATAAGT+AGG | + | chr6.1:31292483-31292502 | MS.gene83962:intron | 30.0% | |
GTCAGATATAAACCATTCTT+AGG | + | chr6.1:31294418-31294437 | MS.gene83962:intron | 30.0% | |
GTCCAACATTGGATAAAATA+TGG | - | chr6.1:31293075-31293094 | None:intergenic | 30.0% | |
TAAAATATGGCCAAACAATG+TGG | - | chr6.1:31293062-31293081 | None:intergenic | 30.0% | |
TAATGAATTGTTCATGGTCA+AGG | - | chr6.1:31295432-31295451 | None:intergenic | 30.0% | |
TAATTAGTGTCCAAAGTTCA+GGG | - | chr6.1:31295072-31295091 | None:intergenic | 30.0% | |
TATGGTTGATTGAGTGTTAT+AGG | - | chr6.1:31294933-31294952 | None:intergenic | 30.0% | |
TATTATTATGAGCGGAAAGA+TGG | + | chr6.1:31291859-31291878 | MS.gene83962:intron | 30.0% | |
TCATAAGTTCTTCCAAATTG+TGG | + | chr6.1:31293239-31293258 | MS.gene83962:intron | 30.0% | |
TGATGAAGTGAATGATGTAA+AGG | - | chr6.1:31293804-31293823 | None:intergenic | 30.0% | |
TTGACTCTGACTTACAAAAT+TGG | + | chr6.1:31292773-31292792 | MS.gene83962:intron | 30.0% | |
! | AAATTGCCAGGCTTTAATAT+GGG | + | chr6.1:31295034-31295053 | MS.gene83962:intron | 30.0% |
! | AATAGACAAGATTTTCCCAT+CGG | - | chr6.1:31294263-31294282 | None:intergenic | 30.0% |
! | GTGTGACTACCTTATTTATT+TGG | + | chr6.1:31293521-31293540 | MS.gene83962:CDS | 30.0% |
! | TATAGTGATAATGATGTCCA+GGG | - | chr6.1:31295371-31295390 | None:intergenic | 30.0% |
! | TTAAGTTGTTTATCCAAGCA+TGG | - | chr6.1:31292710-31292729 | None:intergenic | 30.0% |
! | TTTAAAATGACGATATGGCA+TGG | - | chr6.1:31293693-31293712 | None:intergenic | 30.0% |
! | TTTAGGATGATATTGTCAAG+AGG | + | chr6.1:31295515-31295534 | MS.gene83962:intron | 30.0% |
! | TTTGAAGTGAATCATTGTGA+TGG | + | chr6.1:31294511-31294530 | MS.gene83962:intron | 30.0% |
! | TTTGTACAAAGGCTTTTTGT+CGG | + | chr6.1:31293491-31293510 | MS.gene83962:CDS | 30.0% |
!! | TTTTACTTGTTAACAAGCAC+AGG | - | chr6.1:31294651-31294670 | None:intergenic | 30.0% |
!!! | AGCTATGTTTTGGCTTTAAA+TGG | - | chr6.1:31291830-31291849 | None:intergenic | 30.0% |
!!! | GCTTTTAGAATTTGTATCAC+AGG | - | chr6.1:31295613-31295632 | None:intergenic | 30.0% |
!!! | TTACTCTATTGTTTTTGCCA+AGG | + | chr6.1:31294034-31294053 | MS.gene83962:intron | 30.0% |
AAAACCAAATTGGGATCAAC+CGG | + | chr6.1:31295745-31295764 | MS.gene83962:CDS | 35.0% | |
AAAATGACTTAAGGGACCAA+AGG | - | chr6.1:31295907-31295926 | None:intergenic | 35.0% | |
AAATGTAGTTAGTTAGGTGG+TGG | + | chr6.1:31292042-31292061 | MS.gene83962:intron | 35.0% | |
AACACTTGGCTTACAAGTTA+TGG | - | chr6.1:31294951-31294970 | None:intergenic | 35.0% | |
AAGAACAAGCTAAACCTATG+AGG | - | chr6.1:31294742-31294761 | None:intergenic | 35.0% | |
AAGGCACAAGAAAAATCATC+TGG | + | chr6.1:31294053-31294072 | MS.gene83962:intron | 35.0% | |
ACATCATTCACTTCATCACT+TGG | + | chr6.1:31293806-31293825 | MS.gene83962:intron | 35.0% | |
ACTTGTAAAAGCAAATTGCC+AGG | + | chr6.1:31295022-31295041 | MS.gene83962:intron | 35.0% | |
AGAGGAAACTTCATTGGATA+TGG | + | chr6.1:31294097-31294116 | MS.gene83962:CDS | 35.0% | |
AGGTATTAGAAACTTGGGTT+GGG | + | chr6.1:31292976-31292995 | MS.gene83962:intron | 35.0% | |
AGTGGCCTACATTAAGTAAA+TGG | - | chr6.1:31294360-31294379 | None:intergenic | 35.0% | |
AGTTCGTCAAATGTTTCCTA+TGG | - | chr6.1:31296030-31296049 | None:intergenic | 35.0% | |
ATCAATAACTATTGACCGCT+TGG | - | chr6.1:31294856-31294875 | None:intergenic | 35.0% | |
CACAGCAAGTACATGTAAAA+TGG | - | chr6.1:31292137-31292156 | None:intergenic | 35.0% | |
CATTCAGAAATCTGTCACAT+TGG | - | chr6.1:31294330-31294349 | None:intergenic | 35.0% | |
CTGAAGGGACTAAAATGAAA+CGG | - | chr6.1:31295963-31295982 | None:intergenic | 35.0% | |
CTGATTACTATGGTACTTGT+CGG | + | chr6.1:31296532-31296551 | MS.gene83962:CDS | 35.0% | |
CTTTACAGGTCATGCATTAT+GGG | + | chr6.1:31295683-31295702 | MS.gene83962:CDS | 35.0% | |
GAAAAATCATCTGGAAATGG+TGG | + | chr6.1:31294062-31294081 | MS.gene83962:CDS | 35.0% | |
GAACTAGGCACTAGTAAATT+AGG | + | chr6.1:31294156-31294175 | MS.gene83962:intron | 35.0% | |
GAATGGTTTATATCTGACAG+TGG | - | chr6.1:31294416-31294435 | None:intergenic | 35.0% | |
GACCGTTAATATATTCCCAA+GGG | - | chr6.1:31292411-31292430 | None:intergenic | 35.0% | |
GAGGATTGAAGAAAGACTTT+CGG | + | chr6.1:31295534-31295553 | MS.gene83962:CDS | 35.0% | |
GATATGGCATGGAAAAATGA+AGG | - | chr6.1:31293682-31293701 | None:intergenic | 35.0% | |
GTAATTAGTGTCCAAAGTTC+AGG | - | chr6.1:31295073-31295092 | None:intergenic | 35.0% | |
TAGGTATTAGAAACTTGGGT+TGG | + | chr6.1:31292975-31292994 | MS.gene83962:intron | 35.0% | |
TATAAGGCTGAGTAAGAGTT+AGG | - | chr6.1:31293002-31293021 | None:intergenic | 35.0% | |
TCTTGAAGTTATTCTGACAG+TGG | - | chr6.1:31294378-31294397 | None:intergenic | 35.0% | |
TCTTGTCAGGAGATGTATTT+AGG | - | chr6.1:31296314-31296333 | None:intergenic | 35.0% | |
TGGTATTTATAGCCCTTTGT+GGG | + | chr6.1:31292221-31292240 | MS.gene83962:intron | 35.0% | |
TTAGCAGCAGGAAAGAATTA+AGG | + | chr6.1:31291581-31291600 | MS.gene83962:intron | 35.0% | |
TTCTATACAAGATCGATCAG+TGG | + | chr6.1:31296393-31296412 | MS.gene83962:CDS | 35.0% | |
TTGAAGAAAGACTTTCGGTT+TGG | + | chr6.1:31295539-31295558 | MS.gene83962:CDS | 35.0% | |
TTTGTATCACAGGCAAATAC+TGG | - | chr6.1:31295603-31295622 | None:intergenic | 35.0% | |
! | AGATGATTTTTCTTGTGCCT+TGG | - | chr6.1:31294054-31294073 | None:intergenic | 35.0% |
! | ATAGTGATAATGATGTCCAG+GGG | - | chr6.1:31295370-31295389 | None:intergenic | 35.0% |
! | CAAATTGCCAGGCTTTAATA+TGG | + | chr6.1:31295033-31295052 | MS.gene83962:intron | 35.0% |
! | CATTTTTCATTCGAGTCCAT+AGG | + | chr6.1:31296011-31296030 | MS.gene83962:intron | 35.0% |
! | CTATAGTGATAATGATGTCC+AGG | - | chr6.1:31295372-31295391 | None:intergenic | 35.0% |
! | GGCCATATTTTATCCAATGT+TGG | + | chr6.1:31293070-31293089 | MS.gene83962:intron | 35.0% |
! | GTTCTACACTGTTCTGTTTT+AGG | + | chr6.1:31295498-31295517 | MS.gene83962:intron | 35.0% |
! | GTTTGGACTTTTCTTCCTAA+AGG | + | chr6.1:31295556-31295575 | MS.gene83962:CDS | 35.0% |
! | TGTAGGGTCTTTTTGTACAA+AGG | + | chr6.1:31293480-31293499 | MS.gene83962:intron | 35.0% |
! | TGTTCATTGTTTTCACCGAT+GGG | + | chr6.1:31294245-31294264 | MS.gene83962:intron | 35.0% |
! | TTGTTCATTGTTTTCACCGA+TGG | + | chr6.1:31294244-31294263 | MS.gene83962:intron | 35.0% |
!! | ACATGTACTGATTGTGTCTT+AGG | + | chr6.1:31294792-31294811 | MS.gene83962:intron | 35.0% |
!! | ACCTCAAAGTCGGTTTTATA+AGG | - | chr6.1:31293018-31293037 | None:intergenic | 35.0% |
!! | AGGTTGACTTGGTTCTTAAT+TGG | + | chr6.1:31294812-31294831 | MS.gene83962:intron | 35.0% |
!! | TTCTTGTTCCTTTTGCTGTA+GGG | + | chr6.1:31293464-31293483 | MS.gene83962:intron | 35.0% |
!! | TTTCTTGTTCCTTTTGCTGT+AGG | + | chr6.1:31293463-31293482 | MS.gene83962:intron | 35.0% |
!!! | ACATTTTTGGGTTGAGATCT+AGG | + | chr6.1:31292956-31292975 | MS.gene83962:intron | 35.0% |
!!! | TGGTCCCTTAAGTCATTTTT+AGG | + | chr6.1:31295908-31295927 | MS.gene83962:intron | 35.0% |
AAGATGATAGTTGTCCAGCT+TGG | + | chr6.1:31296460-31296479 | MS.gene83962:CDS | 40.0% | |
AAGTAAACGGACCCTAAGAA+TGG | - | chr6.1:31294433-31294452 | None:intergenic | 40.0% | |
AAGTGCTAAGAGTCCAACAT+TGG | - | chr6.1:31293086-31293105 | None:intergenic | 40.0% | |
AATTACCTGTCGGAGAAAGA+AGG | - | chr6.1:31291486-31291505 | None:intergenic | 40.0% | |
AGAACTGCATTCCCTTTAAC+TGG | - | chr6.1:31296276-31296295 | None:intergenic | 40.0% | |
AGAATCACTGTTGCCATCAA+AGG | - | chr6.1:31295772-31295791 | None:intergenic | 40.0% | |
AGATGATAGTTGTCCAGCTT+GGG | + | chr6.1:31296461-31296480 | MS.gene83962:CDS | 40.0% | |
AGGGCTATAAATACCACTCT+TGG | - | chr6.1:31292217-31292236 | None:intergenic | 40.0% | |
AGGTTCTCCAACCAGTTAAA+GGG | + | chr6.1:31296262-31296281 | MS.gene83962:CDS | 40.0% | |
ATACAAGATCGATCAGTGGA+GGG | + | chr6.1:31296397-31296416 | MS.gene83962:CDS | 40.0% | |
ATCTCTCGAATGCTACTCAA+GGG | + | chr6.1:31295794-31295813 | MS.gene83962:CDS | 40.0% | |
ATGGGCTTGAAAAAGATAGG+CGG | + | chr6.1:31295701-31295720 | MS.gene83962:CDS | 40.0% | |
CAAAAAGACCCTACAGCAAA+AGG | - | chr6.1:31293475-31293494 | None:intergenic | 40.0% | |
CACTCTTGGAATCATTCTCA+AGG | - | chr6.1:31292203-31292222 | None:intergenic | 40.0% | |
CCATAATGCATGACCTGTAA+AGG | - | chr6.1:31295685-31295704 | None:intergenic | 40.0% | |
CCTTTACAGGTCATGCATTA+TGG | + | chr6.1:31295682-31295701 | MS.gene83962:CDS | 40.0% | |
CGACAAGTACCATAGTAATC+AGG | - | chr6.1:31296534-31296553 | None:intergenic | 40.0% | |
CTTGAGAATGATTCCAAGAG+TGG | + | chr6.1:31292201-31292220 | MS.gene83962:intron | 40.0% | |
GAAAACCTTCACCTCAAAGT+CGG | - | chr6.1:31293028-31293047 | None:intergenic | 40.0% | |
GGACCGTTAATATATTCCCA+AGG | - | chr6.1:31292412-31292431 | None:intergenic | 40.0% | |
GGCCCTTGGGAATATATTAA+CGG | + | chr6.1:31292406-31292425 | MS.gene83962:intron | 40.0% | |
GTGGTATTTATAGCCCTTTG+TGG | + | chr6.1:31292220-31292239 | MS.gene83962:intron | 40.0% | |
GTTGGATCTCCTGATTACTA+TGG | + | chr6.1:31296522-31296541 | MS.gene83962:CDS | 40.0% | |
TATACAAGATCGATCAGTGG+AGG | + | chr6.1:31296396-31296415 | MS.gene83962:CDS | 40.0% | |
TATTGACCGCTTGGTAGAAA+AGG | - | chr6.1:31294847-31294866 | None:intergenic | 40.0% | |
TCATTGCTGCAACCACAATT+TGG | - | chr6.1:31293254-31293273 | None:intergenic | 40.0% | |
TGGGAAAAAACCCTGAACTT+TGG | + | chr6.1:31295059-31295078 | MS.gene83962:intron | 40.0% | |
TGGTGGCTATTCAAAGAAAG+AGG | + | chr6.1:31294079-31294098 | MS.gene83962:CDS | 40.0% | |
TTGGTATGTTGCAGTCTCAT+TGG | + | chr6.1:31293540-31293559 | MS.gene83962:intron | 40.0% | |
! | ACATATCGCCTTTAAGGACA+GGG | - | chr6.1:31296356-31296375 | None:intergenic | 40.0% |
! | AGTTAGGTGGTGGTTAACTT+TGG | + | chr6.1:31292052-31292071 | MS.gene83962:intron | 40.0% |
! | ATGCTTCTAGAAGCTGACTA+AGG | + | chr6.1:31292307-31292326 | MS.gene83962:intron | 40.0% |
! | ATGTTGCAGTCTCATTGGTT+TGG | + | chr6.1:31293545-31293564 | MS.gene83962:intron | 40.0% |
! | CAAAGGCTTTTTGTCGGATA+AGG | + | chr6.1:31293497-31293516 | MS.gene83962:CDS | 40.0% |
! | CCAGGCTTTAATATGGGATT+GGG | + | chr6.1:31295040-31295059 | MS.gene83962:intron | 40.0% |
! | GCCTTATAAAACCGACTTTG+AGG | + | chr6.1:31293014-31293033 | MS.gene83962:intron | 40.0% |
! | GCTTCGTGATTCTTGATAGT+GGG | + | chr6.1:31293282-31293301 | MS.gene83962:intron | 40.0% |
!! | CTTCGTGATTCTTGATAGTG+GGG | + | chr6.1:31293283-31293302 | MS.gene83962:intron | 40.0% |
!! | GATTGTGTCTTAGGTTGACT+TGG | + | chr6.1:31294801-31294820 | MS.gene83962:intron | 40.0% |
!! | TAAAACCGACTTTGAGGTGA+AGG | + | chr6.1:31293020-31293039 | MS.gene83962:intron | 40.0% |
!! | TTCTAGAAGCATCTAGAAGC+AGG | - | chr6.1:31292299-31292318 | None:intergenic | 40.0% |
!! | TTGAAGAAAGTACCTGACCT+TGG | - | chr6.1:31291700-31291719 | None:intergenic | 40.0% |
AACCCTCTTTCCTGAATCAG+TGG | + | chr6.1:31295822-31295841 | MS.gene83962:CDS | 45.0% | |
ACCTTGGTTGCCAAGAGATT+TGG | - | chr6.1:31291684-31291703 | None:intergenic | 45.0% | |
ACTTAAGCTCCAAGCAAGCT+GGG | + | chr6.1:31292258-31292277 | MS.gene83962:intron | 45.0% | |
AGAGAACAGCAAGCCTTTAC+AGG | + | chr6.1:31295669-31295688 | MS.gene83962:intron | 45.0% | |
ATCACAGGCAAATACTGGTG+TGG | - | chr6.1:31295598-31295617 | None:intergenic | 45.0% | |
ATTTATAGCCCTTTGTGGGC+TGG | + | chr6.1:31292225-31292244 | MS.gene83962:intron | 45.0% | |
ATTTGACCAGCTGCTACTCT+TGG | - | chr6.1:31296226-31296245 | None:intergenic | 45.0% | |
CAAGAATCACGAAGCGATTG+TGG | - | chr6.1:31293277-31293296 | None:intergenic | 45.0% | |
CACGTGTTGTCCAAATCTCT+TGG | + | chr6.1:31291671-31291690 | MS.gene83962:CDS | 45.0% | |
CAGACCACATATCGCCTTTA+AGG | - | chr6.1:31296362-31296381 | None:intergenic | 45.0% | |
CATAATGGCTCCAAAGGACT+AGG | - | chr6.1:31292354-31292373 | None:intergenic | 45.0% | |
CATCTCTCGAATGCTACTCA+AGG | + | chr6.1:31295793-31295812 | MS.gene83962:CDS | 45.0% | |
CCCAATCCCATATTAAAGCC+TGG | - | chr6.1:31295043-31295062 | None:intergenic | 45.0% | |
CGCTTCGTGATTCTTGATAG+TGG | + | chr6.1:31293281-31293300 | MS.gene83962:intron | 45.0% | |
CTGCATTCCCTTTAACTGGT+TGG | - | chr6.1:31296272-31296291 | None:intergenic | 45.0% | |
CTGTCCTTAAAGGCGATATG+TGG | + | chr6.1:31296355-31296374 | MS.gene83962:CDS | 45.0% | |
CTTTAAATGGACCCCTCAAG+TGG | - | chr6.1:31291817-31291836 | None:intergenic | 45.0% | |
GAAGAAGGTGATGAGGAGAA+AGG | - | chr6.1:31291445-31291464 | None:intergenic | 45.0% | |
GAGATCCAACCATGTAGACA+GGG | - | chr6.1:31296512-31296531 | None:intergenic | 45.0% | |
GAGATTTGGACAACACGTGA+AGG | - | chr6.1:31291670-31291689 | None:intergenic | 45.0% | |
GAGGTTCTCCAACCAGTTAA+AGG | + | chr6.1:31296261-31296280 | MS.gene83962:CDS | 45.0% | |
GCTCTTACGTTTCACCTCAT+AGG | + | chr6.1:31294725-31294744 | MS.gene83962:intron | 45.0% | |
GGGGTGATGTGGCAAAATAA+AGG | + | chr6.1:31293730-31293749 | MS.gene83962:intron | 45.0% | |
GTGGTTGCATCAGCCATATT+TGG | + | chr6.1:31295286-31295305 | MS.gene83962:intron | 45.0% | |
GTTACAAATGTGGGGTGATG+TGG | + | chr6.1:31293719-31293738 | MS.gene83962:intron | 45.0% | |
TAACACCTTCTTTCTCCGAC+AGG | + | chr6.1:31291478-31291497 | MS.gene83962:CDS | 45.0% | |
TCCAAATCTCTTGGCAACCA+AGG | + | chr6.1:31291680-31291699 | MS.gene83962:CDS | 45.0% | |
TCCTGAATCAGTGGTGAGTA+CGG | + | chr6.1:31295831-31295850 | MS.gene83962:intron | 45.0% | |
TCTCTCGAATGCTACTCAAG+GGG | + | chr6.1:31295795-31295814 | MS.gene83962:CDS | 45.0% | |
TGGACCATCTGCATTCCTAA+AGG | - | chr6.1:31292615-31292634 | None:intergenic | 45.0% | |
! | CACATATCGCCTTTAAGGAC+AGG | - | chr6.1:31296357-31296376 | None:intergenic | 45.0% |
! | CTTCTAGAAGCTGACTAAGG+CGG | + | chr6.1:31292310-31292329 | MS.gene83962:intron | 45.0% |
! | GCCAGGCTTTAATATGGGAT+TGG | + | chr6.1:31295039-31295058 | MS.gene83962:intron | 45.0% |
! | GTGCTTTCAGATGCTTGCTA+GGG | + | chr6.1:31292530-31292549 | MS.gene83962:intron | 45.0% |
! | TGCTTTCAGATGCTTGCTAG+GGG | + | chr6.1:31292531-31292550 | MS.gene83962:intron | 45.0% |
! | TGTGCCTTTAGGAATGCAGA+TGG | + | chr6.1:31292608-31292627 | MS.gene83962:intron | 45.0% |
!! | AAGAAGGTGTTAGAAGCGAG+AGG | - | chr6.1:31291470-31291489 | None:intergenic | 45.0% |
!! | AGAAGGTGTTAGAAGCGAGA+GGG | - | chr6.1:31291469-31291488 | None:intergenic | 45.0% |
!! | CACCACTGATTCAGGAAAGA+GGG | - | chr6.1:31295827-31295846 | None:intergenic | 45.0% |
!! | CTAGTCCTTTGGAGCCATTA+TGG | + | chr6.1:31292352-31292371 | MS.gene83962:intron | 45.0% |
!! | TCACCACTGATTCAGGAAAG+AGG | - | chr6.1:31295828-31295847 | None:intergenic | 45.0% |
!! | TCCTTTGGAGCCATTATGGA+GGG | + | chr6.1:31292356-31292375 | MS.gene83962:intron | 45.0% |
!!! | GAGGTTTTAAACTGTGGTCG+CGG | - | chr6.1:31295348-31295367 | None:intergenic | 45.0% |
!!! | ATATATATTTTTTTTAAACT+CGG | + | chr6.1:31291750-31291769 | MS.gene83962:intron | 5.0% |
AAATGGACCCCTCAAGTGGA+CGG | - | chr6.1:31291813-31291832 | None:intergenic | 50.0% | |
AAGGCACAGATGCCTCAAGA+AGG | - | chr6.1:31292596-31292615 | None:intergenic | 50.0% | |
AATCTCACCGTCCACTTGAG+GGG | + | chr6.1:31291803-31291822 | MS.gene83962:intron | 50.0% | |
ACGGTCTGCAATCGCAATTG+TGG | + | chr6.1:31295222-31295241 | MS.gene83962:intron | 50.0% | |
AGAGGGTGAAGAAGGTGATG+AGG | - | chr6.1:31291452-31291471 | None:intergenic | 50.0% | |
AGGGAAAGTCTCAACTACGC+TGG | + | chr6.1:31296416-31296435 | MS.gene83962:CDS | 50.0% | |
AGGTCCGGTTGATCCCAATT+TGG | - | chr6.1:31295752-31295771 | None:intergenic | 50.0% | |
ATCTCTTGGCAACCAAGGTC+AGG | + | chr6.1:31291685-31291704 | MS.gene83962:intron | 50.0% | |
CAACCACACTGACACAGTCA+CGG | - | chr6.1:31295273-31295292 | None:intergenic | 50.0% | |
CAAGCATGGCCTCGAATCAT+TGG | - | chr6.1:31292696-31292715 | None:intergenic | 50.0% | |
CAATCTCACCGTCCACTTGA+GGG | + | chr6.1:31291802-31291821 | MS.gene83962:intron | 50.0% | |
CAATGATTCGAGGCCATGCT+TGG | + | chr6.1:31292694-31292713 | MS.gene83962:intron | 50.0% | |
CACTGTTGCCATCAAAGGTC+CGG | - | chr6.1:31295767-31295786 | None:intergenic | 50.0% | |
CAGCAACGGGAGAATGTCAA+CGG | + | chr6.1:31296484-31296503 | MS.gene83962:CDS | 50.0% | |
CGGCGAACCGACTAATTTGA+TGG | + | chr6.1:31291777-31291796 | MS.gene83962:intron | 50.0% | |
CGTGCTTTCAGATGCTTGCT+AGG | + | chr6.1:31292529-31292548 | MS.gene83962:intron | 50.0% | |
CTCTCGAATGCTACTCAAGG+GGG | + | chr6.1:31295796-31295815 | MS.gene83962:CDS | 50.0% | |
GACTTAAGCTCCAAGCAAGC+TGG | + | chr6.1:31292257-31292276 | MS.gene83962:intron | 50.0% | |
GCGTGTAAGCTACTCTTGTC+AGG | - | chr6.1:31296327-31296346 | None:intergenic | 50.0% | |
GGAGATCCAACCATGTAGAC+AGG | - | chr6.1:31296513-31296532 | None:intergenic | 50.0% | |
TAAGCACGAGTCTTGGGACA+AGG | + | chr6.1:31292441-31292460 | MS.gene83962:intron | 50.0% | |
TAGAAGCGAGAGGGTGAAGA+AGG | - | chr6.1:31291460-31291479 | None:intergenic | 50.0% | |
TCAACGGAACCCTGTCTACA+TGG | + | chr6.1:31296500-31296519 | MS.gene83962:CDS | 50.0% | |
TCAATCTCACCGTCCACTTG+AGG | + | chr6.1:31291801-31291820 | MS.gene83962:intron | 50.0% | |
TGCAATCGCAATTGTGGCTG+CGG | + | chr6.1:31295228-31295247 | MS.gene83962:intron | 50.0% | |
TGTAGGTCCTAACCTGCTCT+CGG | + | chr6.1:31295160-31295179 | MS.gene83962:intron | 50.0% | |
TGTCCCAAGACTCGTGCTTA+GGG | - | chr6.1:31292441-31292460 | None:intergenic | 50.0% | |
TTGTCCCAAGACTCGTGCTT+AGG | - | chr6.1:31292442-31292461 | None:intergenic | 50.0% | |
TTTAAACTGTGGTCGCGGTC+CGG | - | chr6.1:31295343-31295362 | None:intergenic | 50.0% | |
TTTCCGTGACTGTGTCAGTG+TGG | + | chr6.1:31295267-31295286 | MS.gene83962:intron | 50.0% | |
! | CCACAGTTTAAAACCTCCCC+TGG | + | chr6.1:31295351-31295370 | MS.gene83962:intron | 50.0% |
! | CCAGAGCCTTTTCTACCAAG+CGG | + | chr6.1:31294838-31294857 | MS.gene83962:intron | 50.0% |
! | CTTGAGGCATCTGTGCCTTT+AGG | + | chr6.1:31292597-31292616 | MS.gene83962:intron | 50.0% |
! | GATCTAAAGCCCAGCTTGCT+TGG | - | chr6.1:31292270-31292289 | None:intergenic | 50.0% |
! | GCTTTCAGATGCTTGCTAGG+GGG | + | chr6.1:31292532-31292551 | MS.gene83962:intron | 50.0% |
! | GTGATAATGATGTCCAGGGG+AGG | - | chr6.1:31295367-31295386 | None:intergenic | 50.0% |
!! | GTCCTTTGGAGCCATTATGG+AGG | + | chr6.1:31292355-31292374 | MS.gene83962:intron | 50.0% |
!!! | CCAGGGGAGGTTTTAAACTG+TGG | - | chr6.1:31295354-31295373 | None:intergenic | 50.0% |
AAAGCCCTCCAGAAAGGCTC+AGG | - | chr6.1:31292384-31292403 | None:intergenic | 55.0% | |
AAGAAGGCTCCCTGAAGCTC+GGG | - | chr6.1:31292580-31292599 | None:intergenic | 55.0% | |
ACGCTGTAACCAGCCCACAA+AGG | - | chr6.1:31292237-31292256 | None:intergenic | 55.0% | |
AGCTTCAGGGAGCCTTCTTG+AGG | + | chr6.1:31292581-31292600 | MS.gene83962:intron | 55.0% | |
CAAGAAGGCTCCCTGAAGCT+CGG | - | chr6.1:31292581-31292600 | None:intergenic | 55.0% | |
CACAGACCAAGAGTAGCAGC+TGG | + | chr6.1:31296217-31296236 | MS.gene83962:intron | 55.0% | |
CAGCTGCTACTCTTGGTCTG+TGG | - | chr6.1:31296219-31296238 | None:intergenic | 55.0% | |
CAGTTGGGCAACCTGCTATC+AGG | - | chr6.1:31292925-31292944 | None:intergenic | 55.0% | |
CCGCTTGGTAGAAAAGGCTC+TGG | - | chr6.1:31294841-31294860 | None:intergenic | 55.0% | |
CGCTGTAACCAGCCCACAAA+GGG | - | chr6.1:31292236-31292255 | None:intergenic | 55.0% | |
CGGAACCCTGTCTACATGGT+TGG | + | chr6.1:31296504-31296523 | MS.gene83962:CDS | 55.0% | |
GCCCTCCATAATGGCTCCAA+AGG | - | chr6.1:31292360-31292379 | None:intergenic | 55.0% | |
GCTCGATGCCCTGTCCTTAA+AGG | + | chr6.1:31296345-31296364 | MS.gene83962:CDS | 55.0% | |
GGGATCAACCGGACCTTTGA+TGG | + | chr6.1:31295756-31295775 | MS.gene83962:CDS | 55.0% | |
GTCACCGCTATCAGACCACT+CGG | - | chr6.1:31292903-31292922 | None:intergenic | 55.0% | |
GTCCCAAGACTCGTGCTTAG+GGG | - | chr6.1:31292440-31292459 | None:intergenic | 55.0% | |
TCACCGCTATCAGACCACTC+GGG | - | chr6.1:31292902-31292921 | None:intergenic | 55.0% | |
TCCCAAGACTCGTGCTTAGG+GGG | - | chr6.1:31292439-31292458 | None:intergenic | 55.0% | |
TTGTCCAGCTTGGGCAGCAA+CGG | + | chr6.1:31296470-31296489 | MS.gene83962:CDS | 55.0% | |
! | AGCCTTTCTGGAGGGCTTTC+AGG | + | chr6.1:31292385-31292404 | MS.gene83962:intron | 55.0% |
! | GATAGCGGTGACCTGATAGC+AGG | + | chr6.1:31292911-31292930 | MS.gene83962:intron | 55.0% |
! | GCAGGTTGCCCAACTGATTC+TGG | + | chr6.1:31292929-31292948 | MS.gene83962:intron | 55.0% |
! | TTCAGATGCTTGCTAGGGGG+CGG | + | chr6.1:31292535-31292554 | MS.gene83962:intron | 55.0% |
!! | GCCGTACTCACCACTGATTC+AGG | - | chr6.1:31295835-31295854 | None:intergenic | 55.0% |
ACTCGGGCCATGCTCCAGAT+GGG | - | chr6.1:31292886-31292905 | None:intergenic | 60.0% | |
AGCAGAGCCGAGAGCAGGTT+AGG | - | chr6.1:31295170-31295189 | None:intergenic | 60.0% | |
AGCCCCCTAAGCACGAGTCT+TGG | + | chr6.1:31292434-31292453 | MS.gene83962:intron | 60.0% | |
AGGGACACACCCGAGCTTCA+GGG | + | chr6.1:31292568-31292587 | MS.gene83962:intron | 60.0% | |
ATGCTCCAGATGGGCGTGAG+GGG | - | chr6.1:31292877-31292896 | None:intergenic | 60.0% | |
CAAACAGCAGAGCCGAGAGC+AGG | - | chr6.1:31295175-31295194 | None:intergenic | 60.0% | |
CATGCTCCAGATGGGCGTGA+GGG | - | chr6.1:31292878-31292897 | None:intergenic | 60.0% | |
GAGCGGAAAGATGGACGCGT+GGG | + | chr6.1:31291868-31291887 | MS.gene83962:intron | 60.0% | |
GCCCCCTAAGCACGAGTCTT+GGG | + | chr6.1:31292435-31292454 | MS.gene83962:intron | 60.0% | |
GGCCTGAAAGCCCTCCAGAA+AGG | - | chr6.1:31292390-31292409 | None:intergenic | 60.0% | |
TGAGCGGAAAGATGGACGCG+TGG | + | chr6.1:31291867-31291886 | MS.gene83962:intron | 60.0% | |
TGGAGGGCTTTCAGGCCCTT+GGG | + | chr6.1:31292393-31292412 | MS.gene83962:intron | 60.0% | |
TGGCCCGAGTGGTCTGATAG+CGG | + | chr6.1:31292896-31292915 | MS.gene83962:intron | 60.0% | |
TGTCCAGCTTGGGCAGCAAC+GGG | + | chr6.1:31296471-31296490 | MS.gene83962:CDS | 60.0% | |
ACTAAGGCGGCGCCTCTGGA+AGG | + | chr6.1:31292323-31292342 | MS.gene83962:intron | 65.0% | |
CACTCGGGCCATGCTCCAGA+TGG | - | chr6.1:31292887-31292906 | None:intergenic | 65.0% | |
CCATGCTCCAGATGGGCGTG+AGG | - | chr6.1:31292879-31292898 | None:intergenic | 65.0% | |
CTGGAGGGCTTTCAGGCCCT+TGG | + | chr6.1:31292392-31292411 | MS.gene83962:intron | 65.0% | |
GACTCGTGCTTAGGGGGCTG+TGG | - | chr6.1:31292433-31292452 | None:intergenic | 65.0% | |
GAGGGACACACCCGAGCTTC+AGG | + | chr6.1:31292567-31292586 | MS.gene83962:intron | 65.0% | |
GGCGCCTGAGCCTTTCTGGA+GGG | + | chr6.1:31292377-31292396 | MS.gene83962:intron | 65.0% | |
GGCTCAGGCGCCCTCCATAA+TGG | - | chr6.1:31292369-31292388 | None:intergenic | 65.0% | |
TACACCCCCTCACGCCCATC+TGG | + | chr6.1:31292869-31292888 | MS.gene83962:intron | 65.0% | |
TCTCCCGTTGCTGCCCAAGC+TGG | - | chr6.1:31296477-31296496 | None:intergenic | 65.0% | |
TGCTCCAGATGGGCGTGAGG+GGG | - | chr6.1:31292876-31292895 | None:intergenic | 65.0% | |
! | CATCTGGAGCATGGCCCGAG+TGG | + | chr6.1:31292885-31292904 | MS.gene83962:intron | 65.0% |
! | CCTCACGCCCATCTGGAGCA+TGG | + | chr6.1:31292876-31292895 | MS.gene83962:intron | 65.0% |
! | CTAAGGCGGCGCCTCTGGAA+GGG | + | chr6.1:31292324-31292343 | MS.gene83962:intron | 65.0% |
! | GAAGGGCGCGCCTAGTCCTT+TGG | + | chr6.1:31292341-31292360 | MS.gene83962:intron | 65.0% |
CTCGGGTGTGTCCCTCCGAG+AGG | - | chr6.1:31292563-31292582 | None:intergenic | 70.0% | |
GACTAGGCGCGCCCTTCCAG+AGG | - | chr6.1:31292338-31292357 | None:intergenic | 70.0% | |
GCTGACTAAGGCGGCGCCTC+TGG | + | chr6.1:31292319-31292338 | MS.gene83962:intron | 70.0% | |
GGGCGCCTGAGCCTTTCTGG+AGG | + | chr6.1:31292376-31292395 | MS.gene83962:intron | 70.0% | |
TGCTAGGGGGCGGTGCCTCT+CGG | + | chr6.1:31292545-31292564 | MS.gene83962:intron | 70.0% | |
!! | GGAGGGCGCCTGAGCCTTTC+TGG | + | chr6.1:31292373-31292392 | MS.gene83962:intron | 70.0% |
AGGGGGCGGTGCCTCTCGGA+GGG | + | chr6.1:31292549-31292568 | MS.gene83962:intron | 75.0% | |
TAGGGGGCGGTGCCTCTCGG+AGG | + | chr6.1:31292548-31292567 | MS.gene83962:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 31291429 | 31296575 | 31291429 | ID=MS.gene83962 |
chr6.1 | mRNA | 31291429 | 31296575 | 31291429 | ID=MS.gene83962.t1;Parent=MS.gene83962 |
chr6.1 | exon | 31291429 | 31291499 | 31291429 | ID=MS.gene83962.t1.exon1;Parent=MS.gene83962.t1 |
chr6.1 | CDS | 31291429 | 31291499 | 31291429 | ID=cds.MS.gene83962.t1;Parent=MS.gene83962.t1 |
chr6.1 | exon | 31291588 | 31291701 | 31291588 | ID=MS.gene83962.t1.exon2;Parent=MS.gene83962.t1 |
chr6.1 | CDS | 31291588 | 31291701 | 31291588 | ID=cds.MS.gene83962.t1;Parent=MS.gene83962.t1 |
chr6.1 | exon | 31293485 | 31293542 | 31293485 | ID=MS.gene83962.t1.exon3;Parent=MS.gene83962.t1 |
chr6.1 | CDS | 31293485 | 31293542 | 31293485 | ID=cds.MS.gene83962.t1;Parent=MS.gene83962.t1 |
chr6.1 | exon | 31294056 | 31294121 | 31294056 | ID=MS.gene83962.t1.exon4;Parent=MS.gene83962.t1 |
chr6.1 | CDS | 31294056 | 31294121 | 31294056 | ID=cds.MS.gene83962.t1;Parent=MS.gene83962.t1 |
chr6.1 | exon | 31295520 | 31295577 | 31295520 | ID=MS.gene83962.t1.exon5;Parent=MS.gene83962.t1 |
chr6.1 | CDS | 31295520 | 31295577 | 31295520 | ID=cds.MS.gene83962.t1;Parent=MS.gene83962.t1 |
chr6.1 | exon | 31295671 | 31295843 | 31295671 | ID=MS.gene83962.t1.exon6;Parent=MS.gene83962.t1 |
chr6.1 | CDS | 31295671 | 31295843 | 31295671 | ID=cds.MS.gene83962.t1;Parent=MS.gene83962.t1 |
chr6.1 | exon | 31296222 | 31296575 | 31296222 | ID=MS.gene83962.t1.exon7;Parent=MS.gene83962.t1 |
chr6.1 | CDS | 31296222 | 31296575 | 31296222 | ID=cds.MS.gene83962.t1;Parent=MS.gene83962.t1 |
Gene Sequence |
Protein sequence |