Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84237.t1 | RHN51853.1 | 42.6 | 455 | 129 | 8 | 97 | 421 | 54 | 506 | 3.00E-87 | 332.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84237.t1 | A0A396HGY8 | 42.6 | 455 | 129 | 8 | 97 | 421 | 54 | 506 | 2.2e-87 | 332.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057026 | MS.gene84237 | 0.817218 | 3.70E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84237.t1 | MTR_0091s0080 | 39.091 | 440 | 140 | 8 | 96 | 421 | 53 | 478 | 8.81e-93 | 288 |
| MS.gene84237.t1 | MTR_0091s0080 | 33.333 | 186 | 85 | 2 | 60 | 206 | 266 | 451 | 8.86e-30 | 120 |
| MS.gene84237.t1 | MTR_0091s0090 | 41.627 | 209 | 63 | 4 | 258 | 407 | 1 | 209 | 4.97e-40 | 144 |
| MS.gene84237.t1 | MTR_0091s0090 | 35.789 | 95 | 61 | 0 | 112 | 206 | 99 | 193 | 3.94e-18 | 84.3 |
| MS.gene84237.t1 | MTR_6g465600 | 56.198 | 121 | 41 | 2 | 6 | 114 | 2 | 122 | 2.01e-35 | 133 |
| MS.gene84237.t1 | MTR_6g465600 | 31.469 | 143 | 83 | 4 | 62 | 192 | 137 | 276 | 2.24e-11 | 65.1 |
| MS.gene84237.t1 | MTR_7g050355 | 38.426 | 216 | 88 | 6 | 10 | 197 | 6 | 204 | 1.21e-33 | 133 |
| MS.gene84237.t1 | MTR_4g082235 | 52.326 | 86 | 31 | 2 | 6 | 81 | 2 | 87 | 1.89e-20 | 90.1 |
| MS.gene84237.t1 | MTR_1g023840 | 49.533 | 107 | 33 | 3 | 288 | 373 | 1 | 107 | 4.55e-20 | 86.3 |
| MS.gene84237.t1 | MTR_1g023840 | 37.975 | 79 | 49 | 0 | 109 | 187 | 28 | 106 | 1.92e-13 | 67.8 |
| MS.gene84237.t1 | MTR_1g052720 | 39.316 | 117 | 56 | 3 | 10 | 114 | 6 | 119 | 7.71e-19 | 87.0 |
| MS.gene84237.t1 | MTR_1g052720 | 35.802 | 81 | 51 | 1 | 117 | 197 | 197 | 276 | 1.29e-13 | 71.6 |
| MS.gene84237.t1 | MTR_6g033605 | 78.378 | 37 | 8 | 0 | 343 | 379 | 75 | 111 | 4.21e-14 | 68.9 |
| MS.gene84237.t1 | MTR_6g033605 | 34.177 | 79 | 51 | 1 | 118 | 195 | 34 | 112 | 1.39e-11 | 61.6 |
| MS.gene84237.t1 | MTR_8g064960 | 45.070 | 71 | 38 | 1 | 117 | 187 | 30 | 99 | 6.64e-14 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 103 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATGAACATTGCTGATTTA+AGG | 0.160523 | 3.1:-35287474 | MS.gene84237:CDS |
| ACCTCTACCTCATTATTTCT+TGG | 0.242037 | 3.1:+35290021 | None:intergenic |
| CGTGCGTTACAGCTAGCTTT+AGG | 0.262590 | 3.1:+35289463 | None:intergenic |
| GATTATGTCCTGGTGCTTGC+AGG | 0.264324 | 3.1:+35289398 | None:intergenic |
| GTTCCCAAAGTGTTCATTCT+TGG | 0.270363 | 3.1:+35291284 | None:intergenic |
| CCGTTTCATATTATATTCAT+AGG | 0.282936 | 3.1:-35287840 | MS.gene84237:intron |
| CACTGGACTCTCTTCCTAAC+TGG | 0.283570 | 3.1:+35287415 | None:intergenic |
| ATAGGAGGAACACATTTATT+AGG | 0.284579 | 3.1:+35287967 | None:intergenic |
| GATTTCTACAACATTGATAT+TGG | 0.285700 | 3.1:-35289940 | MS.gene84237:CDS |
| GTGCGTTACAGCTAGCTTTA+GGG | 0.286663 | 3.1:+35289464 | None:intergenic |
| CATCAAACCTATTTGTTCAT+AGG | 0.290954 | 3.1:+35289900 | None:intergenic |
| ACTCTTACCTATGAACAAAT+AGG | 0.305163 | 3.1:-35289907 | MS.gene84237:intron |
| CAAGAACATGTTCGAGGTTA+AGG | 0.317039 | 3.1:-35288129 | MS.gene84237:CDS |
| CAGAGGCGTTAGGAAGGATT+TGG | 0.349208 | 3.1:-35290575 | MS.gene84237:CDS |
| GATCAAAGTCGTTGATTACT+TGG | 0.353170 | 3.1:-35289601 | MS.gene84237:CDS |
| GAATGGGTGGTTTGGCTTGA+AGG | 0.358568 | 3.1:-35289962 | MS.gene84237:CDS |
| ACCTCGAACATGTTCTTGTT+AGG | 0.359147 | 3.1:+35288134 | None:intergenic |
| AAATAATGAGGTAGAGGTTC+AGG | 0.361957 | 3.1:-35290016 | MS.gene84237:CDS |
| GGAATGGTATTCTTCATATA+AGG | 0.364171 | 3.1:-35287537 | MS.gene84237:CDS |
| GAGAAATTTCATCTGCTATA+CGG | 0.365583 | 3.1:+35289221 | None:intergenic |
| TGCATCATGCTGCCATCATT+TGG | 0.367757 | 3.1:+35287928 | None:intergenic |
| TTGATCTCAGTTTCCTTAGT+TGG | 0.368759 | 3.1:+35289618 | None:intergenic |
| TGCCTAGATGCTGCTGAGGC+AGG | 0.370072 | 3.1:-35289354 | MS.gene84237:CDS |
| CCTTTGCAGTGCATTCATAA+AGG | 0.376742 | 3.1:-35287508 | MS.gene84237:CDS |
| CCTGGTGCTTGCAGGGAATA+GGG | 0.384926 | 3.1:+35289406 | None:intergenic |
| TTCTTCAAGAATGGGTGGTT+TGG | 0.386728 | 3.1:-35289970 | MS.gene84237:CDS |
| AACAAAGTATTCTTCAAGAA+TGG | 0.387611 | 3.1:-35289979 | MS.gene84237:CDS |
| GGAGTGATCATCTTTGATAT+AGG | 0.388625 | 3.1:+35287949 | None:intergenic |
| TTCAAAATCGGAGGTGGGTG+GGG | 0.397294 | 3.1:-35289525 | MS.gene84237:CDS |
| CAACATTGATATTGGTGCTT+GGG | 0.414236 | 3.1:-35289932 | MS.gene84237:CDS |
| TTTGAAGGATTGGAGGTGAC+TGG | 0.416212 | 3.1:-35287630 | MS.gene84237:intron |
| AATGAATTGGTGTTCAAAAT+CGG | 0.418504 | 3.1:-35289537 | MS.gene84237:CDS |
| ACACAGGTCGTGTCTTGGTT+TGG | 0.420195 | 3.1:-35287763 | MS.gene84237:intron |
| TCCTGGTGCTTGCAGGGAAT+AGG | 0.422432 | 3.1:+35289405 | None:intergenic |
| TTGCTTGGAAGTGCTCATTT+CGG | 0.424691 | 3.1:-35289575 | MS.gene84237:CDS |
| CTTATGTGCAGCGCGTAACT+TGG | 0.437374 | 3.1:-35287602 | MS.gene84237:CDS |
| ACTTCTCGCAGTGCCCAGTT+AGG | 0.447865 | 3.1:-35287429 | MS.gene84237:CDS |
| TCAGAGTGCATTGCCAACTA+AGG | 0.455280 | 3.1:-35289631 | MS.gene84237:CDS |
| GCCTAGATGCTGCTGAGGCA+GGG | 0.460290 | 3.1:-35289353 | MS.gene84237:CDS |
| GATAGCTGAATCACATTTGT+GGG | 0.464015 | 3.1:+35287721 | None:intergenic |
| ACAAAGTATTCTTCAAGAAT+GGG | 0.467715 | 3.1:-35289978 | MS.gene84237:CDS |
| TGATTTAAGGCATGTGTACC+AGG | 0.468839 | 3.1:-35287461 | MS.gene84237:CDS |
| ACAACATTGATATTGGTGCT+TGG | 0.474591 | 3.1:-35289933 | MS.gene84237:CDS |
| TTGATTACTTGGGATTTGCT+TGG | 0.481601 | 3.1:-35289590 | MS.gene84237:CDS |
| CTGGGCACTGCGAGAAGTAA+TGG | 0.484915 | 3.1:+35287434 | None:intergenic |
| CTTAAACACAGGTCGTGTCT+TGG | 0.494570 | 3.1:-35287768 | MS.gene84237:intron |
| AGGGAATAGGGACATGCCTC+AGG | 0.494745 | 3.1:+35289418 | None:intergenic |
| CCCTATTCCCTGCAAGCACC+AGG | 0.497957 | 3.1:-35289406 | MS.gene84237:CDS |
| GTTCAAAATCGGAGGTGGGT+GGG | 0.498607 | 3.1:-35289526 | MS.gene84237:CDS |
| CCATGGGCTTGATTATGTCC+TGG | 0.501232 | 3.1:+35289388 | None:intergenic |
| AGACAGATCAGGAGTGGAAG+TGG | 0.502826 | 3.1:-35287995 | MS.gene84237:intron |
| CACATTATTGCAAAGCCCAC+TGG | 0.502855 | 3.1:+35287398 | None:intergenic |
| GAGCCAAGAATGAACACTTT+GGG | 0.504993 | 3.1:-35291287 | MS.gene84237:CDS |
| AGAGCCAAGAATGAACACTT+TGG | 0.505329 | 3.1:-35291288 | MS.gene84237:CDS |
| ACATCTTCTGACATCGACTC+TGG | 0.507031 | 3.1:-35287877 | MS.gene84237:CDS |
| TGTCGAGGCAGAAAATGAAT+TGG | 0.513746 | 3.1:-35289550 | MS.gene84237:CDS |
| GGGAGATTGACAGAGGCGTT+AGG | 0.515400 | 3.1:-35290585 | MS.gene84237:CDS |
| ATATCGCACCAGCAGCTTCA+CGG | 0.517086 | 3.1:+35291241 | None:intergenic |
| AAGATGATCACTCCAAATGA+TGG | 0.517981 | 3.1:-35287940 | MS.gene84237:CDS |
| ACCCTGCCTCAGCAGCATCT+AGG | 0.519643 | 3.1:+35289352 | None:intergenic |
| ATCAAAGTCGTTGATTACTT+GGG | 0.521003 | 3.1:-35289600 | MS.gene84237:CDS |
| TTACAGCTAGCTTTAGGGGA+TGG | 0.523709 | 3.1:+35289469 | None:intergenic |
| ATTATGTCCTGGTGCTTGCA+GGG | 0.524628 | 3.1:+35289399 | None:intergenic |
| AGATAGCTGAATCACATTTG+TGG | 0.527393 | 3.1:+35287720 | None:intergenic |
| CCTATGAATATAATATGAAA+CGG | 0.533707 | 3.1:+35287840 | None:intergenic |
| GATCTCTTTGCAAGGCGCGT+AGG | 0.536164 | 3.1:-35289503 | MS.gene84237:CDS |
| TCCAAGAAATAATGAGGTAG+AGG | 0.546351 | 3.1:-35290022 | MS.gene84237:CDS |
| CAGTTCAAGGCAATGCTGGT+GGG | 0.551373 | 3.1:-35290606 | MS.gene84237:CDS |
| TCAACAGTTCAAGGCAATGC+TGG | 0.551498 | 3.1:-35290610 | MS.gene84237:intron |
| ACTGGACTCTCTTCCTAACT+GGG | 0.553386 | 3.1:+35287416 | None:intergenic |
| AGTTCAAGGCAATGCTGGTG+GGG | 0.555031 | 3.1:-35290605 | MS.gene84237:CDS |
| ACAGTTCAAGGCAATGCTGG+TGG | 0.568317 | 3.1:-35290607 | MS.gene84237:intron |
| GTCAAGGACCGTGAAGCTGC+TGG | 0.569242 | 3.1:-35291249 | MS.gene84237:CDS |
| TTGCTGTCACCGAAAATACA+AGG | 0.570074 | 3.1:-35287558 | MS.gene84237:CDS |
| TGCGTTACAGCTAGCTTTAG+GGG | 0.570487 | 3.1:+35289465 | None:intergenic |
| GATTGACAGAGGCGTTAGGA+AGG | 0.571222 | 3.1:-35290581 | MS.gene84237:CDS |
| TGTTCAAAATCGGAGGTGGG+TGG | 0.571285 | 3.1:-35289527 | MS.gene84237:CDS |
| GTGATCATCTTTGATATAGG+AGG | 0.572297 | 3.1:+35287952 | None:intergenic |
| TCCTAACAAGAACATGTTCG+AGG | 0.576589 | 3.1:-35288135 | MS.gene84237:CDS |
| AAGTATTCTTCAAGAATGGG+TGG | 0.580631 | 3.1:-35289975 | MS.gene84237:CDS |
| TTGGTGTTCAAAATCGGAGG+TGG | 0.594982 | 3.1:-35289531 | MS.gene84237:CDS |
| ATGTGATCCAAGAAATAATG+AGG | 0.600386 | 3.1:-35290028 | MS.gene84237:CDS |
| GAACTTTACTATGTGTGTCA+AGG | 0.604975 | 3.1:-35291265 | MS.gene84237:CDS |
| GTCACCGAAAATACAAGGAA+TGG | 0.606721 | 3.1:-35287553 | MS.gene84237:CDS |
| CCAGGACATAATCAAGCCCA+TGG | 0.607425 | 3.1:-35289388 | MS.gene84237:CDS |
| TGGGTGGGGATCTCTTTGCA+AGG | 0.608753 | 3.1:-35289511 | MS.gene84237:CDS |
| CCTTTATGAATGCACTGCAA+AGG | 0.610680 | 3.1:+35287508 | None:intergenic |
| CATAAAAGACAGATCAGGAG+TGG | 0.611114 | 3.1:-35288001 | MS.gene84237:intron |
| GCGAGAAGTAATGGTTAACC+TGG | 0.615011 | 3.1:+35287443 | None:intergenic |
| AGTTAGGAAGAGAGTCCAGT+GGG | 0.621104 | 3.1:-35287413 | MS.gene84237:CDS |
| AGTTTGCCTAGATGCTGCTG+AGG | 0.622272 | 3.1:-35289358 | MS.gene84237:CDS |
| GCAGCGCGTAACTTGGTCAA+AGG | 0.623770 | 3.1:-35287595 | MS.gene84237:CDS |
| TATGTCGTACTCCATGTGAA+AGG | 0.628216 | 3.1:+35290540 | None:intergenic |
| TGGTGTTCAAAATCGGAGGT+GGG | 0.630322 | 3.1:-35289530 | MS.gene84237:CDS |
| GTGCTCATTTCGGATTGTCG+AGG | 0.634872 | 3.1:-35289565 | MS.gene84237:CDS |
| TAACTTTCGAACCTTTCACA+TGG | 0.635597 | 3.1:-35290551 | MS.gene84237:CDS |
| GAATTGGTGTTCAAAATCGG+AGG | 0.651998 | 3.1:-35289534 | MS.gene84237:CDS |
| GGTGCGATATGTTTGATGAA+AGG | 0.666358 | 3.1:-35291228 | MS.gene84237:intron |
| CAGTTAGGAAGAGAGTCCAG+TGG | 0.670342 | 3.1:-35287414 | MS.gene84237:CDS |
| AGAACAAAGTTGTCTACCTG+AGG | 0.673391 | 3.1:-35289434 | MS.gene84237:CDS |
| AAAGCTAGCTGTAACGCACG+AGG | 0.709573 | 3.1:-35289460 | MS.gene84237:CDS |
| GCTGGTGGGGAGATTGACAG+AGG | 0.714727 | 3.1:-35290592 | MS.gene84237:CDS |
| GTCTTGGTTTGGTTTCTGCG+AGG | 0.718724 | 3.1:-35287752 | MS.gene84237:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATCAAACAATATAAA+AGG | + | chr3.1:35289053-35289072 | None:intergenic | 10.0% |
| !! | AGAAATCAGTTTATAAATTA+TGG | + | chr3.1:35289882-35289901 | None:intergenic | 15.0% |
| !! | CAAATAAGAATAAAAACTAA+CGG | + | chr3.1:35288135-35288154 | None:intergenic | 15.0% |
| !! | TAAGAAAATATATATCAGTT+AGG | - | chr3.1:35290136-35290155 | MS.gene84237:intron | 15.0% |
| !! | TTAAAATCATATCCAAAATA+AGG | + | chr3.1:35290265-35290284 | None:intergenic | 15.0% |
| !! | TTGTTTAATACATTAACATA+TGG | - | chr3.1:35287948-35287967 | MS.gene84237:CDS | 15.0% |
| !!! | AAATTTTTTGTTAACATGAA+TGG | - | chr3.1:35288405-35288424 | MS.gene84237:intron | 15.0% |
| !!! | AACTTACTTATTTTTGAAAT+AGG | - | chr3.1:35290283-35290302 | MS.gene84237:intron | 15.0% |
| !!! | AATTTTTTGTTAACATGAAT+GGG | - | chr3.1:35288406-35288425 | MS.gene84237:intron | 15.0% |
| !!! | ATAATTTATAAACTGATTTC+TGG | - | chr3.1:35289881-35289900 | MS.gene84237:intron | 15.0% |
| !!! | ATATTTTAGAATCTTGATTA+TGG | - | chr3.1:35290969-35290988 | MS.gene84237:intron | 15.0% |
| !!! | ATTTTATAAAAACTAATGTG+CGG | - | chr3.1:35290076-35290095 | MS.gene84237:intron | 15.0% |
| !! | AAACACATCATAAAAAGAAA+TGG | + | chr3.1:35288494-35288513 | None:intergenic | 20.0% |
| !! | AAATAAAATGCAAACTTCTT+TGG | + | chr3.1:35289699-35289718 | None:intergenic | 20.0% |
| !! | ATGCATTAAGAATATATGTT+TGG | - | chr3.1:35288690-35288709 | MS.gene84237:intron | 20.0% |
| !! | CATTAATCTACATCAAATAT+GGG | + | chr3.1:35288610-35288629 | None:intergenic | 20.0% |
| !! | CCTATGAATATAATATGAAA+CGG | + | chr3.1:35290946-35290965 | None:intergenic | 20.0% |
| !! | TATCCTAAATAAACAAAGTT+GGG | - | chr3.1:35289789-35289808 | MS.gene84237:intron | 20.0% |
| !! | TCATTAATCTACATCAAATA+TGG | + | chr3.1:35288611-35288630 | None:intergenic | 20.0% |
| !! | TTAGTGTAATACATGTATAT+TGG | - | chr3.1:35288444-35288463 | MS.gene84237:intron | 20.0% |
| !! | TTATCCTAAATAAACAAAGT+TGG | - | chr3.1:35289788-35289807 | MS.gene84237:intron | 20.0% |
| !!! | AATACTATATTTTGAAGGAT+TGG | - | chr3.1:35291143-35291162 | MS.gene84237:intron | 20.0% |
| !!! | ATTTCTTTTTATGATGTGTT+TGG | - | chr3.1:35288493-35288512 | MS.gene84237:intron | 20.0% |
| !!! | CAGATAATACTATATTTTGA+AGG | - | chr3.1:35291138-35291157 | MS.gene84237:intron | 20.0% |
| !!! | TAAGAATATATGTTTGGTTT+TGG | - | chr3.1:35288696-35288715 | MS.gene84237:intron | 20.0% |
| ! | AATAATGATCACTTTGATGT+AGG | - | chr3.1:35288556-35288575 | MS.gene84237:intron | 25.0% |
| ! | ACATTAACATATGGACATTA+TGG | - | chr3.1:35287957-35287976 | MS.gene84237:CDS | 25.0% |
| ! | ATACATAAAAAACATGTCGT+CGG | + | chr3.1:35290546-35290565 | None:intergenic | 25.0% |
| ! | CCGTTTCATATTATATTCAT+AGG | - | chr3.1:35290943-35290962 | MS.gene84237:intron | 25.0% |
| ! | GAAATGGATCATACATTAAA+TGG | + | chr3.1:35288478-35288497 | None:intergenic | 25.0% |
| ! | GATTTCTACAACATTGATAT+TGG | - | chr3.1:35288843-35288862 | MS.gene84237:intron | 25.0% |
| ! | GGTCATATTTGAATTATCAA+TGG | + | chr3.1:35287646-35287665 | None:intergenic | 25.0% |
| ! | TGTACCATGAATAGAAATTA+AGG | + | chr3.1:35290334-35290353 | None:intergenic | 25.0% |
| ! | TTAAGAATGCATCAGTTATA+CGG | + | chr3.1:35290504-35290523 | None:intergenic | 25.0% |
| ! | TTTATGTATATATCAGCTGA+AGG | - | chr3.1:35290557-35290576 | MS.gene84237:CDS | 25.0% |
| ! | TTTATGTCAATGTAGTTCAT+TGG | - | chr3.1:35288961-35288980 | MS.gene84237:intron | 25.0% |
| !! | AAAACAATTTTCTGCAACTT+TGG | - | chr3.1:35287756-35287775 | MS.gene84237:CDS | 25.0% |
| !! | AAACAAAACCAAATACCTTT+TGG | + | chr3.1:35289462-35289481 | None:intergenic | 25.0% |
| !! | AACAAAACCAAATACCTTTT+GGG | + | chr3.1:35289461-35289480 | None:intergenic | 25.0% |
| !! | AACAAAGTATTCTTCAAGAA+TGG | - | chr3.1:35288804-35288823 | MS.gene84237:intron | 25.0% |
| !! | AATACCATTCCTTGTATTTT+CGG | + | chr3.1:35291237-35291256 | None:intergenic | 25.0% |
| !! | AATGAATTGGTGTTCAAAAT+CGG | - | chr3.1:35289246-35289265 | MS.gene84237:intron | 25.0% |
| !! | ACAAAGTATTCTTCAAGAAT+GGG | - | chr3.1:35288805-35288824 | MS.gene84237:intron | 25.0% |
| !! | ATAACTAATTAGTTTCGGAA+TGG | + | chr3.1:35290430-35290449 | None:intergenic | 25.0% |
| !! | ATTCCCAACTTTGTTTATTT+AGG | + | chr3.1:35289795-35289814 | None:intergenic | 25.0% |
| !! | ATTTATAAACTGATTTCTGG+AGG | - | chr3.1:35289884-35289903 | MS.gene84237:intron | 25.0% |
| !! | TATGCATTTTCTCAATTGAA+TGG | + | chr3.1:35289653-35289672 | None:intergenic | 25.0% |
| !!! | AGAAAATTGTTTTGTGAGTT+TGG | + | chr3.1:35287749-35287768 | None:intergenic | 25.0% |
| !!! | ATATATGTTTGGTTTTGGAA+AGG | - | chr3.1:35288701-35288720 | MS.gene84237:intron | 25.0% |
| !!! | GAATCTCTGCAATATTTTTA+AGG | - | chr3.1:35290158-35290177 | MS.gene84237:intron | 25.0% |
| !!! | TGTACTTTTTATCTCATGAA+AGG | - | chr3.1:35287716-35287735 | MS.gene84237:intron | 25.0% |
| !!! | TTAAGCTTTAAGTAATAGCA+GGG | + | chr3.1:35290119-35290138 | None:intergenic | 25.0% |
| AAGCTTGAAACAATTGATAG+TGG | + | chr3.1:35290200-35290219 | None:intergenic | 30.0% | |
| AAGTTTATGATATGTGCTAC+TGG | - | chr3.1:35288311-35288330 | MS.gene84237:intron | 30.0% | |
| ACTCTTACCTATGAACAAAT+AGG | - | chr3.1:35288876-35288895 | MS.gene84237:intron | 30.0% | |
| ATAATATCAAAGTTGGATCG+TGG | - | chr3.1:35288938-35288957 | MS.gene84237:intron | 30.0% | |
| ATAGGAGGAACACATTTATT+AGG | + | chr3.1:35290819-35290838 | None:intergenic | 30.0% | |
| ATATATTTGGCAGTGTGATA+TGG | - | chr3.1:35291103-35291122 | MS.gene84237:intron | 30.0% | |
| ATGAACAAATAGGTTTGATG+AGG | - | chr3.1:35288886-35288905 | MS.gene84237:intron | 30.0% | |
| ATGTGATCCAAGAAATAATG+AGG | - | chr3.1:35288755-35288774 | MS.gene84237:intron | 30.0% | |
| ATTCCTATTCTCTTAAACAC+AGG | - | chr3.1:35291004-35291023 | MS.gene84237:intron | 30.0% | |
| ATTTCTATTCATGGTACAAG+AGG | - | chr3.1:35290336-35290355 | MS.gene84237:intron | 30.0% | |
| CAAAATCAGAAACACTTAAG+TGG | - | chr3.1:35287840-35287859 | MS.gene84237:intron | 30.0% | |
| CACAGATTTCATGATATAAG+AGG | + | chr3.1:35287816-35287835 | None:intergenic | 30.0% | |
| CATAAGGTTTGATTCTACAT+AGG | + | chr3.1:35290754-35290773 | None:intergenic | 30.0% | |
| CATCAAACCTATTTGTTCAT+AGG | + | chr3.1:35288886-35288905 | None:intergenic | 30.0% | |
| CGATCCAACTTTGATATTAT+TGG | + | chr3.1:35288938-35288957 | None:intergenic | 30.0% | |
| GAGAAATTTCATCTGCTATA+CGG | + | chr3.1:35289565-35289584 | None:intergenic | 30.0% | |
| GATGTAGATTAATGATCACT+TGG | - | chr3.1:35288616-35288635 | MS.gene84237:intron | 30.0% | |
| GATTACTCCAATTTGAATCA+AGG | + | chr3.1:35290030-35290049 | None:intergenic | 30.0% | |
| GGAATGGTATTCTTCATATA+AGG | - | chr3.1:35291246-35291265 | MS.gene84237:CDS | 30.0% | |
| GTGTGATATGGTATTCATTA+TGG | - | chr3.1:35291115-35291134 | MS.gene84237:intron | 30.0% | |
| TAAGAATGCATCAGTTATAC+GGG | + | chr3.1:35290503-35290522 | None:intergenic | 30.0% | |
| TAGATCAGCAAGGATATATT+TGG | - | chr3.1:35291090-35291109 | MS.gene84237:intron | 30.0% | |
| TATAGATGTATAGACAGTAC+TGG | - | chr3.1:35289752-35289771 | MS.gene84237:intron | 30.0% | |
| TATCTTGCCTTGATTCAAAT+TGG | - | chr3.1:35290020-35290039 | MS.gene84237:CDS | 30.0% | |
| TCCAACTTTGATATTATTGG+AGG | + | chr3.1:35288935-35288954 | None:intergenic | 30.0% | |
| TCCTCCAATAATATCAAAGT+TGG | - | chr3.1:35288931-35288950 | MS.gene84237:intron | 30.0% | |
| TGTCACTGATACAAATAGAT+GGG | - | chr3.1:35288654-35288673 | MS.gene84237:intron | 30.0% | |
| TTGTCACTGATACAAATAGA+TGG | - | chr3.1:35288653-35288672 | MS.gene84237:intron | 30.0% | |
| TTTGTCTGTCTATTTAAGTG+AGG | - | chr3.1:35287421-35287440 | MS.gene84237:CDS | 30.0% | |
| ! | ACAAAACCAAATACCTTTTG+GGG | + | chr3.1:35289460-35289479 | None:intergenic | 30.0% |
| ! | AGGCAAACTATTTTATCCAT+GGG | + | chr3.1:35289414-35289433 | None:intergenic | 30.0% |
| ! | ATCAAAGTCGTTGATTACTT+GGG | - | chr3.1:35289183-35289202 | MS.gene84237:intron | 30.0% |
| ! | ATGGCAGAATTTAGTTTATC+AGG | - | chr3.1:35289952-35289971 | MS.gene84237:CDS | 30.0% |
| ! | CTCGCATAACTAATTAGTTT+CGG | + | chr3.1:35290435-35290454 | None:intergenic | 30.0% |
| ! | CTTTTATGGTCATATGCATA+AGG | + | chr3.1:35290770-35290789 | None:intergenic | 30.0% |
| ! | TAGGCAAACTATTTTATCCA+TGG | + | chr3.1:35289415-35289434 | None:intergenic | 30.0% |
| ! | TGATGTTAACTCTGGATTTT+TGG | - | chr3.1:35289021-35289040 | MS.gene84237:intron | 30.0% |
| ! | TTTTGTTAACATGAATGGGT+GGG | - | chr3.1:35288410-35288429 | MS.gene84237:intron | 30.0% |
| ! | TTTTTGTTAACATGAATGGG+TGG | - | chr3.1:35288409-35288428 | MS.gene84237:intron | 30.0% |
| !! | ACTATATTTTGAAGGATTGG+AGG | - | chr3.1:35291146-35291165 | MS.gene84237:intron | 30.0% |
| !! | CACTTAAGTGTTTCTGATTT+TGG | + | chr3.1:35287842-35287861 | None:intergenic | 30.0% |
| !! | CTATGAACATTGCTGATTTA+AGG | - | chr3.1:35291309-35291328 | MS.gene84237:intron | 30.0% |
| !! | CTTAAGCTTTAAGTAATAGC+AGG | + | chr3.1:35290120-35290139 | None:intergenic | 30.0% |
| !! | TGAAACAATTGATAGTGGTT+AGG | + | chr3.1:35290195-35290214 | None:intergenic | 30.0% |
| AAAGTTGAATACCTACTACG+TGG | - | chr3.1:35289598-35289617 | MS.gene84237:CDS | 35.0% | |
| AAATAATGAGGTAGAGGTTC+AGG | - | chr3.1:35288767-35288786 | MS.gene84237:intron | 35.0% | |
| AAGATGATCACTCCAAATGA+TGG | - | chr3.1:35290843-35290862 | MS.gene84237:intron | 35.0% | |
| AAGTATTCTTCAAGAATGGG+TGG | - | chr3.1:35288808-35288827 | MS.gene84237:intron | 35.0% | |
| AATAGAAGTTGTTGAGCACA+TGG | + | chr3.1:35287929-35287948 | None:intergenic | 35.0% | |
| AATCCAAAATGAGAAACACG+AGG | - | chr3.1:35288079-35288098 | MS.gene84237:intron | 35.0% | |
| ACAACACACAAAAGAATGAC+AGG | + | chr3.1:35289485-35289504 | None:intergenic | 35.0% | |
| ACTGATATCTAATGAGCAGA+AGG | - | chr3.1:35289978-35289997 | MS.gene84237:CDS | 35.0% | |
| AGATAGCTGAATCACATTTG+TGG | + | chr3.1:35291066-35291085 | None:intergenic | 35.0% | |
| AGCATATGTCATTCTTCTGT+TGG | + | chr3.1:35290381-35290400 | None:intergenic | 35.0% | |
| ATAAAAACTAATGTGCGGAG+TGG | - | chr3.1:35290081-35290100 | MS.gene84237:intron | 35.0% | |
| ATGACCATAAAAGACAGATC+AGG | - | chr3.1:35290777-35290796 | MS.gene84237:intron | 35.0% | |
| CGAAACTAATTAGTTATGCG+AGG | - | chr3.1:35290433-35290452 | MS.gene84237:intron | 35.0% | |
| CGTGTAGCTTATTGTAAGTA+TGG | - | chr3.1:35289933-35289952 | MS.gene84237:CDS | 35.0% | |
| CTATCTATCATAGATCAGCA+AGG | - | chr3.1:35291080-35291099 | MS.gene84237:intron | 35.0% | |
| GAACTTTACTATGTGTGTCA+AGG | - | chr3.1:35287518-35287537 | MS.gene84237:CDS | 35.0% | |
| GATAGCTGAATCACATTTGT+GGG | + | chr3.1:35291065-35291084 | None:intergenic | 35.0% | |
| GCAGCCTTAATTTCTATTCA+TGG | - | chr3.1:35290327-35290346 | MS.gene84237:intron | 35.0% | |
| GGAGTGATCATCTTTGATAT+AGG | + | chr3.1:35290837-35290856 | None:intergenic | 35.0% | |
| GTGATCATCTTTGATATAGG+AGG | + | chr3.1:35290834-35290853 | None:intergenic | 35.0% | |
| GTTAAGGTCCACAAGAAAAA+TGG | - | chr3.1:35290670-35290689 | MS.gene84237:intron | 35.0% | |
| TAACTTTCGAACCTTTCACA+TGG | - | chr3.1:35288232-35288251 | MS.gene84237:intron | 35.0% | |
| TCCAAGAAATAATGAGGTAG+AGG | - | chr3.1:35288761-35288780 | MS.gene84237:intron | 35.0% | |
| TGTTTGGTTGACATCATGTT+TGG | - | chr3.1:35288509-35288528 | MS.gene84237:intron | 35.0% | |
| TTAGTTAATCGTCAAGCAAC+AGG | + | chr3.1:35290230-35290249 | None:intergenic | 35.0% | |
| TTGATCTCAGTTTCCTTAGT+TGG | + | chr3.1:35289168-35289187 | None:intergenic | 35.0% | |
| ! | AAAACCAAATACCTTTTGGG+GGG | + | chr3.1:35289458-35289477 | None:intergenic | 35.0% |
| ! | ACAACATTGATATTGGTGCT+TGG | - | chr3.1:35288850-35288869 | MS.gene84237:intron | 35.0% |
| ! | ACCTCTACCTCATTATTTCT+TGG | + | chr3.1:35288765-35288784 | None:intergenic | 35.0% |
| ! | ATACCTCGTGTTTCTCATTT+TGG | + | chr3.1:35288085-35288104 | None:intergenic | 35.0% |
| ! | CAAAACCAAATACCTTTTGG+GGG | + | chr3.1:35289459-35289478 | None:intergenic | 35.0% |
| ! | CAAATATGGGCTGTTAGTAA+TGG | + | chr3.1:35288597-35288616 | None:intergenic | 35.0% |
| ! | CAACATTGATATTGGTGCTT+GGG | - | chr3.1:35288851-35288870 | MS.gene84237:intron | 35.0% |
| ! | GATCAAAGTCGTTGATTACT+TGG | - | chr3.1:35289182-35289201 | MS.gene84237:intron | 35.0% |
| ! | TCGTGTTTTGCTAAGGAATA+TGG | - | chr3.1:35290591-35290610 | MS.gene84237:CDS | 35.0% |
| ! | TTGATTACTTGGGATTTGCT+TGG | - | chr3.1:35289193-35289212 | MS.gene84237:intron | 35.0% |
| !! | CAATTGATAGTGGTTAGGAT+AGG | + | chr3.1:35290190-35290209 | None:intergenic | 35.0% |
| !! | TTTCTGCAACTTTGGTGTTT+AGG | - | chr3.1:35287764-35287783 | MS.gene84237:intron | 35.0% |
| !!! | TCATCAGAACTGCCTTATTT+TGG | - | chr3.1:35290250-35290269 | MS.gene84237:intron | 35.0% |
| AAAATGGCAAGGTGTACTTC+AGG | - | chr3.1:35290686-35290705 | MS.gene84237:intron | 40.0% | |
| AAACTAACGGCGACAATAGA+AGG | + | chr3.1:35288122-35288141 | None:intergenic | 40.0% | |
| AAATGGCAAGGTGTACTTCA+GGG | - | chr3.1:35290687-35290706 | MS.gene84237:intron | 40.0% | |
| ACCTCGAACATGTTCTTGTT+AGG | + | chr3.1:35290652-35290671 | None:intergenic | 40.0% | |
| ACTGCATCTGATGTTAACTC+TGG | - | chr3.1:35289013-35289032 | MS.gene84237:intron | 40.0% | |
| AGAACAAAGTTGTCTACCTG+AGG | - | chr3.1:35289349-35289368 | MS.gene84237:CDS | 40.0% | |
| AGAGCCAAGAATGAACACTT+TGG | - | chr3.1:35287495-35287514 | MS.gene84237:CDS | 40.0% | |
| ATTCGTATTGTCATCGTCTC+AGG | - | chr3.1:35289530-35289549 | MS.gene84237:CDS | 40.0% | |
| CAAAATCCTAACCAAGGCAA+AGG | + | chr3.1:35289132-35289151 | None:intergenic | 40.0% | |
| CAAGAACATGTTCGAGGTTA+AGG | - | chr3.1:35290654-35290673 | MS.gene84237:intron | 40.0% | |
| CAAGATACACAAAGTCGACT+CGG | - | chr3.1:35289856-35289875 | MS.gene84237:intron | 40.0% | |
| CAGTTGCAGAAAGAGATTCT+CGG | + | chr3.1:35287667-35287686 | None:intergenic | 40.0% | |
| CATAAAAGACAGATCAGGAG+TGG | - | chr3.1:35290782-35290801 | MS.gene84237:intron | 40.0% | |
| CCTTTATGAATGCACTGCAA+AGG | + | chr3.1:35291278-35291297 | None:intergenic | 40.0% | |
| CCTTTGCAGTGCATTCATAA+AGG | - | chr3.1:35291275-35291294 | MS.gene84237:CDS | 40.0% | |
| CGACCTGTGTTTAAGAGAAT+AGG | + | chr3.1:35291010-35291029 | None:intergenic | 40.0% | |
| CTCTGACAAAATCCTAACCA+AGG | + | chr3.1:35289138-35289157 | None:intergenic | 40.0% | |
| CTGGTAGAAAACACGAAATG+TGG | + | chr3.1:35287477-35287496 | None:intergenic | 40.0% | |
| GAGCCAAGAATGAACACTTT+GGG | - | chr3.1:35287496-35287515 | MS.gene84237:CDS | 40.0% | |
| GGTGCGATATGTTTGATGAA+AGG | - | chr3.1:35287555-35287574 | MS.gene84237:CDS | 40.0% | |
| GTCACCGAAAATACAAGGAA+TGG | - | chr3.1:35291230-35291249 | MS.gene84237:CDS | 40.0% | |
| GTTTGTTTATTTGCCACTGC+AGG | - | chr3.1:35289106-35289125 | MS.gene84237:intron | 40.0% | |
| TATGTCGTACTCCATGTGAA+AGG | + | chr3.1:35288246-35288265 | None:intergenic | 40.0% | |
| TATTGTCATCGTCTCAGGAA+CGG | - | chr3.1:35289535-35289554 | MS.gene84237:CDS | 40.0% | |
| TCAGTGACAAAGTAAGTAGC+AGG | + | chr3.1:35288643-35288662 | None:intergenic | 40.0% | |
| TCCTAACAAGAACATGTTCG+AGG | - | chr3.1:35290648-35290667 | MS.gene84237:intron | 40.0% | |
| TGTCGAGGCAGAAAATGAAT+TGG | - | chr3.1:35289233-35289252 | MS.gene84237:CDS | 40.0% | |
| TTCTTCAAGAATGGGTGGTT+TGG | - | chr3.1:35288813-35288832 | MS.gene84237:intron | 40.0% | |
| TTCTTCACAAGTGTCAACCA+GGG | - | chr3.1:35289718-35289737 | MS.gene84237:intron | 40.0% | |
| TTGCTGTCACCGAAAATACA+AGG | - | chr3.1:35291225-35291244 | MS.gene84237:intron | 40.0% | |
| TTTCTTCACAAGTGTCAACC+AGG | - | chr3.1:35289717-35289736 | MS.gene84237:intron | 40.0% | |
| ! | AAAGTGTTCATTCTTGGCTC+TGG | + | chr3.1:35287496-35287515 | None:intergenic | 40.0% |
| ! | ATTATTGGAGGAGTGCAATC+AGG | + | chr3.1:35288923-35288942 | None:intergenic | 40.0% |
| ! | ATTGCTGTCGTGTTTTGCTA+AGG | - | chr3.1:35290584-35290603 | MS.gene84237:CDS | 40.0% |
| ! | CACTCCTGATCTGTCTTTTA+TGG | + | chr3.1:35290784-35290803 | None:intergenic | 40.0% |
| ! | GAAATGTGGTTGATGTCTTG+TGG | + | chr3.1:35287463-35287482 | None:intergenic | 40.0% |
| ! | GAATTGGTGTTCAAAATCGG+AGG | - | chr3.1:35289249-35289268 | MS.gene84237:intron | 40.0% |
| ! | GTTCCCAAAGTGTTCATTCT+TGG | + | chr3.1:35287502-35287521 | None:intergenic | 40.0% |
| ! | TGATTTAAGGCATGTGTACC+AGG | - | chr3.1:35291322-35291341 | MS.gene84237:intron | 40.0% |
| ! | TTATTGGAGGAGTGCAATCA+GGG | + | chr3.1:35288922-35288941 | None:intergenic | 40.0% |
| !! | TTGCTTGGAAGTGCTCATTT+CGG | - | chr3.1:35289208-35289227 | MS.gene84237:intron | 40.0% |
| !! | TTTAATTGGCCTTGGTGCAT+GGG | - | chr3.1:35290719-35290738 | MS.gene84237:intron | 40.0% |
| !!! | ACACCTTGCCATTTTTCTTG+TGG | + | chr3.1:35290681-35290700 | None:intergenic | 40.0% |
| !!! | TTTGGTTTTGGAAAGGAGTG+TGG | - | chr3.1:35288708-35288727 | MS.gene84237:intron | 40.0% |
| ACTGGACTCTCTTCCTAACT+GGG | + | chr3.1:35291370-35291389 | None:intergenic | 45.0% | |
| AGTTAGGAAGAGAGTCCAGT+GGG | - | chr3.1:35291370-35291389 | MS.gene84237:intron | 45.0% | |
| ATTATGTCCTGGTGCTTGCA+GGG | + | chr3.1:35289387-35289406 | None:intergenic | 45.0% | |
| CAGGGAGGATAGGGTTTAAT+TGG | - | chr3.1:35290705-35290724 | MS.gene84237:intron | 45.0% | |
| CCTCTCATGTCAACAGTTCA+AGG | - | chr3.1:35288164-35288183 | MS.gene84237:CDS | 45.0% | |
| CCTTGAACTGTTGACATGAG+AGG | + | chr3.1:35288167-35288186 | None:intergenic | 45.0% | |
| CTTAAACACAGGTCGTGTCT+TGG | - | chr3.1:35291015-35291034 | MS.gene84237:intron | 45.0% | |
| GCGAGAAGTAATGGTTAACC+TGG | + | chr3.1:35291343-35291362 | None:intergenic | 45.0% | |
| GGTCCACAAGAAAAATGGCA+AGG | - | chr3.1:35290675-35290694 | MS.gene84237:intron | 45.0% | |
| TCAACAGTTCAAGGCAATGC+TGG | - | chr3.1:35288173-35288192 | MS.gene84237:CDS | 45.0% | |
| TCAGAGTGCATTGCCAACTA+AGG | - | chr3.1:35289152-35289171 | MS.gene84237:intron | 45.0% | |
| TCATGGTACAAGAGGCGATT+AGG | - | chr3.1:35290344-35290363 | MS.gene84237:intron | 45.0% | |
| TCTATAAGTAACAGTCCCCC+TGG | + | chr3.1:35289738-35289757 | None:intergenic | 45.0% | |
| TCTTCACAAGTGTCAACCAG+GGG | - | chr3.1:35289719-35289738 | MS.gene84237:intron | 45.0% | |
| TGCATCATGCTGCCATCATT+TGG | + | chr3.1:35290858-35290877 | None:intergenic | 45.0% | |
| TGGTGTTCAAAATCGGAGGT+GGG | - | chr3.1:35289253-35289272 | MS.gene84237:intron | 45.0% | |
| TTTGAAGGATTGGAGGTGAC+TGG | - | chr3.1:35291153-35291172 | MS.gene84237:intron | 45.0% | |
| ! | ACAGTACTGGACACACTAGA+TGG | - | chr3.1:35289765-35289784 | MS.gene84237:intron | 45.0% |
| ! | GGATAGGGTTTAATTGGCCT+TGG | - | chr3.1:35290711-35290730 | MS.gene84237:intron | 45.0% |
| ! | TTGGTGTTCAAAATCGGAGG+TGG | - | chr3.1:35289252-35289271 | MS.gene84237:intron | 45.0% |
| !! | ACATCTTCTGACATCGACTC+TGG | - | chr3.1:35290906-35290925 | MS.gene84237:intron | 45.0% |
| !! | GTGCGTTACAGCTAGCTTTA+GGG | + | chr3.1:35289322-35289341 | None:intergenic | 45.0% |
| !! | GTTTAATTGGCCTTGGTGCA+TGG | - | chr3.1:35290718-35290737 | MS.gene84237:intron | 45.0% |
| !! | TGCGTTACAGCTAGCTTTAG+GGG | + | chr3.1:35289321-35289340 | None:intergenic | 45.0% |
| !! | TTACAGCTAGCTTTAGGGGA+TGG | + | chr3.1:35289317-35289336 | None:intergenic | 45.0% |
| AAAGCTAGCTGTAACGCACG+AGG | - | chr3.1:35289323-35289342 | MS.gene84237:intron | 50.0% | |
| ACACAGGTCGTGTCTTGGTT+TGG | - | chr3.1:35291020-35291039 | MS.gene84237:intron | 50.0% | |
| ACAGTTCAAGGCAATGCTGG+TGG | - | chr3.1:35288176-35288195 | MS.gene84237:CDS | 50.0% | |
| AGACAGATCAGGAGTGGAAG+TGG | - | chr3.1:35290788-35290807 | MS.gene84237:intron | 50.0% | |
| AGGTGTACTTCAGGGAGGAT+AGG | - | chr3.1:35290695-35290714 | MS.gene84237:intron | 50.0% | |
| AGTTCAAGGCAATGCTGGTG+GGG | - | chr3.1:35288178-35288197 | MS.gene84237:CDS | 50.0% | |
| AGTTTGCCTAGATGCTGCTG+AGG | - | chr3.1:35289425-35289444 | MS.gene84237:CDS | 50.0% | |
| ATATCGCACCAGCAGCTTCA+CGG | + | chr3.1:35287545-35287564 | None:intergenic | 50.0% | |
| CACTGGACTCTCTTCCTAAC+TGG | + | chr3.1:35291371-35291390 | None:intergenic | 50.0% | |
| CAGTTAGGAAGAGAGTCCAG+TGG | - | chr3.1:35291369-35291388 | MS.gene84237:intron | 50.0% | |
| CAGTTCAAGGCAATGCTGGT+GGG | - | chr3.1:35288177-35288196 | MS.gene84237:CDS | 50.0% | |
| CCAGGACATAATCAAGCCCA+TGG | - | chr3.1:35289395-35289414 | MS.gene84237:CDS | 50.0% | |
| CCATGGGCTTGATTATGTCC+TGG | + | chr3.1:35289398-35289417 | None:intergenic | 50.0% | |
| CTTATGTGCAGCGCGTAACT+TGG | - | chr3.1:35291181-35291200 | MS.gene84237:intron | 50.0% | |
| CTTCACAAGTGTCAACCAGG+GGG | - | chr3.1:35289720-35289739 | MS.gene84237:intron | 50.0% | |
| GATCTCAAGCTCCACGTAGT+AGG | + | chr3.1:35289612-35289631 | None:intergenic | 50.0% | |
| GATTATGTCCTGGTGCTTGC+AGG | + | chr3.1:35289388-35289407 | None:intergenic | 50.0% | |
| GGTGTACTTCAGGGAGGATA+GGG | - | chr3.1:35290696-35290715 | MS.gene84237:intron | 50.0% | |
| GTGCTCATTTCGGATTGTCG+AGG | - | chr3.1:35289218-35289237 | MS.gene84237:CDS | 50.0% | |
| GTTCAAAATCGGAGGTGGGT+GGG | - | chr3.1:35289257-35289276 | MS.gene84237:intron | 50.0% | |
| TAATGCTGACCCATGCACCA+AGG | + | chr3.1:35290731-35290750 | None:intergenic | 50.0% | |
| TGTTCAAAATCGGAGGTGGG+TGG | - | chr3.1:35289256-35289275 | MS.gene84237:intron | 50.0% | |
| TTCAAAATCGGAGGTGGGTG+GGG | - | chr3.1:35289258-35289277 | MS.gene84237:intron | 50.0% | |
| !! | CAGAGGCGTTAGGAAGGATT+TGG | - | chr3.1:35288208-35288227 | MS.gene84237:intron | 50.0% |
| !! | CGTGCGTTACAGCTAGCTTT+AGG | + | chr3.1:35289323-35289342 | None:intergenic | 50.0% |
| !! | GAATGGGTGGTTTGGCTTGA+AGG | - | chr3.1:35288821-35288840 | MS.gene84237:intron | 50.0% |
| !! | GATTGACAGAGGCGTTAGGA+AGG | - | chr3.1:35288202-35288221 | MS.gene84237:intron | 50.0% |
| !! | GGTTCCCCCCAAAAGGTATT+TGG | - | chr3.1:35289451-35289470 | MS.gene84237:CDS | 50.0% |
| !! | GTCTTGGTTTGGTTTCTGCG+AGG | - | chr3.1:35291031-35291050 | MS.gene84237:intron | 50.0% |
| ACTTCTCGCAGTGCCCAGTT+AGG | - | chr3.1:35291354-35291373 | MS.gene84237:intron | 55.0% | |
| AGGGAATAGGGACATGCCTC+AGG | + | chr3.1:35289368-35289387 | None:intergenic | 55.0% | |
| CCTGGTGCTTGCAGGGAATA+GGG | + | chr3.1:35289380-35289399 | None:intergenic | 55.0% | |
| GATCTCTTTGCAAGGCGCGT+AGG | - | chr3.1:35289280-35289299 | MS.gene84237:intron | 55.0% | |
| GCAGCGCGTAACTTGGTCAA+AGG | - | chr3.1:35291188-35291207 | MS.gene84237:intron | 55.0% | |
| TCCTGGTGCTTGCAGGGAAT+AGG | + | chr3.1:35289381-35289400 | None:intergenic | 55.0% | |
| TGCAGGCCTTTGCCTTGGTT+AGG | - | chr3.1:35289123-35289142 | MS.gene84237:intron | 55.0% | |
| TGGCAAGGTGTACTTCAGGG+AGG | - | chr3.1:35290690-35290709 | MS.gene84237:intron | 55.0% | |
| TGGGTGGGGATCTCTTTGCA+AGG | - | chr3.1:35289272-35289291 | MS.gene84237:intron | 55.0% | |
| ! | CTGGGCACTGCGAGAAGTAA+TGG | + | chr3.1:35291352-35291371 | None:intergenic | 55.0% |
| !! | GGGAGATTGACAGAGGCGTT+AGG | - | chr3.1:35288198-35288217 | MS.gene84237:intron | 55.0% |
| ACCAAGGCAAAGGCCTGCAG+TGG | + | chr3.1:35289122-35289141 | None:intergenic | 60.0% | |
| ACCCTGCCTCAGCAGCATCT+AGG | + | chr3.1:35289434-35289453 | None:intergenic | 60.0% | |
| CCCTATTCCCTGCAAGCACC+AGG | - | chr3.1:35289377-35289396 | MS.gene84237:CDS | 60.0% | |
| GCCTAGATGCTGCTGAGGCA+GGG | - | chr3.1:35289430-35289449 | MS.gene84237:CDS | 60.0% | |
| GCTGGTGGGGAGATTGACAG+AGG | - | chr3.1:35288191-35288210 | MS.gene84237:intron | 60.0% | |
| GTCAAGGACCGTGAAGCTGC+TGG | - | chr3.1:35287534-35287553 | MS.gene84237:CDS | 60.0% | |
| TGCCTAGATGCTGCTGAGGC+AGG | - | chr3.1:35289429-35289448 | MS.gene84237:CDS | 60.0% | |
| GAGGCAGGGTTCCCCCCAAA+AGG | - | chr3.1:35289444-35289463 | MS.gene84237:CDS | 65.0% | |
| GCCACTGCAGGCCTTTGCCT+TGG | - | chr3.1:35289118-35289137 | MS.gene84237:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 35287402 | 35291403 | 35287402 | ID=MS.gene84237 |
| chr3.1 | mRNA | 35287402 | 35291403 | 35287402 | ID=MS.gene84237.t1;Parent=MS.gene84237 |
| chr3.1 | exon | 35291399 | 35291403 | 35291399 | ID=MS.gene84237.t1.exon1;Parent=MS.gene84237.t1 |
| chr3.1 | CDS | 35291399 | 35291403 | 35291399 | ID=cds.MS.gene84237.t1;Parent=MS.gene84237.t1 |
| chr3.1 | exon | 35291229 | 35291308 | 35291229 | ID=MS.gene84237.t1.exon2;Parent=MS.gene84237.t1 |
| chr3.1 | CDS | 35291229 | 35291308 | 35291229 | ID=cds.MS.gene84237.t1;Parent=MS.gene84237.t1 |
| chr3.1 | exon | 35290534 | 35290625 | 35290534 | ID=MS.gene84237.t1.exon3;Parent=MS.gene84237.t1 |
| chr3.1 | CDS | 35290534 | 35290625 | 35290534 | ID=cds.MS.gene84237.t1;Parent=MS.gene84237.t1 |
| chr3.1 | exon | 35289908 | 35290082 | 35289908 | ID=MS.gene84237.t1.exon4;Parent=MS.gene84237.t1 |
| chr3.1 | CDS | 35289908 | 35290082 | 35289908 | ID=cds.MS.gene84237.t1;Parent=MS.gene84237.t1 |
| chr3.1 | exon | 35289340 | 35289660 | 35289340 | ID=MS.gene84237.t1.exon5;Parent=MS.gene84237.t1 |
| chr3.1 | CDS | 35289340 | 35289660 | 35289340 | ID=cds.MS.gene84237.t1;Parent=MS.gene84237.t1 |
| chr3.1 | exon | 35289211 | 35289253 | 35289211 | ID=MS.gene84237.t1.exon6;Parent=MS.gene84237.t1 |
| chr3.1 | CDS | 35289211 | 35289253 | 35289211 | ID=cds.MS.gene84237.t1;Parent=MS.gene84237.t1 |
| chr3.1 | exon | 35288107 | 35288199 | 35288107 | ID=MS.gene84237.t1.exon7;Parent=MS.gene84237.t1 |
| chr3.1 | CDS | 35288107 | 35288199 | 35288107 | ID=cds.MS.gene84237.t1;Parent=MS.gene84237.t1 |
| chr3.1 | exon | 35287841 | 35288011 | 35287841 | ID=MS.gene84237.t1.exon8;Parent=MS.gene84237.t1 |
| chr3.1 | CDS | 35287841 | 35288011 | 35287841 | ID=cds.MS.gene84237.t1;Parent=MS.gene84237.t1 |
| chr3.1 | exon | 35287735 | 35287779 | 35287735 | ID=MS.gene84237.t1.exon9;Parent=MS.gene84237.t1 |
| chr3.1 | CDS | 35287735 | 35287779 | 35287735 | ID=cds.MS.gene84237.t1;Parent=MS.gene84237.t1 |
| chr3.1 | exon | 35287402 | 35287645 | 35287402 | ID=MS.gene84237.t1.exon10;Parent=MS.gene84237.t1 |
| chr3.1 | CDS | 35287402 | 35287645 | 35287402 | ID=cds.MS.gene84237.t1;Parent=MS.gene84237.t1 |
| Gene Sequence |
| Protein sequence |
