AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene85051

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85051.t1 MTR_4g036415 98.435 767 8 1 1 763 1 767 0.0 1519
MS.gene85051.t1 MTR_2g005590 47.154 123 59 2 213 329 162 284 2.09e-26 110
MS.gene85051.t1 MTR_7g074100 46.341 123 60 3 213 329 136 258 6.47e-26 108
MS.gene85051.t1 MTR_8g005550 44.776 134 67 4 202 329 121 253 9.63e-26 108
MS.gene85051.t1 MTR_8g006580 44.776 134 67 4 202 329 121 253 9.63e-26 108
MS.gene85051.t1 MTR_8g006605 44.776 134 67 4 202 329 121 253 9.63e-26 108
MS.gene85051.t1 MTR_8g005430 44.361 133 68 3 202 329 121 252 1.72e-25 107
MS.gene85051.t1 MTR_2g005590 46.774 124 59 3 213 329 162 285 8.86e-25 106
MS.gene85051.t1 MTR_3g083770 30.973 226 119 6 91 304 68 268 1.67e-24 110
MS.gene85051.t1 MTR_3g010220 39.623 159 85 5 180 329 113 269 2.13e-24 104
MS.gene85051.t1 MTR_3g083770 30.973 226 118 6 91 304 68 267 2.52e-24 109
MS.gene85051.t1 MTR_5g075710 44.800 125 59 4 213 329 135 257 3.32e-24 103
MS.gene85051.t1 MTR_5g075710 44.800 125 59 4 213 329 120 242 5.46e-24 102
MS.gene85051.t1 MTR_5g075710 43.902 123 63 2 213 329 98 220 3.02e-22 97.1
MS.gene85051.t1 MTR_3g075500 45.000 80 44 0 449 528 208 287 2.33e-14 74.7
MS.gene85051.t1 MTR_4g070080 45.946 74 40 0 450 523 9 82 4.10e-14 70.1
MS.gene85051.t1 MTR_4g081520 43.820 89 46 2 446 534 50 134 5.52e-14 70.1
MS.gene85051.t1 MTR_4g070080 45.946 74 40 0 450 523 9 82 9.22e-14 70.1
MS.gene85051.t1 MTR_3g062640 40.000 100 50 3 213 304 136 233 1.04e-13 72.0
MS.gene85051.t1 MTR_7g013740 36.782 87 55 0 442 528 35 121 2.12e-12 65.9
MS.gene85051.t1 MTR_4g070190 41.892 74 43 0 450 523 11 84 2.94e-12 65.9
MS.gene85051.t1 MTR_7g013730 34.091 88 58 0 442 529 35 122 3.99e-12 67.4
MS.gene85051.t1 MTR_4g104470 40.506 79 47 0 450 528 219 297 6.57e-12 67.8
MS.gene85051.t1 MTR_4g109540 35.366 82 53 0 447 528 42 123 6.94e-12 67.0
MS.gene85051.t1 MTR_1g045510 42.667 75 43 0 449 523 206 280 2.66e-11 65.5
MS.gene85051.t1 MTR_4g070140 43.243 74 42 0 450 523 11 84 3.58e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85051.t1 AT5G51300 66.298 813 203 18 2 763 12 804 0.0 942
MS.gene85051.t1 AT5G51300 66.298 813 203 18 2 763 12 804 0.0 942
MS.gene85051.t1 AT5G51300 66.298 813 203 18 2 763 12 804 0.0 942
MS.gene85051.t1 AT1G09660 46.565 131 62 3 207 329 142 272 5.06e-28 115
MS.gene85051.t1 AT1G09660 46.565 131 62 3 207 329 142 272 5.06e-28 115
MS.gene85051.t1 AT3G08620 44.361 133 67 3 202 328 83 214 6.19e-26 107
MS.gene85051.t1 AT3G08620 44.361 133 67 3 202 328 128 259 8.46e-26 108
MS.gene85051.t1 AT2G38610 43.704 135 69 3 202 330 129 262 3.53e-25 106
MS.gene85051.t1 AT2G38610 43.704 135 69 3 202 330 129 262 3.53e-25 106
MS.gene85051.t1 AT4G26480 44.715 123 62 3 213 329 78 200 6.01e-24 101
MS.gene85051.t1 AT4G26480 45.833 120 59 3 216 329 166 285 1.16e-23 102
MS.gene85051.t1 AT4G26480 45.833 120 59 3 216 329 166 285 1.16e-23 102
MS.gene85051.t1 AT5G56140 43.902 123 63 3 213 329 169 291 2.38e-23 102
MS.gene85051.t1 AT3G32940 29.767 215 102 7 97 304 55 227 1.35e-18 90.9
MS.gene85051.t1 AT1G09660 42.105 114 56 4 207 312 142 253 3.07e-16 80.1
MS.gene85051.t1 AT4G24770 45.570 79 43 0 449 527 246 324 8.02e-15 77.0
MS.gene85051.t1 AT4G24770 45.570 79 43 0 449 527 246 324 8.02e-15 77.0
MS.gene85051.t1 AT4G13860 41.026 78 46 0 447 524 3 80 3.42e-14 68.9
MS.gene85051.t1 AT3G23830 45.455 77 42 0 447 523 35 111 4.97e-13 67.4
MS.gene85051.t1 AT3G23830 45.455 77 42 0 447 523 35 111 4.97e-13 67.4
MS.gene85051.t1 AT4G13850 40.000 105 60 2 423 527 14 115 5.97e-13 67.0
MS.gene85051.t1 AT5G54580 42.466 73 42 0 446 518 55 127 6.01e-13 67.8
MS.gene85051.t1 AT1G18630 44.156 77 43 0 447 523 36 112 6.41e-13 67.8
MS.gene85051.t1 AT5G50250 44.000 75 42 0 449 523 209 283 1.01e-12 70.1
MS.gene85051.t1 AT4G39260 40.541 74 44 0 450 523 9 82 1.97e-12 64.3
MS.gene85051.t1 AT5G47320 43.210 81 46 0 447 527 31 111 3.08e-12 67.0
MS.gene85051.t1 AT4G13850 40.000 105 60 2 423 527 14 115 3.40e-12 65.1
MS.gene85051.t1 AT4G13850 40.000 105 60 2 423 527 14 115 4.20e-12 65.1
MS.gene85051.t1 AT4G13850 40.000 105 60 2 423 527 14 115 4.70e-12 65.1
MS.gene85051.t1 AT4G39260 40.541 74 44 0 450 523 9 82 4.81e-12 64.3
MS.gene85051.t1 AT1G03457 42.667 75 43 0 448 522 226 300 5.90e-12 68.2
MS.gene85051.t1 AT1G03457 38.679 106 57 1 417 522 317 414 9.61e-12 68.6
MS.gene85051.t1 AT5G61030 37.500 80 50 0 444 523 37 116 1.07e-11 67.0
MS.gene85051.t1 AT5G61030 37.500 80 50 0 444 523 37 116 1.07e-11 67.0
MS.gene85051.t1 AT1G03457 42.667 75 43 0 448 522 331 405 1.18e-11 68.2
MS.gene85051.t1 AT4G39260 40.541 74 44 0 450 523 9 82 1.30e-11 64.3
MS.gene85051.t1 AT2G21660 40.541 74 44 0 450 523 11 84 1.55e-11 63.5
MS.gene85051.t1 AT2G21660 40.541 74 44 0 450 523 11 84 2.23e-11 63.5
MS.gene85051.t1 AT2G37220 40.244 82 48 1 446 527 90 170 3.40e-11 65.5
MS.gene85051.t1 AT5G06210 36.634 101 56 2 447 540 34 133 5.31e-11 62.0

Find 287 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATTCAATGTTTGAATTTC+AGG 0.055676 4.2:+67555596 None:intergenic
ATCCAATTGTTTCAACAATT+TGG 0.151016 4.2:-67554579 MS.gene85051:CDS
TGAACCTATATATGATAATA+TGG 0.217428 4.2:-67555492 MS.gene85051:CDS
ATCTTTGTCGGTTCCGCTTC+GGG 0.224492 4.2:+67555808 None:intergenic
TGTTATGGCAAAAGTTATTA+AGG 0.246290 4.2:-67554550 MS.gene85051:CDS
CCAACATATCCTGCATCTTA+TGG 0.257559 4.2:-67553955 MS.gene85051:CDS
CCGTTCTGATCGTTTGAATC+TGG 0.269375 4.2:+67555722 None:intergenic
GCAATTGGTTCGGGCAGTTC+TGG 0.291106 4.2:-67554747 MS.gene85051:CDS
TGGTGCCGTTGATGCCGTTT+TGG 0.296938 4.2:+67555909 None:intergenic
AATTCAACTTCCTGATTTCA+TGG 0.302742 4.2:-67555636 MS.gene85051:CDS
GAATGAGGATTTGCATGTTT+TGG 0.305991 4.2:-67555147 MS.gene85051:CDS
TGTAGGTTGTGTGGTGAGCC+TGG 0.310565 4.2:-67554975 MS.gene85051:CDS
CAGAATTTCTTGGCTGAGTT+GGG 0.312746 4.2:-67554813 MS.gene85051:CDS
CGGCTTTGAATGGGACGATT+AGG 0.313005 4.2:-67555010 MS.gene85051:CDS
GGCTTTGAATGGGACGATTA+GGG 0.314504 4.2:-67555009 MS.gene85051:CDS
GATCTTTGTCGGTTCCGCTT+CGG 0.321344 4.2:+67555807 None:intergenic
TGGTGCTAAGATTGTGATTC+GGG 0.329516 4.2:-67555234 MS.gene85051:CDS
CCCATTGGGAGTGCTCCTCC+TGG 0.332877 4.2:-67554282 MS.gene85051:CDS
TCCGCCTGATTGATCTTTGT+CGG 0.336120 4.2:+67555796 None:intergenic
GGATTGTATGGAGGAGGAAT+AGG 0.337627 4.2:+67554225 None:intergenic
AAATCAGGAAGTTGAATTAC+CGG 0.338043 4.2:+67555641 None:intergenic
CACCAAATTGTTGAAACAAT+TGG 0.341079 4.2:+67554577 None:intergenic
CGGTTCATCATCAGCCCATC+TGG 0.345058 4.2:+67555667 None:intergenic
AGTACACCACAAGCTGGATT+AGG 0.345327 4.2:-67554684 MS.gene85051:CDS
AGGGGCTGGTGCGGTTAAAA+AGG 0.349731 4.2:-67554664 MS.gene85051:CDS
TAGTACTTTGGCAATTGGTT+CGG 0.349834 4.2:-67554757 MS.gene85051:CDS
CCTCCTTGGGCTAACAATAC+TGG 0.355353 4.2:-67554717 MS.gene85051:CDS
GTACACCACAAGCTGGATTA+GGG 0.357290 4.2:-67554683 MS.gene85051:CDS
GGAAGTTGAATTACCGGTTT+CGG 0.361177 4.2:+67555647 None:intergenic
TAAAGCTTCTTCTGAAGCTT+TGG 0.365077 4.2:+67555347 None:intergenic
GTAGTCTTAATCGCAGATTC+AGG 0.367160 4.2:+67554780 None:intergenic
ACAATTTGGTGAGATTGTTA+TGG 0.367806 4.2:-67554565 MS.gene85051:CDS
AGTGCTCCTCCTGGGAGTTA+TGG 0.379254 4.2:-67554273 MS.gene85051:CDS
AGGTGGGGCGGAATGATTAC+TGG 0.380221 4.2:+67553834 None:intergenic
GATTAAGACTACTAGTACTT+TGG 0.382369 4.2:-67554769 MS.gene85051:CDS
GGAGCTGCTGGTGGCATTGA+AGG 0.382420 4.2:+67553979 None:intergenic
AGTACTTTGGCAATTGGTTC+GGG 0.382758 4.2:-67554756 MS.gene85051:CDS
GTTCTGGAAGCAATCCTCCT+TGG 0.384094 4.2:-67554731 MS.gene85051:CDS
CAGCATTGCAAATGCGCCTT+GGG 0.384172 4.2:-67553857 MS.gene85051:CDS
GATGCGCTTGAGGCTGCGGC+TGG 0.389783 4.2:-67555107 MS.gene85051:CDS
TATATGATAATATGGGGATT+AGG 0.390370 4.2:-67555484 MS.gene85051:CDS
ACTACTAGTACTTTGGCAAT+TGG 0.391239 4.2:-67554762 MS.gene85051:CDS
GTTTGTAAGCATTGTGGGGA+TGG 0.395994 4.2:-67554900 MS.gene85051:CDS
TTGGGCTTATTATTGGGCCT+AGG 0.403109 4.2:-67555289 MS.gene85051:CDS
AGCATAAGAGGCAGCAACTT+AGG 0.403660 4.2:-67555040 MS.gene85051:CDS
CTCTCCGAAAACGGTTTAAC+CGG 0.404174 4.2:-67555839 MS.gene85051:CDS
ATTAGTAGAATGTTGCAATC+TGG 0.404950 4.2:-67555560 MS.gene85051:CDS
CCAATTGGCTGGCTTTGAAC+AGG 0.407319 4.2:+67554339 None:intergenic
CCACCCACTCTTGAGGATGA+TGG 0.408818 4.2:-67554606 MS.gene85051:CDS
AGGGAGCTCGCGGCTTTGAA+TGG 0.410116 4.2:-67555020 MS.gene85051:CDS
TGGTCTGAAGTAGGGGCAGG+AGG 0.410645 4.2:+67553886 None:intergenic
GCTGCATTTCACCAGAAGCC+GGG 0.411186 4.2:+67554082 None:intergenic
CCGCCACCGGGACGAAGAAA+AGG 0.411481 4.2:-67555694 MS.gene85051:CDS
TTCTGGAAGCAATCCTCCTT+GGG 0.414696 4.2:-67554730 MS.gene85051:CDS
GAACCTATATATGATAATAT+GGG 0.415791 4.2:-67555491 MS.gene85051:CDS
TGTCCGGTGAAGGGTGCTAC+TGG 0.415903 4.2:-67554858 MS.gene85051:CDS
GAGGCACATTTCCAATGCTC+TGG 0.415977 4.2:+67553788 None:intergenic
TCCGCTTCGGGTGTTGCCGC+CGG 0.416865 4.2:+67555820 None:intergenic
TCAATACCACCCATGAAATC+AGG 0.417840 4.2:+67555626 None:intergenic
ACTATTGCAGTAAGAGTTGC+TGG 0.418096 4.2:-67554420 MS.gene85051:CDS
GTCTGAAGTAGGGGCAGGAG+GGG 0.418816 4.2:+67553888 None:intergenic
GGTCAACCTATGCCTCCTTA+TGG 0.419163 4.2:-67554156 MS.gene85051:CDS
GGATTATCGTTGAGCGGTGG+TGG 0.420771 4.2:+67555947 None:intergenic
GAAGGAGATCTAGCCCCTTC+AGG 0.424049 4.2:+67555518 None:intergenic
CATTTGCAATGCTGTGTGAT+TGG 0.424259 4.2:+67553866 None:intergenic
TCCTCATTCTCCGACGGATC+AGG 0.430590 4.2:+67555161 None:intergenic
TATACCGATGAAAGAGTATC+CGG 0.432063 4.2:-67555324 MS.gene85051:CDS
TCTGTACCGACCAACATGTA+TGG 0.432097 4.2:-67554012 MS.gene85051:CDS
TCGGCGGAAAAGACGTCATA+TGG 0.435235 4.2:-67553742 MS.gene85051:CDS
TGATCGTTTGAATCTGGCTG+TGG 0.435288 4.2:+67555728 None:intergenic
TGGGCTTATTATTGGGCCTA+GGG 0.437365 4.2:-67555288 MS.gene85051:CDS
TATACCGGCGGTGGTCCCAT+TGG 0.439352 4.2:-67554297 MS.gene85051:CDS
GGCTGATGATGAACCGAAAC+CGG 0.440956 4.2:-67555660 MS.gene85051:CDS
ACAGCCGATGCAGGTGGTCC+TGG 0.441297 4.2:+67554372 None:intergenic
CTGGTGCTAAGATTGTGATT+CGG 0.442727 4.2:-67555235 MS.gene85051:CDS
AAGATTGTGATTCGGGGTAA+AGG 0.445533 4.2:-67555227 MS.gene85051:CDS
AGCTTCTTCTGAAGCTTTGG+TGG 0.445877 4.2:+67555350 None:intergenic
TTAGGGATGAAGAGTATTGT+AGG 0.446170 4.2:-67554992 MS.gene85051:CDS
GTTATTAAGGATCGAATGAC+AGG 0.447306 4.2:-67554537 MS.gene85051:CDS
ATGATACAAATCTGTACATT+GGG 0.449523 4.2:-67554635 MS.gene85051:CDS
ACAGCATTGCAAATGCGCCT+TGG 0.451912 4.2:-67553858 MS.gene85051:CDS
GCTATTGCAGCCTGTGGATG+AGG 0.452749 4.2:-67555072 MS.gene85051:CDS
TGCTGCATTTCACCAGAAGC+CGG 0.453965 4.2:+67554081 None:intergenic
AATCCACTTCTCTCCGAAAA+CGG 0.458472 4.2:-67555848 MS.gene85051:CDS
TGATGAGTATCAGAATTTCT+TGG 0.459979 4.2:-67554823 MS.gene85051:CDS
CCATTGGGAGTGCTCCTCCT+GGG 0.463144 4.2:-67554281 MS.gene85051:CDS
GGGAGCTCGCGGCTTTGAAT+GGG 0.463499 4.2:-67555019 MS.gene85051:CDS
ATACCGGCGGTGGTCCCATT+GGG 0.465286 4.2:-67554296 MS.gene85051:CDS
GGCTGATGCGCTTGAGGCTG+CGG 0.465364 4.2:-67555111 MS.gene85051:CDS
TGGAGGTACTCCTGTCCCAT+GGG 0.466274 4.2:-67554253 MS.gene85051:CDS
ACCTGATCCGTCGGAGAATG+AGG 0.468741 4.2:-67555162 MS.gene85051:CDS
AGGTTGTTTGTAAGCATTGT+GGG 0.470243 4.2:-67554905 MS.gene85051:CDS
ATCGTTGAGCGGTGGTGGAT+TGG 0.470298 4.2:+67555952 None:intergenic
GGTGGTCCTGGAGGTACAAC+AGG 0.470399 4.2:+67554384 None:intergenic
CTCAAGGCGATAGCCATTCA+TGG 0.472803 4.2:+67554449 None:intergenic
GCTTGAGGCTGCGGCTGGTA+TGG 0.473691 4.2:-67555102 MS.gene85051:CDS
GACCACCGCCGGTATATTGT+TGG 0.475580 4.2:+67554304 None:intergenic
TTCTGAGTATGAGAAATTCA+TGG 0.476992 4.2:-67553713 MS.gene85051:CDS
ACCACCGCCGGTATATTGTT+GGG 0.478566 4.2:+67554305 None:intergenic
GCATAAGGATTGTATGGAGG+AGG 0.478828 4.2:+67554219 None:intergenic
GGATATGTTGGTGGAGCTGC+TGG 0.481070 4.2:+67553967 None:intergenic
TGCAGCAGAATTACCCTCCT+GGG 0.481585 4.2:-67554065 MS.gene85051:CDS
GCATAAGAGGCAGCAACTTA+GGG 0.481868 4.2:-67555039 MS.gene85051:CDS
TGGACGTGAATCGTTGTTAT+CGG 0.482566 4.2:+67555880 None:intergenic
CCTCAGCCTGTTGTACCTCC+AGG 0.483014 4.2:-67554390 MS.gene85051:CDS
ATGAATGGCTATCGCCTTGA+GGG 0.484462 4.2:-67554447 MS.gene85051:CDS
GATACATAGTTGATCCAGGC+GGG 0.485027 4.2:+67554190 None:intergenic
TCAGAATTTCTTGGCTGAGT+TGG 0.489105 4.2:-67554814 MS.gene85051:CDS
AGATTGTGATTCGGGGTAAA+GGG 0.490400 4.2:-67555226 MS.gene85051:CDS
AAGAGGATGGAGAAGGAGAC+TGG 0.491145 4.2:-67555254 MS.gene85051:CDS
TCTGAAGTAGGGGCAGGAGG+GGG 0.491665 4.2:+67553889 None:intergenic
GGGGACCTGTAGGCATGGGT+GGG 0.492437 4.2:+67554124 None:intergenic
ATGGATAGGCACCAATTGGC+TGG 0.493844 4.2:+67554328 None:intergenic
TTATTATCAGACTGCACCCC+AGG 0.496388 4.2:+67554048 None:intergenic
ATCCCCATATTATCATATAT+AGG 0.497159 4.2:+67555488 None:intergenic
GAGAGAAGTGGATTTGGAAT+CGG 0.498073 4.2:+67555857 None:intergenic
AATGCAATTGTTGCCATGAA+TGG 0.498742 4.2:-67554462 MS.gene85051:CDS
CCTTTAGATGATCGTCCTGA+AGG 0.501343 4.2:-67555533 MS.gene85051:CDS
TCATCCTAGTATTGATTGTC+CGG 0.504611 4.2:-67554874 MS.gene85051:CDS
CAGGTTTGAGTAAAGGATAC+GGG 0.505016 4.2:-67554518 MS.gene85051:CDS
CCTGTTCAAAGCCAGCCAAT+TGG 0.505090 4.2:-67554339 MS.gene85051:CDS
CAATACCCACCCATGCCTAC+AGG 0.505551 4.2:-67554129 MS.gene85051:CDS
TGAATCGTTGTTATCGGTAG+TGG 0.505566 4.2:+67555886 None:intergenic
CTGGCTTTGAACAGGATAAG+TGG 0.506527 4.2:+67554347 None:intergenic
CCATAAGATGCAGGATATGT+TGG 0.508849 4.2:+67553955 None:intergenic
CTTTAGATGATCGTCCTGAA+GGG 0.510187 4.2:-67555532 MS.gene85051:CDS
GGAGGAGCATAAGGATTGTA+TGG 0.510415 4.2:+67554213 None:intergenic
TAGTATTGATTGTCCGGTGA+AGG 0.510881 4.2:-67554868 MS.gene85051:CDS
CTGCATTTCACCAGAAGCCG+GGG 0.512446 4.2:+67554083 None:intergenic
CTGTGTGATTGGTCTGAAGT+AGG 0.514366 4.2:+67553877 None:intergenic
GTGGGTCCCATCGGCTTCTA+CGG 0.516793 4.2:+67555747 None:intergenic
TCTGCAGACGAAGGAGGAGG+TGG 0.517016 4.2:+67553817 None:intergenic
GGAGGAATAGGAGGTCCCCA+TGG 0.517280 4.2:+67554237 None:intergenic
CGAATGACAGGTTTGAGTAA+AGG 0.518211 4.2:-67554525 MS.gene85051:CDS
CCAGGAGGAGCACTCCCAAT+GGG 0.520762 4.2:+67554282 None:intergenic
CAACTTCCTGATTTCATGGG+TGG 0.520799 4.2:-67555632 MS.gene85051:CDS
TTCCCAGTAGCACCCTTCAC+CGG 0.521265 4.2:+67554855 None:intergenic
ATAGGAGGTCCCCATGGGAC+AGG 0.522360 4.2:+67554243 None:intergenic
ATTCAACTTCCTGATTTCAT+GGG 0.522392 4.2:-67555635 MS.gene85051:CDS
GATGATACAAATCTGTACAT+TGG 0.522653 4.2:-67554636 MS.gene85051:CDS
TAAGTGGGCACAGCCGATGC+AGG 0.526356 4.2:+67554363 None:intergenic
GTATTTGCCACCCACTCTTG+AGG 0.527496 4.2:-67554613 MS.gene85051:CDS
GGTGGGTATTGAACACCATA+AGG 0.528437 4.2:+67554141 None:intergenic
TGGGATGGATAGGCACCAAT+TGG 0.528906 4.2:+67554324 None:intergenic
ATATTATCATATATAGGTTC+AGG 0.529213 4.2:+67555494 None:intergenic
ACAGGTTTGAGTAAAGGATA+CGG 0.530195 4.2:-67554519 MS.gene85051:CDS
ATGCAGCAGAATTACCCTCC+TGG 0.530640 4.2:-67554066 MS.gene85051:CDS
TCCGCCGATGAGTTAGGAGG+AGG 0.531623 4.2:+67553757 None:intergenic
GGTCTGAAGTAGGGGCAGGA+GGG 0.532121 4.2:+67553887 None:intergenic
GGTAAAGGGTCGGTGAAAGA+AGG 0.532993 4.2:-67555212 MS.gene85051:CDS
ATGGAGGTACTCCTGTCCCA+TGG 0.534335 4.2:-67554254 MS.gene85051:CDS
CACGCATACTGACGATGCCC+AGG 0.535897 4.2:+67554957 None:intergenic
GCAGATCAATCCCAGAGCAT+TGG 0.537143 4.2:-67553799 MS.gene85051:CDS
GAGTTAGGAGGAGGCATAGG+TGG 0.538669 4.2:+67553766 None:intergenic
GGAACCGACAAAGATCAATC+AGG 0.538815 4.2:-67555800 MS.gene85051:CDS
AATTTCTTGGCTGAGTTGGG+TGG 0.540197 4.2:-67554810 MS.gene85051:CDS
AGGCACATTTCCAATGCTCT+GGG 0.542648 4.2:+67553789 None:intergenic
GTAGGTTGTGTGGTGAGCCT+GGG 0.545604 4.2:-67554974 MS.gene85051:CDS
GTCCGGTGAAGGGTGCTACT+GGG 0.545922 4.2:-67554857 MS.gene85051:CDS
GATCGTTTGAATCTGGCTGT+GGG 0.548883 4.2:+67555729 None:intergenic
GGTATATTGTTGGGATGGAT+AGG 0.549190 4.2:+67554314 None:intergenic
GGAGGATACATAGTTGATCC+AGG 0.549406 4.2:+67554186 None:intergenic
CAGAACGGTGAAGCCGCCAC+CGG 0.550390 4.2:-67555707 MS.gene85051:CDS
CTGCAGACGAAGGAGGAGGT+GGG 0.550760 4.2:+67553818 None:intergenic
TCAGCAGGTGGCTTAAAAGC+AGG 0.550868 4.2:+67555380 None:intergenic
GGAGGATATCCATAAGATGC+AGG 0.551040 4.2:+67553946 None:intergenic
AGGTAGGTTGCAACAGAAGA+GGG 0.552516 4.2:-67555192 MS.gene85051:CDS
CTGTACCGACCAACATGTAT+GGG 0.553362 4.2:-67554011 MS.gene85051:CDS
CCTTCAGGACGATCATCTAA+AGG 0.555385 4.2:+67555533 None:intergenic
TGCAGACGAAGGAGGAGGTG+GGG 0.556279 4.2:+67553819 None:intergenic
ATTGGAATCGAGAGCCTCCA+TGG 0.556663 4.2:+67555970 None:intergenic
TGAGGCTGCGGCTGGTATGG+TGG 0.557666 4.2:-67555099 MS.gene85051:CDS
TTCACCGGACAATCAATACT+AGG 0.560422 4.2:+67554870 None:intergenic
GGAGGAACTGCATTGTAGTA+AGG 0.560460 4.2:+67553919 None:intergenic
GCTCCTCCTGGGAGTTATGG+AGG 0.560516 4.2:-67554270 MS.gene85051:CDS
TGAACACCATAAGGAGGCAT+AGG 0.560821 4.2:+67554150 None:intergenic
GGGTGCTACTGGGAAGAAGA+TGG 0.562289 4.2:-67554847 MS.gene85051:CDS
CATGAATGGCTATCGCCTTG+AGG 0.563895 4.2:-67554448 MS.gene85051:CDS
TTTGGTGGTCTATAATCAGC+AGG 0.566022 4.2:+67555365 None:intergenic
CTGCAATAGTTCGACCCTCA+AGG 0.566323 4.2:+67554433 None:intergenic
TGTGTGATTGGTCTGAAGTA+GGG 0.566402 4.2:+67553878 None:intergenic
AATCTGGCTGTGGGTCCCAT+CGG 0.566587 4.2:+67555738 None:intergenic
CCGCCGGTATATTGTTGGGA+TGG 0.568816 4.2:+67554309 None:intergenic
GTGGGCACAGCCGATGCAGG+TGG 0.568904 4.2:+67554366 None:intergenic
AGAAGTGGATTTGGAATCGG+TGG 0.569201 4.2:+67555860 None:intergenic
TATCCATCCCAACAATATAC+CGG 0.570762 4.2:-67554312 MS.gene85051:CDS
TTAGGAGGAGGCATAGGTGG+AGG 0.571215 4.2:+67553769 None:intergenic
TACATAGTTGATCCAGGCGG+GGG 0.571433 4.2:+67554192 None:intergenic
AGCCCAATAAAATTATAGCC+CGG 0.571651 4.2:+67555305 None:intergenic
AGCTGGATTAGGGGCTGGTG+CGG 0.572157 4.2:-67554673 MS.gene85051:CDS
CCACAAGCTGGATTAGGGGC+TGG 0.572511 4.2:-67554678 MS.gene85051:CDS
GCTAACAATACTGGTTCAGC+TGG 0.572758 4.2:-67554708 MS.gene85051:CDS
ATTCCCCAAAACGGCATCAA+CGG 0.574006 4.2:-67555914 MS.gene85051:CDS
TACTCAGAAGAGGATGGAGA+AGG 0.574391 4.2:-67555261 MS.gene85051:CDS
TGATCTGCAGACGAAGGAGG+AGG 0.574758 4.2:+67553814 None:intergenic
GGCTTATTATTGGGCCTAGG+GGG 0.577049 4.2:-67555286 MS.gene85051:CDS
TAAGATGCAGGATATGTTGG+TGG 0.577189 4.2:+67553958 None:intergenic
GATTGGTCTGAAGTAGGGGC+AGG 0.578662 4.2:+67553883 None:intergenic
AAGGGTCGGTGAAAGAAGGT+AGG 0.578669 4.2:-67555208 MS.gene85051:CDS
CCAGCCCCTAATCCAGCTTG+TGG 0.579159 4.2:+67554678 None:intergenic
GGGGAATACTCAGAAGAGGA+TGG 0.579237 4.2:-67555267 MS.gene85051:CDS
TCATTCAAAACCTCATCCAC+AGG 0.579571 4.2:+67555062 None:intergenic
CCCAGGAGGAGCACTCCCAA+TGG 0.580485 4.2:+67554281 None:intergenic
AGTATTGATTGTCCGGTGAA+GGG 0.580602 4.2:-67554867 MS.gene85051:CDS
GCGGAATGATTACTGGCCCA+AGG 0.581270 4.2:+67553841 None:intergenic
TCCCAACAATATACCGGCGG+TGG 0.583169 4.2:-67554306 MS.gene85051:CDS
GGTCCCATCGGCTTCTACGG+CGG 0.585233 4.2:+67555750 None:intergenic
GGAGGTACAACAGGCTGAGG+AGG 0.586166 4.2:+67554393 None:intergenic
AGACGAAGGAGGAGGTGGGG+CGG 0.587962 4.2:+67553822 None:intergenic
GCTGGTAGTACACCACAAGC+TGG 0.588576 4.2:-67554690 MS.gene85051:CDS
GCATTGTAGTAAGGTGGAGG+AGG 0.589041 4.2:+67553928 None:intergenic
CGAAGAAAAGGAAATCCAGA+TGG 0.589301 4.2:-67555682 MS.gene85051:CDS
GAGGTTGTTTGTAAGCATTG+TGG 0.589881 4.2:-67554906 MS.gene85051:CDS
TGTAAGCATTGTGGGGATGG+TGG 0.589931 4.2:-67554897 MS.gene85051:CDS
GGATACGGCTGATGCGCTTG+AGG 0.590654 4.2:-67555117 MS.gene85051:CDS
CAAACCATCATCCTCAAGAG+TGG 0.591247 4.2:+67554602 None:intergenic
AGAACGGTGAAGCCGCCACC+GGG 0.591472 4.2:-67555706 MS.gene85051:CDS
TAGCCCGGATACTCTTTCAT+CGG 0.591526 4.2:+67555320 None:intergenic
ATAGGTTGACCATGCATAGG+AGG 0.592649 4.2:+67554168 None:intergenic
CCTGGAGGTACAACAGGCTG+AGG 0.594819 4.2:+67554390 None:intergenic
AAGGTAGGTTGCAACAGAAG+AGG 0.594916 4.2:-67555193 MS.gene85051:CDS
GAGAGTATCGTGCTCGTGAG+AGG 0.595551 4.2:-67555451 MS.gene85051:CDS
ACTCCCAATGGGACCACCGC+CGG 0.597493 4.2:+67554293 None:intergenic
GAGGAATAGGAGGTCCCCAT+GGG 0.598071 4.2:+67554238 None:intergenic
TCATATATAGGTTCAGGTGA+AGG 0.598965 4.2:+67555500 None:intergenic
ACCGGCGGCAACACCCGAAG+CGG 0.599063 4.2:-67555821 MS.gene85051:CDS
GTGTGATTGGTCTGAAGTAG+GGG 0.599262 4.2:+67553879 None:intergenic
CATTGTGTTCCCATACATGT+TGG 0.599711 4.2:+67554002 None:intergenic
ACCTCCAGGACCACCTGCAT+CGG 0.601116 4.2:-67554376 MS.gene85051:CDS
GATGAGTTAGGAGGAGGCAT+AGG 0.601322 4.2:+67553763 None:intergenic
TGGCTTTGAACAGGATAAGT+GGG 0.601464 4.2:+67554348 None:intergenic
GGGCTTATTATTGGGCCTAG+GGG 0.601483 4.2:-67555287 MS.gene85051:CDS
TGGGATTGATCTGCAGACGA+AGG 0.602817 4.2:+67553808 None:intergenic
ACTGCATTGTAGTAAGGTGG+AGG 0.604855 4.2:+67553925 None:intergenic
AACGCCGCCGTAGAAGCCGA+TGG 0.605313 4.2:-67555754 MS.gene85051:CDS
GTGTTCCCATACATGTTGGT+CGG 0.605470 4.2:+67554006 None:intergenic
AACCTATATATGATAATATG+GGG 0.606432 4.2:-67555490 MS.gene85051:CDS
TTGTATGGAGGAGGAATAGG+AGG 0.606833 4.2:+67554228 None:intergenic
GATTGATCTGCAGACGAAGG+AGG 0.607157 4.2:+67553811 None:intergenic
GAAACCCTAATTCCCCAAAA+CGG 0.607359 4.2:-67555923 MS.gene85051:CDS
GACTTCGACGTTTAAGAGTG+AGG 0.609080 4.2:-67554925 MS.gene85051:CDS
ACTATGTATCCTCCTATGCA+TGG 0.613317 4.2:-67554177 MS.gene85051:CDS
GGAACTGCATTGTAGTAAGG+TGG 0.613934 4.2:+67553922 None:intergenic
ATACATAGTTGATCCAGGCG+GGG 0.618361 4.2:+67554191 None:intergenic
CCATCATCCTCAAGAGTGGG+TGG 0.619730 4.2:+67554606 None:intergenic
GGTGGTCTATAATCAGCAGG+TGG 0.619754 4.2:+67555368 None:intergenic
AAACCATCATCCTCAAGAGT+GGG 0.620492 4.2:+67554603 None:intergenic
GGTTGTTTGTAAGCATTGTG+GGG 0.621386 4.2:-67554904 MS.gene85051:CDS
GGATTTGAAACCTGATCCGT+CGG 0.621920 4.2:-67555171 MS.gene85051:CDS
TGCAAATCCTCATTCTCCGA+CGG 0.622653 4.2:+67555155 None:intergenic
GAAGAGTATTGTAGGTTGTG+TGG 0.624175 4.2:-67554984 MS.gene85051:CDS
ACGCCGCCGTAGAAGCCGAT+GGG 0.628586 4.2:-67555753 MS.gene85051:CDS
GGAGTACCTCCATAACTCCC+AGG 0.630088 4.2:+67554264 None:intergenic
GCAGCAACTTAGGGAGCTCG+CGG 0.630126 4.2:-67555030 MS.gene85051:CDS
TTTAGATGATCGTCCTGAAG+GGG 0.630920 4.2:-67555531 MS.gene85051:CDS
TGTGATTCGGGGTAAAGGGT+CGG 0.632552 4.2:-67555222 MS.gene85051:CDS
TATGCCTCCTCCTAACTCAT+CGG 0.633008 4.2:-67553761 MS.gene85051:CDS
ATACCGATGAAAGAGTATCC+GGG 0.635656 4.2:-67555323 MS.gene85051:CDS
GGAGCATAAGGATTGTATGG+AGG 0.640513 4.2:+67554216 None:intergenic
GTCAGTATGCGTGTCCTACG+AGG 0.640855 4.2:-67554947 MS.gene85051:CDS
GGAGAAGCTATTGCAGCCTG+TGG 0.641988 4.2:-67555078 MS.gene85051:CDS
GAAGAAAAGGAAATCCAGAT+GGG 0.642143 4.2:-67555681 MS.gene85051:CDS
GAACCAGTATTGTTAGCCCA+AGG 0.643482 4.2:+67554714 None:intergenic
TACACCACAAGCTGGATTAG+GGG 0.643761 4.2:-67554682 MS.gene85051:CDS
ATCGTTGTTATCGGTAGTGG+TGG 0.644262 4.2:+67555889 None:intergenic
GCCTCCTCCTAACTCATCGG+CGG 0.644516 4.2:-67553758 MS.gene85051:CDS
TCCGAAAACGGTTTAACCGG+CGG 0.646554 4.2:-67555836 MS.gene85051:CDS
TATGTTGGTGGAGCTGCTGG+TGG 0.648824 4.2:+67553970 None:intergenic
TGCATTTCACCAGAAGCCGG+GGG 0.648939 4.2:+67554084 None:intergenic
GTTTCGGGATTATCGTTGAG+CGG 0.651830 4.2:+67555941 None:intergenic
TTATCAGACTGCACCCCAGG+AGG 0.652632 4.2:+67554051 None:intergenic
GGCATAGGTTGACCATGCAT+AGG 0.653836 4.2:+67554165 None:intergenic
TCGGGATTATCGTTGAGCGG+TGG 0.661410 4.2:+67555944 None:intergenic
CCAGTATTGTTAGCCCAAGG+AGG 0.662800 4.2:+67554717 None:intergenic
GCCGATGCAGGTGGTCCTGG+AGG 0.664010 4.2:+67554375 None:intergenic
TATCAGACTGCACCCCAGGA+GGG 0.665423 4.2:+67554052 None:intergenic
TTAAACGTCGAAGTCCTCGT+AGG 0.666107 4.2:+67554933 None:intergenic
GGAGGTACTCCTGTCCCATG+GGG 0.666907 4.2:-67554252 MS.gene85051:CDS
GCAGCAGAATTACCCTCCTG+GGG 0.683396 4.2:-67554064 MS.gene85051:CDS
GGGTATTGAACACCATAAGG+AGG 0.687098 4.2:+67554144 None:intergenic
ACCGACAAAGATCAATCAGG+CGG 0.691376 4.2:-67555797 MS.gene85051:CDS
CCAGATTCAAACGATCAGAA+CGG 0.693194 4.2:-67555722 MS.gene85051:CDS
CCATCCCAACAATATACCGG+CGG 0.713231 4.2:-67554309 MS.gene85051:CDS
GGTGCTAAGATTGTGATTCG+GGG 0.721073 4.2:-67555233 MS.gene85051:CDS
GTACCTCCATAACTCCCAGG+AGG 0.745055 4.2:+67554267 None:intergenic
GAAGTATGCTGATATCACAA+TGG 0.751667 4.2:-67554490 MS.gene85051:CDS
GGATACATAGTTGATCCAGG+CGG 0.770511 4.2:+67554189 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACCTATATATGATAATATG+GGG - chr4.2:67554177-67554196 MS.gene85051:CDS 20.0%
!! ATATTATCATATATAGGTTC+AGG + chr4.2:67554176-67554195 None:intergenic 20.0%
!! GAACCTATATATGATAATAT+GGG - chr4.2:67554176-67554195 MS.gene85051:CDS 20.0%
!! TGAACCTATATATGATAATA+TGG - chr4.2:67554175-67554194 MS.gene85051:CDS 20.0%
!!! AATTTTATTGGGCTTATTAT+TGG - chr4.2:67554371-67554390 MS.gene85051:CDS 20.0%
!!! ATTTTATTGGGCTTATTATT+GGG - chr4.2:67554372-67554391 MS.gene85051:CDS 20.0%
! ATCCAATTGTTTCAACAATT+TGG - chr4.2:67555088-67555107 MS.gene85051:CDS 25.0%
! ATCCCCATATTATCATATAT+AGG + chr4.2:67554182-67554201 None:intergenic 25.0%
! ATGATACAAATCTGTACATT+GGG - chr4.2:67555032-67555051 MS.gene85051:CDS 25.0%
! CTATTCAATGTTTGAATTTC+AGG + chr4.2:67554074-67554093 None:intergenic 25.0%
! TATATGATAATATGGGGATT+AGG - chr4.2:67554183-67554202 MS.gene85051:CDS 25.0%
! TGTTATGGCAAAAGTTATTA+AGG - chr4.2:67555117-67555136 MS.gene85051:CDS 25.0%
AAATCAGGAAGTTGAATTAC+CGG + chr4.2:67554029-67554048 None:intergenic 30.0%
AATTCAACTTCCTGATTTCA+TGG - chr4.2:67554031-67554050 MS.gene85051:CDS 30.0%
ATTAGTAGAATGTTGCAATC+TGG - chr4.2:67554107-67554126 MS.gene85051:CDS 30.0%
ATTCAACTTCCTGATTTCAT+GGG - chr4.2:67554032-67554051 MS.gene85051:CDS 30.0%
CACCAAATTGTTGAAACAAT+TGG + chr4.2:67555093-67555112 None:intergenic 30.0%
GATGATACAAATCTGTACAT+TGG - chr4.2:67555031-67555050 MS.gene85051:CDS 30.0%
GATTAAGACTACTAGTACTT+TGG - chr4.2:67554898-67554917 MS.gene85051:CDS 30.0%
TGATGAGTATCAGAATTTCT+TGG - chr4.2:67554844-67554863 MS.gene85051:CDS 30.0%
TTCTGAGTATGAGAAATTCA+TGG - chr4.2:67555954-67555973 MS.gene85051:CDS 30.0%
! ACAATTTGGTGAGATTGTTA+TGG - chr4.2:67555102-67555121 MS.gene85051:CDS 30.0%
! ATCCGGGCTATAATTTTATT+GGG - chr4.2:67554360-67554379 MS.gene85051:CDS 30.0%
! TATCCGGGCTATAATTTTAT+TGG - chr4.2:67554359-67554378 MS.gene85051:CDS 30.0%
AATGCAATTGTTGCCATGAA+TGG - chr4.2:67555205-67555224 MS.gene85051:CDS 35.0%
ACAGGTTTGAGTAAAGGATA+CGG - chr4.2:67555148-67555167 MS.gene85051:CDS 35.0%
ACTACTAGTACTTTGGCAAT+TGG - chr4.2:67554905-67554924 MS.gene85051:CDS 35.0%
AGCCCAATAAAATTATAGCC+CGG + chr4.2:67554365-67554384 None:intergenic 35.0%
GAAGAAAAGGAAATCCAGAT+GGG - chr4.2:67553986-67554005 MS.gene85051:CDS 35.0%
GAAGTATGCTGATATCACAA+TGG - chr4.2:67555177-67555196 MS.gene85051:CDS 35.0%
GTTATTAAGGATCGAATGAC+AGG - chr4.2:67555130-67555149 MS.gene85051:CDS 35.0%
TAGTACTTTGGCAATTGGTT+CGG - chr4.2:67554910-67554929 MS.gene85051:CDS 35.0%
TATCCATCCCAACAATATAC+CGG - chr4.2:67555355-67555374 MS.gene85051:CDS 35.0%
TCATATATAGGTTCAGGTGA+AGG + chr4.2:67554170-67554189 None:intergenic 35.0%
! AGGTTGTTTGTAAGCATTGT+GGG - chr4.2:67554762-67554781 MS.gene85051:CDS 35.0%
! GAATGAGGATTTGCATGTTT+TGG - chr4.2:67554520-67554539 MS.gene85051:CDS 35.0%
!! TAAAGCTTCTTCTGAAGCTT+TGG + chr4.2:67554323-67554342 None:intergenic 35.0%
!! TATACCGATGAAAGAGTATC+CGG - chr4.2:67554343-67554362 MS.gene85051:CDS 35.0%
!! TCATCCTAGTATTGATTGTC+CGG - chr4.2:67554793-67554812 MS.gene85051:CDS 35.0%
!! TTAGGGATGAAGAGTATTGT+AGG - chr4.2:67554675-67554694 MS.gene85051:CDS 35.0%
!!! AGGTTTTGAATGAGCATAAG+AGG - chr4.2:67554615-67554634 MS.gene85051:CDS 35.0%
AAACCATCATCCTCAAGAGT+GGG + chr4.2:67555067-67555086 None:intergenic 40.0%
AATCCACTTCTCTCCGAAAA+CGG - chr4.2:67553819-67553838 MS.gene85051:CDS 40.0%
ACTATGTATCCTCCTATGCA+TGG - chr4.2:67555490-67555509 MS.gene85051:CDS 40.0%
ACTATTGCAGTAAGAGTTGC+TGG - chr4.2:67555247-67555266 MS.gene85051:CDS 40.0%
CAGAATTTCTTGGCTGAGTT+GGG - chr4.2:67554854-67554873 MS.gene85051:CDS 40.0%
CAGGTTTGAGTAAAGGATAC+GGG - chr4.2:67555149-67555168 MS.gene85051:CDS 40.0%
CATTGTGTTCCCATACATGT+TGG + chr4.2:67555668-67555687 None:intergenic 40.0%
CATTTGCAATGCTGTGTGAT+TGG + chr4.2:67555804-67555823 None:intergenic 40.0%
CCAACATATCCTGCATCTTA+TGG - chr4.2:67555712-67555731 MS.gene85051:CDS 40.0%
CCAGATTCAAACGATCAGAA+CGG - chr4.2:67553945-67553964 MS.gene85051:CDS 40.0%
CCATAAGATGCAGGATATGT+TGG + chr4.2:67555715-67555734 None:intergenic 40.0%
CGAAGAAAAGGAAATCCAGA+TGG - chr4.2:67553985-67554004 MS.gene85051:CDS 40.0%
CGAATGACAGGTTTGAGTAA+AGG - chr4.2:67555142-67555161 MS.gene85051:CDS 40.0%
CTTTAGATGATCGTCCTGAA+GGG - chr4.2:67554135-67554154 MS.gene85051:CDS 40.0%
GAAACCCTAATTCCCCAAAA+CGG - chr4.2:67553744-67553763 MS.gene85051:CDS 40.0%
GGTATATTGTTGGGATGGAT+AGG + chr4.2:67555356-67555375 None:intergenic 40.0%
TAAGATGCAGGATATGTTGG+TGG + chr4.2:67555712-67555731 None:intergenic 40.0%
TCAATACCACCCATGAAATC+AGG + chr4.2:67554044-67554063 None:intergenic 40.0%
TCAGAATTTCTTGGCTGAGT+TGG - chr4.2:67554853-67554872 MS.gene85051:CDS 40.0%
TCATTCAAAACCTCATCCAC+AGG + chr4.2:67554608-67554627 None:intergenic 40.0%
TGAATCGTTGTTATCGGTAG+TGG + chr4.2:67553784-67553803 None:intergenic 40.0%
TGGACGTGAATCGTTGTTAT+CGG + chr4.2:67553790-67553809 None:intergenic 40.0%
TTCACCGGACAATCAATACT+AGG + chr4.2:67554800-67554819 None:intergenic 40.0%
TTTAGATGATCGTCCTGAAG+GGG - chr4.2:67554136-67554155 MS.gene85051:CDS 40.0%
! AAGATTGTGATTCGGGGTAA+AGG - chr4.2:67554440-67554459 MS.gene85051:CDS 40.0%
! AGATTGTGATTCGGGGTAAA+GGG - chr4.2:67554441-67554460 MS.gene85051:CDS 40.0%
! AGTACTTTGGCAATTGGTTC+GGG - chr4.2:67554911-67554930 MS.gene85051:CDS 40.0%
! CTGGTGCTAAGATTGTGATT+CGG - chr4.2:67554432-67554451 MS.gene85051:CDS 40.0%
! GAGAGAAGTGGATTTGGAAT+CGG + chr4.2:67553813-67553832 None:intergenic 40.0%
! GAGGTTGTTTGTAAGCATTG+TGG - chr4.2:67554761-67554780 MS.gene85051:CDS 40.0%
! GGTTGTTTGTAAGCATTGTG+GGG - chr4.2:67554763-67554782 MS.gene85051:CDS 40.0%
! GTAGTCTTAATCGCAGATTC+AGG + chr4.2:67554890-67554909 None:intergenic 40.0%
! TGGTGCTAAGATTGTGATTC+GGG - chr4.2:67554433-67554452 MS.gene85051:CDS 40.0%
! TTTGGTGGTCTATAATCAGC+AGG + chr4.2:67554305-67554324 None:intergenic 40.0%
!! AGTATTGATTGTCCGGTGAA+GGG - chr4.2:67554800-67554819 MS.gene85051:CDS 40.0%
!! ATACCGATGAAAGAGTATCC+GGG - chr4.2:67554344-67554363 MS.gene85051:CDS 40.0%
!! GAAGAGTATTGTAGGTTGTG+TGG - chr4.2:67554683-67554702 MS.gene85051:CDS 40.0%
!! GGAAGTTGAATTACCGGTTT+CGG + chr4.2:67554023-67554042 None:intergenic 40.0%
!! TAGTATTGATTGTCCGGTGA+AGG - chr4.2:67554799-67554818 MS.gene85051:CDS 40.0%
!! TGGCTTTGAACAGGATAAGT+GGG + chr4.2:67555322-67555341 None:intergenic 40.0%
!! TGTGTGATTGGTCTGAAGTA+GGG + chr4.2:67555792-67555811 None:intergenic 40.0%
!! TTTTCGGAGAGAAGTGGATT+TGG + chr4.2:67553819-67553838 None:intergenic 40.0%
!! TTTTGGGGAATTAGGGTTTC+GGG + chr4.2:67553744-67553763 None:intergenic 40.0%
!!! GGATTTGCATGTTTTGGTTG+AGG - chr4.2:67554526-67554545 MS.gene85051:CDS 40.0%
!!! GTTTTGGGGAATTAGGGTTT+CGG + chr4.2:67553745-67553764 None:intergenic 40.0%
!!! TTTGCATGTTTTGGTTGAGG+CGG - chr4.2:67554529-67554548 MS.gene85051:CDS 40.0%
AAGGTAGGTTGCAACAGAAG+AGG - chr4.2:67554474-67554493 MS.gene85051:CDS 45.0%
ACCGACAAAGATCAATCAGG+CGG - chr4.2:67553870-67553889 MS.gene85051:CDS 45.0%
ACTGCATTGTAGTAAGGTGG+AGG + chr4.2:67555745-67555764 None:intergenic 45.0%
AGCATAAGAGGCAGCAACTT+AGG - chr4.2:67554627-67554646 MS.gene85051:CDS 45.0%
AGGCACATTTCCAATGCTCT+GGG + chr4.2:67555881-67555900 None:intergenic 45.0%
AGGTAGGTTGCAACAGAAGA+GGG - chr4.2:67554475-67554494 MS.gene85051:CDS 45.0%
AGTACACCACAAGCTGGATT+AGG - chr4.2:67554983-67555002 MS.gene85051:CDS 45.0%
ATACATAGTTGATCCAGGCG+GGG + chr4.2:67555479-67555498 None:intergenic 45.0%
ATGAATGGCTATCGCCTTGA+GGG - chr4.2:67555220-67555239 MS.gene85051:CDS 45.0%
ATTCCCCAAAACGGCATCAA+CGG - chr4.2:67553753-67553772 MS.gene85051:CDS 45.0%
CAAACCATCATCCTCAAGAG+TGG + chr4.2:67555068-67555087 None:intergenic 45.0%
CAACTTCCTGATTTCATGGG+TGG - chr4.2:67554035-67554054 MS.gene85051:CDS 45.0%
CCGTTCTGATCGTTTGAATC+TGG + chr4.2:67553948-67553967 None:intergenic 45.0%
CCTTCAGGACGATCATCTAA+AGG + chr4.2:67554137-67554156 None:intergenic 45.0%
CCTTTAGATGATCGTCCTGA+AGG - chr4.2:67554134-67554153 MS.gene85051:CDS 45.0%
CTCTCCGAAAACGGTTTAAC+CGG - chr4.2:67553828-67553847 MS.gene85051:CDS 45.0%
GAACCAGTATTGTTAGCCCA+AGG + chr4.2:67554956-67554975 None:intergenic 45.0%
GACTTCGACGTTTAAGAGTG+AGG - chr4.2:67554742-67554761 MS.gene85051:CDS 45.0%
GATACATAGTTGATCCAGGC+GGG + chr4.2:67555480-67555499 None:intergenic 45.0%
GATCGTTTGAATCTGGCTGT+GGG + chr4.2:67553941-67553960 None:intergenic 45.0%
GCATAAGAGGCAGCAACTTA+GGG - chr4.2:67554628-67554647 MS.gene85051:CDS 45.0%
GCATAAGGATTGTATGGAGG+AGG + chr4.2:67555451-67555470 None:intergenic 45.0%
GGAACCGACAAAGATCAATC+AGG - chr4.2:67553867-67553886 MS.gene85051:CDS 45.0%
GGAACTGCATTGTAGTAAGG+TGG + chr4.2:67555748-67555767 None:intergenic 45.0%
GGAGCATAAGGATTGTATGG+AGG + chr4.2:67555454-67555473 None:intergenic 45.0%
GGAGGAACTGCATTGTAGTA+AGG + chr4.2:67555751-67555770 None:intergenic 45.0%
GGAGGATACATAGTTGATCC+AGG + chr4.2:67555484-67555503 None:intergenic 45.0%
GGAGGATATCCATAAGATGC+AGG + chr4.2:67555724-67555743 None:intergenic 45.0%
GGATACATAGTTGATCCAGG+CGG + chr4.2:67555481-67555500 None:intergenic 45.0%
GGATTGTATGGAGGAGGAAT+AGG + chr4.2:67555445-67555464 None:intergenic 45.0%
GGTGCTAAGATTGTGATTCG+GGG - chr4.2:67554434-67554453 MS.gene85051:CDS 45.0%
GTACACCACAAGCTGGATTA+GGG - chr4.2:67554984-67555003 MS.gene85051:CDS 45.0%
GTGTTCCCATACATGTTGGT+CGG + chr4.2:67555664-67555683 None:intergenic 45.0%
GTTTCGGGATTATCGTTGAG+CGG + chr4.2:67553729-67553748 None:intergenic 45.0%
TACTCAGAAGAGGATGGAGA+AGG - chr4.2:67554406-67554425 MS.gene85051:CDS 45.0%
TAGCCCGGATACTCTTTCAT+CGG + chr4.2:67554350-67554369 None:intergenic 45.0%
TATGCCTCCTCCTAACTCAT+CGG - chr4.2:67555906-67555925 MS.gene85051:CDS 45.0%
TCCGCCTGATTGATCTTTGT+CGG + chr4.2:67553874-67553893 None:intergenic 45.0%
TGATCGTTTGAATCTGGCTG+TGG + chr4.2:67553942-67553961 None:intergenic 45.0%
TGCAAATCCTCATTCTCCGA+CGG + chr4.2:67554515-67554534 None:intergenic 45.0%
TGGGCTTATTATTGGGCCTA+GGG - chr4.2:67554379-67554398 MS.gene85051:CDS 45.0%
TTAAACGTCGAAGTCCTCGT+AGG + chr4.2:67554737-67554756 None:intergenic 45.0%
TTATTATCAGACTGCACCCC+AGG + chr4.2:67555622-67555641 None:intergenic 45.0%
TTGGGCTTATTATTGGGCCT+AGG - chr4.2:67554378-67554397 MS.gene85051:CDS 45.0%
TTGTATGGAGGAGGAATAGG+AGG + chr4.2:67555442-67555461 None:intergenic 45.0%
! AAACCGTTTTCGGAGAGAAG+TGG + chr4.2:67553825-67553844 None:intergenic 45.0%
! AATTTCTTGGCTGAGTTGGG+TGG - chr4.2:67554857-67554876 MS.gene85051:CDS 45.0%
! AGAAGTGGATTTGGAATCGG+TGG + chr4.2:67553810-67553829 None:intergenic 45.0%
! ATAGGTTGACCATGCATAGG+AGG + chr4.2:67555502-67555521 None:intergenic 45.0%
! ATCGTTGTTATCGGTAGTGG+TGG + chr4.2:67553781-67553800 None:intergenic 45.0%
! CTGTACCGACCAACATGTAT+GGG - chr4.2:67555656-67555675 MS.gene85051:CDS 45.0%
! GGAGGAGCATAAGGATTGTA+TGG + chr4.2:67555457-67555476 None:intergenic 45.0%
! GGATTTCCTTTTCTTCGTCC+CGG + chr4.2:67553982-67554001 None:intergenic 45.0%
! GGATTTGAAACCTGATCCGT+CGG - chr4.2:67554496-67554515 MS.gene85051:CDS 45.0%
! GTTTGTAAGCATTGTGGGGA+TGG - chr4.2:67554767-67554786 MS.gene85051:CDS 45.0%
! TACACCACAAGCTGGATTAG+GGG - chr4.2:67554985-67555004 MS.gene85051:CDS 45.0%
! TCTGTACCGACCAACATGTA+TGG - chr4.2:67555655-67555674 MS.gene85051:CDS 45.0%
! TGAACACCATAAGGAGGCAT+AGG + chr4.2:67555520-67555539 None:intergenic 45.0%
! TTCTGGAAGCAATCCTCCTT+GGG - chr4.2:67554937-67554956 MS.gene85051:CDS 45.0%
!! AGCTTCTTCTGAAGCTTTGG+TGG + chr4.2:67554320-67554339 None:intergenic 45.0%
!! CTGGCTTTGAACAGGATAAG+TGG + chr4.2:67555323-67555342 None:intergenic 45.0%
!! CTGTGTGATTGGTCTGAAGT+AGG + chr4.2:67555793-67555812 None:intergenic 45.0%
!! GCTAACAATACTGGTTCAGC+TGG - chr4.2:67554959-67554978 MS.gene85051:CDS 45.0%
!! GGCTTTGAATGGGACGATTA+GGG - chr4.2:67554658-67554677 MS.gene85051:CDS 45.0%
!! GGGTATTGAACACCATAAGG+AGG + chr4.2:67555526-67555545 None:intergenic 45.0%
!! GGTGGGTATTGAACACCATA+AGG + chr4.2:67555529-67555548 None:intergenic 45.0%
!! GTGTGATTGGTCTGAAGTAG+GGG + chr4.2:67555791-67555810 None:intergenic 45.0%
!!! GATGCCGTTTTGGGGAATTA+GGG + chr4.2:67553751-67553770 None:intergenic 45.0%
!!! TGATGCCGTTTTGGGGAATT+AGG + chr4.2:67553752-67553771 None:intergenic 45.0%
!!! TGTTTTGGTTGAGGCGGATA+CGG - chr4.2:67554535-67554554 MS.gene85051:CDS 45.0%
AAGAGGATGGAGAAGGAGAC+TGG - chr4.2:67554413-67554432 MS.gene85051:CDS 50.0%
AAGGGTCGGTGAAAGAAGGT+AGG - chr4.2:67554459-67554478 MS.gene85051:CDS 50.0%
ACAGCATTGCAAATGCGCCT+TGG - chr4.2:67555809-67555828 MS.gene85051:CDS 50.0%
ACCACCGCCGGTATATTGTT+GGG + chr4.2:67555365-67555384 None:intergenic 50.0%
ATGCAGCAGAATTACCCTCC+TGG - chr4.2:67555601-67555620 MS.gene85051:CDS 50.0%
ATGGATAGGCACCAATTGGC+TGG + chr4.2:67555342-67555361 None:intergenic 50.0%
CAGCATTGCAAATGCGCCTT+GGG - chr4.2:67555810-67555829 MS.gene85051:CDS 50.0%
CATGAATGGCTATCGCCTTG+AGG - chr4.2:67555219-67555238 MS.gene85051:CDS 50.0%
CCAGTATTGTTAGCCCAAGG+AGG + chr4.2:67554953-67554972 None:intergenic 50.0%
CCATCCCAACAATATACCGG+CGG - chr4.2:67555358-67555377 MS.gene85051:CDS 50.0%
CCTCCTTGGGCTAACAATAC+TGG - chr4.2:67554950-67554969 MS.gene85051:CDS 50.0%
CCTGTTCAAAGCCAGCCAAT+TGG - chr4.2:67555328-67555347 MS.gene85051:CDS 50.0%
CTAGGGGGAATACTCAGAAG+AGG - chr4.2:67554396-67554415 MS.gene85051:CDS 50.0%
CTCAAGGCGATAGCCATTCA+TGG + chr4.2:67555221-67555240 None:intergenic 50.0%
CTCTTCTGAGTATTCCCCCT+AGG + chr4.2:67554398-67554417 None:intergenic 50.0%
CTGCAATAGTTCGACCCTCA+AGG + chr4.2:67555237-67555256 None:intergenic 50.0%
GAGGCACATTTCCAATGCTC+TGG + chr4.2:67555882-67555901 None:intergenic 50.0%
GATTGATCTGCAGACGAAGG+AGG + chr4.2:67555859-67555878 None:intergenic 50.0%
GCAGATCAATCCCAGAGCAT+TGG - chr4.2:67555868-67555887 MS.gene85051:CDS 50.0%
GCATTGTAGTAAGGTGGAGG+AGG + chr4.2:67555742-67555761 None:intergenic 50.0%
GGCTTATTATTGGGCCTAGG+GGG - chr4.2:67554381-67554400 MS.gene85051:CDS 50.0%
GGGCTTATTATTGGGCCTAG+GGG - chr4.2:67554380-67554399 MS.gene85051:CDS 50.0%
GGGGAATACTCAGAAGAGGA+TGG - chr4.2:67554400-67554419 MS.gene85051:CDS 50.0%
GGTAAAGGGTCGGTGAAAGA+AGG - chr4.2:67554455-67554474 MS.gene85051:CDS 50.0%
GGTCAACCTATGCCTCCTTA+TGG - chr4.2:67555511-67555530 MS.gene85051:CDS 50.0%
GGTGGTCTATAATCAGCAGG+TGG + chr4.2:67554302-67554321 None:intergenic 50.0%
GTATTTGCCACCCACTCTTG+AGG - chr4.2:67555054-67555073 MS.gene85051:CDS 50.0%
TACATAGTTGATCCAGGCGG+GGG + chr4.2:67555478-67555497 None:intergenic 50.0%
TCAGCAGGTGGCTTAAAAGC+AGG + chr4.2:67554290-67554309 None:intergenic 50.0%
TCCGAAAACGGTTTAACCGG+CGG - chr4.2:67553831-67553850 MS.gene85051:CDS 50.0%
TCGGCGGAAAAGACGTCATA+TGG - chr4.2:67555925-67555944 MS.gene85051:CDS 50.0%
TGCAGCAGAATTACCCTCCT+GGG - chr4.2:67555602-67555621 MS.gene85051:CDS 50.0%
TGCTGCATTTCACCAGAAGC+CGG + chr4.2:67555589-67555608 None:intergenic 50.0%
TGGGATGGATAGGCACCAAT+TGG + chr4.2:67555346-67555365 None:intergenic 50.0%
TGGGATTGATCTGCAGACGA+AGG + chr4.2:67555862-67555881 None:intergenic 50.0%
! GATGAGTTAGGAGGAGGCAT+AGG + chr4.2:67555907-67555926 None:intergenic 50.0%
! GGCATAGGTTGACCATGCAT+AGG + chr4.2:67555505-67555524 None:intergenic 50.0%
! GGCTGATGATGAACCGAAAC+CGG - chr4.2:67554007-67554026 MS.gene85051:CDS 50.0%
! GTCTTTTCCGCCGATGAGTT+AGG + chr4.2:67555919-67555938 None:intergenic 50.0%
! TGTAAGCATTGTGGGGATGG+TGG - chr4.2:67554770-67554789 MS.gene85051:CDS 50.0%
! TGTGATTCGGGGTAAAGGGT+CGG - chr4.2:67554445-67554464 MS.gene85051:CDS 50.0%
! TTTCCTTTTCTTCGTCCCGG+TGG + chr4.2:67553979-67553998 None:intergenic 50.0%
! TTTTCCGCCGATGAGTTAGG+AGG + chr4.2:67555916-67555935 None:intergenic 50.0%
!! ATCTTTGTCGGTTCCGCTTC+GGG + chr4.2:67553862-67553881 None:intergenic 50.0%
!! CCAATTGGCTGGCTTTGAAC+AGG + chr4.2:67555331-67555350 None:intergenic 50.0%
!! CGGCTTTGAATGGGACGATT+AGG - chr4.2:67554657-67554676 MS.gene85051:CDS 50.0%
!! GATCTTTGTCGGTTCCGCTT+CGG + chr4.2:67553863-67553882 None:intergenic 50.0%
!! GTTCTGGAAGCAATCCTCCT+TGG - chr4.2:67554936-67554955 MS.gene85051:CDS 50.0%
AATCTGGCTGTGGGTCCCAT+CGG + chr4.2:67553932-67553951 None:intergenic 55.0%
ACCTGATCCGTCGGAGAATG+AGG - chr4.2:67554505-67554524 MS.gene85051:CDS 55.0%
AGGTGGGGCGGAATGATTAC+TGG + chr4.2:67555836-67555855 None:intergenic 55.0%
AGTGCTCCTCCTGGGAGTTA+TGG - chr4.2:67555394-67555413 MS.gene85051:CDS 55.0%
CAATACCCACCCATGCCTAC+AGG - chr4.2:67555538-67555557 MS.gene85051:CDS 55.0%
CCACCCACTCTTGAGGATGA+TGG - chr4.2:67555061-67555080 MS.gene85051:CDS 55.0%
CCATCATCCTCAAGAGTGGG+TGG + chr4.2:67555064-67555083 None:intergenic 55.0%
CCGCCGGTATATTGTTGGGA+TGG + chr4.2:67555361-67555380 None:intergenic 55.0%
CGGTTCATCATCAGCCCATC+TGG + chr4.2:67554003-67554022 None:intergenic 55.0%
CTGCATTTCACCAGAAGCCG+GGG + chr4.2:67555587-67555606 None:intergenic 55.0%
GAAGGAGATCTAGCCCCTTC+AGG + chr4.2:67554152-67554171 None:intergenic 55.0%
GACCACCGCCGGTATATTGT+TGG + chr4.2:67555366-67555385 None:intergenic 55.0%
GAGGAATAGGAGGTCCCCAT+GGG + chr4.2:67555432-67555451 None:intergenic 55.0%
GCAGCAGAATTACCCTCCTG+GGG - chr4.2:67555603-67555622 MS.gene85051:CDS 55.0%
GCGGAATGATTACTGGCCCA+AGG + chr4.2:67555829-67555848 None:intergenic 55.0%
GCTATTGCAGCCTGTGGATG+AGG - chr4.2:67554595-67554614 MS.gene85051:CDS 55.0%
GCTGCATTTCACCAGAAGCC+GGG + chr4.2:67555588-67555607 None:intergenic 55.0%
GCTGGTAGTACACCACAAGC+TGG - chr4.2:67554977-67554996 MS.gene85051:CDS 55.0%
GGAGAAGCTATTGCAGCCTG+TGG - chr4.2:67554589-67554608 MS.gene85051:CDS 55.0%
GGATTATCGTTGAGCGGTGG+TGG + chr4.2:67553723-67553742 None:intergenic 55.0%
GTACCTCCATAACTCCCAGG+AGG + chr4.2:67555403-67555422 None:intergenic 55.0%
GTAGGTTGTGTGGTGAGCCT+GGG - chr4.2:67554693-67554712 MS.gene85051:CDS 55.0%
GTCAGTATGCGTGTCCTACG+AGG - chr4.2:67554720-67554739 MS.gene85051:CDS 55.0%
TATCAGACTGCACCCCAGGA+GGG + chr4.2:67555618-67555637 None:intergenic 55.0%
TCCCAACAATATACCGGCGG+TGG - chr4.2:67555361-67555380 MS.gene85051:CDS 55.0%
TCCTCATTCTCCGACGGATC+AGG + chr4.2:67554509-67554528 None:intergenic 55.0%
TCGGGATTATCGTTGAGCGG+TGG + chr4.2:67553726-67553745 None:intergenic 55.0%
TGATCTGCAGACGAAGGAGG+AGG + chr4.2:67555856-67555875 None:intergenic 55.0%
TGCATTTCACCAGAAGCCGG+GGG + chr4.2:67555586-67555605 None:intergenic 55.0%
TGTAGGTTGTGTGGTGAGCC+TGG - chr4.2:67554692-67554711 MS.gene85051:CDS 55.0%
TTATCAGACTGCACCCCAGG+AGG + chr4.2:67555619-67555638 None:intergenic 55.0%
TTCCCAGTAGCACCCTTCAC+CGG + chr4.2:67554815-67554834 None:intergenic 55.0%
! AGGGGCTGGTGCGGTTAAAA+AGG - chr4.2:67555003-67555022 MS.gene85051:CDS 55.0%
! GAGTTAGGAGGAGGCATAGG+TGG + chr4.2:67555904-67555923 None:intergenic 55.0%
! GGAGTACCTCCATAACTCCC+AGG + chr4.2:67555406-67555425 None:intergenic 55.0%
! GGATATGTTGGTGGAGCTGC+TGG + chr4.2:67555703-67555722 None:intergenic 55.0%
! TATGTTGGTGGAGCTGCTGG+TGG + chr4.2:67555700-67555719 None:intergenic 55.0%
! TTAGGAGGAGGCATAGGTGG+AGG + chr4.2:67555901-67555920 None:intergenic 55.0%
!! ATCGTTGAGCGGTGGTGGAT+TGG + chr4.2:67553718-67553737 None:intergenic 55.0%
!! ATGGAGGTACTCCTGTCCCA+TGG - chr4.2:67555413-67555432 MS.gene85051:CDS 55.0%
!! GAGAGTATCGTGCTCGTGAG+AGG - chr4.2:67554216-67554235 MS.gene85051:CDS 55.0%
!! GATTGGTCTGAAGTAGGGGC+AGG + chr4.2:67555787-67555806 None:intergenic 55.0%
!! GCAATTGGTTCGGGCAGTTC+TGG - chr4.2:67554920-67554939 MS.gene85051:CDS 55.0%
!! GCCGCCGGTTAAACCGTTTT+CGG + chr4.2:67553835-67553854 None:intergenic 55.0%
!! GGGTGCTACTGGGAAGAAGA+TGG - chr4.2:67554820-67554839 MS.gene85051:CDS 55.0%
!! TGGAGGTACTCCTGTCCCAT+GGG - chr4.2:67555414-67555433 MS.gene85051:CDS 55.0%
!!! GGTGCCGTTGATGCCGTTTT+GGG + chr4.2:67553760-67553779 None:intergenic 55.0%
!!! GTGCCGTTGATGCCGTTTTG+GGG + chr4.2:67553759-67553778 None:intergenic 55.0%
!!! TGGTGCCGTTGATGCCGTTT+TGG + chr4.2:67553761-67553780 None:intergenic 55.0%
ACCTCCAGGACCACCTGCAT+CGG - chr4.2:67555291-67555310 MS.gene85051:CDS 60.0%
ATACCGGCGGTGGTCCCATT+GGG - chr4.2:67555371-67555390 MS.gene85051:CDS 60.0%
ATAGGAGGTCCCCATGGGAC+AGG + chr4.2:67555427-67555446 None:intergenic 60.0%
ATAGTTGATCCAGGCGGGGG+AGG + chr4.2:67555475-67555494 None:intergenic 60.0%
ATTTCACCAGAAGCCGGGGG+TGG + chr4.2:67555583-67555602 None:intergenic 60.0%
CACGCATACTGACGATGCCC+AGG + chr4.2:67554713-67554732 None:intergenic 60.0%
CCAGCCCCTAATCCAGCTTG+TGG + chr4.2:67554992-67555011 None:intergenic 60.0%
CCTCAGCCTGTTGTACCTCC+AGG - chr4.2:67555277-67555296 MS.gene85051:CDS 60.0%
CTGCAGACGAAGGAGGAGGT+GGG + chr4.2:67555852-67555871 None:intergenic 60.0%
GCAGCAACTTAGGGAGCTCG+CGG - chr4.2:67554637-67554656 MS.gene85051:CDS 60.0%
GCCTCCTCCTAACTCATCGG+CGG - chr4.2:67555909-67555928 MS.gene85051:CDS 60.0%
GCTCCTCCTGGGAGTTATGG+AGG - chr4.2:67555397-67555416 MS.gene85051:CDS 60.0%
GGAGGAATAGGAGGTCCCCA+TGG + chr4.2:67555433-67555452 None:intergenic 60.0%
GGATACGGCTGATGCGCTTG+AGG - chr4.2:67554550-67554569 MS.gene85051:CDS 60.0%
TAAGTGGGCACAGCCGATGC+AGG + chr4.2:67555307-67555326 None:intergenic 60.0%
TATACCGGCGGTGGTCCCAT+TGG - chr4.2:67555370-67555389 MS.gene85051:CDS 60.0%
TCCGCCGATGAGTTAGGAGG+AGG + chr4.2:67555913-67555932 None:intergenic 60.0%
TCTGCAGACGAAGGAGGAGG+TGG + chr4.2:67555853-67555872 None:intergenic 60.0%
TGCAGACGAAGGAGGAGGTG+GGG + chr4.2:67555851-67555870 None:intergenic 60.0%
TTTCACCAGAAGCCGGGGGT+GGG + chr4.2:67555582-67555601 None:intergenic 60.0%
! AGCTGGATTAGGGGCTGGTG+CGG - chr4.2:67554994-67555013 MS.gene85051:CDS 60.0%
! CCACAAGCTGGATTAGGGGC+TGG - chr4.2:67554989-67555008 MS.gene85051:CDS 60.0%
! CCTGGAGGTACAACAGGCTG+AGG + chr4.2:67555280-67555299 None:intergenic 60.0%
! CCTTTTCTTCGTCCCGGTGG+CGG + chr4.2:67553976-67553995 None:intergenic 60.0%
! GGAGCTGCTGGTGGCATTGA+AGG + chr4.2:67555691-67555710 None:intergenic 60.0%
! GGAGGTACAACAGGCTGAGG+AGG + chr4.2:67555277-67555296 None:intergenic 60.0%
! GGTCTGAAGTAGGGGCAGGA+GGG + chr4.2:67555783-67555802 None:intergenic 60.0%
! GGTGGTCCTGGAGGTACAAC+AGG + chr4.2:67555286-67555305 None:intergenic 60.0%
! GTCTGAAGTAGGGGCAGGAG+GGG + chr4.2:67555782-67555801 None:intergenic 60.0%
! TCTGAAGTAGGGGCAGGAGG+GGG + chr4.2:67555781-67555800 None:intergenic 60.0%
! TGGTCTGAAGTAGGGGCAGG+AGG + chr4.2:67555784-67555803 None:intergenic 60.0%
!! AGGGAGCTCGCGGCTTTGAA+TGG - chr4.2:67554647-67554666 MS.gene85051:CDS 60.0%
!! CCAGGAGGAGCACTCCCAAT+GGG + chr4.2:67555388-67555407 None:intergenic 60.0%
!! CCATTGGGAGTGCTCCTCCT+GGG - chr4.2:67555386-67555405 MS.gene85051:CDS 60.0%
!! GGAGGTACTCCTGTCCCATG+GGG - chr4.2:67555415-67555434 MS.gene85051:CDS 60.0%
!! GGGAGCTCGCGGCTTTGAAT+GGG - chr4.2:67554648-67554667 MS.gene85051:CDS 60.0%
!! GTCCGGTGAAGGGTGCTACT+GGG - chr4.2:67554810-67554829 MS.gene85051:CDS 60.0%
!! GTGGGTCCCATCGGCTTCTA+CGG + chr4.2:67553923-67553942 None:intergenic 60.0%
!! TGTCCGGTGAAGGGTGCTAC+TGG - chr4.2:67554809-67554828 MS.gene85051:CDS 60.0%
AACGCCGCCGTAGAAGCCGA+TGG - chr4.2:67553913-67553932 MS.gene85051:CDS 65.0%
ACAGCCGATGCAGGTGGTCC+TGG + chr4.2:67555298-67555317 None:intergenic 65.0%
ACCAGGGGGACCTGTAGGCA+TGG + chr4.2:67555551-67555570 None:intergenic 65.0%
ACGCCGCCGTAGAAGCCGAT+GGG - chr4.2:67553914-67553933 MS.gene85051:CDS 65.0%
ACTCCCAATGGGACCACCGC+CGG + chr4.2:67555377-67555396 None:intergenic 65.0%
AGAACGGTGAAGCCGCCACC+GGG - chr4.2:67553961-67553980 MS.gene85051:CDS 65.0%
AGACGAAGGAGGAGGTGGGG+CGG + chr4.2:67555848-67555867 None:intergenic 65.0%
CAGAACGGTGAAGCCGCCAC+CGG - chr4.2:67553960-67553979 MS.gene85051:CDS 65.0%
CCAGGGGGACCTGTAGGCAT+GGG + chr4.2:67555550-67555569 None:intergenic 65.0%
CCGCCACCGGGACGAAGAAA+AGG - chr4.2:67553973-67553992 MS.gene85051:CDS 65.0%
GCTTGAGGCTGCGGCTGGTA+TGG - chr4.2:67554565-67554584 MS.gene85051:CDS 65.0%
GGCTGATGCGCTTGAGGCTG+CGG - chr4.2:67554556-67554575 MS.gene85051:CDS 65.0%
GGGGACCTGTAGGCATGGGT+GGG + chr4.2:67555546-67555565 None:intergenic 65.0%
TGAGGCTGCGGCTGGTATGG+TGG - chr4.2:67554568-67554587 MS.gene85051:CDS 65.0%
TTCACCAGAAGCCGGGGGTG+GGG + chr4.2:67555581-67555600 None:intergenic 65.0%
!! CCCAGGAGGAGCACTCCCAA+TGG + chr4.2:67555389-67555408 None:intergenic 65.0%
!! CCCATTGGGAGTGCTCCTCC+TGG - chr4.2:67555385-67555404 MS.gene85051:CDS 65.0%
!! GGTCCCATCGGCTTCTACGG+CGG + chr4.2:67553920-67553939 None:intergenic 65.0%
ACCGGCGGCAACACCCGAAG+CGG - chr4.2:67553846-67553865 MS.gene85051:CDS 70.0%
CCCATGCCTACAGGTCCCCC+TGG - chr4.2:67555547-67555566 MS.gene85051:CDS 70.0%
CCTTATGCTCCTCCCCCGCC+TGG - chr4.2:67555463-67555482 MS.gene85051:CDS 70.0%
GAAGTAGGGGCAGGAGGGGG+AGG + chr4.2:67555778-67555797 None:intergenic 70.0%
GATGCGCTTGAGGCTGCGGC+TGG - chr4.2:67554560-67554579 MS.gene85051:CDS 70.0%
GCCGATGCAGGTGGTCCTGG+AGG + chr4.2:67555295-67555314 None:intergenic 70.0%
GGGGGACCTGTAGGCATGGG+TGG + chr4.2:67555547-67555566 None:intergenic 70.0%
GTGGCACCAGGGGGACCTGT+AGG + chr4.2:67555556-67555575 None:intergenic 70.0%
GTGGGCACAGCCGATGCAGG+TGG + chr4.2:67555304-67555323 None:intergenic 70.0%
TCACCAGAAGCCGGGGGTGG+GGG + chr4.2:67555580-67555599 None:intergenic 70.0%
! CCAGGCGGGGGAGGAGCATA+AGG + chr4.2:67555466-67555485 None:intergenic 70.0%
! TCCGCTTCGGGTGTTGCCGC+CGG + chr4.2:67553850-67553869 None:intergenic 70.0%
ACTCCCCCACCCCCGGCTTC+TGG - chr4.2:67555574-67555593 MS.gene85051:CDS 75.0%
AGAAGCCGGGGGTGGGGGAG+TGG + chr4.2:67555575-67555594 None:intergenic 75.0%
GGGGTGGGGGAGTGGCACCA+GGG + chr4.2:67555567-67555586 None:intergenic 75.0%
GGGTGGGGGAGTGGCACCAG+GGG + chr4.2:67555566-67555585 None:intergenic 75.0%
GGTGGGGGAGTGGCACCAGG+GGG + chr4.2:67555565-67555584 None:intergenic 75.0%
GTAGGGGCAGGAGGGGGAGG+TGG + chr4.2:67555775-67555794 None:intergenic 75.0%
! GCAGGAGGGGGAGGTGGTGG+AGG + chr4.2:67555769-67555788 None:intergenic 75.0%
!! TGGTGCCACTCCCCCACCCC+CGG - chr4.2:67555567-67555586 MS.gene85051:CDS 75.0%
! GGGGCAGGAGGGGGAGGTGG+TGG + chr4.2:67555772-67555791 None:intergenic 80.0%
! GGGGGTGGGGGAGTGGCACC+AGG + chr4.2:67555568-67555587 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 67553699 67555990 67553699 ID=MS.gene85051
chr4.2 mRNA 67553699 67555990 67553699 ID=MS.gene85051.t1;Parent=MS.gene85051
chr4.2 exon 67553699 67555990 67553699 ID=MS.gene85051.t1.exon1;Parent=MS.gene85051.t1
chr4.2 CDS 67553699 67555990 67553699 ID=cds.MS.gene85051.t1;Parent=MS.gene85051.t1
Gene Sequence

>MS.gene85051

ATGGAGGCTCTCGATTCCAATCCACCACCGCTCAACGATAATCCCGAAACCCTAATTCCCCAAAACGGCATCAACGGCACCACCACTACCGATAACAACGATTCACGTCCACCGATTCCAAATCCACTTCTCTCCGAAAACGGTTTAACCGGCGGCAACACCCGAAGCGGAACCGACAAAGATCAATCAGGCGGAGAAGAAGAAACAACAAGCAAACGCCGCCGTAGAAGCCGATGGGACCCACAGCCAGATTCAAACGATCAGAACGGTGAAGCCGCCACCGGGACGAAGAAAAGGAAATCCAGATGGGCTGATGATGAACCGAAACCGGTAATTCAACTTCCTGATTTCATGGGTGGTATTGAATTTGATCCTGAAATTCAAACATTGAATAGTAGATTGCTTGAGATTAGTAGAATGTTGCAATCTGGTTTGCCTTTAGATGATCGTCCTGAAGGGGCTAGATCTCCTTCACCTGAACCTATATATGATAATATGGGGATTAGGATTAATACTAGAGAGTATCGTGCTCGTGAGAGGTTTCAGAAAGAGAGACAAGAGATTATTTCTCAGATTATTAAGAAAAATCCTGCTTTTAAGCCACCTGCTGATTATAGACCACCAAAGCTTCAGAAGAAGCTTTATATACCGATGAAAGAGTATCCGGGCTATAATTTTATTGGGCTTATTATTGGGCCTAGGGGGAATACTCAGAAGAGGATGGAGAAGGAGACTGGTGCTAAGATTGTGATTCGGGGTAAAGGGTCGGTGAAAGAAGGTAGGTTGCAACAGAAGAGGGATTTGAAACCTGATCCGTCGGAGAATGAGGATTTGCATGTTTTGGTTGAGGCGGATACGGCTGATGCGCTTGAGGCTGCGGCTGGTATGGTGGAGAAGCTATTGCAGCCTGTGGATGAGGTTTTGAATGAGCATAAGAGGCAGCAACTTAGGGAGCTCGCGGCTTTGAATGGGACGATTAGGGATGAAGAGTATTGTAGGTTGTGTGGTGAGCCTGGGCATCGTCAGTATGCGTGTCCTACGAGGACTTCGACGTTTAAGAGTGAGGTTGTTTGTAAGCATTGTGGGGATGGTGGTCATCCTAGTATTGATTGTCCGGTGAAGGGTGCTACTGGGAAGAAGATGGATGATGAGTATCAGAATTTCTTGGCTGAGTTGGGTGGTACTGTTCCTGAATCTGCGATTAAGACTACTAGTACTTTGGCAATTGGTTCGGGCAGTTCTGGAAGCAATCCTCCTTGGGCTAACAATACTGGTTCAGCTGGTAGTACACCACAAGCTGGATTAGGGGCTGGTGCGGTTAAAAAGGAAATTGATGATACAAATCTGTACATTGGGTATTTGCCACCCACTCTTGAGGATGATGGTTTGATCCAATTGTTTCAACAATTTGGTGAGATTGTTATGGCAAAAGTTATTAAGGATCGAATGACAGGTTTGAGTAAAGGATACGGGTTTGTGAAGTATGCTGATATCACAATGGCAAACAATGCAATTGTTGCCATGAATGGCTATCGCCTTGAGGGTCGAACTATTGCAGTAAGAGTTGCTGGTAAGCCTCCTCAGCCTGTTGTACCTCCAGGACCACCTGCATCGGCTGTGCCCACTTATCCTGTTCAAAGCCAGCCAATTGGTGCCTATCCATCCCAACAATATACCGGCGGTGGTCCCATTGGGAGTGCTCCTCCTGGGAGTTATGGAGGTACTCCTGTCCCATGGGGACCTCCTATTCCTCCTCCATACAATCCTTATGCTCCTCCCCCGCCTGGATCAACTATGTATCCTCCTATGCATGGTCAACCTATGCCTCCTTATGGTGTTCAATACCCACCCATGCCTACAGGTCCCCCTGGTGCCACTCCCCCACCCCCGGCTTCTGGTGAAATGCAGCAGAATTACCCTCCTGGGGTGCAGTCTGATAATAATTCATCTACTCAATCTGTACCGACCAACATGTATGGGAACACAATGCCTTCAATGCCACCAGCAGCTCCACCAACATATCCTGCATCTTATGGATATCCTCCTCCACCTTACTACAATGCAGTTCCTCCACCACCTCCCCCTCCTGCCCCTACTTCAGACCAATCACACAGCATTGCAAATGCGCCTTGGGCCAGTAATCATTCCGCCCCACCTCCTCCTTCGTCTGCAGATCAATCCCAGAGCATTGGAAATGTGCCTCCACCTATGCCTCCTCCTAACTCATCGGCGGAAAAGACGTCATATGGAGCTGATTCTGAGTATGAGAAATTCATGGCAGAGATGAAATGA
Protein sequence

>MS.gene85051.t1

MEALDSNPPPLNDNPETLIPQNGINGTTTTDNNDSRPPIPNPLLSENGLTGGNTRSGTDKDQSGGEEETTSKRRRRSRWDPQPDSNDQNGEAATGTKKRKSRWADDEPKPVIQLPDFMGGIEFDPEIQTLNSRLLEISRMLQSGLPLDDRPEGARSPSPEPIYDNMGIRINTREYRARERFQKERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHVLVEADTADALEAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPTRTSTFKSEVVCKHCGDGGHPSIDCPVKGATGKKMDDEYQNFLAELGGTVPESAIKTTSTLAIGSGSSGSNPPWANNTGSAGSTPQAGLGAGAVKKEIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIVAMNGYRLEGRTIAVRVAGKPPQPVVPPGPPASAVPTYPVQSQPIGAYPSQQYTGGGPIGSAPPGSYGGTPVPWGPPIPPPYNPYAPPPPGSTMYPPMHGQPMPPYGVQYPPMPTGPPGATPPPPASGEMQQNYPPGVQSDNNSSTQSVPTNMYGNTMPSMPPAAPPTYPASYGYPPPPYYNAVPPPPPPPAPTSDQSHSIANAPWASNHSAPPPPSSADQSQSIGNVPPPMPPPNSSAEKTSYGADSEYEKFMAEMK