Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85442.t1 | XP_003624050.2 | 94.3 | 352 | 20 | 0 | 1 | 352 | 1 | 352 | 3.20E-183 | 651 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85442.t1 | Q9LMM6 | 56.6 | 334 | 137 | 2 | 1 | 333 | 1 | 327 | 1.0e-100 | 368.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85442.t1 | G7L6L1 | 94.3 | 352 | 20 | 0 | 1 | 352 | 1 | 352 | 2.3e-183 | 651.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060259 | MS.gene85442 | 0.808642 | 2.80E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85442.t1 | MTR_7g078700 | 94.318 | 352 | 20 | 0 | 1 | 352 | 1 | 352 | 0.0 | 679 |
| MS.gene85442.t1 | MTR_8g028710 | 66.947 | 357 | 112 | 3 | 1 | 351 | 1 | 357 | 7.40e-172 | 482 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85442.t1 | AT2G46080 | 58.213 | 347 | 145 | 0 | 1 | 347 | 1 | 347 | 2.39e-148 | 422 |
| MS.gene85442.t1 | AT1G01550 | 56.213 | 338 | 139 | 3 | 1 | 336 | 1 | 331 | 1.16e-132 | 382 |
| MS.gene85442.t1 | AT1G01550 | 56.213 | 338 | 139 | 3 | 1 | 336 | 1 | 331 | 1.16e-132 | 382 |
| MS.gene85442.t1 | AT4G01360 | 40.426 | 329 | 168 | 7 | 16 | 331 | 10 | 323 | 9.27e-71 | 224 |
| MS.gene85442.t1 | AT3G61500 | 36.957 | 184 | 104 | 4 | 1 | 182 | 2 | 175 | 3.98e-28 | 111 |
| MS.gene85442.t1 | AT3G61500 | 37.853 | 177 | 98 | 4 | 9 | 183 | 10 | 176 | 2.01e-27 | 110 |
Find 70 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTACAACACCTTGGATAAT+AGG | 0.211183 | 7.2:-26989267 | None:intergenic |
| TGAAAATTGTGGCAGCATTT+TGG | 0.214121 | 7.2:+26988939 | MS.gene85442:CDS |
| TCCCATTTGGAAATCCTTTC+CGG | 0.219881 | 7.2:+26988482 | MS.gene85442:CDS |
| ATCTTGTAAATGAGGAAATT+AGG | 0.221961 | 7.2:+26989169 | MS.gene85442:CDS |
| CGGGCATGTTCTTCACTTGA+TGG | 0.229319 | 7.2:+26988880 | MS.gene85442:CDS |
| AACAACTTCATCCTTGCTTT+TGG | 0.245955 | 7.2:-26988602 | None:intergenic |
| TACAAAGAACTTGATGGATA+TGG | 0.310252 | 7.2:+26989098 | MS.gene85442:CDS |
| ACTGTCAATGACCACATCTT+AGG | 0.322065 | 7.2:+26989453 | MS.gene85442:CDS |
| TCTTGTAAATGAGGAAATTA+GGG | 0.343932 | 7.2:+26989170 | MS.gene85442:CDS |
| GGAGATAACTTAGTGCCTTT+AGG | 0.370904 | 7.2:-26988514 | None:intergenic |
| CAATGCACGTTGCACAATTT+AGG | 0.373178 | 7.2:+26988832 | MS.gene85442:CDS |
| GAAGCTCAAGGTCTGTCATC+AGG | 0.377856 | 7.2:-26988687 | None:intergenic |
| TTGAGCTTCCCGTGACTGAC+TGG | 0.383157 | 7.2:+26988701 | MS.gene85442:CDS |
| TTCTGTAGACCTTTAAAAGT+TGG | 0.385917 | 7.2:-26989147 | None:intergenic |
| CTGTCAATGACCACATCTTA+GGG | 0.398331 | 7.2:+26989454 | MS.gene85442:CDS |
| CGCATGTGATTCTGTTTCAA+TGG | 0.407433 | 7.2:-26989292 | None:intergenic |
| CATGTTCTTCACTTGATGGT+TGG | 0.420616 | 7.2:+26988884 | MS.gene85442:CDS |
| CTACAACACCTTGGATAATA+GGG | 0.420907 | 7.2:-26989266 | None:intergenic |
| AGGCTCTACAAAGAACTTGA+TGG | 0.436345 | 7.2:+26989092 | MS.gene85442:CDS |
| ATCCGGAAAGGATTTCCAAA+TGG | 0.445961 | 7.2:-26988484 | None:intergenic |
| GTTCTTCACTTGATGGTTGG+AGG | 0.446966 | 7.2:+26988887 | MS.gene85442:CDS |
| ATGTGGCTGATGTGTACTCT+TGG | 0.450899 | 7.2:+26989121 | MS.gene85442:CDS |
| GATGGTTGGAGGCAGCATAT+TGG | 0.451764 | 7.2:+26988898 | MS.gene85442:CDS |
| TGCCTTTAGGTGCTATCATC+CGG | 0.456937 | 7.2:-26988501 | None:intergenic |
| TGAGTTATCACGTCTGAAGC+AGG | 0.464721 | 7.2:+26988795 | MS.gene85442:CDS |
| TGACTGACTGGGATGAGAAA+TGG | 0.469637 | 7.2:+26988713 | MS.gene85442:CDS |
| TCCGGAAAGGATTTCCAAAT+GGG | 0.470277 | 7.2:-26988483 | None:intergenic |
| ATGAAGTTGTTAGCTTGTCT+TGG | 0.470881 | 7.2:+26988614 | MS.gene85442:CDS |
| TTGGATGACTTCGGCTATGC+AGG | 0.483092 | 7.2:+26988633 | MS.gene85442:CDS |
| TCTACAGAATCTTGTAAATG+AGG | 0.499811 | 7.2:+26989161 | MS.gene85442:CDS |
| TGTGGCTGATGTGTACTCTT+GGG | 0.507413 | 7.2:+26989122 | MS.gene85442:CDS |
| TAGCTTGTCTTGGATGACTT+CGG | 0.520698 | 7.2:+26988624 | MS.gene85442:CDS |
| TTGCTGTCTAATCTGAGGTC+AGG | 0.523115 | 7.2:+26989426 | MS.gene85442:CDS |
| TTCTCATCCCAGTCAGTCAC+GGG | 0.526212 | 7.2:-26988709 | None:intergenic |
| GATAATACTGACAGCAGTTG+TGG | 0.537176 | 7.2:-26988535 | None:intergenic |
| TTGAGGCAAATTTGGAAGAG+AGG | 0.538254 | 7.2:+26988563 | MS.gene85442:CDS |
| CACGACCAGACAAGACCACT+TGG | 0.539337 | 7.2:-26989398 | None:intergenic |
| AGATCTTCTTACAAAGGAGG+TGG | 0.548875 | 7.2:+26989365 | MS.gene85442:CDS |
| GCGAAGACTGTTGAGAAGCT+AGG | 0.551535 | 7.2:+26989312 | MS.gene85442:CDS |
| ATTCACTGTATTGAACGAGT+TGG | 0.558633 | 7.2:+26989212 | MS.gene85442:CDS |
| ACGTGCATTGAAGTAAAAGA+TGG | 0.571324 | 7.2:-26988819 | None:intergenic |
| CATCAAGTGAAGAACATGCC+CGG | 0.575410 | 7.2:-26988879 | None:intergenic |
| CATCTAAATGAGTCGTCCAC+AGG | 0.578682 | 7.2:+26988441 | None:intergenic |
| TTTCTCATCCCAGTCAGTCA+CGG | 0.580877 | 7.2:-26988710 | None:intergenic |
| AAGCTCAAGGTCTGTCATCA+GGG | 0.582026 | 7.2:-26988686 | None:intergenic |
| GAACTTGATGGATATGGATG+TGG | 0.582073 | 7.2:+26989104 | MS.gene85442:CDS |
| AGCTGTTGATTTGTCTGCGA+GGG | 0.583334 | 7.2:+26989236 | MS.gene85442:CDS |
| GAAAAGCTGATCTGATGAGA+AGG | 0.586785 | 7.2:-26988857 | None:intergenic |
| TTCCGGATGATAGCACCTAA+AGG | 0.589047 | 7.2:+26988499 | MS.gene85442:CDS |
| TGAGCTTCCCGTGACTGACT+GGG | 0.590932 | 7.2:+26988702 | MS.gene85442:CDS |
| CTTCTTACAAAGGAGGTGGA+TGG | 0.595458 | 7.2:+26989369 | MS.gene85442:CDS |
| CAATGGTATCTACAACACCT+TGG | 0.598786 | 7.2:-26989275 | None:intergenic |
| GAAATGGATAGATGTGTACT+TGG | 0.601770 | 7.2:+26988729 | MS.gene85442:CDS |
| AATGATCTGGGTGGATCCTG+TGG | 0.602839 | 7.2:-26988457 | None:intergenic |
| TTAGGTGCTATCATCCGGAA+AGG | 0.602901 | 7.2:-26988496 | None:intergenic |
| GAATTATACCCTATTATCCA+AGG | 0.604461 | 7.2:+26989258 | MS.gene85442:CDS |
| GCAACAGAGAATTTCTCTCA+AGG | 0.606168 | 7.2:+26989339 | MS.gene85442:CDS |
| GCAAGCTATCTATGGAGTGA+AGG | 0.607174 | 7.2:+26989026 | MS.gene85442:CDS |
| AGTCAGTCACGGGAAGCTCA+AGG | 0.612150 | 7.2:-26988699 | None:intergenic |
| AAACCTCACTCCCAAAAGCA+AGG | 0.622520 | 7.2:+26988591 | MS.gene85442:CDS |
| GAGTTATCACGTCTGAAGCA+GGG | 0.623647 | 7.2:+26988796 | MS.gene85442:CDS |
| TGGGTCATCTGATCTTCCAA+AGG | 0.624962 | 7.2:+26988972 | MS.gene85442:CDS |
| AGGACTAGATCTTCTTACAA+AGG | 0.633154 | 7.2:+26989359 | MS.gene85442:CDS |
| AACCTGAGAATTGAAAATTG+TGG | 0.634817 | 7.2:+26988928 | MS.gene85442:CDS |
| ACTAGATCTTCTTACAAAGG+AGG | 0.643357 | 7.2:+26989362 | MS.gene85442:CDS |
| TGTCAATGACCACATCTTAG+GGG | 0.666493 | 7.2:+26989455 | MS.gene85442:CDS |
| TGACCTCAGATTAGACAGCA+AGG | 0.669120 | 7.2:-26989424 | None:intergenic |
| GTCAATGACCACATCTTAGG+GGG | 0.671222 | 7.2:+26989456 | MS.gene85442:CDS |
| ATGCCTTGCTGTCTAATCTG+AGG | 0.680457 | 7.2:+26989421 | MS.gene85442:CDS |
| AAGCTGTTGATTTGTCTGCG+AGG | 0.756834 | 7.2:+26989235 | MS.gene85442:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATCTTGTAAATGAGGAAATT+AGG | + | chr7.2:26989169-26989188 | MS.gene85442:CDS | 25.0% |
| ! | TCTTGTAAATGAGGAAATTA+GGG | + | chr7.2:26989170-26989189 | MS.gene85442:CDS | 25.0% |
| AACCTGAGAATTGAAAATTG+TGG | + | chr7.2:26988928-26988947 | MS.gene85442:CDS | 30.0% | |
| AAGGTTAAAAAGTCAGCAAA+AGG | + | chr7.2:26988991-26989010 | MS.gene85442:CDS | 30.0% | |
| AGGTTAAAAAGTCAGCAAAA+GGG | + | chr7.2:26988992-26989011 | MS.gene85442:CDS | 30.0% | |
| GAATTATACCCTATTATCCA+AGG | + | chr7.2:26989258-26989277 | MS.gene85442:CDS | 30.0% | |
| TCTACAGAATCTTGTAAATG+AGG | + | chr7.2:26989161-26989180 | MS.gene85442:CDS | 30.0% | |
| ! | TACAAAGAACTTGATGGATA+TGG | + | chr7.2:26989098-26989117 | MS.gene85442:CDS | 30.0% |
| ! | TTCTGTAGACCTTTAAAAGT+TGG | - | chr7.2:26989150-26989169 | None:intergenic | 30.0% |
| !! | ATTAGGGTTAGATTTTCAAG+TGG | + | chr7.2:26989186-26989205 | MS.gene85442:CDS | 30.0% |
| !!! | TTAGGGTTAGATTTTCAAGT+GGG | + | chr7.2:26989187-26989206 | MS.gene85442:CDS | 30.0% |
| !!! | TTTGCTGACTTTTTAACCTT+TGG | - | chr7.2:26988991-26989010 | None:intergenic | 30.0% |
| ACGTGCATTGAAGTAAAAGA+TGG | - | chr7.2:26988822-26988841 | None:intergenic | 35.0% | |
| ACTAGATCTTCTTACAAAGG+AGG | + | chr7.2:26989362-26989381 | MS.gene85442:CDS | 35.0% | |
| AGGACTAGATCTTCTTACAA+AGG | + | chr7.2:26989359-26989378 | MS.gene85442:CDS | 35.0% | |
| ATTCACTGTATTGAACGAGT+TGG | + | chr7.2:26989212-26989231 | MS.gene85442:CDS | 35.0% | |
| CCAAATGGGAAAAATGATCT+GGG | - | chr7.2:26988472-26988491 | None:intergenic | 35.0% | |
| CTACAACACCTTGGATAATA+GGG | - | chr7.2:26989269-26989288 | None:intergenic | 35.0% | |
| GAAATGGATAGATGTGTACT+TGG | + | chr7.2:26988729-26988748 | MS.gene85442:CDS | 35.0% | |
| TAAAAAGTCAGCAAAAGGGA+AGG | + | chr7.2:26988996-26989015 | MS.gene85442:CDS | 35.0% | |
| TCCAAATGGGAAAAATGATC+TGG | - | chr7.2:26988473-26988492 | None:intergenic | 35.0% | |
| TCTACAACACCTTGGATAAT+AGG | - | chr7.2:26989270-26989289 | None:intergenic | 35.0% | |
| ! | AACAACTTCATCCTTGCTTT+TGG | - | chr7.2:26988605-26988624 | None:intergenic | 35.0% |
| ! | TGAAAATTGTGGCAGCATTT+TGG | + | chr7.2:26988939-26988958 | MS.gene85442:CDS | 35.0% |
| ! | TGCCACAATTTTCAATTCTC+AGG | - | chr7.2:26988933-26988952 | None:intergenic | 35.0% |
| !! | ACAACTTCATCCTTGCTTTT+GGG | - | chr7.2:26988604-26988623 | None:intergenic | 35.0% |
| !! | ATGAAGTTGTTAGCTTGTCT+TGG | + | chr7.2:26988614-26988633 | MS.gene85442:CDS | 35.0% |
| !! | GTCAGTATTATCTGCTTTTG+AGG | + | chr7.2:26988546-26988565 | MS.gene85442:CDS | 35.0% |
| !! | GTTTTGATGCAAGCTATCTA+TGG | + | chr7.2:26989018-26989037 | MS.gene85442:CDS | 35.0% |
| !!! | ATCTGCTTTTGAGGCAAATT+TGG | + | chr7.2:26988555-26988574 | MS.gene85442:CDS | 35.0% |
| AATGGGAAAAATGATCTGGG+TGG | - | chr7.2:26988469-26988488 | None:intergenic | 40.0% | |
| ACTGTCAATGACCACATCTT+AGG | + | chr7.2:26989453-26989472 | MS.gene85442:CDS | 40.0% | |
| AGATCTTCTTACAAAGGAGG+TGG | + | chr7.2:26989365-26989384 | MS.gene85442:CDS | 40.0% | |
| AGGCTCTACAAAGAACTTGA+TGG | + | chr7.2:26989092-26989111 | MS.gene85442:CDS | 40.0% | |
| ATCCGGAAAGGATTTCCAAA+TGG | - | chr7.2:26988487-26988506 | None:intergenic | 40.0% | |
| CAATGCACGTTGCACAATTT+AGG | + | chr7.2:26988832-26988851 | MS.gene85442:CDS | 40.0% | |
| CAATGGTATCTACAACACCT+TGG | - | chr7.2:26989278-26989297 | None:intergenic | 40.0% | |
| CGCATGTGATTCTGTTTCAA+TGG | - | chr7.2:26989295-26989314 | None:intergenic | 40.0% | |
| CTGTCAATGACCACATCTTA+GGG | + | chr7.2:26989454-26989473 | MS.gene85442:CDS | 40.0% | |
| GAAAAGCTGATCTGATGAGA+AGG | - | chr7.2:26988860-26988879 | None:intergenic | 40.0% | |
| GATAATACTGACAGCAGTTG+TGG | - | chr7.2:26988538-26988557 | None:intergenic | 40.0% | |
| GCAACAGAGAATTTCTCTCA+AGG | + | chr7.2:26989339-26989358 | MS.gene85442:CDS | 40.0% | |
| GGAGATAACTTAGTGCCTTT+AGG | - | chr7.2:26988517-26988536 | None:intergenic | 40.0% | |
| TCCCATTTGGAAATCCTTTC+CGG | + | chr7.2:26988482-26988501 | MS.gene85442:CDS | 40.0% | |
| TCCGGAAAGGATTTCCAAAT+GGG | - | chr7.2:26988486-26988505 | None:intergenic | 40.0% | |
| TGTCAATGACCACATCTTAG+GGG | + | chr7.2:26989455-26989474 | MS.gene85442:CDS | 40.0% | |
| TTGAGGCAAATTTGGAAGAG+AGG | + | chr7.2:26988563-26988582 | MS.gene85442:CDS | 40.0% | |
| ! | AGCATTTTGGATAATCTGGC+TGG | + | chr7.2:26988952-26988971 | MS.gene85442:CDS | 40.0% |
| ! | CATGTTCTTCACTTGATGGT+TGG | + | chr7.2:26988884-26988903 | MS.gene85442:CDS | 40.0% |
| ! | GAACTTGATGGATATGGATG+TGG | + | chr7.2:26989104-26989123 | MS.gene85442:CDS | 40.0% |
| ! | GCATTTTGGATAATCTGGCT+GGG | + | chr7.2:26988953-26988972 | MS.gene85442:CDS | 40.0% |
| ! | TAGCTTGTCTTGGATGACTT+CGG | + | chr7.2:26988624-26988643 | MS.gene85442:CDS | 40.0% |
| ! | TCTCATCAGATCAGCTTTTC+CGG | + | chr7.2:26988860-26988879 | MS.gene85442:CDS | 40.0% |
| ! | TCTTGGGCTCCAACTTTTAA+AGG | + | chr7.2:26989138-26989157 | MS.gene85442:CDS | 40.0% |
| ! | TGGCAGCATTTTGGATAATC+TGG | + | chr7.2:26988948-26988967 | MS.gene85442:CDS | 40.0% |
| !! | CCCAGATCATTTTTCCCATT+TGG | + | chr7.2:26988469-26988488 | MS.gene85442:CDS | 40.0% |
| !!! | GTGTTTGCTACTGCTTTTTC+AGG | + | chr7.2:26989072-26989091 | MS.gene85442:CDS | 40.0% |
| !!! | TTTTTCCAAGTGGTCTTGTC+TGG | + | chr7.2:26989393-26989412 | MS.gene85442:CDS | 40.0% |
| AAACCTCACTCCCAAAAGCA+AGG | + | chr7.2:26988591-26988610 | MS.gene85442:CDS | 45.0% | |
| AAGCTCAAGGTCTGTCATCA+GGG | - | chr7.2:26988689-26988708 | None:intergenic | 45.0% | |
| ATGTGGCTGATGTGTACTCT+TGG | + | chr7.2:26989121-26989140 | MS.gene85442:CDS | 45.0% | |
| CATCAAGTGAAGAACATGCC+CGG | - | chr7.2:26988882-26988901 | None:intergenic | 45.0% | |
| CTTCTTACAAAGGAGGTGGA+TGG | + | chr7.2:26989369-26989388 | MS.gene85442:CDS | 45.0% | |
| CTTTGTTACCCCCTAAGATG+TGG | - | chr7.2:26989467-26989486 | None:intergenic | 45.0% | |
| GCAAGCTATCTATGGAGTGA+AGG | + | chr7.2:26989026-26989045 | MS.gene85442:CDS | 45.0% | |
| GTCAATGACCACATCTTAGG+GGG | + | chr7.2:26989456-26989475 | MS.gene85442:CDS | 45.0% | |
| TGACCTCAGATTAGACAGCA+AGG | - | chr7.2:26989427-26989446 | None:intergenic | 45.0% | |
| TGACTGACTGGGATGAGAAA+TGG | + | chr7.2:26988713-26988732 | MS.gene85442:CDS | 45.0% | |
| TGGGTCATCTGATCTTCCAA+AGG | + | chr7.2:26988972-26988991 | MS.gene85442:CDS | 45.0% | |
| TGTGGCTGATGTGTACTCTT+GGG | + | chr7.2:26989122-26989141 | MS.gene85442:CDS | 45.0% | |
| TTCCGGATGATAGCACCTAA+AGG | + | chr7.2:26988499-26988518 | MS.gene85442:CDS | 45.0% | |
| TTTCTCATCCCAGTCAGTCA+CGG | - | chr7.2:26988713-26988732 | None:intergenic | 45.0% | |
| ! | ATGCCTTGCTGTCTAATCTG+AGG | + | chr7.2:26989421-26989440 | MS.gene85442:CDS | 45.0% |
| ! | CTCATCAGATCAGCTTTTCC+GGG | + | chr7.2:26988861-26988880 | MS.gene85442:CDS | 45.0% |
| ! | GAGTTATCACGTCTGAAGCA+GGG | + | chr7.2:26988796-26988815 | MS.gene85442:CDS | 45.0% |
| ! | GTTCTTCACTTGATGGTTGG+AGG | + | chr7.2:26988887-26988906 | MS.gene85442:CDS | 45.0% |
| ! | TGAGTTATCACGTCTGAAGC+AGG | + | chr7.2:26988795-26988814 | MS.gene85442:CDS | 45.0% |
| ! | TGCCTTTAGGTGCTATCATC+CGG | - | chr7.2:26988504-26988523 | None:intergenic | 45.0% |
| ! | TTAGGTGCTATCATCCGGAA+AGG | - | chr7.2:26988499-26988518 | None:intergenic | 45.0% |
| ! | TTGCTGTCTAATCTGAGGTC+AGG | + | chr7.2:26989426-26989445 | MS.gene85442:CDS | 45.0% |
| !! | AAGCTGTTGATTTGTCTGCG+AGG | + | chr7.2:26989235-26989254 | MS.gene85442:CDS | 45.0% |
| !! | AGCTGTTGATTTGTCTGCGA+GGG | + | chr7.2:26989236-26989255 | MS.gene85442:CDS | 45.0% |
| AATGATCTGGGTGGATCCTG+TGG | - | chr7.2:26988460-26988479 | None:intergenic | 50.0% | |
| CGGGCATGTTCTTCACTTGA+TGG | + | chr7.2:26988880-26988899 | MS.gene85442:CDS | 50.0% | |
| GAAGCTCAAGGTCTGTCATC+AGG | - | chr7.2:26988690-26988709 | None:intergenic | 50.0% | |
| GATGGTTGGAGGCAGCATAT+TGG | + | chr7.2:26988898-26988917 | MS.gene85442:CDS | 50.0% | |
| GCGAAGACTGTTGAGAAGCT+AGG | + | chr7.2:26989312-26989331 | MS.gene85442:CDS | 50.0% | |
| TTCTCATCCCAGTCAGTCAC+GGG | - | chr7.2:26988712-26988731 | None:intergenic | 50.0% | |
| TTGGATGACTTCGGCTATGC+AGG | + | chr7.2:26988633-26988652 | MS.gene85442:CDS | 50.0% | |
| !! | CATCCTTGCTTTTGGGAGTG+AGG | - | chr7.2:26988597-26988616 | None:intergenic | 50.0% |
| !! | GGTGGATGGCTTTTTCCAAG+TGG | + | chr7.2:26989383-26989402 | MS.gene85442:CDS | 50.0% |
| AGTCAGTCACGGGAAGCTCA+AGG | - | chr7.2:26988702-26988721 | None:intergenic | 55.0% | |
| CACGACCAGACAAGACCACT+TGG | - | chr7.2:26989401-26989420 | None:intergenic | 55.0% | |
| TGAGCTTCCCGTGACTGACT+GGG | + | chr7.2:26988702-26988721 | MS.gene85442:CDS | 55.0% | |
| TTGAGCTTCCCGTGACTGAC+TGG | + | chr7.2:26988701-26988720 | MS.gene85442:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 26988448 | 26989506 | 26988448 | ID=MS.gene85442 |
| chr7.2 | mRNA | 26988448 | 26989506 | 26988448 | ID=MS.gene85442.t1;Parent=MS.gene85442 |
| chr7.2 | exon | 26988448 | 26989506 | 26988448 | ID=MS.gene85442.t1.exon1;Parent=MS.gene85442.t1 |
| chr7.2 | CDS | 26988448 | 26989506 | 26988448 | ID=cds.MS.gene85442.t1;Parent=MS.gene85442.t1 |
| Gene Sequence |
| Protein sequence |
