Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85964.t1 | XP_013444605.1 | 92.3 | 828 | 11 | 2 | 1 | 775 | 98 | 925 | 0.00E+00 | 1437.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85964.t1 | Q9ZPY7 | 64.7 | 830 | 237 | 4 | 1 | 776 | 102 | 929 | 1.3e-308 | 1060.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85964.t1 | A0A072TYK3 | 92.3 | 828 | 11 | 2 | 1 | 775 | 98 | 925 | 0.0e+00 | 1437.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052309 | MS.gene85964 | 0.82933 | 5.47E-55 | -1.69E-46 |
| MS.gene059350 | MS.gene85964 | 0.821102 | 4.83E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85964.t1 | MTR_8g027450 | 92.159 | 829 | 12 | 2 | 1 | 776 | 98 | 926 | 0.0 | 1509 |
| MS.gene85964.t1 | MTR_6g051660 | 69.243 | 634 | 140 | 4 | 1 | 579 | 98 | 731 | 0.0 | 832 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85964.t1 | AT2G46520 | 65.181 | 830 | 233 | 4 | 1 | 776 | 102 | 929 | 0.0 | 1120 |
Find 194 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAATGAGGAGGAGTTTA+AGG | 0.075617 | 8.3:-67144897 | MS.gene85964:CDS |
| GATATTCAGTTCACTGTTTC+TGG | 0.091376 | 8.3:-67143387 | MS.gene85964:CDS |
| CGCCACCGGGTTTGCATTAA+AGG | 0.121487 | 8.3:+67144496 | None:intergenic |
| CGCCTTATGTTTCTCACATT+TGG | 0.169130 | 8.3:-67143469 | MS.gene85964:CDS |
| CTTGCTGTGTGGACTTTGTT+AGG | 0.222365 | 8.3:-67144854 | MS.gene85964:CDS |
| CAAGGATTGTGCGATATATT+TGG | 0.232980 | 8.3:-67144462 | MS.gene85964:CDS |
| CCGAATCTTAAGCTGATTAC+TGG | 0.249866 | 8.3:-67143278 | MS.gene85964:CDS |
| TTGTGAGTCTCCAGTACTTC+TGG | 0.252989 | 8.3:-67143210 | MS.gene85964:CDS |
| ATCCTGCAGCTTCTGCATCC+TGG | 0.258895 | 8.3:-67143187 | MS.gene85964:CDS |
| TGAGAATATTAATCTTTATA+TGG | 0.266958 | 8.3:-67144921 | MS.gene85964:CDS |
| TTCTGCATCCTGGGGTAAAA+TGG | 0.284025 | 8.3:-67143177 | MS.gene85964:CDS |
| CAGCTTTGTGCACAGTTCCC+TGG | 0.284744 | 8.3:-67142964 | MS.gene85964:CDS |
| CGAATTTGCATTGAGGGGTT+GGG | 0.285078 | 8.3:-67143979 | MS.gene85964:CDS |
| TTCAGACTCTGGGAGCTTAA+AGG | 0.289130 | 8.3:+67144071 | None:intergenic |
| GCCTTATGTTTCTCACATTT+GGG | 0.308273 | 8.3:-67143468 | MS.gene85964:CDS |
| TCCCCTTGGCTGATCTCATT+TGG | 0.319827 | 8.3:+67143608 | None:intergenic |
| AGAAGCGAGGGCCATGATTT+GGG | 0.321584 | 8.3:+67145391 | None:intergenic |
| TTGCTCTTGTGGATGAGCTT+AGG | 0.321661 | 8.3:-67144955 | MS.gene85964:CDS |
| TGAATCATATTGAGTATATT+AGG | 0.323794 | 8.3:-67144649 | MS.gene85964:CDS |
| TCCTGCAGCTTCTGCATCCT+GGG | 0.325044 | 8.3:-67143186 | MS.gene85964:CDS |
| TTCATCAGCATTGAGAAAAC+TGG | 0.336053 | 8.3:+67144108 | None:intergenic |
| AAGAAGCGAGGGCCATGATT+TGG | 0.336122 | 8.3:+67145390 | None:intergenic |
| ATGCAAACCCGGTGGCGAAT+TGG | 0.341622 | 8.3:-67144490 | MS.gene85964:CDS |
| AAAAGCGGTTTAAGAGTTTC+CGG | 0.343454 | 8.3:+67145130 | None:intergenic |
| TTCCCGGGGATCATTATATC+TGG | 0.347778 | 8.3:+67143008 | None:intergenic |
| AGTCACAGAAATTGTGTTGT+AGG | 0.352604 | 8.3:-67145105 | MS.gene85964:CDS |
| ATCATGGCCCTCGCTTCTTC+CGG | 0.357089 | 8.3:-67145386 | MS.gene85964:CDS |
| GATTGCTTGTGAGTTGCTTA+AGG | 0.364735 | 8.3:-67144588 | MS.gene85964:CDS |
| AGCTTTGTGCACAGTTCCCT+GGG | 0.366805 | 8.3:-67142963 | MS.gene85964:CDS |
| GTATTGTGACACTTCTTTCT+CGG | 0.370722 | 8.3:-67143148 | MS.gene85964:CDS |
| CTACTGACTCAAACAGATAA+TGG | 0.371221 | 8.3:+67143908 | None:intergenic |
| TCGTGACCAGCTTGCGGTTA+CGG | 0.373029 | 8.3:-67144810 | MS.gene85964:CDS |
| AAATGTATTATGAGGGTTCT+TGG | 0.376293 | 8.3:-67144030 | MS.gene85964:CDS |
| ACCATTGATTGAAGCGTAAT+CGG | 0.377577 | 8.3:+67145327 | None:intergenic |
| TGCTCTTGTGGATGAGCTTA+GGG | 0.378445 | 8.3:-67144954 | MS.gene85964:CDS |
| TGAGTATATTAGGAGGGATA+TGG | 0.381340 | 8.3:-67144639 | MS.gene85964:CDS |
| TCGAATTTGCATTGAGGGGT+TGG | 0.382244 | 8.3:-67143980 | MS.gene85964:CDS |
| AAGGGGATTGCTACGCGTTA+TGG | 0.383164 | 8.3:-67144569 | MS.gene85964:CDS |
| GCTTTACTGTCCGCCTTCTC+TGG | 0.384838 | 8.3:+67143426 | None:intergenic |
| TGAAGACTAGCAACAAGTTC+CGG | 0.387862 | 8.3:+67145367 | None:intergenic |
| AAAATCGCACTAAATATATC+AGG | 0.393109 | 8.3:+67143317 | None:intergenic |
| CAGGGAACTGTGCACAAAGC+TGG | 0.393904 | 8.3:+67142965 | None:intergenic |
| GATTATACCGCAGATTTGTC+AGG | 0.398128 | 8.3:-67144726 | MS.gene85964:CDS |
| TGCTGATGGTCTTGCTCTTG+TGG | 0.398506 | 8.3:-67144966 | MS.gene85964:CDS |
| CTTGTTGCTAGTCTTCAAAA+AGG | 0.400301 | 8.3:-67145361 | MS.gene85964:CDS |
| CATAGTTTGTTTGCGGCCGA+TGG | 0.405046 | 8.3:-67144749 | MS.gene85964:CDS |
| TCCGATTACGCTTCAATCAA+TGG | 0.406354 | 8.3:-67145328 | MS.gene85964:CDS |
| GCAAGGAAACGAACCAAATC+AGG | 0.407252 | 8.3:+67144237 | None:intergenic |
| ATGAATGGATGGGTGAGTTT+AGG | 0.409263 | 8.3:-67145027 | MS.gene85964:CDS |
| TGCCCTGGTGCGTCTACTCC+AGG | 0.410838 | 8.3:-67143648 | MS.gene85964:CDS |
| GCTTGATTTGAAGTATTGTT+TGG | 0.411121 | 8.3:-67145239 | MS.gene85964:CDS |
| ATGTTATGAAATGTATTATG+AGG | 0.413049 | 8.3:-67144038 | MS.gene85964:CDS |
| TTGCTGTGTGGACTTTGTTA+GGG | 0.413943 | 8.3:-67144853 | MS.gene85964:CDS |
| TCTGCAATATCTGGCATGTC+AGG | 0.421184 | 8.3:+67143098 | None:intergenic |
| TAAGATTCGGAATCCAGAAC+TGG | 0.422640 | 8.3:+67143291 | None:intergenic |
| TCCTCCCTCAACCTCACATT+CGG | 0.426403 | 8.3:+67144692 | None:intergenic |
| TCTCTTGAGGGGAGTGCTGA+TGG | 0.427391 | 8.3:-67144980 | MS.gene85964:CDS |
| GTCAAATATGCCAAGTACTT+TGG | 0.431949 | 8.3:+67143577 | None:intergenic |
| GCTAGTTATCCTTCTCTTGA+GGG | 0.441696 | 8.3:-67144992 | MS.gene85964:CDS |
| ATTGCTTGTGAGTTGCTTAA+GGG | 0.442178 | 8.3:-67144587 | MS.gene85964:CDS |
| GCTGCAGGATCCAGAAGTAC+TGG | 0.443966 | 8.3:+67143200 | None:intergenic |
| CGTGATTCCCGATGATAGCT+AGG | 0.445613 | 8.3:+67145419 | None:intergenic |
| TCCTTCCAGCATTGTAAAGT+TGG | 0.446082 | 8.3:+67143048 | None:intergenic |
| TTGTCCTTCCAATTCGCCAC+CGG | 0.447945 | 8.3:+67144482 | None:intergenic |
| GGTTTAAGAGTTTCCGGTGG+TGG | 0.454599 | 8.3:+67145136 | None:intergenic |
| TTCGTCCAACTTTACAATGC+TGG | 0.457686 | 8.3:-67143053 | MS.gene85964:CDS |
| GAATTTGCATTGAGGGGTTG+GGG | 0.459250 | 8.3:-67143978 | MS.gene85964:CDS |
| TGTCCTTCCAATTCGCCACC+GGG | 0.461059 | 8.3:+67144483 | None:intergenic |
| CCCGATGATAGCTAGGGCTT+CGG | 0.461908 | 8.3:+67145426 | None:intergenic |
| GGGCTTCGGAGAGCTGAGAT+TGG | 0.462047 | 8.3:+67145440 | None:intergenic |
| TTATTTCAAGCCGAGGGAAA+AGG | 0.463307 | 8.3:+67143824 | None:intergenic |
| TACTGATTCTCTTCAGACTC+TGG | 0.463688 | 8.3:+67144060 | None:intergenic |
| AGAGTTTCCGGTGGTGGTGG+CGG | 0.465943 | 8.3:+67145142 | None:intergenic |
| TGCTAGTTATCCTTCTCTTG+AGG | 0.466758 | 8.3:-67144993 | MS.gene85964:CDS |
| TTGAGGATCATATGAATGAA+TGG | 0.467479 | 8.3:-67145042 | MS.gene85964:CDS |
| CCAGTAATCAGCTTAAGATT+CGG | 0.472206 | 8.3:+67143278 | None:intergenic |
| TTTCTCGGCAAGAACAAGAC+AGG | 0.475623 | 8.3:-67143133 | MS.gene85964:CDS |
| TGTTCATCATAGTTTGTTTG+CGG | 0.478214 | 8.3:-67144756 | MS.gene85964:CDS |
| TAGTAAAGGACGAGGGTGGC+AGG | 0.478712 | 8.3:-67144158 | MS.gene85964:CDS |
| TCTACAAAGAAGGCTGCAAC+CGG | 0.487821 | 8.3:-67144428 | MS.gene85964:intron |
| AGTAGCCGGTCTTGTGAAGC+GGG | 0.488425 | 8.3:-67143890 | MS.gene85964:CDS |
| CTCAAACAGATAATGGTTGA+AGG | 0.488910 | 8.3:+67143915 | None:intergenic |
| AGTGCACCTGCCTTAAGCAT+TGG | 0.489711 | 8.3:+67144318 | None:intergenic |
| GTTGCTCGAATTTGCATTGA+GGG | 0.490878 | 8.3:-67143985 | MS.gene85964:CDS |
| AAGCGCAAGTGTTCCTGCCC+TGG | 0.493681 | 8.3:-67143663 | MS.gene85964:CDS |
| TGGAGTAGACGCACCAGGGC+AGG | 0.497359 | 8.3:+67143650 | None:intergenic |
| TTAAGAGTTTCCGGTGGTGG+TGG | 0.501267 | 8.3:+67145139 | None:intergenic |
| CTTTGGTCAGTCTATCCCCT+TGG | 0.503293 | 8.3:+67143594 | None:intergenic |
| ATCACGATTTCCCCAAATCA+TGG | 0.503511 | 8.3:-67145402 | MS.gene85964:CDS |
| TGGAGACTCACAAATGAGTC+TGG | 0.504113 | 8.3:+67143220 | None:intergenic |
| GAATGAGTATCCAATGCTTA+AGG | 0.506930 | 8.3:-67144328 | MS.gene85964:CDS |
| TGAGAAACTCTTAATAGTAA+AGG | 0.508710 | 8.3:-67144172 | MS.gene85964:CDS |
| AGGGAACTGTGCACAAAGCT+GGG | 0.510033 | 8.3:+67142966 | None:intergenic |
| GCATCAAGCACTTCTGATCA+AGG | 0.510248 | 8.3:-67143542 | MS.gene85964:CDS |
| GAGGGTGGCAGGCTACGTTA+TGG | 0.511357 | 8.3:-67144147 | MS.gene85964:CDS |
| TGTGGATGAGCTTAGGGCTG+CGG | 0.511547 | 8.3:-67144948 | MS.gene85964:CDS |
| AGGCCTGGAGTAGACGCACC+AGG | 0.520181 | 8.3:+67143645 | None:intergenic |
| ACAGATAATGGTTGAAGGTG+GGG | 0.520696 | 8.3:+67143920 | None:intergenic |
| ATGACTTGAGGGAACCTCCC+AGG | 0.521093 | 8.3:+67142946 | None:intergenic |
| CCAGATATTGCAGAAAATGT+AGG | 0.524692 | 8.3:-67143089 | MS.gene85964:CDS |
| CATTTGCAGTGATGACTTGA+GGG | 0.527183 | 8.3:+67142935 | None:intergenic |
| CCGAAGCCCTAGCTATCATC+GGG | 0.527980 | 8.3:-67145426 | MS.gene85964:CDS |
| CCCCAGGATGCAGAAGCTGC+AGG | 0.528376 | 8.3:+67143185 | None:intergenic |
| TCCGAAGCCCTAGCTATCAT+CGG | 0.530404 | 8.3:-67145427 | MS.gene85964:CDS |
| ACAGCAGCCGCCACCACCAC+CGG | 0.532576 | 8.3:-67145149 | MS.gene85964:CDS |
| ACTCCAGGCCTTCCTTCAAA+AGG | 0.538342 | 8.3:-67143633 | MS.gene85964:CDS |
| TCACTGTTTCTGGTTAAGCA+TGG | 0.538604 | 8.3:-67143377 | MS.gene85964:CDS |
| AACAGATAATGGTTGAAGGT+GGG | 0.538694 | 8.3:+67143919 | None:intergenic |
| GGTCTCTCTTTCTACAAAGA+AGG | 0.540099 | 8.3:-67144438 | MS.gene85964:CDS |
| ATAGTTTGTTTGCGGCCGAT+GGG | 0.540550 | 8.3:-67144748 | MS.gene85964:CDS |
| TCTTTATATGGAGAAGAATG+AGG | 0.540847 | 8.3:-67144909 | MS.gene85964:CDS |
| GATAGACTGACCAAAGTACT+TGG | 0.541303 | 8.3:-67143587 | MS.gene85964:CDS |
| GCCCAAATGTGAGAAACATA+AGG | 0.547648 | 8.3:+67143467 | None:intergenic |
| GGATCATATGAATGAATGGA+TGG | 0.549813 | 8.3:-67145038 | MS.gene85964:CDS |
| ACATTTGCAGTGATGACTTG+AGG | 0.556182 | 8.3:+67142934 | None:intergenic |
| TGTTATGAAATGTATTATGA+GGG | 0.556990 | 8.3:-67144037 | MS.gene85964:CDS |
| TTGCTTGTGAGTTGCTTAAG+GGG | 0.562415 | 8.3:-67144586 | MS.gene85964:CDS |
| CAGTAGCCGGTCTTGTGAAG+CGG | 0.563321 | 8.3:-67143891 | MS.gene85964:CDS |
| TGATTCCGAATGTGAGGTTG+AGG | 0.563458 | 8.3:-67144697 | MS.gene85964:CDS |
| CGGGGATCATTATATCTGGA+AGG | 0.565218 | 8.3:+67143012 | None:intergenic |
| TGTGAAGCGGGCTTCTGAGA+GGG | 0.568121 | 8.3:-67143878 | MS.gene85964:CDS |
| CTTCCAGATATAATGATCCC+CGG | 0.568563 | 8.3:-67143011 | MS.gene85964:CDS |
| ACTGATTCTCTTCAGACTCT+GGG | 0.573743 | 8.3:+67144061 | None:intergenic |
| GAGTATCCAATGCTTAAGGC+AGG | 0.575297 | 8.3:-67144324 | MS.gene85964:CDS |
| CTAGTTATCCTTCTCTTGAG+GGG | 0.575908 | 8.3:-67144991 | MS.gene85964:CDS |
| TATCTGTTTGAGTCAGTAGC+CGG | 0.575956 | 8.3:-67143904 | MS.gene85964:CDS |
| AGAACAAGACAGGGTTGAGG+AGG | 0.576975 | 8.3:-67143123 | MS.gene85964:CDS |
| ATTATACCGCAGATTTGTCA+GGG | 0.577085 | 8.3:-67144725 | MS.gene85964:CDS |
| TCGCACTAAATATATCAGGC+TGG | 0.577096 | 8.3:+67143321 | None:intergenic |
| GGATTGTGCGATATATTTGG+TGG | 0.577400 | 8.3:-67144459 | MS.gene85964:CDS |
| TATCAAAAGAAGTAGCATTG+AGG | 0.583401 | 8.3:-67144266 | MS.gene85964:CDS |
| AGAAGCCCGCTTCACAAGAC+CGG | 0.584077 | 8.3:+67143885 | None:intergenic |
| ATCATATTGAGTATATTAGG+AGG | 0.584593 | 8.3:-67144646 | MS.gene85964:CDS |
| AATTTCTGTGACTCGAAAAG+CGG | 0.584834 | 8.3:+67145115 | None:intergenic |
| GAAGCGAGGGCCATGATTTG+GGG | 0.585140 | 8.3:+67145392 | None:intergenic |
| TTCCAGATATAATGATCCCC+GGG | 0.585346 | 8.3:-67143010 | MS.gene85964:CDS |
| GACAGTATTATTTCAAGCCG+AGG | 0.585780 | 8.3:+67143817 | None:intergenic |
| TTTGGTTCGTTTCCTTGCTG+CGG | 0.587294 | 8.3:-67144232 | MS.gene85964:CDS |
| CGCGTCGTTGATTGACGCTG+CGG | 0.589913 | 8.3:-67145176 | MS.gene85964:CDS |
| GAGGTTGAGGGAGGATGATG+AGG | 0.591211 | 8.3:-67144684 | MS.gene85964:CDS |
| TGCATCCTGGGGTAAAATGG+TGG | 0.591851 | 8.3:-67143174 | MS.gene85964:CDS |
| TAATTGCCGTAACCGCAAGC+TGG | 0.592087 | 8.3:+67144804 | None:intergenic |
| TCAGCACTCCCCTCAAGAGA+AGG | 0.592983 | 8.3:+67144983 | None:intergenic |
| AAACAGATAATGGTTGAAGG+TGG | 0.595794 | 8.3:+67143918 | None:intergenic |
| TGACTTGAGGGAACCTCCCA+GGG | 0.597802 | 8.3:+67142947 | None:intergenic |
| AACAAGTTCCGGAAGAAGCG+AGG | 0.599510 | 8.3:+67145378 | None:intergenic |
| GGGGATCATTATATCTGGAA+GGG | 0.600838 | 8.3:+67143013 | None:intergenic |
| GGGATCATTATATCTGGAAG+GGG | 0.602819 | 8.3:+67143014 | None:intergenic |
| AAGCTCCTTTAATGCAAACC+CGG | 0.603899 | 8.3:-67144501 | MS.gene85964:CDS |
| ACAAGTTCCGGAAGAAGCGA+GGG | 0.604193 | 8.3:+67145379 | None:intergenic |
| TTAGAGAGCTCCAGAGAAGG+CGG | 0.607962 | 8.3:-67143436 | MS.gene85964:CDS |
| TTCTCGGCAAGAACAAGACA+GGG | 0.608184 | 8.3:-67143132 | MS.gene85964:CDS |
| TCATATTGAGTATATTAGGA+GGG | 0.608345 | 8.3:-67144645 | MS.gene85964:CDS |
| GCACCAAATGAGATCAGCCA+AGG | 0.608644 | 8.3:-67143611 | MS.gene85964:CDS |
| TATATTAGGAGGGATATGGA+AGG | 0.611021 | 8.3:-67144635 | MS.gene85964:CDS |
| TTGTGAAGCGGGCTTCTGAG+AGG | 0.615980 | 8.3:-67143879 | MS.gene85964:CDS |
| TGTTGCTCGAATTTGCATTG+AGG | 0.616016 | 8.3:-67143986 | MS.gene85964:CDS |
| ACTAAATATATCAGGCTGGA+CGG | 0.616909 | 8.3:+67143325 | None:intergenic |
| ACTCTTAATAGTAAAGGACG+AGG | 0.618274 | 8.3:-67144166 | MS.gene85964:CDS |
| GTGATCTTGATACAAGGAGG+AGG | 0.620319 | 8.3:-67144610 | MS.gene85964:CDS |
| GATTCCGAATGTGAGGTTGA+GGG | 0.620733 | 8.3:-67144696 | MS.gene85964:CDS |
| ACAGTATTATTTCAAGCCGA+GGG | 0.621118 | 8.3:+67143818 | None:intergenic |
| CACCAAATGAGATCAGCCAA+GGG | 0.623350 | 8.3:-67143610 | MS.gene85964:CDS |
| ATTGTAAAGTTGGACGAAGG+TGG | 0.623656 | 8.3:+67143058 | None:intergenic |
| TTTGTGCACAGTTCCCTGGG+AGG | 0.632283 | 8.3:-67142960 | MS.gene85964:CDS |
| TCCAACTTTACAATGCTGGA+AGG | 0.632984 | 8.3:-67143049 | MS.gene85964:CDS |
| AAACCCGGTGGCGAATTGGA+AGG | 0.633015 | 8.3:-67144486 | MS.gene85964:CDS |
| CCTGCAGCTTCTGCATCCTG+GGG | 0.635126 | 8.3:-67143185 | MS.gene85964:CDS |
| AAGGTAGTGATCTTGATACA+AGG | 0.638914 | 8.3:-67144616 | MS.gene85964:CDS |
| GTGATTCCCGATGATAGCTA+GGG | 0.638935 | 8.3:+67145420 | None:intergenic |
| GACTAGTCGTGACCAGCTTG+CGG | 0.643562 | 8.3:-67144816 | MS.gene85964:CDS |
| AAGATTCGGAATCCAGAACT+GGG | 0.643798 | 8.3:+67143292 | None:intergenic |
| TTGCTCGAATTTGCATTGAG+GGG | 0.644156 | 8.3:-67143984 | MS.gene85964:CDS |
| GCAAGAACAAGACAGGGTTG+AGG | 0.647585 | 8.3:-67143126 | MS.gene85964:CDS |
| CAACATTTGACTCCGCAGCA+AGG | 0.650912 | 8.3:+67144220 | None:intergenic |
| TTATATGGAGAAGAATGAGG+AGG | 0.657740 | 8.3:-67144906 | MS.gene85964:CDS |
| TGAATATCAAGAGAGACTTG+AGG | 0.658051 | 8.3:+67143402 | None:intergenic |
| GATCATATGAATGAATGGAT+GGG | 0.659145 | 8.3:-67145037 | MS.gene85964:CDS |
| AATCTGCGGTATAATCCCAT+CGG | 0.662771 | 8.3:+67144733 | None:intergenic |
| AGCATTGTAAAGTTGGACGA+AGG | 0.671018 | 8.3:+67143055 | None:intergenic |
| GGCCTGGAGTAGACGCACCA+GGG | 0.671962 | 8.3:+67143646 | None:intergenic |
| TTATACCGCAGATTTGTCAG+GGG | 0.685030 | 8.3:-67144724 | MS.gene85964:CDS |
| TTAATAGTAAAGGACGAGGG+TGG | 0.686705 | 8.3:-67144162 | MS.gene85964:CDS |
| GGATTGTGATTCCGAATGTG+AGG | 0.687428 | 8.3:-67144703 | MS.gene85964:CDS |
| CTCCTTTAATGCAAACCCGG+TGG | 0.691872 | 8.3:-67144498 | MS.gene85964:CDS |
| CGCAGCGTCAATCAACGACG+CGG | 0.696713 | 8.3:+67145177 | None:intergenic |
| TCCGAATGTGAGGTTGAGGG+AGG | 0.708339 | 8.3:-67144693 | MS.gene85964:CDS |
| ACAATCCCCTGACAAATCTG+CGG | 0.710797 | 8.3:+67144719 | None:intergenic |
| GTAGTGATCTTGATACAAGG+AGG | 0.711592 | 8.3:-67144613 | MS.gene85964:CDS |
| CTCTTAATAGTAAAGGACGA+GGG | 0.713370 | 8.3:-67144165 | MS.gene85964:CDS |
| ACCAAATGAGATCAGCCAAG+GGG | 0.717940 | 8.3:-67143609 | MS.gene85964:CDS |
| GGATCATTATATCTGGAAGG+GGG | 0.720620 | 8.3:+67143015 | None:intergenic |
| GGTGGCGAATTGGAAGGACA+AGG | 0.722542 | 8.3:-67144480 | MS.gene85964:CDS |
| AGCGGTTTAAGAGTTTCCGG+TGG | 0.723807 | 8.3:+67145133 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAGAATATTAATCTTTATA+TGG | - | chr8.3:67143465-67143484 | MS.gene85964:CDS | 15.0% |
| !! | ATGTTATGAAATGTATTATG+AGG | - | chr8.3:67144348-67144367 | MS.gene85964:intron | 20.0% |
| !! | TGAATCATATTGAGTATATT+AGG | - | chr8.3:67143737-67143756 | MS.gene85964:intron | 20.0% |
| !! | TGTTATGAAATGTATTATGA+GGG | - | chr8.3:67144349-67144368 | MS.gene85964:intron | 20.0% |
| ! | AAAATCGCACTAAATATATC+AGG | + | chr8.3:67145072-67145091 | None:intergenic | 25.0% |
| ! | ATCATATTGAGTATATTAGG+AGG | - | chr8.3:67143740-67143759 | MS.gene85964:intron | 25.0% |
| ! | ATGAAGAAACAAAAAATTCC+CGG | + | chr8.3:67145397-67145416 | None:intergenic | 25.0% |
| ! | GAAAAATTCAGTTACATCAT+TGG | + | chr8.3:67144594-67144613 | None:intergenic | 25.0% |
| ! | TCATATTGAGTATATTAGGA+GGG | - | chr8.3:67143741-67143760 | MS.gene85964:intron | 25.0% |
| ! | TGAGAAACTCTTAATAGTAA+AGG | - | chr8.3:67144214-67144233 | MS.gene85964:CDS | 25.0% |
| ! | TTTCTTAAAAATCGAATTCG+CGG | + | chr8.3:67143095-67143114 | None:intergenic | 25.0% |
| !!! | CTTCTTTTGATATTTGAGAT+CGG | + | chr8.3:67144112-67144131 | None:intergenic | 25.0% |
| !!! | GGAATTTTTTGTTTCTTCAT+TGG | - | chr8.3:67145397-67145416 | MS.gene85964:CDS | 25.0% |
| AAATGTATTATGAGGGTTCT+TGG | - | chr8.3:67144356-67144375 | MS.gene85964:intron | 30.0% | |
| ATATGATCCTCAAAAAACTC+AGG | + | chr8.3:67143337-67143356 | None:intergenic | 30.0% | |
| GATCATATGAATGAATGGAT+GGG | - | chr8.3:67143349-67143368 | MS.gene85964:CDS | 30.0% | |
| TATCAAAAGAAGTAGCATTG+AGG | - | chr8.3:67144120-67144139 | MS.gene85964:CDS | 30.0% | |
| TCAAATATCTGCATGTAGAT+TGG | + | chr8.3:67144673-67144692 | None:intergenic | 30.0% | |
| TCTTTATATGGAGAAGAATG+AGG | - | chr8.3:67143477-67143496 | MS.gene85964:CDS | 30.0% | |
| TGAAGAAACAAAAAATTCCC+GGG | + | chr8.3:67145396-67145415 | None:intergenic | 30.0% | |
| TTGAGAAAAATCTCAAGCAA+AGG | + | chr8.3:67143187-67143206 | None:intergenic | 30.0% | |
| TTGAGGATCATATGAATGAA+TGG | - | chr8.3:67143344-67143363 | MS.gene85964:CDS | 30.0% | |
| ! | ATTGAGGTTTTTACCTGATT+TGG | - | chr8.3:67144136-67144155 | MS.gene85964:CDS | 30.0% |
| !! | GCTTGATTTGAAGTATTGTT+TGG | - | chr8.3:67143147-67143166 | MS.gene85964:CDS | 30.0% |
| !! | TGTTCATCATAGTTTGTTTG+CGG | - | chr8.3:67143630-67143649 | MS.gene85964:CDS | 30.0% |
| AAAAGCGGTTTAAGAGTTTC+CGG | + | chr8.3:67143259-67143278 | None:intergenic | 35.0% | |
| AAGGTAGTGATCTTGATACA+AGG | - | chr8.3:67143770-67143789 | MS.gene85964:intron | 35.0% | |
| AATATCTGCATGTAGATTGG+TGG | + | chr8.3:67144670-67144689 | None:intergenic | 35.0% | |
| AATTTCTGTGACTCGAAAAG+CGG | + | chr8.3:67143274-67143293 | None:intergenic | 35.0% | |
| ACAGTATTATTTCAAGCCGA+GGG | + | chr8.3:67144571-67144590 | None:intergenic | 35.0% | |
| ACTAAATATATCAGGCTGGA+CGG | + | chr8.3:67145064-67145083 | None:intergenic | 35.0% | |
| ACTCTTAATAGTAAAGGACG+AGG | - | chr8.3:67144220-67144239 | MS.gene85964:CDS | 35.0% | |
| AGTCACAGAAATTGTGTTGT+AGG | - | chr8.3:67143281-67143300 | MS.gene85964:CDS | 35.0% | |
| ATATCTGCATGTAGATTGGT+GGG | + | chr8.3:67144669-67144688 | None:intergenic | 35.0% | |
| ATTATACCGCAGATTTGTCA+GGG | - | chr8.3:67143661-67143680 | MS.gene85964:CDS | 35.0% | |
| ATTGCTTGTGAGTTGCTTAA+GGG | - | chr8.3:67143799-67143818 | MS.gene85964:intron | 35.0% | |
| CAAAAACAGACACAAGAGTT+GGG | + | chr8.3:67144535-67144554 | None:intergenic | 35.0% | |
| CAAGGATTGTGCGATATATT+TGG | - | chr8.3:67143924-67143943 | MS.gene85964:CDS | 35.0% | |
| CAAGTAACTGAAATGCGTAT+GGG | + | chr8.3:67144616-67144635 | None:intergenic | 35.0% | |
| CCAGATATTGCAGAAAATGT+AGG | - | chr8.3:67145297-67145316 | MS.gene85964:CDS | 35.0% | |
| CCAGTAATCAGCTTAAGATT+CGG | + | chr8.3:67145111-67145130 | None:intergenic | 35.0% | |
| CTCTTAATAGTAAAGGACGA+GGG | - | chr8.3:67144221-67144240 | MS.gene85964:CDS | 35.0% | |
| GAAGAAACAAAAAATTCCCG+GGG | + | chr8.3:67145395-67145414 | None:intergenic | 35.0% | |
| GAATGAGTATCCAATGCTTA+AGG | - | chr8.3:67144058-67144077 | MS.gene85964:CDS | 35.0% | |
| GATATTCAGTTCACTGTTTC+TGG | - | chr8.3:67144999-67145018 | MS.gene85964:CDS | 35.0% | |
| GCCTTATGTTTCTCACATTT+GGG | - | chr8.3:67144918-67144937 | MS.gene85964:CDS | 35.0% | |
| GGATCATATGAATGAATGGA+TGG | - | chr8.3:67143348-67143367 | MS.gene85964:CDS | 35.0% | |
| GTATTGTGACACTTCTTTCT+CGG | - | chr8.3:67145238-67145257 | MS.gene85964:CDS | 35.0% | |
| GTCAAATATGCCAAGTACTT+TGG | + | chr8.3:67144812-67144831 | None:intergenic | 35.0% | |
| TATATTAGGAGGGATATGGA+AGG | - | chr8.3:67143751-67143770 | MS.gene85964:intron | 35.0% | |
| TCAAAAACAGACACAAGAGT+TGG | + | chr8.3:67144536-67144555 | None:intergenic | 35.0% | |
| TGAATATCAAGAGAGACTTG+AGG | + | chr8.3:67144987-67145006 | None:intergenic | 35.0% | |
| TGAGTATATTAGGAGGGATA+TGG | - | chr8.3:67143747-67143766 | MS.gene85964:intron | 35.0% | |
| TTATATGGAGAAGAATGAGG+AGG | - | chr8.3:67143480-67143499 | MS.gene85964:CDS | 35.0% | |
| TTGAACATCAACAAGATCTG+TGG | + | chr8.3:67143992-67144011 | None:intergenic | 35.0% | |
| ! | AAACAGATAATGGTTGAAGG+TGG | + | chr8.3:67144471-67144490 | None:intergenic | 35.0% |
| ! | AACAGATAATGGTTGAAGGT+GGG | + | chr8.3:67144470-67144489 | None:intergenic | 35.0% |
| ! | ACCATTGATTGAAGCGTAAT+CGG | + | chr8.3:67143062-67143081 | None:intergenic | 35.0% |
| ! | CCTACATTTTCTGCAATATC+TGG | + | chr8.3:67145300-67145319 | None:intergenic | 35.0% |
| ! | CTCAAACAGATAATGGTTGA+AGG | + | chr8.3:67144474-67144493 | None:intergenic | 35.0% |
| ! | GGCAATTAAGTTTTTGACGA+CGG | - | chr8.3:67143597-67143616 | MS.gene85964:CDS | 35.0% |
| ! | TTCATCAGCATTGAGAAAAC+TGG | + | chr8.3:67144281-67144300 | None:intergenic | 35.0% |
| ! | TTCTTTTGTCACCTGATTCT+TGG | - | chr8.3:67144695-67144714 | MS.gene85964:CDS | 35.0% |
| !! | CTACTGACTCAAACAGATAA+TGG | + | chr8.3:67144481-67144500 | None:intergenic | 35.0% |
| !! | CTTGTTGCTAGTCTTCAAAA+AGG | - | chr8.3:67143025-67143044 | MS.gene85964:CDS | 35.0% |
| AAGATCTGTGGAGACATAAC+CGG | + | chr8.3:67143980-67143999 | None:intergenic | 40.0% | |
| AAGATTCGGAATCCAGAACT+GGG | + | chr8.3:67145097-67145116 | None:intergenic | 40.0% | |
| AAGCTCCTTTAATGCAAACC+CGG | - | chr8.3:67143885-67143904 | MS.gene85964:CDS | 40.0% | |
| AATCTGCGGTATAATCCCAT+CGG | + | chr8.3:67143656-67143675 | None:intergenic | 40.0% | |
| ACATTTGCAGTGATGACTTG+AGG | + | chr8.3:67145455-67145474 | None:intergenic | 40.0% | |
| AGCATTGTAAAGTTGGACGA+AGG | + | chr8.3:67145334-67145353 | None:intergenic | 40.0% | |
| ATCACGATTTCCCCAAATCA+TGG | - | chr8.3:67142984-67143003 | MS.gene85964:CDS | 40.0% | |
| ATGAATGGATGGGTGAGTTT+AGG | - | chr8.3:67143359-67143378 | MS.gene85964:CDS | 40.0% | |
| ATTGTAAAGTTGGACGAAGG+TGG | + | chr8.3:67145331-67145350 | None:intergenic | 40.0% | |
| CATTTGCAGTGATGACTTGA+GGG | + | chr8.3:67145454-67145473 | None:intergenic | 40.0% | |
| CCGAATCTTAAGCTGATTAC+TGG | - | chr8.3:67145108-67145127 | MS.gene85964:CDS | 40.0% | |
| CGCCTTATGTTTCTCACATT+TGG | - | chr8.3:67144917-67144936 | MS.gene85964:CDS | 40.0% | |
| CTAGTTATCCTTCTCTTGAG+GGG | - | chr8.3:67143395-67143414 | MS.gene85964:CDS | 40.0% | |
| CTTCCAGATATAATGATCCC+CGG | - | chr8.3:67145375-67145394 | MS.gene85964:CDS | 40.0% | |
| GAAGAATGAGGAGGAGTTTA+AGG | - | chr8.3:67143489-67143508 | MS.gene85964:CDS | 40.0% | |
| GACAGTATTATTTCAAGCCG+AGG | + | chr8.3:67144572-67144591 | None:intergenic | 40.0% | |
| GATTATACCGCAGATTTGTC+AGG | - | chr8.3:67143660-67143679 | MS.gene85964:CDS | 40.0% | |
| GATTGCTTGTGAGTTGCTTA+AGG | - | chr8.3:67143798-67143817 | MS.gene85964:intron | 40.0% | |
| GCAAGTAACTGAAATGCGTA+TGG | + | chr8.3:67144617-67144636 | None:intergenic | 40.0% | |
| GCCCAAATGTGAGAAACATA+AGG | + | chr8.3:67144922-67144941 | None:intergenic | 40.0% | |
| GCTAGTTATCCTTCTCTTGA+GGG | - | chr8.3:67143394-67143413 | MS.gene85964:CDS | 40.0% | |
| GGATCATTATATCTGGAAGG+GGG | + | chr8.3:67145374-67145393 | None:intergenic | 40.0% | |
| GGATTGTGCGATATATTTGG+TGG | - | chr8.3:67143927-67143946 | MS.gene85964:CDS | 40.0% | |
| GGGATCATTATATCTGGAAG+GGG | + | chr8.3:67145375-67145394 | None:intergenic | 40.0% | |
| GGGGATCATTATATCTGGAA+GGG | + | chr8.3:67145376-67145395 | None:intergenic | 40.0% | |
| GGTCTCTCTTTCTACAAAGA+AGG | - | chr8.3:67143948-67143967 | MS.gene85964:CDS | 40.0% | |
| GTAGTGATCTTGATACAAGG+AGG | - | chr8.3:67143773-67143792 | MS.gene85964:intron | 40.0% | |
| GTTGCTCGAATTTGCATTGA+GGG | - | chr8.3:67144401-67144420 | MS.gene85964:intron | 40.0% | |
| TAAGATTCGGAATCCAGAAC+TGG | + | chr8.3:67145098-67145117 | None:intergenic | 40.0% | |
| TATCTGTTTGAGTCAGTAGC+CGG | - | chr8.3:67144482-67144501 | MS.gene85964:CDS | 40.0% | |
| TCCAACTTTACAATGCTGGA+AGG | - | chr8.3:67145337-67145356 | MS.gene85964:CDS | 40.0% | |
| TCCGATTACGCTTCAATCAA+TGG | - | chr8.3:67143058-67143077 | MS.gene85964:CDS | 40.0% | |
| TCCTTCCAGCATTGTAAAGT+TGG | + | chr8.3:67145341-67145360 | None:intergenic | 40.0% | |
| TCGCACTAAATATATCAGGC+TGG | + | chr8.3:67145068-67145087 | None:intergenic | 40.0% | |
| TGAAGACTAGCAACAAGTTC+CGG | + | chr8.3:67143022-67143041 | None:intergenic | 40.0% | |
| TGCTAGTTATCCTTCTCTTG+AGG | - | chr8.3:67143393-67143412 | MS.gene85964:CDS | 40.0% | |
| TGTTGCTCGAATTTGCATTG+AGG | - | chr8.3:67144400-67144419 | MS.gene85964:intron | 40.0% | |
| TTAATAGTAAAGGACGAGGG+TGG | - | chr8.3:67144224-67144243 | MS.gene85964:CDS | 40.0% | |
| TTATACCGCAGATTTGTCAG+GGG | - | chr8.3:67143662-67143681 | MS.gene85964:CDS | 40.0% | |
| TTATTTCAAGCCGAGGGAAA+AGG | + | chr8.3:67144565-67144584 | None:intergenic | 40.0% | |
| TTCCAGATATAATGATCCCC+GGG | - | chr8.3:67145376-67145395 | MS.gene85964:CDS | 40.0% | |
| TTCGTCCAACTTTACAATGC+TGG | - | chr8.3:67145333-67145352 | MS.gene85964:CDS | 40.0% | |
| TTGCTCGAATTTGCATTGAG+GGG | - | chr8.3:67144402-67144421 | MS.gene85964:intron | 40.0% | |
| TTGCTGTGTGGACTTTGTTA+GGG | - | chr8.3:67143533-67143552 | MS.gene85964:CDS | 40.0% | |
| TTGCTTGTGAGTTGCTTAAG+GGG | - | chr8.3:67143800-67143819 | MS.gene85964:intron | 40.0% | |
| ! | ACAGATAATGGTTGAAGGTG+GGG | + | chr8.3:67144469-67144488 | None:intergenic | 40.0% |
| ! | ACTGATTCTCTTCAGACTCT+GGG | + | chr8.3:67144328-67144347 | None:intergenic | 40.0% |
| ! | CTGAGATTGGATTTTGTTGG+TGG | + | chr8.3:67142936-67142955 | None:intergenic | 40.0% |
| ! | GAGCTGAGATTGGATTTTGT+TGG | + | chr8.3:67142939-67142958 | None:intergenic | 40.0% |
| ! | GATAGACTGACCAAAGTACT+TGG | - | chr8.3:67144799-67144818 | MS.gene85964:CDS | 40.0% |
| ! | TTGAAACAAGCCTTTTCCCT+CGG | - | chr8.3:67144552-67144571 | MS.gene85964:CDS | 40.0% |
| !! | AGATTGGATTTTGTTGGTGG+CGG | + | chr8.3:67142933-67142952 | None:intergenic | 40.0% |
| !! | TACTGATTCTCTTCAGACTC+TGG | + | chr8.3:67144329-67144348 | None:intergenic | 40.0% |
| !! | TCACTGTTTCTGGTTAAGCA+TGG | - | chr8.3:67145009-67145028 | MS.gene85964:CDS | 40.0% |
| !! | TTTTTAGAGAGCTCCAGAGA+AGG | - | chr8.3:67144947-67144966 | MS.gene85964:CDS | 40.0% |
| !!! | ACATCTGCTTTTTGCAACTC+AGG | + | chr8.3:67144038-67144057 | None:intergenic | 40.0% |
| !!! | AGAGTTGCCTGAGTTTTTTG+AGG | - | chr8.3:67143327-67143346 | MS.gene85964:CDS | 40.0% |
| !!! | ATGATTTTGCACTTGCTGTG+TGG | - | chr8.3:67143521-67143540 | MS.gene85964:CDS | 40.0% |
| !!! | ATTTGGTGCCTTTTGAAGGA+AGG | + | chr8.3:67144764-67144783 | None:intergenic | 40.0% |
| !!! | CATCTGCTTTTTGCAACTCA+GGG | + | chr8.3:67144037-67144056 | None:intergenic | 40.0% |
| !!! | TCTCATTTGGTGCCTTTTGA+AGG | + | chr8.3:67144768-67144787 | None:intergenic | 40.0% |
| ACAATCCCCTGACAAATCTG+CGG | + | chr8.3:67143670-67143689 | None:intergenic | 45.0% | |
| ACCAAATGAGATCAGCCAAG+GGG | - | chr8.3:67144777-67144796 | MS.gene85964:CDS | 45.0% | |
| CACCAAATGAGATCAGCCAA+GGG | - | chr8.3:67144776-67144795 | MS.gene85964:CDS | 45.0% | |
| CGAATTTGCATTGAGGGGTT+GGG | - | chr8.3:67144407-67144426 | MS.gene85964:intron | 45.0% | |
| CGGGGATCATTATATCTGGA+AGG | + | chr8.3:67145377-67145396 | None:intergenic | 45.0% | |
| GAATTTGCATTGAGGGGTTG+GGG | - | chr8.3:67144408-67144427 | MS.gene85964:intron | 45.0% | |
| GAGTATCCAATGCTTAAGGC+AGG | - | chr8.3:67144062-67144081 | MS.gene85964:CDS | 45.0% | |
| GATTCCGAATGTGAGGTTGA+GGG | - | chr8.3:67143690-67143709 | MS.gene85964:CDS | 45.0% | |
| GCAAGGAAACGAACCAAATC+AGG | + | chr8.3:67144152-67144171 | None:intergenic | 45.0% | |
| GCATCAAGCACTTCTGATCA+AGG | - | chr8.3:67144844-67144863 | MS.gene85964:CDS | 45.0% | |
| GGATTGTGATTCCGAATGTG+AGG | - | chr8.3:67143683-67143702 | MS.gene85964:CDS | 45.0% | |
| GTGATCTTGATACAAGGAGG+AGG | - | chr8.3:67143776-67143795 | MS.gene85964:intron | 45.0% | |
| GTGATTCCCGATGATAGCTA+GGG | + | chr8.3:67142969-67142988 | None:intergenic | 45.0% | |
| TCGAATTTGCATTGAGGGGT+TGG | - | chr8.3:67144406-67144425 | MS.gene85964:intron | 45.0% | |
| TCTACAAAGAAGGCTGCAAC+CGG | - | chr8.3:67143958-67143977 | MS.gene85964:CDS | 45.0% | |
| TCTGCAATATCTGGCATGTC+AGG | + | chr8.3:67145291-67145310 | None:intergenic | 45.0% | |
| TGATTCCGAATGTGAGGTTG+AGG | - | chr8.3:67143689-67143708 | MS.gene85964:CDS | 45.0% | |
| TGCATGTAGATTGGTGGGAT+GGG | + | chr8.3:67144664-67144683 | None:intergenic | 45.0% | |
| TGCTCTTGTGGATGAGCTTA+GGG | - | chr8.3:67143432-67143451 | MS.gene85964:CDS | 45.0% | |
| TGGAGACTCACAAATGAGTC+TGG | + | chr8.3:67145169-67145188 | None:intergenic | 45.0% | |
| TTCCCGGGGATCATTATATC+TGG | + | chr8.3:67145381-67145400 | None:intergenic | 45.0% | |
| TTCTCGGCAAGAACAAGACA+GGG | - | chr8.3:67145254-67145273 | MS.gene85964:CDS | 45.0% | |
| TTCTGCATCCTGGGGTAAAA+TGG | - | chr8.3:67145209-67145228 | MS.gene85964:CDS | 45.0% | |
| TTGCTCTTGTGGATGAGCTT+AGG | - | chr8.3:67143431-67143450 | MS.gene85964:CDS | 45.0% | |
| TTGTGAGTCTCCAGTACTTC+TGG | - | chr8.3:67145176-67145195 | MS.gene85964:CDS | 45.0% | |
| TTTCTCGGCAAGAACAAGAC+AGG | - | chr8.3:67145253-67145272 | MS.gene85964:CDS | 45.0% | |
| ! | CTTGCTGTGTGGACTTTGTT+AGG | - | chr8.3:67143532-67143551 | MS.gene85964:CDS | 45.0% |
| ! | GCGCTTCTTTTCCAAGAATC+AGG | + | chr8.3:67144709-67144728 | None:intergenic | 45.0% |
| ! | TTCAGACTCTGGGAGCTTAA+AGG | + | chr8.3:67144318-67144337 | None:intergenic | 45.0% |
| ! | TTTGGTTCGTTTCCTTGCTG+CGG | - | chr8.3:67144154-67144173 | MS.gene85964:CDS | 45.0% |
| !! | ATAGTTTGTTTGCGGCCGAT+GGG | - | chr8.3:67143638-67143657 | MS.gene85964:CDS | 45.0% |
| !!! | TGGTTGAAGGTGGGGTTTTT+TGG | + | chr8.3:67144461-67144480 | None:intergenic | 45.0% |
| AACAAGTTCCGGAAGAAGCG+AGG | + | chr8.3:67143011-67143030 | None:intergenic | 50.0% | |
| AAGAAGCGAGGGCCATGATT+TGG | + | chr8.3:67142999-67143018 | None:intergenic | 50.0% | |
| AAGGGGATTGCTACGCGTTA+TGG | - | chr8.3:67143817-67143836 | MS.gene85964:CDS | 50.0% | |
| ACAAGTTCCGGAAGAAGCGA+GGG | + | chr8.3:67143010-67143029 | None:intergenic | 50.0% | |
| ACTCCAGGCCTTCCTTCAAA+AGG | - | chr8.3:67144753-67144772 | MS.gene85964:CDS | 50.0% | |
| AGAACAAGACAGGGTTGAGG+AGG | - | chr8.3:67145263-67145282 | MS.gene85964:CDS | 50.0% | |
| AGAAGCGAGGGCCATGATTT+GGG | + | chr8.3:67142998-67143017 | None:intergenic | 50.0% | |
| AGCGGTTTAAGAGTTTCCGG+TGG | + | chr8.3:67143256-67143275 | None:intergenic | 50.0% | |
| AGGGAACTGTGCACAAAGCT+GGG | + | chr8.3:67145423-67145442 | None:intergenic | 50.0% | |
| AGTGCACCTGCCTTAAGCAT+TGG | + | chr8.3:67144071-67144090 | None:intergenic | 50.0% | |
| ATGTAGATTGGTGGGATGGG+TGG | + | chr8.3:67144661-67144680 | None:intergenic | 50.0% | |
| CAACATTTGACTCCGCAGCA+AGG | + | chr8.3:67144169-67144188 | None:intergenic | 50.0% | |
| CGTGATTCCCGATGATAGCT+AGG | + | chr8.3:67142970-67142989 | None:intergenic | 50.0% | |
| CTCCTTTAATGCAAACCCGG+TGG | - | chr8.3:67143888-67143907 | MS.gene85964:CDS | 50.0% | |
| CTGCATGTAGATTGGTGGGA+TGG | + | chr8.3:67144665-67144684 | None:intergenic | 50.0% | |
| CTTTGGTCAGTCTATCCCCT+TGG | + | chr8.3:67144795-67144814 | None:intergenic | 50.0% | |
| GCAAGAACAAGACAGGGTTG+AGG | - | chr8.3:67145260-67145279 | MS.gene85964:CDS | 50.0% | |
| GCACCAAATGAGATCAGCCA+AGG | - | chr8.3:67144775-67144794 | MS.gene85964:CDS | 50.0% | |
| GGTTTAAGAGTTTCCGGTGG+TGG | + | chr8.3:67143253-67143272 | None:intergenic | 50.0% | |
| TAATTGCCGTAACCGCAAGC+TGG | + | chr8.3:67143585-67143604 | None:intergenic | 50.0% | |
| TATCTGGAAGGGGGTCTTCT+TGG | + | chr8.3:67145365-67145384 | None:intergenic | 50.0% | |
| TCCCCTTGGCTGATCTCATT+TGG | + | chr8.3:67144781-67144800 | None:intergenic | 50.0% | |
| TCCGAAGCCCTAGCTATCAT+CGG | - | chr8.3:67142959-67142978 | MS.gene85964:CDS | 50.0% | |
| TCCTCCCTCAACCTCACATT+CGG | + | chr8.3:67143697-67143716 | None:intergenic | 50.0% | |
| TGCATCCTGGGGTAAAATGG+TGG | - | chr8.3:67145212-67145231 | MS.gene85964:CDS | 50.0% | |
| TTAGAGAGCTCCAGAGAAGG+CGG | - | chr8.3:67144950-67144969 | MS.gene85964:CDS | 50.0% | |
| TTGTCCTTCCAATTCGCCAC+CGG | + | chr8.3:67143907-67143926 | None:intergenic | 50.0% | |
| ! | ACTGTCCACCATTTTACCCC+AGG | + | chr8.3:67145220-67145239 | None:intergenic | 50.0% |
| ! | AGCTTTGTGCACAGTTCCCT+GGG | - | chr8.3:67145423-67145442 | MS.gene85964:CDS | 50.0% |
| ! | TGCTGATGGTCTTGCTCTTG+TGG | - | chr8.3:67143420-67143439 | MS.gene85964:CDS | 50.0% |
| ! | TTAAGAGTTTCCGGTGGTGG+TGG | + | chr8.3:67143250-67143269 | None:intergenic | 50.0% |
| !! | CATAGTTTGTTTGCGGCCGA+TGG | - | chr8.3:67143637-67143656 | MS.gene85964:CDS | 50.0% |
| !! | GTGCGATTTTGACCCAGTTC+TGG | - | chr8.3:67145082-67145101 | MS.gene85964:CDS | 50.0% |
| AAACCCGGTGGCGAATTGGA+AGG | - | chr8.3:67143900-67143919 | MS.gene85964:CDS | 55.0% | |
| AGAAGCCCGCTTCACAAGAC+CGG | + | chr8.3:67144504-67144523 | None:intergenic | 55.0% | |
| ATCATGGCCCTCGCTTCTTC+CGG | - | chr8.3:67143000-67143019 | MS.gene85964:CDS | 55.0% | |
| ATCCTGCAGCTTCTGCATCC+TGG | - | chr8.3:67145199-67145218 | MS.gene85964:CDS | 55.0% | |
| ATGACTTGAGGGAACCTCCC+AGG | + | chr8.3:67145443-67145462 | None:intergenic | 55.0% | |
| ATGCAAACCCGGTGGCGAAT+TGG | - | chr8.3:67143896-67143915 | MS.gene85964:CDS | 55.0% | |
| CAGGGAACTGTGCACAAAGC+TGG | + | chr8.3:67145424-67145443 | None:intergenic | 55.0% | |
| CCCGATGATAGCTAGGGCTT+CGG | + | chr8.3:67142963-67142982 | None:intergenic | 55.0% | |
| CCGAAGCCCTAGCTATCATC+GGG | - | chr8.3:67142960-67142979 | MS.gene85964:CDS | 55.0% | |
| CGCCACCGGGTTTGCATTAA+AGG | + | chr8.3:67143893-67143912 | None:intergenic | 55.0% | |
| GAAGCGAGGGCCATGATTTG+GGG | + | chr8.3:67142997-67143016 | None:intergenic | 55.0% | |
| GAGGTTGAGGGAGGATGATG+AGG | - | chr8.3:67143702-67143721 | MS.gene85964:CDS | 55.0% | |
| GCTTTACTGTCCGCCTTCTC+TGG | + | chr8.3:67144963-67144982 | None:intergenic | 55.0% | |
| GGTGGCGAATTGGAAGGACA+AGG | - | chr8.3:67143906-67143925 | MS.gene85964:CDS | 55.0% | |
| TAGTAAAGGACGAGGGTGGC+AGG | - | chr8.3:67144228-67144247 | MS.gene85964:CDS | 55.0% | |
| TCAGCACTCCCCTCAAGAGA+AGG | + | chr8.3:67143406-67143425 | None:intergenic | 55.0% | |
| TCCGAATGTGAGGTTGAGGG+AGG | - | chr8.3:67143693-67143712 | MS.gene85964:CDS | 55.0% | |
| TCCTGCAGCTTCTGCATCCT+GGG | - | chr8.3:67145200-67145219 | MS.gene85964:CDS | 55.0% | |
| TCGTGACCAGCTTGCGGTTA+CGG | - | chr8.3:67143576-67143595 | MS.gene85964:CDS | 55.0% | |
| TGACTTGAGGGAACCTCCCA+GGG | + | chr8.3:67145442-67145461 | None:intergenic | 55.0% | |
| TGTCCTTCCAATTCGCCACC+GGG | + | chr8.3:67143906-67143925 | None:intergenic | 55.0% | |
| TGTGGATGAGCTTAGGGCTG+CGG | - | chr8.3:67143438-67143457 | MS.gene85964:CDS | 55.0% | |
| TTTGTGCACAGTTCCCTGGG+AGG | - | chr8.3:67145426-67145445 | MS.gene85964:CDS | 55.0% | |
| ! | AGTAGCCGGTCTTGTGAAGC+GGG | - | chr8.3:67144496-67144515 | MS.gene85964:CDS | 55.0% |
| ! | CAGCTTTGTGCACAGTTCCC+TGG | - | chr8.3:67145422-67145441 | MS.gene85964:CDS | 55.0% |
| ! | CAGTAGCCGGTCTTGTGAAG+CGG | - | chr8.3:67144495-67144514 | MS.gene85964:CDS | 55.0% |
| ! | GACTAGTCGTGACCAGCTTG+CGG | - | chr8.3:67143570-67143589 | MS.gene85964:CDS | 55.0% |
| ! | GCTGCAGGATCCAGAAGTAC+TGG | + | chr8.3:67145189-67145208 | None:intergenic | 55.0% |
| ! | TGTGAAGCGGGCTTCTGAGA+GGG | - | chr8.3:67144508-67144527 | MS.gene85964:CDS | 55.0% |
| ! | TTGTGAAGCGGGCTTCTGAG+AGG | - | chr8.3:67144507-67144526 | MS.gene85964:CDS | 55.0% |
| !! | GTGCCTTTTGAAGGAAGGCC+TGG | + | chr8.3:67144759-67144778 | None:intergenic | 55.0% |
| !! | TCTCTTGAGGGGAGTGCTGA+TGG | - | chr8.3:67143406-67143425 | MS.gene85964:CDS | 55.0% |
| AAGCGCAAGTGTTCCTGCCC+TGG | - | chr8.3:67144723-67144742 | MS.gene85964:CDS | 60.0% | |
| CCTGCAGCTTCTGCATCCTG+GGG | - | chr8.3:67145201-67145220 | MS.gene85964:CDS | 60.0% | |
| CGCAGCGTCAATCAACGACG+CGG | + | chr8.3:67143212-67143231 | None:intergenic | 60.0% | |
| GAGGGTGGCAGGCTACGTTA+TGG | - | chr8.3:67144239-67144258 | MS.gene85964:CDS | 60.0% | |
| GGGCTTCGGAGAGCTGAGAT+TGG | + | chr8.3:67142949-67142968 | None:intergenic | 60.0% | |
| ! | CGCGTCGTTGATTGACGCTG+CGG | - | chr8.3:67143210-67143229 | MS.gene85964:CDS | 60.0% |
| !! | AGAGTTTCCGGTGGTGGTGG+CGG | + | chr8.3:67143247-67143266 | None:intergenic | 60.0% |
| AGGCCTGGAGTAGACGCACC+AGG | + | chr8.3:67144744-67144763 | None:intergenic | 65.0% | |
| CCCCAGGATGCAGAAGCTGC+AGG | + | chr8.3:67145204-67145223 | None:intergenic | 65.0% | |
| GGCCTGGAGTAGACGCACCA+GGG | + | chr8.3:67144743-67144762 | None:intergenic | 65.0% | |
| TGCCCTGGTGCGTCTACTCC+AGG | - | chr8.3:67144738-67144757 | MS.gene85964:CDS | 65.0% | |
| TGGAGTAGACGCACCAGGGC+AGG | + | chr8.3:67144739-67144758 | None:intergenic | 65.0% | |
| ACAGCAGCCGCCACCACCAC+CGG | - | chr8.3:67143237-67143256 | MS.gene85964:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 67142923 | 67145485 | 67142923 | ID=MS.gene85964 |
| chr8.3 | mRNA | 67142923 | 67145485 | 67142923 | ID=MS.gene85964.t1;Parent=MS.gene85964 |
| chr8.3 | exon | 67144429 | 67145485 | 67144429 | ID=MS.gene85964.t1.exon1;Parent=MS.gene85964.t1 |
| chr8.3 | CDS | 67144429 | 67145485 | 67144429 | ID=cds.MS.gene85964.t1;Parent=MS.gene85964.t1 |
| chr8.3 | exon | 67143810 | 67144357 | 67143810 | ID=MS.gene85964.t1.exon2;Parent=MS.gene85964.t1 |
| chr8.3 | CDS | 67143810 | 67144357 | 67143810 | ID=cds.MS.gene85964.t1;Parent=MS.gene85964.t1 |
| chr8.3 | exon | 67142923 | 67143723 | 67142923 | ID=MS.gene85964.t1.exon3;Parent=MS.gene85964.t1 |
| chr8.3 | CDS | 67142923 | 67143723 | 67142923 | ID=cds.MS.gene85964.t1;Parent=MS.gene85964.t1 |
| Gene Sequence |
| Protein sequence |
