Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86305.t1 | XP_013465739.1 | 97.4 | 384 | 9 | 1 | 1 | 384 | 17 | 399 | 4.10E-224 | 786.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86305.t1 | Q65XS5 | 37.1 | 315 | 153 | 11 | 97 | 377 | 85 | 388 | 1.3e-45 | 185.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86305.t1 | A0A072VDW2 | 97.4 | 384 | 9 | 1 | 1 | 384 | 17 | 399 | 2.9e-224 | 786.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059247 | MS.gene86305 | -0.803346 | 3.64E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86305.t1 | MTR_1g009960 | 97.396 | 384 | 9 | 1 | 1 | 384 | 17 | 399 | 0.0 | 782 |
| MS.gene86305.t1 | MTR_1g009960 | 96.988 | 332 | 9 | 1 | 1 | 332 | 17 | 347 | 0.0 | 675 |
| MS.gene86305.t1 | MTR_3g108740 | 67.358 | 386 | 115 | 4 | 1 | 383 | 2 | 379 | 0.0 | 558 |
| MS.gene86305.t1 | MTR_4g127550 | 64.829 | 381 | 127 | 2 | 3 | 383 | 20 | 393 | 0.0 | 521 |
| MS.gene86305.t1 | MTR_2g037600 | 61.198 | 384 | 140 | 4 | 1 | 383 | 17 | 392 | 2.74e-171 | 483 |
| MS.gene86305.t1 | MTR_2g037620 | 56.085 | 378 | 148 | 4 | 6 | 383 | 24 | 383 | 5.65e-151 | 432 |
| MS.gene86305.t1 | MTR_1g016880 | 38.587 | 368 | 196 | 7 | 19 | 380 | 28 | 371 | 9.72e-79 | 247 |
| MS.gene86305.t1 | MTR_1g110290 | 39.474 | 380 | 189 | 10 | 14 | 377 | 32 | 386 | 2.39e-76 | 242 |
| MS.gene86305.t1 | MTR_2g005350 | 43.000 | 300 | 149 | 3 | 87 | 384 | 159 | 438 | 3.62e-73 | 234 |
| MS.gene86305.t1 | MTR_8g015500 | 40.881 | 318 | 165 | 6 | 62 | 377 | 110 | 406 | 5.82e-71 | 228 |
| MS.gene86305.t1 | MTR_6g083830 | 42.456 | 285 | 138 | 4 | 95 | 375 | 148 | 410 | 1.35e-68 | 222 |
| MS.gene86305.t1 | MTR_5g055480 | 39.683 | 315 | 163 | 5 | 64 | 375 | 91 | 381 | 2.51e-68 | 221 |
| MS.gene86305.t1 | MTR_5g006930 | 41.754 | 285 | 140 | 4 | 95 | 375 | 115 | 377 | 6.40e-68 | 219 |
| MS.gene86305.t1 | MTR_5g006920 | 41.404 | 285 | 141 | 4 | 95 | 375 | 150 | 412 | 1.13e-64 | 212 |
| MS.gene86305.t1 | MTR_3g104840 | 37.580 | 314 | 153 | 5 | 65 | 375 | 111 | 384 | 1.75e-63 | 208 |
| MS.gene86305.t1 | MTR_2g024120 | 36.913 | 298 | 153 | 10 | 96 | 366 | 61 | 350 | 4.06e-56 | 188 |
| MS.gene86305.t1 | MTR_8g094180 | 33.648 | 318 | 172 | 8 | 92 | 377 | 51 | 361 | 1.21e-50 | 174 |
| MS.gene86305.t1 | MTR_8g094180 | 35.849 | 265 | 139 | 6 | 92 | 328 | 51 | 312 | 7.55e-46 | 160 |
| MS.gene86305.t1 | MTR_3g106930 | 33.611 | 360 | 191 | 18 | 34 | 377 | 42 | 369 | 1.56e-41 | 150 |
| MS.gene86305.t1 | MTR_2g087610 | 30.960 | 323 | 159 | 11 | 87 | 375 | 66 | 358 | 7.07e-39 | 143 |
| MS.gene86305.t1 | MTR_1g031060 | 34.653 | 303 | 149 | 10 | 96 | 377 | 80 | 354 | 1.51e-34 | 131 |
| MS.gene86305.t1 | MTR_1g048320 | 31.818 | 308 | 163 | 7 | 89 | 377 | 57 | 336 | 1.61e-34 | 130 |
| MS.gene86305.t1 | MTR_1g031080 | 33.544 | 316 | 150 | 15 | 85 | 377 | 6 | 284 | 8.76e-34 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86305.t1 | AT4G31350 | 60.156 | 384 | 144 | 3 | 1 | 384 | 1 | 375 | 3.10e-166 | 470 |
| MS.gene86305.t1 | AT4G31350 | 60.156 | 384 | 144 | 3 | 1 | 384 | 1 | 375 | 3.10e-166 | 470 |
| MS.gene86305.t1 | AT4G31350 | 60.156 | 384 | 144 | 3 | 1 | 384 | 1 | 375 | 3.10e-166 | 470 |
| MS.gene86305.t1 | AT5G57270 | 56.806 | 382 | 156 | 3 | 5 | 383 | 10 | 385 | 3.50e-164 | 465 |
| MS.gene86305.t1 | AT5G57270 | 56.806 | 382 | 156 | 3 | 5 | 383 | 10 | 385 | 3.50e-164 | 465 |
| MS.gene86305.t1 | AT5G57270 | 56.806 | 382 | 156 | 3 | 5 | 383 | 10 | 385 | 3.50e-164 | 465 |
| MS.gene86305.t1 | AT5G57270 | 56.806 | 382 | 156 | 3 | 5 | 383 | 10 | 385 | 3.50e-164 | 465 |
| MS.gene86305.t1 | AT5G57270 | 56.806 | 382 | 156 | 3 | 5 | 383 | 10 | 385 | 3.50e-164 | 465 |
| MS.gene86305.t1 | AT2G19160 | 55.497 | 382 | 162 | 3 | 3 | 384 | 20 | 393 | 5.90e-162 | 460 |
| MS.gene86305.t1 | AT2G19160 | 55.497 | 382 | 162 | 3 | 3 | 384 | 20 | 393 | 5.90e-162 | 460 |
| MS.gene86305.t1 | AT4G25870 | 54.167 | 384 | 168 | 3 | 1 | 382 | 8 | 385 | 2.85e-161 | 458 |
| MS.gene86305.t1 | AT4G31350 | 59.375 | 384 | 142 | 4 | 1 | 384 | 1 | 370 | 4.42e-161 | 457 |
| MS.gene86305.t1 | AT4G30060 | 54.712 | 382 | 163 | 4 | 3 | 382 | 21 | 394 | 1.71e-154 | 441 |
| MS.gene86305.t1 | AT4G30060 | 54.712 | 382 | 163 | 4 | 3 | 382 | 21 | 394 | 1.71e-154 | 441 |
| MS.gene86305.t1 | AT3G21310 | 43.396 | 318 | 156 | 5 | 62 | 377 | 81 | 376 | 8.66e-77 | 242 |
| MS.gene86305.t1 | AT3G21310 | 43.396 | 318 | 156 | 5 | 62 | 377 | 81 | 376 | 8.66e-77 | 242 |
| MS.gene86305.t1 | AT5G11730 | 43.574 | 319 | 154 | 6 | 62 | 377 | 84 | 379 | 3.43e-76 | 241 |
| MS.gene86305.t1 | AT5G25970 | 44.406 | 286 | 134 | 4 | 95 | 377 | 117 | 380 | 3.06e-75 | 238 |
| MS.gene86305.t1 | AT5G25970 | 44.406 | 286 | 134 | 4 | 95 | 377 | 117 | 380 | 3.06e-75 | 238 |
| MS.gene86305.t1 | AT5G25970 | 44.406 | 286 | 134 | 4 | 95 | 377 | 117 | 380 | 3.06e-75 | 238 |
| MS.gene86305.t1 | AT1G51770 | 42.236 | 322 | 160 | 6 | 59 | 377 | 87 | 385 | 2.13e-74 | 237 |
| MS.gene86305.t1 | AT1G73810 | 44.599 | 287 | 131 | 5 | 97 | 377 | 147 | 411 | 5.52e-73 | 233 |
| MS.gene86305.t1 | AT5G16170 | 44.170 | 283 | 140 | 3 | 97 | 377 | 136 | 402 | 6.03e-73 | 233 |
| MS.gene86305.t1 | AT1G10280 | 42.105 | 323 | 164 | 5 | 64 | 384 | 111 | 412 | 8.92e-72 | 230 |
| MS.gene86305.t1 | AT1G68390 | 40.000 | 325 | 167 | 6 | 58 | 377 | 100 | 401 | 1.97e-70 | 227 |
| MS.gene86305.t1 | AT1G10880 | 42.414 | 290 | 140 | 6 | 92 | 377 | 113 | 379 | 4.78e-70 | 225 |
| MS.gene86305.t1 | AT1G68380 | 36.761 | 389 | 185 | 11 | 15 | 379 | 36 | 387 | 5.89e-66 | 214 |
| MS.gene86305.t1 | AT1G51770 | 37.888 | 322 | 147 | 7 | 59 | 377 | 87 | 358 | 5.49e-58 | 193 |
| MS.gene86305.t1 | AT5G14550 | 37.793 | 299 | 150 | 10 | 96 | 366 | 64 | 354 | 2.61e-54 | 184 |
| MS.gene86305.t1 | AT5G14550 | 37.793 | 299 | 150 | 10 | 96 | 366 | 64 | 354 | 3.66e-54 | 183 |
| MS.gene86305.t1 | AT5G14550 | 40.873 | 252 | 123 | 9 | 96 | 328 | 64 | 308 | 8.01e-52 | 176 |
| MS.gene86305.t1 | AT1G11940 | 35.621 | 306 | 163 | 11 | 96 | 375 | 73 | 370 | 5.66e-49 | 170 |
| MS.gene86305.t1 | AT1G62305 | 36.000 | 300 | 151 | 11 | 96 | 366 | 68 | 355 | 9.79e-49 | 169 |
| MS.gene86305.t1 | AT5G25330 | 38.514 | 296 | 145 | 14 | 97 | 377 | 81 | 354 | 2.12e-48 | 168 |
| MS.gene86305.t1 | AT3G52060 | 34.694 | 294 | 151 | 10 | 96 | 377 | 74 | 338 | 9.13e-47 | 163 |
| MS.gene86305.t1 | AT5G14550 | 36.364 | 286 | 145 | 11 | 96 | 366 | 64 | 327 | 9.04e-43 | 152 |
| MS.gene86305.t1 | AT1G62305 | 38.679 | 212 | 108 | 5 | 96 | 289 | 68 | 275 | 1.75e-41 | 149 |
| MS.gene86305.t1 | AT3G21310 | 46.821 | 173 | 89 | 2 | 62 | 232 | 81 | 252 | 4.12e-41 | 146 |
| MS.gene86305.t1 | AT4G32290 | 34.650 | 329 | 183 | 10 | 64 | 377 | 60 | 371 | 1.09e-40 | 148 |
| MS.gene86305.t1 | AT5G22070 | 32.051 | 312 | 153 | 9 | 97 | 377 | 71 | 354 | 4.86e-40 | 145 |
| MS.gene86305.t1 | AT1G11940 | 41.011 | 178 | 96 | 4 | 96 | 267 | 73 | 247 | 7.24e-37 | 135 |
| MS.gene86305.t1 | AT1G62305 | 33.000 | 300 | 136 | 12 | 96 | 366 | 68 | 331 | 1.46e-35 | 134 |
Find 84 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATACAAAATGTTGGTTATC+AGG | 0.204352 | 1.3:-10261675 | None:intergenic |
| ATCAATTTATCTTGAGTTTC+CGG | 0.235833 | 1.3:-10263980 | None:intergenic |
| ATTGCACCTTGCGAGTTAAA+TGG | 0.295978 | 1.3:+10263917 | MS.gene86305:CDS |
| GATGTCTCGTCCAACAAAAT+AGG | 0.299048 | 1.3:-10260437 | None:intergenic |
| TTGCGGTTTCCCTCCATATT+CGG | 0.306368 | 1.3:-10262618 | None:intergenic |
| TTAAATTTATCAGCCGAATA+TGG | 0.312461 | 1.3:+10262605 | MS.gene86305:intron |
| CCGAGATTCAGTCTCTTTAT+CGG | 0.320366 | 1.3:-10259986 | None:intergenic |
| CAAACTTAAAGAGGCCTACT+TGG | 0.327146 | 1.3:+10259794 | MS.gene86305:CDS |
| TTGATTGGTCCGAAGGAAAA+TGG | 0.332260 | 1.3:+10262808 | MS.gene86305:CDS |
| GAGTTTCCGGATAAAACTTC+CGG | 0.336942 | 1.3:-10263967 | None:intergenic |
| AATGGCATCCTAGGTCATTC+AGG | 0.339509 | 1.3:+10262826 | MS.gene86305:CDS |
| AACTTGGGGAAGAATTTCTA+TGG | 0.357256 | 1.3:+10261611 | MS.gene86305:CDS |
| ATAAATTCAAGCATCATTGC+AGG | 0.386140 | 1.3:+10262434 | MS.gene86305:CDS |
| ATGTCTCGTCCAACAAAATA+GGG | 0.391447 | 1.3:-10260436 | None:intergenic |
| ATCCAGGCGGAATCGCAAAT+TGG | 0.399315 | 1.3:+10262772 | MS.gene86305:CDS |
| TGAGGCGGAAAGGAGACTTT+TGG | 0.402038 | 1.3:+10261635 | MS.gene86305:CDS |
| GCTTGAATTTATTAAAATAG+AGG | 0.405441 | 1.3:-10262423 | None:intergenic |
| AAAACATAAAAGCAACTTTA+GGG | 0.408320 | 1.3:-10260056 | None:intergenic |
| TCAATTTCTTTCAGGTAACT+TGG | 0.409545 | 1.3:+10261595 | MS.gene86305:intron |
| GCTCTGGCATACATTCTTCC+AGG | 0.421167 | 1.3:+10260107 | MS.gene86305:CDS |
| CAATTTCTTTCAGGTAACTT+GGG | 0.448407 | 1.3:+10261596 | MS.gene86305:intron |
| GACCAATTTGCGATTCCGCC+TGG | 0.448772 | 1.3:-10262774 | None:intergenic |
| GGTGAATTCCCGAGTCTGTA+CGG | 0.449505 | 1.3:-10259965 | None:intergenic |
| GATACCGGTCCGCATGGAAA+TGG | 0.453440 | 1.3:+10262156 | MS.gene86305:CDS |
| TCTCAAGGTTGTAGTGTTGT+TGG | 0.455242 | 1.3:+10259910 | MS.gene86305:CDS |
| CAAGTGTCAGCTTTATTGAC+AGG | 0.461823 | 1.3:+10261987 | MS.gene86305:CDS |
| AGTTTCCGGATAAAACTTCC+GGG | 0.462746 | 1.3:-10263966 | None:intergenic |
| TGTTCTTTGTTTAACTCTCA+AGG | 0.472432 | 1.3:+10259895 | MS.gene86305:CDS |
| GGGAAGAATTTCTATGGTTG+AGG | 0.477859 | 1.3:+10261617 | MS.gene86305:CDS |
| CCGAAGGAAAATGGCATCCT+AGG | 0.478726 | 1.3:+10262817 | MS.gene86305:CDS |
| GACACAGATCAAACTTAAAG+AGG | 0.482413 | 1.3:+10259785 | MS.gene86305:CDS |
| TCCCGAGTCTGTACGGGTGG+TGG | 0.487361 | 1.3:-10259958 | None:intergenic |
| TACAGTGGTTCTCGATGAAA+CGG | 0.498255 | 1.3:+10262371 | MS.gene86305:intron |
| TATGTTTAGATGCTTGATCC+AGG | 0.504214 | 1.3:+10262756 | MS.gene86305:intron |
| GGTCGGTGACATATGTTGAT+TGG | 0.514974 | 1.3:+10262793 | MS.gene86305:CDS |
| GCAGCACGCTCTAATAGTTA+TGG | 0.518271 | 1.3:+10262393 | MS.gene86305:CDS |
| AGCCACCACCCGTACAGACT+CGG | 0.518673 | 1.3:+10259956 | MS.gene86305:CDS |
| ACGAGACATCCACAGTGAAC+CGG | 0.526163 | 1.3:+10260450 | MS.gene86305:CDS |
| ATGTAGTTGAATTCGAGAAA+AGG | 0.526682 | 1.3:-10264006 | None:intergenic |
| AAACTAATGCAGGGCCATGA+AGG | 0.526685 | 1.3:+10260361 | MS.gene86305:intron |
| ATACAAAATGTTGGTTATCA+GGG | 0.528558 | 1.3:-10261674 | None:intergenic |
| CAAGGTTGTAGTGTTGTTGG+TGG | 0.530530 | 1.3:+10259913 | MS.gene86305:CDS |
| CGATAAAGAGACTGAATCTC+GGG | 0.531188 | 1.3:+10259987 | MS.gene86305:CDS |
| GTATGCCAGAGCTTCTCAAA+AGG | 0.532388 | 1.3:-10260096 | None:intergenic |
| ACAAAATCAAAGCGGCGCAC+TGG | 0.534914 | 1.3:-10261944 | None:intergenic |
| GTTGCCTGAAGTAGAAAAGA+AGG | 0.536747 | 1.3:+10262197 | MS.gene86305:CDS |
| GATCTTGTTATCTATTTGCC+CGG | 0.539473 | 1.3:+10263948 | MS.gene86305:CDS |
| TTTGCATCACTTGTATAATG+TGG | 0.541176 | 1.3:-10263756 | None:intergenic |
| AAATAGGGGCTGACATGTAT+CGG | 0.542436 | 1.3:-10260421 | None:intergenic |
| GCCACCACCCGTACAGACTC+GGG | 0.543889 | 1.3:+10259957 | MS.gene86305:CDS |
| GTGAATTCCCGAGTCTGTAC+GGG | 0.546668 | 1.3:-10259964 | None:intergenic |
| TGTCTATGTACATGCATCAA+AGG | 0.549613 | 1.3:+10260393 | MS.gene86305:CDS |
| ATGGCATCCTAGGTCATTCA+GGG | 0.550473 | 1.3:+10262827 | MS.gene86305:CDS |
| TTCTCAAAAGGTAATGATCC+CGG | 0.552277 | 1.3:-10260084 | None:intergenic |
| CCTGCCATTTCCATGCGGAC+CGG | 0.561360 | 1.3:-10262160 | None:intergenic |
| CCGATAAAGAGACTGAATCT+CGG | 0.567122 | 1.3:+10259986 | MS.gene86305:CDS |
| TTTCTATGGTTGAGGCGGAA+AGG | 0.568574 | 1.3:+10261625 | MS.gene86305:CDS |
| ATTTATCAGCCGAATATGGA+GGG | 0.569886 | 1.3:+10262609 | MS.gene86305:intron |
| TTTGAGCCATTTAACTCGCA+AGG | 0.572858 | 1.3:-10263923 | None:intergenic |
| CCGGTCCGCATGGAAATGGC+AGG | 0.574083 | 1.3:+10262160 | MS.gene86305:CDS |
| AATTTCTTTCAGGTAACTTG+GGG | 0.576412 | 1.3:+10261597 | MS.gene86305:intron |
| ACATATGTTGATTGGTCCGA+AGG | 0.578375 | 1.3:+10262801 | MS.gene86305:CDS |
| CAGACAACAATACAAAATGT+TGG | 0.582838 | 1.3:-10261683 | None:intergenic |
| AAGAATTTCTATGGTTGAGG+CGG | 0.595575 | 1.3:+10261620 | MS.gene86305:CDS |
| ACATTATACAAGTGATGCAA+AGG | 0.598519 | 1.3:+10263758 | MS.gene86305:CDS |
| TAAATTCAAGCATCATTGCA+GGG | 0.600918 | 1.3:+10262435 | MS.gene86305:CDS |
| AATTTATCAGCCGAATATGG+AGG | 0.605235 | 1.3:+10262608 | MS.gene86305:intron |
| TCACGAGCCCTGAATGACCT+AGG | 0.607827 | 1.3:-10262834 | None:intergenic |
| ACTAAAACGATAATCCAAGT+AGG | 0.618618 | 1.3:-10259808 | None:intergenic |
| GCTCATCAGAATAGCAGTTG+CGG | 0.627810 | 1.3:-10262635 | None:intergenic |
| TTAAACAAAGAACACGTCGA+GGG | 0.629738 | 1.3:-10259886 | None:intergenic |
| AATTCCCGAGTCTGTACGGG+TGG | 0.635893 | 1.3:-10259961 | None:intergenic |
| GTACTATGCTGTTCAAAGCA+CGG | 0.641245 | 1.3:+10260032 | MS.gene86305:CDS |
| TATGTGGATACCGGTCCGCA+TGG | 0.642514 | 1.3:+10262150 | MS.gene86305:CDS |
| AGGCGGAATCGCAAATTGGT+CGG | 0.649905 | 1.3:+10262776 | MS.gene86305:CDS |
| TAAACAAAGAACACGTCGAG+GGG | 0.662055 | 1.3:-10259885 | None:intergenic |
| TGTCTCGTCCAACAAAATAG+GGG | 0.669880 | 1.3:-10260435 | None:intergenic |
| GTTTAGATGCTTGATCCAGG+CGG | 0.670501 | 1.3:+10262759 | MS.gene86305:intron |
| AAACAAAGAACACGTCGAGG+GGG | 0.699297 | 1.3:-10259884 | None:intergenic |
| ACATACCTGCCATTTCCATG+CGG | 0.707617 | 1.3:-10262165 | None:intergenic |
| TACCCCATACCGGTTCACTG+TGG | 0.707943 | 1.3:-10260459 | None:intergenic |
| ACATGTCTTACAGAGAACAG+TGG | 0.711790 | 1.3:+10263892 | MS.gene86305:intron |
| AGTTGTACACAAAATCAAAG+CGG | 0.723003 | 1.3:-10261952 | None:intergenic |
| GTTAAACAAAGAACACGTCG+AGG | 0.732342 | 1.3:-10259887 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAATATAATAAATGAAAA+AGG | - | chr1.3:10260202-10260221 | None:intergenic | 10.0% |
| !! | TATTTATACTAGATAAAAAT+TGG | - | chr1.3:10262992-10263011 | None:intergenic | 10.0% |
| !! | TTACTATTACTATTAATTAA+TGG | + | chr1.3:10263169-10263188 | MS.gene86305:intron | 10.0% |
| !! | AAAAGCAATATTATAGAATA+TGG | - | chr1.3:10263831-10263850 | None:intergenic | 15.0% |
| !! | AAATAAAAAAAAAAGCTATG+TGG | + | chr1.3:10262134-10262153 | MS.gene86305:intron | 15.0% |
| !!! | TATTTTACTATTAAGGATTA+AGG | - | chr1.3:10261182-10261201 | None:intergenic | 15.0% |
| !! | AAAAACATAAAAGCAACTTT+AGG | - | chr1.3:10260060-10260079 | None:intergenic | 20.0% |
| !! | AAAAATATGCACTAAAAAAG+AGG | - | chr1.3:10263627-10263646 | None:intergenic | 20.0% |
| !! | AAAACATAAAAGCAACTTTA+GGG | - | chr1.3:10260059-10260078 | None:intergenic | 20.0% |
| !! | AATATTATAGAATATGGAAG+AGG | - | chr1.3:10263825-10263844 | None:intergenic | 20.0% |
| !! | CAAGTAAAGTTCAAATAAAT+AGG | - | chr1.3:10260339-10260358 | None:intergenic | 20.0% |
| !! | CGACTTATTATTAATTATCA+TGG | - | chr1.3:10261006-10261025 | None:intergenic | 20.0% |
| !! | GCTTGAATTTATTAAAATAG+AGG | - | chr1.3:10262426-10262445 | None:intergenic | 20.0% |
| !! | TAAACTCATGAAAAAAATAG+CGG | + | chr1.3:10262866-10262885 | MS.gene86305:CDS | 20.0% |
| !! | TGATATTGATAAAAACTCAT+TGG | + | chr1.3:10261342-10261361 | MS.gene86305:intron | 20.0% |
| !! | TGGAATATTGTAAATTAACA+AGG | - | chr1.3:10263668-10263687 | None:intergenic | 20.0% |
| !! | TGGTAAAACAAACAAATATA+TGG | + | chr1.3:10263534-10263553 | MS.gene86305:intron | 20.0% |
| !! | TTATCATTCTTAGCTTATAT+TGG | - | chr1.3:10260535-10260554 | None:intergenic | 20.0% |
| !!! | ATATATACTAGCTCTTTATA+TGG | + | chr1.3:10260497-10260516 | MS.gene86305:intron | 20.0% |
| !!! | ATTACGTTCAAAAGTATAAT+TGG | + | chr1.3:10263070-10263089 | MS.gene86305:intron | 20.0% |
| !!! | CTTCAGCTTAATATTTTATT+AGG | - | chr1.3:10260910-10260929 | None:intergenic | 20.0% |
| !!! | GTTTTGAAACAAAAACAAAA+TGG | + | chr1.3:10263514-10263533 | MS.gene86305:intron | 20.0% |
| !!! | TTATTCATCTAATTTGTAGA+AGG | - | chr1.3:10262028-10262047 | None:intergenic | 20.0% |
| !!! | TTTTTCAATATACCATTGTA+TGG | - | chr1.3:10263458-10263477 | None:intergenic | 20.0% |
| ! | AAAAGGAACATACAATTGAA+CGG | - | chr1.3:10261909-10261928 | None:intergenic | 25.0% |
| ! | AAACCAAAAAAAATAGCACT+TGG | - | chr1.3:10260292-10260311 | None:intergenic | 25.0% |
| ! | AAATTAACAAGGTAAAGACA+AGG | - | chr1.3:10263657-10263676 | None:intergenic | 25.0% |
| ! | AATCAATTATGACAAAAGAC+GGG | - | chr1.3:10260976-10260995 | None:intergenic | 25.0% |
| ! | AATTAACAAGGTAAAGACAA+GGG | - | chr1.3:10263656-10263675 | None:intergenic | 25.0% |
| ! | ACGTCTTCTTTCAAAATAAT+AGG | + | chr1.3:10260171-10260190 | MS.gene86305:intron | 25.0% |
| ! | ATCAATTTATCTTGAGTTTC+CGG | - | chr1.3:10263983-10264002 | None:intergenic | 25.0% |
| ! | ATTCTAACAATTCCATACAA+TGG | + | chr1.3:10263443-10263462 | MS.gene86305:intron | 25.0% |
| ! | CAATCAATTATGACAAAAGA+CGG | - | chr1.3:10260977-10260996 | None:intergenic | 25.0% |
| ! | CACTTATAAAGAGAAAAGAT+TGG | - | chr1.3:10262693-10262712 | None:intergenic | 25.0% |
| ! | TATAACCGACAATAATAACT+TGG | - | chr1.3:10262501-10262520 | None:intergenic | 25.0% |
| ! | TATCAAATGATCGAAATTTG+AGG | + | chr1.3:10260605-10260624 | MS.gene86305:intron | 25.0% |
| ! | TATCTAGTATAAATATCACC+AGG | + | chr1.3:10262997-10263016 | MS.gene86305:intron | 25.0% |
| ! | TATGTAGAATCTTCAATGAA+AGG | - | chr1.3:10262067-10262086 | None:intergenic | 25.0% |
| ! | TTAAATTTATCAGCCGAATA+TGG | + | chr1.3:10262605-10262624 | MS.gene86305:intron | 25.0% |
| ! | TTACTTGTAAAACTAATGCA+GGG | + | chr1.3:10260352-10260371 | MS.gene86305:intron | 25.0% |
| ! | TTCTCTTTATAAGTGATACA+GGG | + | chr1.3:10262698-10262717 | MS.gene86305:intron | 25.0% |
| ! | TTTACTTGTAAAACTAATGC+AGG | + | chr1.3:10260351-10260370 | MS.gene86305:intron | 25.0% |
| ! | TTTCTCTTTATAAGTGATAC+AGG | + | chr1.3:10262697-10262716 | MS.gene86305:intron | 25.0% |
| ! | TTTGTTCCATTGCTAAAATT+TGG | + | chr1.3:10261730-10261749 | MS.gene86305:intron | 25.0% |
| !! | AATACAAAATGTTGGTTATC+AGG | - | chr1.3:10261678-10261697 | None:intergenic | 25.0% |
| !! | AGTATGAATGCAATTGTTTT+CGG | - | chr1.3:10261053-10261072 | None:intergenic | 25.0% |
| !! | ATACAAAATGTTGGTTATCA+GGG | - | chr1.3:10261677-10261696 | None:intergenic | 25.0% |
| !! | ATTTTGTATTGTTGTCTGAT+AGG | + | chr1.3:10261688-10261707 | MS.gene86305:CDS | 25.0% |
| !! | GATTTTCATCAAGATTGTTA+TGG | - | chr1.3:10263039-10263058 | None:intergenic | 25.0% |
| !! | GTTCCTTAAAATTTTGTCAT+TGG | + | chr1.3:10261433-10261452 | MS.gene86305:intron | 25.0% |
| !! | TCTCCAATGACAAAATTTTA+AGG | - | chr1.3:10261439-10261458 | None:intergenic | 25.0% |
| !! | TTGTTACAAAAAGCATAGAA+AGG | - | chr1.3:10262564-10262583 | None:intergenic | 25.0% |
| !!! | AGATCTCAATTTTTAGATCA+CGG | - | chr1.3:10263418-10263437 | None:intergenic | 25.0% |
| !!! | CTAAAATTTGGTTGGTTTTT+GGG | + | chr1.3:10261742-10261761 | MS.gene86305:intron | 25.0% |
| !!! | TTACCAAGTGCTATTTTTTT+TGG | + | chr1.3:10260286-10260305 | MS.gene86305:intron | 25.0% |
| AAAAAAAGCTATGTGGATAC+CGG | + | chr1.3:10262141-10262160 | MS.gene86305:intron | 30.0% | |
| AACAGCAAATTCAGTTATCT+AGG | + | chr1.3:10263584-10263603 | MS.gene86305:intron | 30.0% | |
| ACAGCAAATTCAGTTATCTA+GGG | + | chr1.3:10263585-10263604 | MS.gene86305:intron | 30.0% | |
| ACTAAAACGATAATCCAAGT+AGG | - | chr1.3:10259811-10259830 | None:intergenic | 30.0% | |
| ACTAACTAACTAAGCTTACA+AGG | - | chr1.3:10263239-10263258 | None:intergenic | 30.0% | |
| AGAGTGCAAAAACATTTGAA+GGG | - | chr1.3:10262916-10262935 | None:intergenic | 30.0% | |
| AGTTGTACACAAAATCAAAG+CGG | - | chr1.3:10261821-10261840 | None:intergenic | 30.0% | |
| ATAAATTCAAGCATCATTGC+AGG | + | chr1.3:10262434-10262453 | MS.gene86305:CDS | 30.0% | |
| ATCATAAGCATTCTTTCAAC+AGG | - | chr1.3:10263857-10263876 | None:intergenic | 30.0% | |
| ATGTAGTTGAATTCGAGAAA+AGG | - | chr1.3:10264009-10264028 | None:intergenic | 30.0% | |
| ATTTGAGTGGATACATTACA+TGG | - | chr1.3:10261403-10261422 | None:intergenic | 30.0% | |
| CAAATCTTAACCTCAATGAA+TGG | - | chr1.3:10262269-10262288 | None:intergenic | 30.0% | |
| CAACTAAATCCAAAGAAACA+GGG | - | chr1.3:10260845-10260864 | None:intergenic | 30.0% | |
| CAGACAACAATACAAAATGT+TGG | - | chr1.3:10261686-10261705 | None:intergenic | 30.0% | |
| CATTCATTGAGGTTAAGATT+TGG | + | chr1.3:10262267-10262286 | MS.gene86305:intron | 30.0% | |
| GAAAGAAATTGAAAACCAGT+TGG | - | chr1.3:10261587-10261606 | None:intergenic | 30.0% | |
| GAAAGGAACATACAATTGAA+CGG | - | chr1.3:10261775-10261794 | None:intergenic | 30.0% | |
| GATGCTTATTACTTGTAACT+GGG | - | chr1.3:10260760-10260779 | None:intergenic | 30.0% | |
| GATTCTACATATCTGTTACA+TGG | + | chr1.3:10262076-10262095 | MS.gene86305:intron | 30.0% | |
| GCACTTACATTAAAAAAGGT+TGG | - | chr1.3:10262669-10262688 | None:intergenic | 30.0% | |
| GCTAAAGACAAATTCTTTGA+TGG | - | chr1.3:10262949-10262968 | None:intergenic | 30.0% | |
| GCTAAGAATGATAAAGAATG+TGG | + | chr1.3:10260541-10260560 | MS.gene86305:intron | 30.0% | |
| GGTTATAGCATCACAAATAA+TGG | + | chr1.3:10262514-10262533 | MS.gene86305:intron | 30.0% | |
| TAAATTCAAGCATCATTGCA+GGG | + | chr1.3:10262435-10262454 | MS.gene86305:CDS | 30.0% | |
| TAACCTCAATGAATGGTTTA+TGG | - | chr1.3:10262262-10262281 | None:intergenic | 30.0% | |
| TAGTGACAATTTCATAGCTA+TGG | + | chr1.3:10261243-10261262 | MS.gene86305:intron | 30.0% | |
| TCCTTATATATAGACCAACA+AGG | - | chr1.3:10263320-10263339 | None:intergenic | 30.0% | |
| TGATGCTTATTACTTGTAAC+TGG | - | chr1.3:10260761-10260780 | None:intergenic | 30.0% | |
| TGGTGCACTTACATTAAAAA+AGG | - | chr1.3:10262673-10262692 | None:intergenic | 30.0% | |
| TTCCATTGCTAAAATTTGGT+TGG | + | chr1.3:10261734-10261753 | MS.gene86305:intron | 30.0% | |
| TTTGAAGATAAAAGCTGTAC+TGG | - | chr1.3:10263688-10263707 | None:intergenic | 30.0% | |
| ! | AAATCCTTCTTTTCTACTTC+AGG | - | chr1.3:10262204-10262223 | None:intergenic | 30.0% |
| ! | AAGAGTGCAAAAACATTTGA+AGG | - | chr1.3:10262917-10262936 | None:intergenic | 30.0% |
| ! | AATTTCTTTCAGGTAACTTG+GGG | + | chr1.3:10261597-10261616 | MS.gene86305:intron | 30.0% |
| ! | AGAAAAGAAGGATTTTCGAA+AGG | + | chr1.3:10262209-10262228 | MS.gene86305:CDS | 30.0% |
| ! | AGACAGAAAATTTTCCTTCA+TGG | - | chr1.3:10260378-10260397 | None:intergenic | 30.0% |
| ! | ATAAAAATTGGCTCTCTGAA+AGG | - | chr1.3:10262980-10262999 | None:intergenic | 30.0% |
| ! | CAATTTCTTTCAGGTAACTT+GGG | + | chr1.3:10261596-10261615 | MS.gene86305:intron | 30.0% |
| ! | GAAAAGAAGGATTTTCGAAA+GGG | + | chr1.3:10262210-10262229 | MS.gene86305:CDS | 30.0% |
| ! | TCAATTTCTTTCAGGTAACT+TGG | + | chr1.3:10261595-10261614 | MS.gene86305:intron | 30.0% |
| ! | TCATTCATTTTCCAAAGTGT+TGG | - | chr1.3:10260666-10260685 | None:intergenic | 30.0% |
| ! | TGTTCTTTGTTTAACTCTCA+AGG | + | chr1.3:10259895-10259914 | MS.gene86305:CDS | 30.0% |
| !! | AACCAACCAAATTTTAGCAA+TGG | - | chr1.3:10261739-10261758 | None:intergenic | 30.0% |
| !! | CATTCATTTTCCAAAGTGTT+GGG | - | chr1.3:10260665-10260684 | None:intergenic | 30.0% |
| !! | GATCTCAATTTTTAGATCAC+GGG | - | chr1.3:10263417-10263436 | None:intergenic | 30.0% |
| !! | GTTTTTGTTTCAAAACTACG+AGG | - | chr1.3:10263510-10263529 | None:intergenic | 30.0% |
| !! | TATTTCACTTCCTCTAGTTT+TGG | + | chr1.3:10263790-10263809 | MS.gene86305:intron | 30.0% |
| !! | TCTTCTTGTTTCTAATACAG+TGG | + | chr1.3:10262356-10262375 | MS.gene86305:intron | 30.0% |
| !! | TGCTTTTATGTTTTTGACTC+CGG | + | chr1.3:10260065-10260084 | MS.gene86305:CDS | 30.0% |
| !!! | ACTGGTTTTCAATTTCTTTC+AGG | + | chr1.3:10261587-10261606 | MS.gene86305:intron | 30.0% |
| !!! | ATGCGTGATTTTTTGAATAG+TGG | - | chr1.3:10261544-10261563 | None:intergenic | 30.0% |
| !!! | GCTAAAATTTGGTTGGTTTT+TGG | + | chr1.3:10261741-10261760 | MS.gene86305:intron | 30.0% |
| !!! | GGTTTGCTGCATTTTATTTT+TGG | + | chr1.3:10261209-10261228 | MS.gene86305:intron | 30.0% |
| !!! | TTTTTTCTGTTACAAGAGAG+AGG | - | chr1.3:10263350-10263369 | None:intergenic | 30.0% |
| AAAGTTCATCTAATCACGCA+AGG | + | chr1.3:10260933-10260952 | MS.gene86305:intron | 35.0% | |
| AAATGAATGACTGTGTAAGG+CGG | + | chr1.3:10260676-10260695 | MS.gene86305:intron | 35.0% | |
| AACGCATTTCAGTATTTGAG+TGG | - | chr1.3:10261416-10261435 | None:intergenic | 35.0% | |
| AACTTGGGGAAGAATTTCTA+TGG | + | chr1.3:10261611-10261630 | MS.gene86305:CDS | 35.0% | |
| AAGAATTTCTATGGTTGAGG+CGG | + | chr1.3:10261620-10261639 | MS.gene86305:CDS | 35.0% | |
| AATTTATCAGCCGAATATGG+AGG | + | chr1.3:10262608-10262627 | MS.gene86305:intron | 35.0% | |
| ATCTCGAATGGTGTTTCTTA+GGG | + | chr1.3:10261154-10261173 | MS.gene86305:intron | 35.0% | |
| ATGTCTCGTCCAACAAAATA+GGG | - | chr1.3:10260439-10260458 | None:intergenic | 35.0% | |
| ATTTATCAGCCGAATATGGA+GGG | + | chr1.3:10262609-10262628 | MS.gene86305:intron | 35.0% | |
| CAACCATAAACCATTCATTG+AGG | + | chr1.3:10262256-10262275 | MS.gene86305:intron | 35.0% | |
| CAGCAAATTCAGTTATCTAG+GGG | + | chr1.3:10263586-10263605 | MS.gene86305:intron | 35.0% | |
| CATGTCAGAAAAACTACCAT+TGG | - | chr1.3:10262323-10262342 | None:intergenic | 35.0% | |
| CCAACTAAATCCAAAGAAAC+AGG | - | chr1.3:10260846-10260865 | None:intergenic | 35.0% | |
| CTAAGCTTACAAGGATAACT+AGG | - | chr1.3:10263230-10263249 | None:intergenic | 35.0% | |
| GAATAGGAATGTCATATACC+TGG | - | chr1.3:10260128-10260147 | None:intergenic | 35.0% | |
| GACACAGATCAAACTTAAAG+AGG | + | chr1.3:10259785-10259804 | MS.gene86305:CDS | 35.0% | |
| GCTGACCAAGTTATTATTGT+CGG | + | chr1.3:10262493-10262512 | MS.gene86305:intron | 35.0% | |
| GGAAAATGAATGACTGTGTA+AGG | + | chr1.3:10260673-10260692 | MS.gene86305:intron | 35.0% | |
| TATGCACTAAAAAAGAGGTC+CGG | - | chr1.3:10263622-10263641 | None:intergenic | 35.0% | |
| TATGTTTAGATGCTTGATCC+AGG | + | chr1.3:10262756-10262775 | MS.gene86305:intron | 35.0% | |
| TGTCTATGTACATGCATCAA+AGG | + | chr1.3:10260393-10260412 | MS.gene86305:CDS | 35.0% | |
| TTAAACAAAGAACACGTCGA+GGG | - | chr1.3:10259889-10259908 | None:intergenic | 35.0% | |
| TTCTCAAAAGGTAATGATCC+CGG | - | chr1.3:10260087-10260106 | None:intergenic | 35.0% | |
| TTTGTTAACACCCAACACTT+TGG | + | chr1.3:10260652-10260671 | MS.gene86305:intron | 35.0% | |
| ! | AAATCTAAGAGTGTGGTCTA+TGG | - | chr1.3:10260150-10260169 | None:intergenic | 35.0% |
| ! | CAGAAATTTCCCTGTTTCTT+TGG | + | chr1.3:10260833-10260852 | MS.gene86305:intron | 35.0% |
| ! | CCTGTTTCTTTGGATTTAGT+TGG | + | chr1.3:10260843-10260862 | MS.gene86305:intron | 35.0% |
| ! | GATCTTGTTATCTATTTGCC+CGG | + | chr1.3:10263948-10263967 | MS.gene86305:CDS | 35.0% |
| ! | GCCTTGTTGGTCTATATATA+AGG | + | chr1.3:10263316-10263335 | MS.gene86305:intron | 35.0% |
| !! | GACAAGCATTGATATGAATG+AGG | - | chr1.3:10260253-10260272 | None:intergenic | 35.0% |
| !! | GCTTTTATGTTTTTGACTCC+GGG | + | chr1.3:10260066-10260085 | MS.gene86305:CDS | 35.0% |
| !!! | GGTTTTAATTTAATTCGCGC+AGG | - | chr1.3:10260807-10260826 | None:intergenic | 35.0% |
| !!! | TTCCTCTAGTTTTGGTTCTA+AGG | + | chr1.3:10263798-10263817 | MS.gene86305:intron | 35.0% |
| AAACTCAGCAAGACTAACTG+AGG | - | chr1.3:10263278-10263297 | None:intergenic | 40.0% | |
| AAATAGGGGCTGACATGTAT+CGG | - | chr1.3:10260424-10260443 | None:intergenic | 40.0% | |
| ACAGGGAAATTTCTGCTCAA+AGG | - | chr1.3:10260828-10260847 | None:intergenic | 40.0% | |
| ACATGTCTTACAGAGAACAG+TGG | + | chr1.3:10263892-10263911 | MS.gene86305:intron | 40.0% | |
| AGACGTGAAATCTAAGAGTG+TGG | - | chr1.3:10260157-10260176 | None:intergenic | 40.0% | |
| AGTTTCCGGATAAAACTTCC+GGG | - | chr1.3:10263969-10263988 | None:intergenic | 40.0% | |
| ATACGCCAAACAAGTTAGCA+GGG | - | chr1.3:10262739-10262758 | None:intergenic | 40.0% | |
| ATTGCACCTTGCGAGTTAAA+TGG | + | chr1.3:10263917-10263936 | MS.gene86305:CDS | 40.0% | |
| CAAACTTAAAGAGGCCTACT+TGG | + | chr1.3:10259794-10259813 | MS.gene86305:CDS | 40.0% | |
| CATCTCGAATGGTGTTTCTT+AGG | + | chr1.3:10261153-10261172 | MS.gene86305:intron | 40.0% | |
| CCGAGATTCAGTCTCTTTAT+CGG | - | chr1.3:10259989-10260008 | None:intergenic | 40.0% | |
| CCGATAAAGAGACTGAATCT+CGG | + | chr1.3:10259986-10260005 | MS.gene86305:CDS | 40.0% | |
| CGATAAAGAGACTGAATCTC+GGG | + | chr1.3:10259987-10260006 | MS.gene86305:CDS | 40.0% | |
| GACCTTAGAACCAAAACTAG+AGG | - | chr1.3:10263803-10263822 | None:intergenic | 40.0% | |
| GAGTTTCCGGATAAAACTTC+CGG | - | chr1.3:10263970-10263989 | None:intergenic | 40.0% | |
| GATGTCTCGTCCAACAAAAT+AGG | - | chr1.3:10260440-10260459 | None:intergenic | 40.0% | |
| GCTTACAAGGATAACTAGGA+AGG | - | chr1.3:10263226-10263245 | None:intergenic | 40.0% | |
| GGGAAGAATTTCTATGGTTG+AGG | + | chr1.3:10261617-10261636 | MS.gene86305:CDS | 40.0% | |
| GGTAGAATGTTTAGACTTCC+TGG | - | chr1.3:10263018-10263037 | None:intergenic | 40.0% | |
| GGTATACAGCTGAAGCAAAA+AGG | - | chr1.3:10261926-10261945 | None:intergenic | 40.0% | |
| GTACTATGCTGTTCAAAGCA+CGG | + | chr1.3:10260032-10260051 | MS.gene86305:CDS | 40.0% | |
| GTTAAACAAAGAACACGTCG+AGG | - | chr1.3:10259890-10259909 | None:intergenic | 40.0% | |
| GTTGCCTGAAGTAGAAAAGA+AGG | + | chr1.3:10262197-10262216 | MS.gene86305:CDS | 40.0% | |
| TAAACAAAGAACACGTCGAG+GGG | - | chr1.3:10259888-10259907 | None:intergenic | 40.0% | |
| TACAGTGGTTCTCGATGAAA+CGG | + | chr1.3:10262371-10262390 | MS.gene86305:intron | 40.0% | |
| TAGTTGGAACTCGTTGAACT+AGG | + | chr1.3:10260859-10260878 | MS.gene86305:intron | 40.0% | |
| TCTCAAGGTTGTAGTGTTGT+TGG | + | chr1.3:10259910-10259929 | MS.gene86305:CDS | 40.0% | |
| TGTCCAATGTACGAAACCAA+TGG | + | chr1.3:10262304-10262323 | MS.gene86305:intron | 40.0% | |
| TGTCTCGTCCAACAAAATAG+GGG | - | chr1.3:10260438-10260457 | None:intergenic | 40.0% | |
| TTTGAGCCATTTAACTCGCA+AGG | - | chr1.3:10263926-10263945 | None:intergenic | 40.0% | |
| ! | AAGAGTGTGGTCTATGGAAT+AGG | - | chr1.3:10260144-10260163 | None:intergenic | 40.0% |
| ! | ACATATGTTGATTGGTCCGA+AGG | + | chr1.3:10262801-10262820 | MS.gene86305:CDS | 40.0% |
| ! | TTGATTGGTCCGAAGGAAAA+TGG | + | chr1.3:10262808-10262827 | MS.gene86305:CDS | 40.0% |
| !! | ATTTGCCCGGAAGTTTTATC+CGG | + | chr1.3:10263961-10263980 | MS.gene86305:CDS | 40.0% |
| !! | CAAGTGTCAGCTTTATTGAC+AGG | + | chr1.3:10261987-10262006 | MS.gene86305:CDS | 40.0% |
| !! | CATTACCTTTTGAGAAGCTC+TGG | + | chr1.3:10260091-10260110 | MS.gene86305:CDS | 40.0% |
| !! | CTACCATTGGTTTCGTACAT+TGG | - | chr1.3:10262310-10262329 | None:intergenic | 40.0% |
| !! | GCTTTGAAGAACATCTCGAA+TGG | + | chr1.3:10261142-10261161 | MS.gene86305:intron | 40.0% |
| AAAAAAGAGGTCCGGCTAAC+AGG | - | chr1.3:10263614-10263633 | None:intergenic | 45.0% | |
| AAACAAAGAACACGTCGAGG+GGG | - | chr1.3:10259887-10259906 | None:intergenic | 45.0% | |
| AAACTAATGCAGGGCCATGA+AGG | + | chr1.3:10260361-10260380 | MS.gene86305:intron | 45.0% | |
| AATGGCATCCTAGGTCATTC+AGG | + | chr1.3:10262826-10262845 | MS.gene86305:CDS | 45.0% | |
| ACAAAATCAAAGCGGCTCAC+TGG | - | chr1.3:10261813-10261832 | None:intergenic | 45.0% | |
| ACAAGGCTAACTAACTACGC+TGG | - | chr1.3:10263303-10263322 | None:intergenic | 45.0% | |
| AGATCACGGGATCATGAAGT+TGG | - | chr1.3:10263404-10263423 | None:intergenic | 45.0% | |
| ATGGCATCCTAGGTCATTCA+GGG | + | chr1.3:10262827-10262846 | MS.gene86305:CDS | 45.0% | |
| CATACGCCAAACAAGTTAGC+AGG | - | chr1.3:10262740-10262759 | None:intergenic | 45.0% | |
| GCAGCACGCTCTAATAGTTA+TGG | + | chr1.3:10262393-10262412 | MS.gene86305:CDS | 45.0% | |
| GCTCATCAGAATAGCAGTTG+CGG | - | chr1.3:10262638-10262657 | None:intergenic | 45.0% | |
| GGTATACAGCTGAAGCAGAA+AGG | - | chr1.3:10261792-10261811 | None:intergenic | 45.0% | |
| GGTCGGTGACATATGTTGAT+TGG | + | chr1.3:10262793-10262812 | MS.gene86305:CDS | 45.0% | |
| GTATGCCAGAGCTTCTCAAA+AGG | - | chr1.3:10260099-10260118 | None:intergenic | 45.0% | |
| GTTTAGATGCTTGATCCAGG+CGG | + | chr1.3:10262759-10262778 | MS.gene86305:intron | 45.0% | |
| TCTTAGTAGCTAGTGCCAAC+TGG | + | chr1.3:10261569-10261588 | MS.gene86305:intron | 45.0% | |
| TGATGAGCTATACCCCATAC+CGG | - | chr1.3:10260472-10260491 | None:intergenic | 45.0% | |
| TTGCGGTTTCCCTCCATATT+CGG | - | chr1.3:10262621-10262640 | None:intergenic | 45.0% | |
| TTTCTATGGTTGAGGCGGAA+AGG | + | chr1.3:10261625-10261644 | MS.gene86305:CDS | 45.0% | |
| ! | ACATACCTGCCATTTCCATG+CGG | - | chr1.3:10262168-10262187 | None:intergenic | 45.0% |
| ! | ATCTAATCACGCAAGGCACT+AGG | + | chr1.3:10260940-10260959 | MS.gene86305:intron | 45.0% |
| ! | CAAGGTTGTAGTGTTGTTGG+TGG | + | chr1.3:10259913-10259932 | MS.gene86305:CDS | 45.0% |
| ! | CATGTCAGCCCCTATTTTGT+TGG | + | chr1.3:10260427-10260446 | MS.gene86305:CDS | 45.0% |
| ! | GGATTTTCGAAAGGGTTCAC+AGG | + | chr1.3:10262218-10262237 | MS.gene86305:CDS | 45.0% |
| ! | TCTAATCACGCAAGGCACTA+GGG | + | chr1.3:10260941-10260960 | MS.gene86305:intron | 45.0% |
| !! | GCGTAGTTAGTTAGCCTTGT+TGG | + | chr1.3:10263303-10263322 | MS.gene86305:intron | 45.0% |
| !! | TCTCTCCCTGCTAACTTGTT+TGG | + | chr1.3:10262731-10262750 | MS.gene86305:intron | 45.0% |
| !!! | CCTAGGATGCCATTTTCCTT+CGG | - | chr1.3:10262820-10262839 | None:intergenic | 45.0% |
| !! | ACATAAAAATAAATAAATAA+AGG | + | chr1.3:10261497-10261516 | MS.gene86305:intron | 5.0% |
| !!! | AAAATTATATTTTACTATTA+AGG | - | chr1.3:10261189-10261208 | None:intergenic | 5.0% |
| !!! | TTAATAGTAAAATATAATTT+TGG | + | chr1.3:10261188-10261207 | MS.gene86305:intron | 5.0% |
| ACAAAATCAAAGCGGCGCAC+TGG | - | chr1.3:10261947-10261966 | None:intergenic | 50.0% | |
| ACATCCACAGTGAACCGGTA+TGG | + | chr1.3:10260455-10260474 | MS.gene86305:intron | 50.0% | |
| ACGAGACATCCACAGTGAAC+CGG | + | chr1.3:10260450-10260469 | MS.gene86305:CDS | 50.0% | |
| AGGCGGAATCGCAAATTGGT+CGG | + | chr1.3:10262776-10262795 | MS.gene86305:CDS | 50.0% | |
| AGTTAGCAGGGAGAGAGAGA+TGG | - | chr1.3:10262727-10262746 | None:intergenic | 50.0% | |
| ATCCACAGTGAACCGGTATG+GGG | + | chr1.3:10260457-10260476 | MS.gene86305:intron | 50.0% | |
| ATCCAGGCGGAATCGCAAAT+TGG | + | chr1.3:10262772-10262791 | MS.gene86305:CDS | 50.0% | |
| CATCCACAGTGAACCGGTAT+GGG | + | chr1.3:10260456-10260475 | MS.gene86305:intron | 50.0% | |
| CCGAAGGAAAATGGCATCCT+AGG | + | chr1.3:10262817-10262836 | MS.gene86305:CDS | 50.0% | |
| GCTCTGGCATACATTCTTCC+AGG | + | chr1.3:10260107-10260126 | MS.gene86305:CDS | 50.0% | |
| GGTGAATTCCCGAGTCTGTA+CGG | - | chr1.3:10259968-10259987 | None:intergenic | 50.0% | |
| GTGAATTCCCGAGTCTGTAC+GGG | - | chr1.3:10259967-10259986 | None:intergenic | 50.0% | |
| ! | TGAGGCGGAAAGGAGACTTT+TGG | + | chr1.3:10261635-10261654 | MS.gene86305:CDS | 50.0% |
| AATTCCCGAGTCTGTACGGG+TGG | - | chr1.3:10259964-10259983 | None:intergenic | 55.0% | |
| GACCAATTTGCGATTCCGCC+TGG | - | chr1.3:10262777-10262796 | None:intergenic | 55.0% | |
| GATACCGGTCCGCATGGAAA+TGG | + | chr1.3:10262156-10262175 | MS.gene86305:CDS | 55.0% | |
| TATGTGGATACCGGTCCGCA+TGG | + | chr1.3:10262150-10262169 | MS.gene86305:CDS | 55.0% | |
| TCACGAGCCCTGAATGACCT+AGG | - | chr1.3:10262837-10262856 | None:intergenic | 55.0% | |
| !! | ATCTAGGGGCACCTGTTAGC+CGG | + | chr1.3:10263600-10263619 | MS.gene86305:intron | 55.0% |
| !! | TACCCCATACCGGTTCACTG+TGG | - | chr1.3:10260462-10260481 | None:intergenic | 55.0% |
| AGCCACCACCCGTACAGACT+CGG | + | chr1.3:10259956-10259975 | MS.gene86305:CDS | 60.0% | |
| ! | CCTGCCATTTCCATGCGGAC+CGG | - | chr1.3:10262163-10262182 | None:intergenic | 60.0% |
| CCGGTCCGCATGGAAATGGC+AGG | + | chr1.3:10262160-10262179 | MS.gene86305:CDS | 65.0% | |
| GCCACCACCCGTACAGACTC+GGG | + | chr1.3:10259957-10259976 | MS.gene86305:CDS | 65.0% | |
| TCCCGAGTCTGTACGGGTGG+TGG | - | chr1.3:10259961-10259980 | None:intergenic | 65.0% | |
| GTCGAGGGGGAGCTCTGCAG+CGG | - | chr1.3:10259874-10259893 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 10259772 | 10264033 | 10259772 | ID=MS.gene86305 |
| chr1.3 | mRNA | 10259772 | 10264033 | 10259772 | ID=MS.gene86305.t1;Parent=MS.gene86305 |
| chr1.3 | exon | 10259772 | 10260128 | 10259772 | ID=MS.gene86305.t1.exon1;Parent=MS.gene86305.t1 |
| chr1.3 | CDS | 10259772 | 10260128 | 10259772 | ID=cds.MS.gene86305.t1;Parent=MS.gene86305.t1 |
| chr1.3 | exon | 10260373 | 10260471 | 10260373 | ID=MS.gene86305.t1.exon2;Parent=MS.gene86305.t1 |
| chr1.3 | CDS | 10260373 | 10260471 | 10260373 | ID=cds.MS.gene86305.t1;Parent=MS.gene86305.t1 |
| chr1.3 | exon | 10261609 | 10261709 | 10261609 | ID=MS.gene86305.t1.exon3;Parent=MS.gene86305.t1 |
| chr1.3 | CDS | 10261609 | 10261709 | 10261609 | ID=cds.MS.gene86305.t1;Parent=MS.gene86305.t1 |
| chr1.3 | exon | 10261937 | 10262008 | 10261937 | ID=MS.gene86305.t1.exon4;Parent=MS.gene86305.t1 |
| chr1.3 | CDS | 10261937 | 10262008 | 10261937 | ID=cds.MS.gene86305.t1;Parent=MS.gene86305.t1 |
| chr1.3 | exon | 10262149 | 10262239 | 10262149 | ID=MS.gene86305.t1.exon5;Parent=MS.gene86305.t1 |
| chr1.3 | CDS | 10262149 | 10262239 | 10262149 | ID=cds.MS.gene86305.t1;Parent=MS.gene86305.t1 |
| chr1.3 | exon | 10262376 | 10262456 | 10262376 | ID=MS.gene86305.t1.exon6;Parent=MS.gene86305.t1 |
| chr1.3 | CDS | 10262376 | 10262456 | 10262376 | ID=cds.MS.gene86305.t1;Parent=MS.gene86305.t1 |
| chr1.3 | exon | 10262618 | 10262680 | 10262618 | ID=MS.gene86305.t1.exon7;Parent=MS.gene86305.t1 |
| chr1.3 | CDS | 10262618 | 10262680 | 10262618 | ID=cds.MS.gene86305.t1;Parent=MS.gene86305.t1 |
| chr1.3 | exon | 10262765 | 10262887 | 10262765 | ID=MS.gene86305.t1.exon8;Parent=MS.gene86305.t1 |
| chr1.3 | CDS | 10262765 | 10262887 | 10262765 | ID=cds.MS.gene86305.t1;Parent=MS.gene86305.t1 |
| chr1.3 | exon | 10263741 | 10263779 | 10263741 | ID=MS.gene86305.t1.exon9;Parent=MS.gene86305.t1 |
| chr1.3 | CDS | 10263741 | 10263779 | 10263741 | ID=cds.MS.gene86305.t1;Parent=MS.gene86305.t1 |
| chr1.3 | exon | 10263905 | 10264033 | 10263905 | ID=MS.gene86305.t1.exon10;Parent=MS.gene86305.t1 |
| chr1.3 | CDS | 10263905 | 10264033 | 10263905 | ID=cds.MS.gene86305.t1;Parent=MS.gene86305.t1 |
| Gene Sequence |
| Protein sequence |
