Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86824.t1 | XP_013468871.1 | 98.6 | 415 | 6 | 0 | 38 | 452 | 36 | 450 | 7.40E-233 | 816.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86824.t1 | Q9SGU9 | 77.2 | 400 | 91 | 0 | 44 | 443 | 42 | 441 | 1.4e-179 | 630.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86824.t1 | A0A072VNE2 | 98.6 | 415 | 6 | 0 | 38 | 452 | 36 | 450 | 5.3e-233 | 816.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029829 | MS.gene86824 | PPI |
| MS.gene86824 | MS.gene75011 | PPI |
| MS.gene24606 | MS.gene86824 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86824.t1 | MTR_1g077890 | 97.124 | 452 | 11 | 1 | 1 | 452 | 1 | 450 | 0.0 | 910 |
| MS.gene86824.t1 | MTR_3g080850 | 77.143 | 420 | 95 | 1 | 26 | 445 | 23 | 441 | 0.0 | 661 |
| MS.gene86824.t1 | MTR_6g012730 | 30.114 | 352 | 227 | 9 | 92 | 437 | 134 | 472 | 9.92e-41 | 152 |
| MS.gene86824.t1 | MTR_7g011230 | 29.042 | 334 | 221 | 8 | 95 | 424 | 196 | 517 | 3.79e-37 | 143 |
| MS.gene86824.t1 | MTR_1g064320 | 27.342 | 395 | 249 | 13 | 39 | 424 | 82 | 447 | 3.69e-35 | 136 |
| MS.gene86824.t1 | MTR_1g064320 | 27.296 | 392 | 247 | 13 | 42 | 424 | 86 | 448 | 9.78e-35 | 135 |
| MS.gene86824.t1 | MTR_6g012730 | 29.462 | 353 | 208 | 10 | 92 | 437 | 134 | 452 | 8.73e-34 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86824.t1 | AT1G64660 | 74.299 | 428 | 104 | 2 | 19 | 443 | 17 | 441 | 0.0 | 644 |
| MS.gene86824.t1 | AT3G01120 | 33.731 | 335 | 204 | 8 | 95 | 424 | 224 | 545 | 1.41e-49 | 177 |
| MS.gene86824.t1 | AT1G33320 | 30.861 | 337 | 214 | 9 | 93 | 424 | 33 | 355 | 1.15e-42 | 155 |
| MS.gene86824.t1 | AT1G33320 | 30.861 | 337 | 214 | 9 | 93 | 424 | 72 | 394 | 2.04e-42 | 155 |
| MS.gene86824.t1 | AT1G33320 | 30.435 | 322 | 205 | 9 | 108 | 424 | 3 | 310 | 3.09e-37 | 139 |
| MS.gene86824.t1 | AT3G57050 | 29.745 | 353 | 220 | 10 | 79 | 424 | 57 | 388 | 1.94e-35 | 136 |
| MS.gene86824.t1 | AT3G57050 | 29.462 | 353 | 221 | 10 | 79 | 424 | 35 | 366 | 2.29e-35 | 135 |
| MS.gene86824.t1 | AT3G57050 | 29.745 | 353 | 220 | 10 | 79 | 424 | 113 | 444 | 4.89e-35 | 136 |
| MS.gene86824.t1 | AT3G57050 | 29.745 | 353 | 220 | 10 | 79 | 424 | 98 | 429 | 5.06e-35 | 135 |
| MS.gene86824.t1 | AT3G57050 | 32.609 | 276 | 168 | 8 | 79 | 346 | 113 | 378 | 8.57e-34 | 130 |
Find 144 sgRNAs with CRISPR-Local
Find 431 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATAGTTCAAATGCTATTT+TGG | 0.073928 | 1.1:-58306558 | None:intergenic |
| AAAGTGATTCAATTCTTATT+AGG | 0.168129 | 1.1:-58307034 | None:intergenic |
| TTGCAAAACTATGGACAATT+TGG | 0.197366 | 1.1:+58306806 | MS.gene86824:CDS |
| AACATGCGTCGGAGAGTTTC+TGG | 0.220883 | 1.1:-58300855 | None:intergenic |
| CGCTTGGCGGTTGCGGTGGC+GGG | 0.228790 | 1.1:-58300663 | None:intergenic |
| TCGCTTGGCGGTTGCGGTGG+CGG | 0.232225 | 1.1:-58300664 | None:intergenic |
| CATGATGTGGATGGTCTTCT+AGG | 0.248249 | 1.1:-58306685 | None:intergenic |
| AAGTGATTCAATTCTTATTA+GGG | 0.263216 | 1.1:-58307033 | None:intergenic |
| CTATGGACAATTTGGTTTCA+TGG | 0.269872 | 1.1:+58306814 | MS.gene86824:CDS |
| GCCAGCGCACGACACGAATT+TGG | 0.278260 | 1.1:+58300774 | MS.gene86824:CDS |
| TGGTTTCATGGCTGTTAGTT+TGG | 0.281840 | 1.1:+58306826 | MS.gene86824:CDS |
| ATGAGCTATTTGCAAAACTA+TGG | 0.283875 | 1.1:+58306797 | MS.gene86824:CDS |
| GTATCTAGACTTCAAGAATA+TGG | 0.292860 | 1.1:+58307007 | MS.gene86824:CDS |
| ATGGAATTCACTAGGCTTGC+AGG | 0.299058 | 1.1:-58306485 | None:intergenic |
| TTCATCAACCATTTCAATAT+CGG | 0.310566 | 1.1:-58301156 | None:intergenic |
| AGGATGTCAATAGGGTATAT+TGG | 0.322482 | 1.1:+58306947 | MS.gene86824:CDS |
| TGTTGGTCCTAATAGCATTA+TGG | 0.326242 | 1.1:-58306528 | None:intergenic |
| TCTGAGGAAAAGGTTCTTGC+TGG | 0.335620 | 1.1:+58306905 | MS.gene86824:CDS |
| GGTTTCATGGCTGTTAGTTT+GGG | 0.336700 | 1.1:+58306827 | MS.gene86824:CDS |
| GAAACACTTATGTCTTGTTC+TGG | 0.350339 | 1.1:+58306857 | MS.gene86824:CDS |
| CAAGGGGCCATAATGCTATT+AGG | 0.360521 | 1.1:+58306521 | MS.gene86824:CDS |
| CCATTAGACGGCTGAGGTTA+AGG | 0.367268 | 1.1:-58300941 | None:intergenic |
| TTGGAGGATTGCGGCGGAAA+TGG | 0.369797 | 1.1:-58301015 | None:intergenic |
| CGCATGTTCGCCGGAGAGTT+AGG | 0.381110 | 1.1:+58300870 | MS.gene86824:CDS |
| ACGAATTTGGCGAACACGGC+GGG | 0.381591 | 1.1:+58300787 | MS.gene86824:CDS |
| CTTGGCGGTTGCGGTGGCGG+GGG | 0.384494 | 1.1:-58300661 | None:intergenic |
| CCTTAACCTCAGCCGTCTAA+TGG | 0.390905 | 1.1:+58300941 | MS.gene86824:CDS |
| TTGGGACTTTGGAGCAGAAA+TGG | 0.390914 | 1.1:+58306966 | MS.gene86824:CDS |
| TCAATTCACAACAAAGACTA+TGG | 0.391666 | 1.1:+58306719 | MS.gene86824:CDS |
| TGCTATGTTCTTTCATCCTT+AGG | 0.394998 | 1.1:-58306601 | None:intergenic |
| GGTGGGGCAGATATCATTGC+AGG | 0.399765 | 1.1:+58301386 | MS.gene86824:CDS |
| GGATGTCAATAGGGTATATT+GGG | 0.402478 | 1.1:+58306948 | MS.gene86824:CDS |
| TTCGATACGGTTTCGCTTGG+CGG | 0.407277 | 1.1:-58300676 | None:intergenic |
| CGAATATACCGGAGTTATGT+AGG | 0.411012 | 1.1:+58301246 | MS.gene86824:CDS |
| CACAACAAAGACTATGGTTA+TGG | 0.412875 | 1.1:+58306725 | MS.gene86824:CDS |
| GCCAAATTCGTGTCGTGCGC+TGG | 0.417697 | 1.1:-58300775 | None:intergenic |
| GGTCTTGTGAGGATGTCAAT+AGG | 0.421102 | 1.1:+58306938 | MS.gene86824:CDS |
| CGCTGGCTAGTGAGGTGGCT+GGG | 0.428885 | 1.1:-58300758 | None:intergenic |
| AATAGGGTATATTGGGACTT+TGG | 0.430260 | 1.1:+58306955 | MS.gene86824:CDS |
| TGAGATTTCCGATATTGAAA+TGG | 0.430871 | 1.1:+58301148 | MS.gene86824:CDS |
| GCTTGGCGGTTGCGGTGGCG+GGG | 0.437853 | 1.1:-58300662 | None:intergenic |
| TGAGTTGAATTCTGAGGAAA+AGG | 0.445451 | 1.1:+58306895 | MS.gene86824:CDS |
| ATCAGTCTCAAACCCTACTT+TGG | 0.450586 | 1.1:+58301217 | MS.gene86824:CDS |
| GCGCTGGCTAGTGAGGTGGC+TGG | 0.471615 | 1.1:-58300759 | None:intergenic |
| GTCTTCGATACGGTTTCGCT+TGG | 0.476584 | 1.1:-58300679 | None:intergenic |
| GTCTTGTGAGGATGTCAATA+GGG | 0.477443 | 1.1:+58306939 | MS.gene86824:CDS |
| TGAAGCTACCACGTGTTCTC+CGG | 0.481599 | 1.1:-58301048 | None:intergenic |
| ACGGTTTCGCTTGGCGGTTG+CGG | 0.488763 | 1.1:-58300670 | None:intergenic |
| GAAAGGTGTGACGGTGGTGG+TGG | 0.489400 | 1.1:+58301280 | MS.gene86824:CDS |
| ATATTCGCCACCGCCAAAGT+AGG | 0.490127 | 1.1:-58301230 | None:intergenic |
| CTAATAGCATTATGGCCCCT+TGG | 0.496849 | 1.1:-58306520 | None:intergenic |
| ATCCTCCAACTCACCTCCAC+CGG | 0.506127 | 1.1:+58301029 | MS.gene86824:CDS |
| TGTGGATGGTCTTCTAGGCC+AGG | 0.509408 | 1.1:-58306680 | None:intergenic |
| TTTGGCGGTGGCGAATATAC+CGG | 0.512609 | 1.1:+58301235 | MS.gene86824:CDS |
| GTGATTTCGCCGGTGAAGCT+TGG | 0.515648 | 1.1:+58301323 | MS.gene86824:CDS |
| CGACACGAATTTGGCGAACA+CGG | 0.516187 | 1.1:+58300783 | MS.gene86824:CDS |
| TATTATCGAAGGGAAAACTA+AGG | 0.516287 | 1.1:+58301181 | MS.gene86824:CDS |
| GAAATGGAATCAGCTTGAAA+AGG | 0.516409 | 1.1:+58306982 | MS.gene86824:CDS |
| CTAGCAACTGCTACACAAAA+CGG | 0.521813 | 1.1:+58300723 | MS.gene86824:CDS |
| GAATCCCTCACTTAGGCCTA+AGG | 0.525026 | 1.1:+58306585 | MS.gene86824:CDS |
| GTTCTCCGGTGGAGGTGAGT+TGG | 0.527093 | 1.1:-58301034 | None:intergenic |
| CTCCGGTGGAGGTGAGTTGG+AGG | 0.531396 | 1.1:-58301031 | None:intergenic |
| GTTCTTGCTGGAATTTCACC+AGG | 0.532752 | 1.1:+58306917 | MS.gene86824:CDS |
| GGAAATGGCGGACATGCCGC+TGG | 0.533437 | 1.1:-58301000 | None:intergenic |
| TCGGAAAGGTGTGACGGTGG+TGG | 0.537491 | 1.1:+58301277 | MS.gene86824:CDS |
| TTTGGGTTTCGTCTTCGATA+CGG | 0.539866 | 1.1:-58300689 | None:intergenic |
| ATAGCATTATGGCCCCTTGG+TGG | 0.543434 | 1.1:-58306517 | None:intergenic |
| ACATCAGCACCAAGCTTCAC+CGG | 0.543561 | 1.1:-58301332 | None:intergenic |
| CTCAGTAACATTCACCGTCA+TGG | 0.545248 | 1.1:+58300830 | MS.gene86824:CDS |
| TAATTAACAGGAGCAGTATG+TGG | 0.546525 | 1.1:+58306461 | MS.gene86824:intron |
| GGACGGTAGGGTTGAAGTGA+CGG | 0.548416 | 1.1:-58300920 | None:intergenic |
| CTCAAACCCTACTTTGGCGG+TGG | 0.548650 | 1.1:+58301223 | MS.gene86824:CDS |
| GTGGATGGTCTTCTAGGCCA+GGG | 0.553045 | 1.1:-58306679 | None:intergenic |
| CGTCTAATGGCCGCTCTCGA+AGG | 0.553215 | 1.1:+58300954 | MS.gene86824:CDS |
| TATTCGCCACCGCCAAAGTA+GGG | 0.554993 | 1.1:-58301229 | None:intergenic |
| GATTTCAACAATTCATGATG+TGG | 0.554996 | 1.1:-58306698 | None:intergenic |
| TACTCCGATGGTGATTTCGC+CGG | 0.555011 | 1.1:+58301313 | MS.gene86824:CDS |
| GGCTGAGGTTAAGGACGGTA+GGG | 0.556203 | 1.1:-58300932 | None:intergenic |
| AGTCTCAAACCCTACTTTGG+CGG | 0.558714 | 1.1:+58301220 | MS.gene86824:CDS |
| CGGCTGAGGTTAAGGACGGT+AGG | 0.559706 | 1.1:-58300933 | None:intergenic |
| GTTGATGAAGCTATTATCGA+AGG | 0.560149 | 1.1:+58301170 | MS.gene86824:CDS |
| TCAACAATTCATGATGTGGA+TGG | 0.562975 | 1.1:-58306694 | None:intergenic |
| GTTTCGCTTGGCGGTTGCGG+TGG | 0.564473 | 1.1:-58300667 | None:intergenic |
| GGAGGTGAGTTGGAGGATTG+CGG | 0.565483 | 1.1:-58301024 | None:intergenic |
| ACTCTCCGACGCATGTTCGC+CGG | 0.566934 | 1.1:+58300861 | MS.gene86824:CDS |
| TGAGGTGGCTGGGTCGAAGA+CGG | 0.567736 | 1.1:-58300748 | None:intergenic |
| GCCGCTTACTGCACATCCAG+CGG | 0.567953 | 1.1:+58300984 | MS.gene86824:CDS |
| TGTCGAAGTACATCAGTGGT+GGG | 0.570613 | 1.1:+58301369 | MS.gene86824:CDS |
| GCCGCTGGATGTGCAGTAAG+CGG | 0.571507 | 1.1:-58300985 | None:intergenic |
| CCCTTGGTGGAGATCCATCA+TGG | 0.571861 | 1.1:-58306504 | None:intergenic |
| TAGACGAAGAAATCACGGTC+TGG | 0.573430 | 1.1:-58300894 | None:intergenic |
| CTTCGAGAGCGGCCATTAGA+CGG | 0.578957 | 1.1:-58300953 | None:intergenic |
| TGGACTTCTTTGCATTGACA+TGG | 0.579725 | 1.1:+58306748 | MS.gene86824:CDS |
| CCATGATGGATCTCCACCAA+GGG | 0.581063 | 1.1:+58306504 | MS.gene86824:CDS |
| TACCACGTGTTCTCCGGTGG+AGG | 0.582415 | 1.1:-58301042 | None:intergenic |
| GAATATACCGGAGTTATGTA+GGG | 0.582685 | 1.1:+58301247 | MS.gene86824:CDS |
| AACAAAGACTATGGTTATGG+TGG | 0.583091 | 1.1:+58306728 | MS.gene86824:CDS |
| ATTGACATCCTCACAAGACC+TGG | 0.585919 | 1.1:-58306935 | None:intergenic |
| GAATTTCACCAGGTCTTGTG+AGG | 0.587396 | 1.1:+58306927 | MS.gene86824:CDS |
| TGTAGGGTGGCGCATCGGAA+AGG | 0.590254 | 1.1:+58301263 | MS.gene86824:CDS |
| ATGTCGAAGTACATCAGTGG+TGG | 0.590483 | 1.1:+58301368 | MS.gene86824:CDS |
| TCAGAAAGAATCCCTCACTT+AGG | 0.590587 | 1.1:+58306578 | MS.gene86824:CDS |
| GGCGCATCGGAAAGGTGTGA+CGG | 0.593531 | 1.1:+58301271 | MS.gene86824:CDS |
| CATAAGGAAAGTGTCAGCCA+TGG | 0.596216 | 1.1:-58300625 | None:intergenic |
| GGATTCAAGGTAATCTACCC+TGG | 0.598316 | 1.1:+58306662 | MS.gene86824:CDS |
| AGCTACCACGTGTTCTCCGG+TGG | 0.598359 | 1.1:-58301045 | None:intergenic |
| GAGAGTTTCTGGTTCCATGA+CGG | 0.598458 | 1.1:-58300844 | None:intergenic |
| GAGGATTGCGGCGGAAATGG+CGG | 0.601765 | 1.1:-58301012 | None:intergenic |
| ATAAGGAAAGTGTCAGCCAT+GGG | 0.602885 | 1.1:-58300624 | None:intergenic |
| TCGTGCGCTGGCTAGTGAGG+TGG | 0.602922 | 1.1:-58300763 | None:intergenic |
| GTTGTTATGTTGCATGTACG+TGG | 0.609929 | 1.1:-58301116 | None:intergenic |
| TCCATGATGGATCTCCACCA+AGG | 0.615639 | 1.1:+58306503 | MS.gene86824:CDS |
| CGAATTTGGCGAACACGGCG+GGG | 0.616443 | 1.1:+58300788 | MS.gene86824:CDS |
| TCATCCTTAGGCCTAAGTGA+GGG | 0.616919 | 1.1:-58306589 | None:intergenic |
| GATCCATCATGGAATTCACT+AGG | 0.617884 | 1.1:-58306493 | None:intergenic |
| GTAGCTTCAAGAACACTCTA+CGG | 0.618404 | 1.1:+58301062 | MS.gene86824:CDS |
| CACCTCCACCGGAGAACACG+TGG | 0.620711 | 1.1:+58301040 | MS.gene86824:CDS |
| GAGCGGCCATTAGACGGCTG+AGG | 0.624779 | 1.1:-58300947 | None:intergenic |
| TTCATCCTTAGGCCTAAGTG+AGG | 0.628773 | 1.1:-58306590 | None:intergenic |
| AGTTATGTAGGGTGGCGCAT+CGG | 0.629436 | 1.1:+58301258 | MS.gene86824:CDS |
| ATCGGAAATCTCAACGAACG+TGG | 0.632380 | 1.1:-58301138 | None:intergenic |
| GTCGAAGTACATCAGTGGTG+GGG | 0.634074 | 1.1:+58301370 | MS.gene86824:CDS |
| ACTCTCCGGCGAACATGCGT+CGG | 0.635084 | 1.1:-58300866 | None:intergenic |
| GGCTGTAGACGAAGAAATCA+CGG | 0.636097 | 1.1:-58300899 | None:intergenic |
| ACGGTCTGGACCTAACTCTC+CGG | 0.637564 | 1.1:-58300880 | None:intergenic |
| CACGAATTTGGCGAACACGG+CGG | 0.639774 | 1.1:+58300786 | MS.gene86824:CDS |
| GTGTCGTGCGCTGGCTAGTG+AGG | 0.640001 | 1.1:-58300766 | None:intergenic |
| ATGACGGTGAATGTTACTGA+GGG | 0.640177 | 1.1:-58300828 | None:intergenic |
| AATTAACAGGAGCAGTATGT+GGG | 0.640948 | 1.1:+58306462 | MS.gene86824:intron |
| TTGATGAAGCTATTATCGAA+GGG | 0.644569 | 1.1:+58301171 | MS.gene86824:CDS |
| TAGTAGTGAGTTGAATTCTG+AGG | 0.646330 | 1.1:+58306889 | MS.gene86824:CDS |
| CATGACGGTGAATGTTACTG+AGG | 0.648377 | 1.1:-58300829 | None:intergenic |
| TTGTTGCAAACACTAATGCA+CGG | 0.650041 | 1.1:-58306625 | None:intergenic |
| GGCTTCTGTACCTTCGAGAG+CGG | 0.650176 | 1.1:-58300964 | None:intergenic |
| AAGCCTAGTGAATTCCATGA+TGG | 0.650789 | 1.1:+58306490 | MS.gene86824:CDS |
| TGCGCCACCCTACATAACTC+CGG | 0.657885 | 1.1:-58301254 | None:intergenic |
| TTCACCGGCGAAATCACCAT+CGG | 0.669207 | 1.1:-58301317 | None:intergenic |
| TAGACGGCTGAGGTTAAGGA+CGG | 0.676675 | 1.1:-58300937 | None:intergenic |
| GCATCGGAAAGGTGTGACGG+TGG | 0.682253 | 1.1:+58301274 | MS.gene86824:CDS |
| TATACCGGAGTTATGTAGGG+TGG | 0.687231 | 1.1:+58301250 | MS.gene86824:CDS |
| GCTTCAAGAACACTCTACGG+TGG | 0.691366 | 1.1:+58301065 | MS.gene86824:CDS |
| GGTGAGTTGGAGGATTGCGG+CGG | 0.695048 | 1.1:-58301021 | None:intergenic |
| AGTATGTCGAAGTACATCAG+TGG | 0.697208 | 1.1:+58301365 | MS.gene86824:CDS |
| CATGATGGATCTCCACCAAG+GGG | 0.712867 | 1.1:+58306505 | MS.gene86824:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAGAATAAGAAATAAA+AGG | - | chr1.1:58302793-58302812 | None:intergenic | 10.0% |
| !! | AAATTAATAGTATTAATTAG+GGG | + | chr1.1:58304232-58304251 | MS.gene86824:intron | 10.0% |
| !! | TAACAAAAAAAATAAAAAAC+AGG | - | chr1.1:58305581-58305600 | None:intergenic | 10.0% |
| !! | TTATTAAAATTATTCAAAAC+CGG | + | chr1.1:58303139-58303158 | MS.gene86824:intron | 10.0% |
| !! | TTGTAAAAACAAAATTTATT+GGG | + | chr1.1:58302902-58302921 | MS.gene86824:intron | 10.0% |
| !! | TTTGTAAAAACAAAATTTAT+TGG | + | chr1.1:58302901-58302920 | MS.gene86824:intron | 10.0% |
| !!! | AAAAAATGTGATTTTAATTA+AGG | + | chr1.1:58302243-58302262 | MS.gene86824:intron | 10.0% |
| !!! | ATATGAATTTACTTTAAAAA+AGG | - | chr1.1:58304566-58304585 | None:intergenic | 10.0% |
| !!! | TAAAAAATTCTGAATTTTTT+TGG | - | chr1.1:58304650-58304669 | None:intergenic | 10.0% |
| !!! | TATGAATTTACTTTAAAAAA+GGG | - | chr1.1:58304565-58304584 | None:intergenic | 10.0% |
| !!! | TATTTTTTTTTACAAAAAGT+TGG | - | chr1.1:58303978-58303997 | None:intergenic | 10.0% |
| !! | AATAGAAAATTAAGATAAGT+TGG | - | chr1.1:58305868-58305887 | None:intergenic | 15.0% |
| !! | AATTATATCTTGTAAAAGAA+AGG | + | chr1.1:58304431-58304450 | MS.gene86824:intron | 15.0% |
| !! | ATTATATCTTGTAAAAGAAA+GGG | + | chr1.1:58304432-58304451 | MS.gene86824:intron | 15.0% |
| !! | TATGATATGATGATATAAAA+GGG | - | chr1.1:58303718-58303737 | None:intergenic | 15.0% |
| !! | TATTAAAATTATTCAAAACC+GGG | + | chr1.1:58303140-58303159 | MS.gene86824:intron | 15.0% |
| !!! | AAAATTTGTTATGAGAAAAT+TGG | - | chr1.1:58302051-58302070 | None:intergenic | 15.0% |
| !!! | AAAATTTTTAATCTTCCTTT+TGG | + | chr1.1:58304538-58304557 | MS.gene86824:intron | 15.0% |
| !!! | AATATTACACAATTTTTCAA+AGG | + | chr1.1:58303894-58303913 | MS.gene86824:intron | 15.0% |
| !!! | ACTATTTTTTTAAACTCATT+AGG | + | chr1.1:58301702-58301721 | MS.gene86824:intron | 15.0% |
| !!! | AGGAAGATTAAAAATTTTAT+AGG | - | chr1.1:58304536-58304555 | None:intergenic | 15.0% |
| !!! | ATGTTTGATTTTAATTGATT+GGG | + | chr1.1:58302388-58302407 | MS.gene86824:intron | 15.0% |
| !!! | ATTTTAAAACGAAATAATTG+AGG | + | chr1.1:58303109-58303128 | MS.gene86824:intron | 15.0% |
| !!! | GAAAAAAAAATCATGAATTT+TGG | + | chr1.1:58303061-58303080 | MS.gene86824:intron | 15.0% |
| !!! | GGAAGATTAAAAATTTTATA+GGG | - | chr1.1:58304535-58304554 | None:intergenic | 15.0% |
| !!! | TAACAAATTTTCTCATTATT+CGG | + | chr1.1:58302060-58302079 | MS.gene86824:intron | 15.0% |
| !!! | TAAGTTTTTTTTTTTGTTTG+AGG | + | chr1.1:58301851-58301870 | MS.gene86824:intron | 15.0% |
| !!! | TGTATATTTTAAAAGAAATG+AGG | + | chr1.1:58303475-58303494 | MS.gene86824:intron | 15.0% |
| !!! | TTTGTCAACATATTTTTAAA+TGG | + | chr1.1:58301802-58301821 | MS.gene86824:intron | 15.0% |
| !!! | TTTTGTTATGAGAAAATTAT+TGG | + | chr1.1:58303513-58303532 | MS.gene86824:intron | 15.0% |
| !! | AAATTAAGCTACAATCTTAT+TGG | + | chr1.1:58306114-58306133 | MS.gene86824:intron | 20.0% |
| !! | AAGAAATGTGAAAAAAACAA+AGG | - | chr1.1:58304107-58304126 | None:intergenic | 20.0% |
| !! | ACTAAAAAAATTAGGATTCA+AGG | + | chr1.1:58306649-58306668 | MS.gene86824:CDS | 20.0% |
| !! | AGAAATGTGAAAAAAACAAA+GGG | - | chr1.1:58304106-58304125 | None:intergenic | 20.0% |
| !! | CAAATTTAACTATCAAAACA+TGG | + | chr1.1:58302002-58302021 | MS.gene86824:intron | 20.0% |
| !! | CATATAGTAATTTGAAAAGA+GGG | + | chr1.1:58304281-58304300 | MS.gene86824:intron | 20.0% |
| !! | GAAAAGTTGACATATTTATA+GGG | - | chr1.1:58304475-58304494 | None:intergenic | 20.0% |
| !! | GTATGATATGATGATATAAA+AGG | - | chr1.1:58303719-58303738 | None:intergenic | 20.0% |
| !! | TAAGAATAAGAAATAAAAGG+TGG | - | chr1.1:58302790-58302809 | None:intergenic | 20.0% |
| !! | TCCAATGAAAAATTATTGAT+TGG | + | chr1.1:58302469-58302488 | MS.gene86824:intron | 20.0% |
| !! | TTACATCATGATTTCAAATT+CGG | - | chr1.1:58304966-58304985 | None:intergenic | 20.0% |
| !! | TTTATTACACATACAAACAA+AGG | - | chr1.1:58304189-58304208 | None:intergenic | 20.0% |
| !!! | AACATGTGTCATATTTTTAT+TGG | - | chr1.1:58302213-58302232 | None:intergenic | 20.0% |
| !!! | AATAATAAAGGATGTTACTT+TGG | + | chr1.1:58305291-58305310 | MS.gene86824:intron | 20.0% |
| !!! | AATCGAAAGAAAATTTTAGA+AGG | + | chr1.1:58304877-58304896 | MS.gene86824:intron | 20.0% |
| !!! | ACCAATCAATAATTTTTCAT+TGG | - | chr1.1:58302473-58302492 | None:intergenic | 20.0% |
| !!! | ACTTTATGAATTTGATGATT+AGG | + | chr1.1:58305085-58305104 | MS.gene86824:intron | 20.0% |
| !!! | ATAATAAAGGATGTTACTTT+GGG | + | chr1.1:58305292-58305311 | MS.gene86824:intron | 20.0% |
| !!! | CATCCTTTATTATTTCTATT+CGG | - | chr1.1:58305285-58305304 | None:intergenic | 20.0% |
| !!! | GATGTTTGATTTTAATTGAT+TGG | + | chr1.1:58302387-58302406 | MS.gene86824:intron | 20.0% |
| !!! | GGTTTAAATTGATAATTAAC+AGG | + | chr1.1:58306449-58306468 | MS.gene86824:intron | 20.0% |
| !!! | GTCTGTTTTTTATTTCTTTT+CGG | - | chr1.1:58305368-58305387 | None:intergenic | 20.0% |
| !!! | TAGTGGTTGAAAATTTTATA+GGG | + | chr1.1:58304848-58304867 | MS.gene86824:intron | 20.0% |
| !!! | TGTGATTTTAATTAAGGAAA+TGG | + | chr1.1:58302249-58302268 | MS.gene86824:intron | 20.0% |
| !!! | TTGACTATGATTTTTTCTTT+TGG | + | chr1.1:58306425-58306444 | MS.gene86824:intron | 20.0% |
| ! | AAATGTGAAAAAAACAAAGG+GGG | - | chr1.1:58304104-58304123 | None:intergenic | 25.0% |
| ! | AAGTTGAAGGAAAATTTAAG+AGG | - | chr1.1:58304507-58304526 | None:intergenic | 25.0% |
| ! | AATAAGAAATAAAAGGTGGT+GGG | - | chr1.1:58302786-58302805 | None:intergenic | 25.0% |
| ! | AATTATTGGATAGAAGTAAG+TGG | + | chr1.1:58303527-58303546 | MS.gene86824:intron | 25.0% |
| ! | AGTTGAAGGAAAATTTAAGA+GGG | - | chr1.1:58304506-58304525 | None:intergenic | 25.0% |
| ! | CAAATTTAACTATCCAAACA+TGG | + | chr1.1:58301947-58301966 | MS.gene86824:intron | 25.0% |
| ! | CACAGTGATGTTAATTTATT+AGG | - | chr1.1:58303562-58303581 | None:intergenic | 25.0% |
| ! | CATGAGATTCAAATTCAATT+TGG | - | chr1.1:58305814-58305833 | None:intergenic | 25.0% |
| ! | CGAAAAGTTGACATATTTAT+AGG | - | chr1.1:58304476-58304495 | None:intergenic | 25.0% |
| ! | CTTCCGAATAGAAATAATAA+AGG | + | chr1.1:58305279-58305298 | MS.gene86824:intron | 25.0% |
| ! | GAAAATAATTGGATTGAGAT+TGG | + | chr1.1:58303681-58303700 | MS.gene86824:intron | 25.0% |
| ! | GAAATGTGAAAAAAACAAAG+GGG | - | chr1.1:58304105-58304124 | None:intergenic | 25.0% |
| ! | GAAGAAGATAATGAAAAACT+TGG | + | chr1.1:58302988-58303007 | MS.gene86824:intron | 25.0% |
| ! | GCAACAAGACTAAAAAAATT+AGG | + | chr1.1:58306641-58306660 | MS.gene86824:CDS | 25.0% |
| ! | GCATATAGTAATTTGAAAAG+AGG | + | chr1.1:58304280-58304299 | MS.gene86824:intron | 25.0% |
| ! | GGACAAAAGTAAAATCAAAT+GGG | + | chr1.1:58304314-58304333 | MS.gene86824:intron | 25.0% |
| ! | GTCAAATAAAAAAGTAGACA+TGG | + | chr1.1:58302109-58302128 | MS.gene86824:intron | 25.0% |
| ! | GTCTATCTAGAGAAAATAAT+TGG | + | chr1.1:58303670-58303689 | MS.gene86824:intron | 25.0% |
| ! | TAAGGAAATGGAAACATAAA+TGG | + | chr1.1:58302261-58302280 | MS.gene86824:intron | 25.0% |
| ! | TAATATTCAGAAACTAAGGT+GGG | - | chr1.1:58303881-58303900 | None:intergenic | 25.0% |
| ! | TGTGTAATATTCAGAAACTA+AGG | - | chr1.1:58303885-58303904 | None:intergenic | 25.0% |
| ! | TGTTGAATGAAAAAAACCAT+TGG | - | chr1.1:58302757-58302776 | None:intergenic | 25.0% |
| ! | TTCATCAACCATTTCAATAT+CGG | - | chr1.1:58301159-58301178 | None:intergenic | 25.0% |
| ! | TTGGTATTCGTCAAATAAAA+AGG | - | chr1.1:58302119-58302100 | None:intergenic | 25.0% |
| ! | TTTATTGGGATCAATTTCAT+TGG | + | chr1.1:58302916-58302935 | MS.gene86824:intron | 25.0% |
| ! | TTTCTCTATAAATAGAGACT+TGG | - | chr1.1:58303045-58303064 | None:intergenic | 25.0% |
| !! | AAATTCGGATAGTTTCTTTT+AGG | - | chr1.1:58304951-58304970 | None:intergenic | 25.0% |
| !! | AAATTTTCAACCACTACTTT+TGG | - | chr1.1:58304844-58304863 | None:intergenic | 25.0% |
| !! | GAAAGGGTTAAATATGTTTT+TGG | + | chr1.1:58304448-58304467 | MS.gene86824:intron | 25.0% |
| !! | GTAGTGGTTGAAAATTTTAT+AGG | + | chr1.1:58304847-58304866 | MS.gene86824:intron | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | + | chr1.1:58304242-58304261 | MS.gene86824:intron | 25.0% |
| !! | TGAATTTGATGATTAGGATT+AGG | + | chr1.1:58305091-58305110 | MS.gene86824:intron | 25.0% |
| !! | TTCTTTCTAAGAAGCTAAAA+TGG | - | chr1.1:58306348-58306367 | None:intergenic | 25.0% |
| !!! | ACTATGATTTTTTCTTTTGG+TGG | + | chr1.1:58306428-58306447 | MS.gene86824:intron | 25.0% |
| !!! | ATAGTTCAAATGCTATTTTG+GGG | - | chr1.1:58306559-58306578 | None:intergenic | 25.0% |
| !!! | ATATGTGTTGTATTTTGACA+AGG | + | chr1.1:58306398-58306417 | MS.gene86824:intron | 25.0% |
| !!! | GATAGTTCAAATGCTATTTT+GGG | - | chr1.1:58306560-58306579 | None:intergenic | 25.0% |
| !!! | GTGTCATATTTTTATTGGTT+GGG | - | chr1.1:58302208-58302227 | None:intergenic | 25.0% |
| !!! | TAATAAAGGATGTTACTTTG+GGG | + | chr1.1:58305293-58305312 | MS.gene86824:intron | 25.0% |
| !!! | TGATAGTTCAAATGCTATTT+TGG | - | chr1.1:58306561-58306580 | None:intergenic | 25.0% |
| !!! | TGCTAGTTTCTTTTTTGTTT+GGG | - | chr1.1:58300709-58300728 | None:intergenic | 25.0% |
| !!! | TGTCTTCTTACTTTTTCTTT+TGG | + | chr1.1:58306235-58306254 | MS.gene86824:intron | 25.0% |
| !!! | TGTGTCATATTTTTATTGGT+TGG | - | chr1.1:58302209-58302228 | None:intergenic | 25.0% |
| !!! | TTGCTAGTTTCTTTTTTGTT+TGG | - | chr1.1:58300710-58300729 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCACTACAACTTA+TGG | + | chr1.1:58306162-58306181 | MS.gene86824:intron | 25.0% |
| !!! | TTTTTGTTGGTTAAAGAAAG+TGG | + | chr1.1:58302294-58302313 | MS.gene86824:intron | 25.0% |
| AAATTAACATCACTGTGTTG+TGG | + | chr1.1:58303565-58303584 | MS.gene86824:intron | 30.0% | |
| AATATTCAGAAACTAAGGTG+GGG | - | chr1.1:58303880-58303899 | None:intergenic | 30.0% | |
| AATGAAAAAAACCATTGGAG+AGG | - | chr1.1:58302752-58302771 | None:intergenic | 30.0% | |
| AGATATCTGTATGACTGTAT+AGG | - | chr1.1:58304011-58304030 | None:intergenic | 30.0% | |
| AGGAAAATACATTCCAAGTA+TGG | + | chr1.1:58303914-58303933 | MS.gene86824:intron | 30.0% | |
| ATAAGAAATAAAAGGTGGTG+GGG | - | chr1.1:58302785-58302804 | None:intergenic | 30.0% | |
| ATCCATTGCTCATTTCTATT+CGG | - | chr1.1:58305703-58305722 | None:intergenic | 30.0% | |
| ATGAGCTATTTGCAAAACTA+TGG | + | chr1.1:58306797-58306816 | MS.gene86824:CDS | 30.0% | |
| ATGGAAACATAAATGGTGAT+AGG | + | chr1.1:58302268-58302287 | MS.gene86824:intron | 30.0% | |
| ATTAAACAAGCCATTGTAAG+TGG | + | chr1.1:58303412-58303431 | MS.gene86824:intron | 30.0% | |
| CAAAAGTAAAATCAAATGGG+TGG | + | chr1.1:58304317-58304336 | MS.gene86824:intron | 30.0% | |
| CATACAAACAAAGGACAATT+TGG | - | chr1.1:58304180-58304199 | None:intergenic | 30.0% | |
| CATGATGTAATGTATGTATG+TGG | + | chr1.1:58304976-58304995 | MS.gene86824:intron | 30.0% | |
| GAATAAGAAATAAAAGGTGG+TGG | - | chr1.1:58302787-58302806 | None:intergenic | 30.0% | |
| GATGATTAGGATTAGGATTA+AGG | + | chr1.1:58305155-58305174 | MS.gene86824:intron | 30.0% | |
| GATTTCAACAATTCATGATG+TGG | - | chr1.1:58306701-58306720 | None:intergenic | 30.0% | |
| GGAAAATACATTCCAAGTAT+GGG | + | chr1.1:58303915-58303934 | MS.gene86824:intron | 30.0% | |
| GGGACAAAAGTAAAATCAAA+TGG | + | chr1.1:58304313-58304332 | MS.gene86824:intron | 30.0% | |
| GGTTTGTGCAATGAAAAAAT+TGG | + | chr1.1:58302081-58302100 | MS.gene86824:intron | 30.0% | |
| GTAATATTCAGAAACTAAGG+TGG | - | chr1.1:58303882-58303901 | None:intergenic | 30.0% | |
| GTATCTAGACTTCAAGAATA+TGG | + | chr1.1:58307007-58307026 | MS.gene86824:CDS | 30.0% | |
| GTATGTTATGTTACTCAAGT+TGG | + | chr1.1:58305755-58305774 | MS.gene86824:intron | 30.0% | |
| GTGTTGGAAATTGAAAAAGT+GGG | - | chr1.1:58302683-58302702 | None:intergenic | 30.0% | |
| TATTATCGAAGGGAAAACTA+AGG | + | chr1.1:58301181-58301200 | MS.gene86824:CDS | 30.0% | |
| TCAATTCACAACAAAGACTA+TGG | + | chr1.1:58306719-58306738 | MS.gene86824:CDS | 30.0% | |
| TGAAAAGAGGGTTACATTTA+GGG | + | chr1.1:58304293-58304312 | MS.gene86824:intron | 30.0% | |
| TGAGATTTCCGATATTGAAA+TGG | + | chr1.1:58301148-58301167 | MS.gene86824:CDS | 30.0% | |
| TGTTGCAAGTAAAAGGAAAT+GGG | - | chr1.1:58305054-58305073 | None:intergenic | 30.0% | |
| TTAAGAGAGATAAGATGATG+TGG | - | chr1.1:58302707-58302726 | None:intergenic | 30.0% | |
| TTAAGCTACAATCTTATTGG+TGG | + | chr1.1:58306117-58306136 | MS.gene86824:intron | 30.0% | |
| TTATAGGGACTAAAAGTTGA+AGG | - | chr1.1:58304520-58304539 | None:intergenic | 30.0% | |
| TTGAAAAGAGGGTTACATTT+AGG | + | chr1.1:58304292-58304311 | MS.gene86824:intron | 30.0% | |
| TTGATGAAGCTATTATCGAA+GGG | + | chr1.1:58301171-58301190 | MS.gene86824:CDS | 30.0% | |
| TTGCAAAACTATGGACAATT+TGG | + | chr1.1:58306806-58306825 | MS.gene86824:CDS | 30.0% | |
| ! | ACTTTAAAAAAGGGACCAAA+AGG | - | chr1.1:58304556-58304575 | None:intergenic | 30.0% |
| ! | AGTGTTGGAAATTGAAAAAG+TGG | - | chr1.1:58302684-58302703 | None:intergenic | 30.0% |
| ! | ATGCATTTTATGCCAAATCT+AGG | + | chr1.1:58301910-58301929 | MS.gene86824:intron | 30.0% |
| ! | TGCATTTTATGCCAAATCTA+GGG | + | chr1.1:58301911-58301930 | MS.gene86824:intron | 30.0% |
| ! | TTTTTCACTACAACTTATGG+TGG | + | chr1.1:58306165-58306184 | MS.gene86824:intron | 30.0% |
| !! | AATAAAGGATGTTACTTTGG+GGG | + | chr1.1:58305294-58305313 | MS.gene86824:intron | 30.0% |
| !! | ATGAAAAGCATTACCATGTT+TGG | - | chr1.1:58301963-58301982 | None:intergenic | 30.0% |
| !!! | AATTTTTTTGGGGAGATATC+TGG | + | chr1.1:58305634-58305653 | MS.gene86824:intron | 30.0% |
| !!! | CGTTTTAATTGGTCCTTTTT+TGG | - | chr1.1:58303270-58303289 | None:intergenic | 30.0% |
| AAAATAGGGACCAAAAGTAG+TGG | + | chr1.1:58304831-58304850 | MS.gene86824:intron | 35.0% | |
| AACAAAGACTATGGTTATGG+TGG | + | chr1.1:58306728-58306747 | MS.gene86824:CDS | 35.0% | |
| AACAAAGGGGGATTACATTA+AGG | - | chr1.1:58304092-58304111 | None:intergenic | 35.0% | |
| AATAGGGTATATTGGGACTT+TGG | + | chr1.1:58306955-58306974 | MS.gene86824:CDS | 35.0% | |
| AATTAACAGGAGCAGTATGT+GGG | + | chr1.1:58306462-58306481 | MS.gene86824:intron | 35.0% | |
| ACAAAGGGGGATTACATTAA+GGG | - | chr1.1:58304091-58304110 | None:intergenic | 35.0% | |
| ACAGGCATTAAACAAACCAT+TGG | + | chr1.1:58303364-58303383 | MS.gene86824:intron | 35.0% | |
| AGGATGTCAATAGGGTATAT+TGG | + | chr1.1:58306947-58306966 | MS.gene86824:CDS | 35.0% | |
| AGGCTCCATTTATTATCAGT+GGG | - | chr1.1:58305561-58305580 | None:intergenic | 35.0% | |
| AGGTATTTGATTCCAGACTT+GGG | + | chr1.1:58302612-58302631 | MS.gene86824:intron | 35.0% | |
| ATATTCAGAAACTAAGGTGG+GGG | - | chr1.1:58303879-58303898 | None:intergenic | 35.0% | |
| ATGGGAATTCAACCACTAAA+TGG | - | chr1.1:58305523-58305542 | None:intergenic | 35.0% | |
| ATGTGTTATAGCCCTAGATT+TGG | - | chr1.1:58301925-58301944 | None:intergenic | 35.0% | |
| ATTCGTGAGGGGAAAATAAA+CGG | - | chr1.1:58305495-58305514 | None:intergenic | 35.0% | |
| CAAATGGGTGGTTACATTAA+GGG | + | chr1.1:58304329-58304348 | MS.gene86824:intron | 35.0% | |
| CACAACAAAGACTATGGTTA+TGG | + | chr1.1:58306725-58306744 | MS.gene86824:CDS | 35.0% | |
| CAGGCATTAAACAAACCATT+GGG | + | chr1.1:58303365-58303384 | MS.gene86824:intron | 35.0% | |
| CATGGCTCACTGATAATAAA+TGG | - | chr1.1:58305392-58305411 | None:intergenic | 35.0% | |
| CATTAAACAAACCATTGGGA+TGG | + | chr1.1:58303369-58303388 | MS.gene86824:intron | 35.0% | |
| CATTTATTATCAGTGAGCCA+TGG | + | chr1.1:58305390-58305409 | MS.gene86824:intron | 35.0% | |
| CGAAAAACAACGATTGTTCA+CGG | - | chr1.1:58305026-58305045 | None:intergenic | 35.0% | |
| CTTCTTGTGCTGAAAATGAA+AGG | + | chr1.1:58306305-58306324 | MS.gene86824:intron | 35.0% | |
| GAAAAACAACGATTGTTCAC+GGG | - | chr1.1:58305025-58305044 | None:intergenic | 35.0% | |
| GAAATGGAATCAGCTTGAAA+AGG | + | chr1.1:58306982-58307001 | MS.gene86824:CDS | 35.0% | |
| GAACATTGAAACCCATTTAG+TGG | - | chr1.1:58305437-58305456 | None:intergenic | 35.0% | |
| GAATATACCGGAGTTATGTA+GGG | + | chr1.1:58301247-58301266 | MS.gene86824:CDS | 35.0% | |
| GGATGATAGAGAAGATGAAT+CGG | - | chr1.1:58303331-58303350 | None:intergenic | 35.0% | |
| GGATGTCAATAGGGTATATT+GGG | + | chr1.1:58306948-58306967 | MS.gene86824:CDS | 35.0% | |
| GGGTGTAAGAATAATCTCTT+AGG | - | chr1.1:58302188-58302207 | None:intergenic | 35.0% | |
| GTGTTGCAAGTAAAAGGAAA+TGG | - | chr1.1:58305055-58305074 | None:intergenic | 35.0% | |
| GTTTCAATGTTCATTCGTGA+GGG | + | chr1.1:58305445-58305464 | MS.gene86824:intron | 35.0% | |
| TAACACGTGTTGCAAGTAAA+AGG | - | chr1.1:58305061-58305080 | None:intergenic | 35.0% | |
| TAATTAACAGGAGCAGTATG+TGG | + | chr1.1:58306461-58306480 | MS.gene86824:intron | 35.0% | |
| TCAAATGGGTGGTTACATTA+AGG | + | chr1.1:58304328-58304347 | MS.gene86824:intron | 35.0% | |
| TCAACAATTCATGATGTGGA+TGG | - | chr1.1:58306697-58306716 | None:intergenic | 35.0% | |
| TGCTATGTTCTTTCATCCTT+AGG | - | chr1.1:58306604-58306623 | None:intergenic | 35.0% | |
| TGGGAATTCAACCACTAAAT+GGG | - | chr1.1:58305522-58305541 | None:intergenic | 35.0% | |
| TGTTGGTCCTAATAGCATTA+TGG | - | chr1.1:58306531-58306550 | None:intergenic | 35.0% | |
| TTCAACTTTAACCTCTCCAA+TGG | + | chr1.1:58302738-58302757 | MS.gene86824:intron | 35.0% | |
| TTCCGAATAGAAATGAGCAA+TGG | + | chr1.1:58305698-58305717 | MS.gene86824:intron | 35.0% | |
| TTCTCTTAGACCACTTACAA+TGG | - | chr1.1:58303425-58303444 | None:intergenic | 35.0% | |
| TTGGGAATCACTTTGTATTG+AGG | + | chr1.1:58306206-58306225 | MS.gene86824:intron | 35.0% | |
| TTGTTGCAAACACTAATGCA+CGG | - | chr1.1:58306628-58306647 | None:intergenic | 35.0% | |
| ! | AAGGTATTTGATTCCAGACT+TGG | + | chr1.1:58302611-58302630 | MS.gene86824:intron | 35.0% |
| ! | ACAAGAAGTGTGGAAAATTC+AGG | - | chr1.1:58306293-58306312 | None:intergenic | 35.0% |
| ! | AGCTTGTGTTTTCAACCTTA+AGG | + | chr1.1:58302592-58302611 | MS.gene86824:intron | 35.0% |
| ! | ATTTTCTCTAGATAGACCCA+AGG | - | chr1.1:58303667-58303686 | None:intergenic | 35.0% |
| ! | CGGTTATAGCTAAATTTTCC+CGG | - | chr1.1:58305348-58305367 | None:intergenic | 35.0% |
| ! | CTATGGACAATTTGGTTTCA+TGG | + | chr1.1:58306814-58306833 | MS.gene86824:CDS | 35.0% |
| ! | GAAACACTTATGTCTTGTTC+TGG | + | chr1.1:58306857-58306876 | MS.gene86824:CDS | 35.0% |
| ! | GAGACTTGGTTCATTTGATT+TGG | - | chr1.1:58303031-58303050 | None:intergenic | 35.0% |
| ! | GGATAATACTTTTACTCCGA+TGG | + | chr1.1:58301301-58301320 | MS.gene86824:CDS | 35.0% |
| ! | GGTTATAGCTAAATTTTCCC+GGG | - | chr1.1:58305347-58305366 | None:intergenic | 35.0% |
| ! | GTCTGGAATCAAATACCTTA+AGG | - | chr1.1:58302610-58302629 | None:intergenic | 35.0% |
| ! | GTTGATGAAGCTATTATCGA+AGG | + | chr1.1:58301170-58301189 | MS.gene86824:CDS | 35.0% |
| ! | TAAATGGGTTTCATTCGTGA+GGG | - | chr1.1:58305507-58305526 | None:intergenic | 35.0% |
| ! | TAGTAGTGAGTTGAATTCTG+AGG | + | chr1.1:58306889-58306908 | MS.gene86824:CDS | 35.0% |
| ! | TGAGTTGAATTCTGAGGAAA+AGG | + | chr1.1:58306895-58306914 | MS.gene86824:CDS | 35.0% |
| !! | AAGAATTCTGGAATGATGGA+GGG | - | chr1.1:58303191-58303210 | None:intergenic | 35.0% |
| !! | ATGTTGGTGACCATTGTAAA+TGG | - | chr1.1:58302644-58302663 | None:intergenic | 35.0% |
| !! | ATTGAAAAAGTGGGTGTTGA+AGG | - | chr1.1:58302674-58302693 | None:intergenic | 35.0% |
| !! | GAAGAAGAATTCTGGAATGA+TGG | - | chr1.1:58303195-58303214 | None:intergenic | 35.0% |
| !! | GTTACTCAAGTTGGTAAAGT+TGG | + | chr1.1:58305764-58305783 | MS.gene86824:intron | 35.0% |
| !! | TGTTGAAGGGTGTTTAATGT+TGG | - | chr1.1:58302660-58302679 | None:intergenic | 35.0% |
| !! | TTGAAAAAGTGGGTGTTGAA+GGG | - | chr1.1:58302673-58302692 | None:intergenic | 35.0% |
| !!! | AAAGCTCGGGACAATTTTTT+TGG | + | chr1.1:58305622-58305641 | MS.gene86824:intron | 35.0% |
| !!! | AAGCTCGGGACAATTTTTTT+GGG | + | chr1.1:58305623-58305642 | MS.gene86824:intron | 35.0% |
| !!! | TGGTGATAGGTGTTTTTTGT+TGG | + | chr1.1:58302281-58302300 | MS.gene86824:intron | 35.0% |
| !!! | TTTCCCGGGACAATTTTTTT+CGG | - | chr1.1:58305333-58305352 | None:intergenic | 35.0% |
| AACAGCAAATTCCATCCCAA+TGG | - | chr1.1:58303383-58303402 | None:intergenic | 40.0% | |
| AAGCCTAGTGAATTCCATGA+TGG | + | chr1.1:58306490-58306509 | MS.gene86824:CDS | 40.0% | |
| AATTGGATTGAGATTGGACG+TGG | + | chr1.1:58303687-58303706 | MS.gene86824:intron | 40.0% | |
| AGTATGTCGAAGTACATCAG+TGG | + | chr1.1:58301365-58301384 | MS.gene86824:CDS | 40.0% | |
| ATCAGTCTCAAACCCTACTT+TGG | + | chr1.1:58301217-58301236 | MS.gene86824:CDS | 40.0% | |
| ATGACGAATGGCTTCAAGTA+TGG | - | chr1.1:58305671-58305690 | None:intergenic | 40.0% | |
| ATGACGGTGAATGTTACTGA+GGG | - | chr1.1:58300831-58300850 | None:intergenic | 40.0% | |
| ATGCCTGTTGAAAACAGACA+TGG | - | chr1.1:58303352-58303371 | None:intergenic | 40.0% | |
| ATGGGAATTCAGCCACTAAA+TGG | + | chr1.1:58305422-58305441 | MS.gene86824:intron | 40.0% | |
| ATTCCCATTAGTTCACCACT+TGG | + | chr1.1:58303772-58303791 | MS.gene86824:intron | 40.0% | |
| CACGAATGAAACCCATTTAG+TGG | + | chr1.1:58305508-58305527 | MS.gene86824:intron | 40.0% | |
| CAGGCTCCATTTATTATCAG+TGG | - | chr1.1:58305562-58305581 | None:intergenic | 40.0% | |
| CATAGATGACGAACTTCCTT+GGG | + | chr1.1:58303648-58303667 | MS.gene86824:intron | 40.0% | |
| CATGGCCCACTGATAATAAA+TGG | + | chr1.1:58305553-58305572 | MS.gene86824:intron | 40.0% | |
| CATTTATTATCAGTGGGCCA+TGG | - | chr1.1:58305555-58305574 | None:intergenic | 40.0% | |
| CGAATATACCGGAGTTATGT+AGG | + | chr1.1:58301246-58301265 | MS.gene86824:CDS | 40.0% | |
| CTAGCAACTGCTACACAAAA+CGG | + | chr1.1:58300723-58300742 | MS.gene86824:CDS | 40.0% | |
| GACGCAGTTGTTAACCAAAT+GGG | - | chr1.1:58306026-58306045 | None:intergenic | 40.0% | |
| GATAAGATGATGTGGAGTGT+TGG | - | chr1.1:58302699-58302718 | None:intergenic | 40.0% | |
| GATCCATCATGGAATTCACT+AGG | - | chr1.1:58306496-58306515 | None:intergenic | 40.0% | |
| GCAAGTAAAAGGAAATGGGT+AGG | - | chr1.1:58305050-58305069 | None:intergenic | 40.0% | |
| GGGTGTAAGAATGATCTCTT+AGG | + | chr1.1:58302408-58302427 | MS.gene86824:intron | 40.0% | |
| GGTTAGATGGGATAGTTGTT+TGG | - | chr1.1:58303836-58303855 | None:intergenic | 40.0% | |
| GGTTTCAATGTTCATTCGTG+AGG | + | chr1.1:58305444-58305463 | MS.gene86824:intron | 40.0% | |
| GTAGCTTCAAGAACACTCTA+CGG | + | chr1.1:58301062-58301081 | MS.gene86824:CDS | 40.0% | |
| GTCTTGTGAGGATGTCAATA+GGG | + | chr1.1:58306939-58306958 | MS.gene86824:CDS | 40.0% | |
| GTGATTCCCAAACAAGCTAA+CGG | - | chr1.1:58306197-58306216 | None:intergenic | 40.0% | |
| GTTGTTATGTTGCATGTACG+TGG | - | chr1.1:58301119-58301138 | None:intergenic | 40.0% | |
| TCAGAAAGAATCCCTCACTT+AGG | + | chr1.1:58306578-58306597 | MS.gene86824:CDS | 40.0% | |
| TCTCCCGAAAAAAATTGTCC+CGG | + | chr1.1:58305326-58305345 | MS.gene86824:intron | 40.0% | |
| TGACCATACCACCATATCAT+CGG | + | chr1.1:58303796-58303815 | MS.gene86824:intron | 40.0% | |
| TGACGAATGGCTTCAAGTAT+GGG | - | chr1.1:58305670-58305689 | None:intergenic | 40.0% | |
| TGATTCCCAAACAAGCTAAC+GGG | - | chr1.1:58306196-58306215 | None:intergenic | 40.0% | |
| TGGGAATTCAGCCACTAAAT+GGG | + | chr1.1:58305423-58305442 | MS.gene86824:intron | 40.0% | |
| TGGTTTCATGGCTGTTAGTT+TGG | + | chr1.1:58306826-58306845 | MS.gene86824:CDS | 40.0% | |
| TTCAACTCACTCCGATGATA+TGG | - | chr1.1:58303810-58303829 | None:intergenic | 40.0% | |
| TTCCCATTAGTTCACCACTT+GGG | + | chr1.1:58303773-58303792 | MS.gene86824:intron | 40.0% | |
| TTCGTCATCTATGGTCTCAT+CGG | - | chr1.1:58303641-58303660 | None:intergenic | 40.0% | |
| TTCGTGAGGGGAAAATAAAC+GGG | - | chr1.1:58305494-58305513 | None:intergenic | 40.0% | |
| ! | AAATGGGTTTCATTCGTGAG+GGG | - | chr1.1:58305506-58305525 | None:intergenic | 40.0% |
| ! | ATTTTCCCATCGTGAAAGCT+CGG | + | chr1.1:58305608-58305627 | MS.gene86824:intron | 40.0% |
| ! | CATCCATGTCTGTTTTCAAC+AGG | + | chr1.1:58303346-58303365 | MS.gene86824:intron | 40.0% |
| ! | CATTTTCAGCACAAGAAGTG+TGG | - | chr1.1:58306303-58306322 | None:intergenic | 40.0% |
| ! | CTAAATGGGTTTCATTCGTG+AGG | - | chr1.1:58305508-58305527 | None:intergenic | 40.0% |
| ! | GAATGAATGTGGATGGATTC+TGG | - | chr1.1:58303857-58303876 | None:intergenic | 40.0% |
| ! | GGTTTCATGGCTGTTAGTTT+GGG | + | chr1.1:58306827-58306846 | MS.gene86824:CDS | 40.0% |
| ! | TGGACTTCTTTGCATTGACA+TGG | + | chr1.1:58306748-58306767 | MS.gene86824:CDS | 40.0% |
| ! | TGGATGGATTCTGGTTAGAT+GGG | - | chr1.1:58303848-58303867 | None:intergenic | 40.0% |
| ! | TTTGGGTTTCGTCTTCGATA+CGG | - | chr1.1:58300692-58300711 | None:intergenic | 40.0% |
| !! | CTTAACCCGTTAGCTTGTTT+GGG | + | chr1.1:58306188-58306207 | MS.gene86824:intron | 40.0% |
| !! | GAAGAATTCTGGAATGATGG+AGG | - | chr1.1:58303192-58303211 | None:intergenic | 40.0% |
| !! | TATGGTCTCATCGGTTCAAA+GGG | - | chr1.1:58303632-58303651 | None:intergenic | 40.0% |
| !!! | AGCTCGGGACAATTTTTTTG+GGG | + | chr1.1:58305624-58305643 | MS.gene86824:intron | 40.0% |
| !!! | GCTATTTTGGGGTTCATTGT+TGG | - | chr1.1:58306548-58306567 | None:intergenic | 40.0% |
| !!! | GTGCTACTTTTCAACCCATT+TGG | + | chr1.1:58306009-58306028 | MS.gene86824:intron | 40.0% |
| !!! | TTCCCGGGACAATTTTTTTC+GGG | - | chr1.1:58305332-58305351 | None:intergenic | 40.0% |
| AACTCACTCCGATGATATGG+TGG | - | chr1.1:58303807-58303826 | None:intergenic | 45.0% | |
| ACTCCGATGATATGGTGGTA+TGG | - | chr1.1:58303802-58303821 | None:intergenic | 45.0% | |
| AGGGGGATTACATTAAGGGA+CGG | - | chr1.1:58304087-58304106 | None:intergenic | 45.0% | |
| AGTCTCAAACCCTACTTTGG+CGG | + | chr1.1:58301220-58301239 | MS.gene86824:CDS | 45.0% | |
| ATCGGAAATCTCAACGAACG+TGG | - | chr1.1:58301141-58301160 | None:intergenic | 45.0% | |
| ATGGAATTCACTAGGCTTGC+AGG | - | chr1.1:58306488-58306507 | None:intergenic | 45.0% | |
| ATGTCGAAGTACATCAGTGG+TGG | + | chr1.1:58301368-58301387 | MS.gene86824:CDS | 45.0% | |
| ATTCCCATGTATTGTGGCCA+TGG | - | chr1.1:58305410-58305429 | None:intergenic | 45.0% | |
| ATTGACATCCTCACAAGACC+TGG | - | chr1.1:58306938-58306957 | None:intergenic | 45.0% | |
| CAAGGGGCCATAATGCTATT+AGG | + | chr1.1:58306521-58306540 | MS.gene86824:CDS | 45.0% | |
| CACCCAAGTGGTGAACTAAT+GGG | - | chr1.1:58303778-58303797 | None:intergenic | 45.0% | |
| CATGACGGTGAATGTTACTG+AGG | - | chr1.1:58300832-58300851 | None:intergenic | 45.0% | |
| CATGATGTGGATGGTCTTCT+AGG | - | chr1.1:58306688-58306707 | None:intergenic | 45.0% | |
| CCAAGGAAGTTCGTCATCTA+TGG | - | chr1.1:58303650-58303669 | None:intergenic | 45.0% | |
| CCATAGATGACGAACTTCCT+TGG | + | chr1.1:58303647-58303666 | MS.gene86824:intron | 45.0% | |
| CGACGCAGTTGTTAACCAAA+TGG | - | chr1.1:58306027-58306046 | None:intergenic | 45.0% | |
| CGGAGAGAGAAGAAGAATTC+TGG | - | chr1.1:58303203-58303222 | None:intergenic | 45.0% | |
| CTAATAGCATTATGGCCCCT+TGG | - | chr1.1:58306523-58306542 | None:intergenic | 45.0% | |
| CTCAGTAACATTCACCGTCA+TGG | + | chr1.1:58300830-58300849 | MS.gene86824:CDS | 45.0% | |
| CTCCCGAAAAAAATTGTCCC+GGG | + | chr1.1:58305327-58305346 | MS.gene86824:intron | 45.0% | |
| GACGAATGGCTTCAAGTATG+GGG | - | chr1.1:58305669-58305688 | None:intergenic | 45.0% | |
| GGATTACATTAAGGGACGGA+GGG | - | chr1.1:58304083-58304102 | None:intergenic | 45.0% | |
| GGATTCAAGGTAATCTACCC+TGG | + | chr1.1:58306662-58306681 | MS.gene86824:CDS | 45.0% | |
| GGCTGAATTCCCATGTATTG+TGG | - | chr1.1:58305416-58305435 | None:intergenic | 45.0% | |
| GGCTGTAGACGAAGAAATCA+CGG | - | chr1.1:58300902-58300921 | None:intergenic | 45.0% | |
| GGTTGAATTCCCATGTATCG+TGG | + | chr1.1:58305529-58305548 | MS.gene86824:intron | 45.0% | |
| GTCGAATCTAGACCCATACT+TGG | - | chr1.1:58303930-58303949 | None:intergenic | 45.0% | |
| GTTCTTGCTGGAATTTCACC+AGG | + | chr1.1:58306917-58306936 | MS.gene86824:CDS | 45.0% | |
| TAACAACTGCGTCGTTGATC+TGG | + | chr1.1:58306033-58306052 | MS.gene86824:intron | 45.0% | |
| TAGACGAAGAAATCACGGTC+TGG | - | chr1.1:58300897-58300916 | None:intergenic | 45.0% | |
| TATACCGGAGTTATGTAGGG+TGG | + | chr1.1:58301250-58301269 | MS.gene86824:CDS | 45.0% | |
| TCACCCAAGTGGTGAACTAA+TGG | - | chr1.1:58303779-58303798 | None:intergenic | 45.0% | |
| TCATCCTTAGGCCTAAGTGA+GGG | - | chr1.1:58306592-58306611 | None:intergenic | 45.0% | |
| TCTGAGGAAAAGGTTCTTGC+TGG | + | chr1.1:58306905-58306924 | MS.gene86824:CDS | 45.0% | |
| TGGGTGGTTACATTAAGGGA+CGG | + | chr1.1:58304333-58304352 | MS.gene86824:intron | 45.0% | |
| TGGTTACATTAAGGGACGGA+GGG | + | chr1.1:58304337-58304356 | MS.gene86824:intron | 45.0% | |
| TGTCGAAGTACATCAGTGGT+GGG | + | chr1.1:58301369-58301388 | MS.gene86824:CDS | 45.0% | |
| TTCATCCTTAGGCCTAAGTG+AGG | - | chr1.1:58306593-58306612 | None:intergenic | 45.0% | |
| ! | GAATTTCACCAGGTCTTGTG+AGG | + | chr1.1:58306927-58306946 | MS.gene86824:CDS | 45.0% |
| ! | GGTCTTGTGAGGATGTCAAT+AGG | + | chr1.1:58306938-58306957 | MS.gene86824:CDS | 45.0% |
| ! | GTGGATGGATTCTGGTTAGA+TGG | - | chr1.1:58303849-58303868 | None:intergenic | 45.0% |
| ! | TTTTCCCATCGTGAAAGCTC+GGG | + | chr1.1:58305609-58305628 | MS.gene86824:intron | 45.0% |
| !! | ATGGTCTCATCGGTTCAAAG+GGG | - | chr1.1:58303631-58303650 | None:intergenic | 45.0% |
| !! | CTATGGTCTCATCGGTTCAA+AGG | - | chr1.1:58303633-58303652 | None:intergenic | 45.0% |
| !! | GACACGTGGTGCTACTTTAT+TGG | - | chr1.1:58303169-58303188 | None:intergenic | 45.0% |
| !! | GAGAGTTTCTGGTTCCATGA+CGG | - | chr1.1:58300847-58300866 | None:intergenic | 45.0% |
| !! | GCTTAACCCGTTAGCTTGTT+TGG | + | chr1.1:58306187-58306206 | MS.gene86824:intron | 45.0% |
| !! | GTGCTACTTTATTGGATGCC+CGG | - | chr1.1:58303161-58303180 | None:intergenic | 45.0% |
| !! | TGGGCATCGACCATTTACAA+TGG | + | chr1.1:58302631-58302650 | MS.gene86824:intron | 45.0% |
| !! | TTGGGACTTTGGAGCAGAAA+TGG | + | chr1.1:58306966-58306985 | MS.gene86824:CDS | 45.0% |
| !! | ATAAATTAATAGTATTAATT+AGG | + | chr1.1:58304230-58304249 | MS.gene86824:intron | 5.0% |
| !! | ATGATAATTTAATAATATTT+AGG | - | chr1.1:58303750-58303769 | None:intergenic | 5.0% |
| !! | ATTTAATAATTTAGTATATA+CGG | - | chr1.1:58301587-58301606 | None:intergenic | 5.0% |
| !! | TAAATTAATAGTATTAATTA+GGG | + | chr1.1:58304231-58304250 | MS.gene86824:intron | 5.0% |
| !!! | AAAAAATTCTAATTTTTTTT+AGG | + | chr1.1:58304742-58304761 | MS.gene86824:intron | 5.0% |
| !!! | ACAAAAATTAAATTTAAAAT+AGG | + | chr1.1:58304816-58304835 | MS.gene86824:intron | 5.0% |
| !!! | ATGAATTTTTATATTTTTTA+CGG | + | chr1.1:58304688-58304707 | MS.gene86824:intron | 5.0% |
| !!! | ATTTATTATTATACATTTTA+AGG | - | chr1.1:58304414-58304433 | None:intergenic | 5.0% |
| !!! | CAAAAATTAAATTTAAAATA+GGG | + | chr1.1:58304817-58304836 | MS.gene86824:intron | 5.0% |
| AAATGGTCGATGCCCAAGTC+TGG | - | chr1.1:58302627-58302646 | None:intergenic | 50.0% | |
| AACATGCGTCGGAGAGTTTC+TGG | - | chr1.1:58300858-58300877 | None:intergenic | 50.0% | |
| AACGATTGTTCACGGGAGTC+TGG | - | chr1.1:58305018-58305037 | None:intergenic | 50.0% | |
| ACATCAGCACCAAGCTTCAC+CGG | - | chr1.1:58301335-58301354 | None:intergenic | 50.0% | |
| ACCAATTAAAACGCGACGCG+TGG | + | chr1.1:58303277-58303296 | MS.gene86824:intron | 50.0% | |
| AGTTATGTAGGGTGGCGCAT+CGG | + | chr1.1:58301258-58301277 | MS.gene86824:CDS | 50.0% | |
| ATAGCATTATGGCCCCTTGG+TGG | - | chr1.1:58306520-58306539 | None:intergenic | 50.0% | |
| ATATTCGCCACCGCCAAAGT+AGG | - | chr1.1:58301233-58301252 | None:intergenic | 50.0% | |
| ATTCCCATGTATCGTGGCCA+TGG | + | chr1.1:58305535-58305554 | MS.gene86824:intron | 50.0% | |
| ATTGTCCCGAGCTTTCACGA+TGG | - | chr1.1:58305617-58305636 | None:intergenic | 50.0% | |
| CCATTAGACGGCTGAGGTTA+AGG | - | chr1.1:58300944-58300963 | None:intergenic | 50.0% | |
| CCTTAACCTCAGCCGTCTAA+TGG | + | chr1.1:58300941-58300960 | MS.gene86824:CDS | 50.0% | |
| CGACACGAATTTGGCGAACA+CGG | + | chr1.1:58300783-58300802 | MS.gene86824:CDS | 50.0% | |
| CTAAGGTGGGGGAATGAATG+TGG | - | chr1.1:58303868-58303887 | None:intergenic | 50.0% | |
| GAATCCCTCACTTAGGCCTA+AGG | + | chr1.1:58306585-58306604 | MS.gene86824:CDS | 50.0% | |
| GAGCCATGGCCACAATACAT+GGG | + | chr1.1:58305404-58305423 | MS.gene86824:intron | 50.0% | |
| GCTTCAAGAACACTCTACGG+TGG | + | chr1.1:58301065-58301084 | MS.gene86824:CDS | 50.0% | |
| GGGATTACATTAAGGGACGG+AGG | - | chr1.1:58304084-58304103 | None:intergenic | 50.0% | |
| GTCGAAGTACATCAGTGGTG+GGG | + | chr1.1:58301370-58301389 | MS.gene86824:CDS | 50.0% | |
| GTCTTCGATACGGTTTCGCT+TGG | - | chr1.1:58300682-58300701 | None:intergenic | 50.0% | |
| GTGGTTACATTAAGGGACGG+AGG | + | chr1.1:58304336-58304355 | MS.gene86824:intron | 50.0% | |
| TACTCCGATGGTGATTTCGC+CGG | + | chr1.1:58301313-58301332 | MS.gene86824:CDS | 50.0% | |
| TAGACGGCTGAGGTTAAGGA+CGG | - | chr1.1:58300940-58300959 | None:intergenic | 50.0% | |
| TATTCGCCACCGCCAAAGTA+GGG | - | chr1.1:58301232-58301251 | None:intergenic | 50.0% | |
| TGAAGCTACCACGTGTTCTC+CGG | - | chr1.1:58301051-58301070 | None:intergenic | 50.0% | |
| TGAGCCATGGCCACAATACA+TGG | + | chr1.1:58305403-58305422 | MS.gene86824:intron | 50.0% | |
| TGTGCTACACGCGCCAAAAA+AGG | + | chr1.1:58303254-58303273 | MS.gene86824:intron | 50.0% | |
| TTCACCGGCGAAATCACCAT+CGG | - | chr1.1:58301320-58301339 | None:intergenic | 50.0% | |
| TTCGATACGGTTTCGCTTGG+CGG | - | chr1.1:58300679-58300698 | None:intergenic | 50.0% | |
| TTGTCCCGAGCTTTCACGAT+GGG | - | chr1.1:58305616-58305635 | None:intergenic | 50.0% | |
| TTTGGCGGTGGCGAATATAC+CGG | + | chr1.1:58301235-58301254 | MS.gene86824:CDS | 50.0% | |
| !! | CATGATGGATCTCCACCAAG+GGG | + | chr1.1:58306505-58306524 | MS.gene86824:CDS | 50.0% |
| !! | CCATGATGGATCTCCACCAA+GGG | + | chr1.1:58306504-58306523 | MS.gene86824:CDS | 50.0% |
| !! | CGGAAGTGCTTGATGACGAA+TGG | - | chr1.1:58305265-58305284 | None:intergenic | 50.0% |
| !! | TCCATGATGGATCTCCACCA+AGG | + | chr1.1:58306503-58306522 | MS.gene86824:CDS | 50.0% |
| !! | TGGTCTCATCGGTTCAAAGG+GGG | - | chr1.1:58303630-58303649 | None:intergenic | 50.0% |
| ACACGGCGTGTGAAAAGCAG+AGG | - | chr1.1:58303227-58303246 | None:intergenic | 55.0% | |
| ACGAATTTGGCGAACACGGC+GGG | + | chr1.1:58300787-58300806 | MS.gene86824:CDS | 55.0% | |
| ACGGTCTGGACCTAACTCTC+CGG | - | chr1.1:58300883-58300902 | None:intergenic | 55.0% | |
| ATCCTCCAACTCACCTCCAC+CGG | + | chr1.1:58301029-58301048 | MS.gene86824:CDS | 55.0% | |
| CACGAATTTGGCGAACACGG+CGG | + | chr1.1:58300786-58300805 | MS.gene86824:CDS | 55.0% | |
| CCCTTGGTGGAGATCCATCA+TGG | - | chr1.1:58306507-58306526 | None:intergenic | 55.0% | |
| CTCAAACCCTACTTTGGCGG+TGG | + | chr1.1:58301223-58301242 | MS.gene86824:CDS | 55.0% | |
| CTTCGAGAGCGGCCATTAGA+CGG | - | chr1.1:58300956-58300975 | None:intergenic | 55.0% | |
| GGACGGTAGGGTTGAAGTGA+CGG | - | chr1.1:58300923-58300942 | None:intergenic | 55.0% | |
| GGCGTGTGAAAAGCAGAGGA+CGG | - | chr1.1:58303223-58303242 | None:intergenic | 55.0% | |
| GGCTGAGGTTAAGGACGGTA+GGG | - | chr1.1:58300935-58300954 | None:intergenic | 55.0% | |
| GGCTTCTGTACCTTCGAGAG+CGG | - | chr1.1:58300967-58300986 | None:intergenic | 55.0% | |
| GGTGGGGCAGATATCATTGC+AGG | + | chr1.1:58301386-58301405 | MS.gene86824:CDS | 55.0% | |
| GGTGGGGGAATGAATGTGGA+TGG | - | chr1.1:58303864-58303883 | None:intergenic | 55.0% | |
| GTGATTTCGCCGGTGAAGCT+TGG | + | chr1.1:58301323-58301342 | MS.gene86824:CDS | 55.0% | |
| GTGGATGGTCTTCTAGGCCA+GGG | - | chr1.1:58306682-58306701 | None:intergenic | 55.0% | |
| TGCGCCACCCTACATAACTC+CGG | - | chr1.1:58301257-58301276 | None:intergenic | 55.0% | |
| TGGTGGTATGGTCACCCAAG+TGG | - | chr1.1:58303790-58303809 | None:intergenic | 55.0% | |
| TGTGGATGGTCTTCTAGGCC+AGG | - | chr1.1:58306683-58306702 | None:intergenic | 55.0% | |
| TTGGAGGATTGCGGCGGAAA+TGG | - | chr1.1:58301018-58301037 | None:intergenic | 55.0% | |
| ! | GGAGGTGAGTTGGAGGATTG+CGG | - | chr1.1:58301027-58301046 | None:intergenic | 55.0% |
| ! | TGGAATGATGGAGGGACACG+TGG | - | chr1.1:58303183-58303202 | None:intergenic | 55.0% |
| !! | GCCACGCGTCGCGTTTTAAT+TGG | - | chr1.1:58303281-58303300 | None:intergenic | 55.0% |
| ACGGTTTCGCTTGGCGGTTG+CGG | - | chr1.1:58300673-58300692 | None:intergenic | 60.0% | |
| ACTCTCCGACGCATGTTCGC+CGG | + | chr1.1:58300861-58300880 | MS.gene86824:CDS | 60.0% | |
| ACTCTCCGGCGAACATGCGT+CGG | - | chr1.1:58300869-58300888 | None:intergenic | 60.0% | |
| AGCTACCACGTGTTCTCCGG+TGG | - | chr1.1:58301048-58301067 | None:intergenic | 60.0% | |
| CGAATTTGGCGAACACGGCG+GGG | + | chr1.1:58300788-58300807 | MS.gene86824:CDS | 60.0% | |
| CGCATGTTCGCCGGAGAGTT+AGG | + | chr1.1:58300870-58300889 | MS.gene86824:CDS | 60.0% | |
| CGGCTGAGGTTAAGGACGGT+AGG | - | chr1.1:58300936-58300955 | None:intergenic | 60.0% | |
| CGTCTAATGGCCGCTCTCGA+AGG | + | chr1.1:58300954-58300973 | MS.gene86824:CDS | 60.0% | |
| GAGGATTGCGGCGGAAATGG+CGG | - | chr1.1:58301015-58301034 | None:intergenic | 60.0% | |
| GCCAAATTCGTGTCGTGCGC+TGG | - | chr1.1:58300778-58300797 | None:intergenic | 60.0% | |
| GCCAGCGCACGACACGAATT+TGG | + | chr1.1:58300774-58300793 | MS.gene86824:CDS | 60.0% | |
| GCCGCTGGATGTGCAGTAAG+CGG | - | chr1.1:58300988-58301007 | None:intergenic | 60.0% | |
| GCCGCTTACTGCACATCCAG+CGG | + | chr1.1:58300984-58301003 | MS.gene86824:CDS | 60.0% | |
| GGGCCATGGCCACGATACAT+GGG | - | chr1.1:58305541-58305560 | None:intergenic | 60.0% | |
| GTGTAGCACACGCGGAGACA+CGG | - | chr1.1:58303244-58303263 | None:intergenic | 60.0% | |
| GTTCTCCGGTGGAGGTGAGT+TGG | - | chr1.1:58301037-58301056 | None:intergenic | 60.0% | |
| TACCACGTGTTCTCCGGTGG+AGG | - | chr1.1:58301045-58301064 | None:intergenic | 60.0% | |
| TGAGGTGGCTGGGTCGAAGA+CGG | - | chr1.1:58300751-58300770 | None:intergenic | 60.0% | |
| TGGGCCATGGCCACGATACA+TGG | - | chr1.1:58305542-58305561 | None:intergenic | 60.0% | |
| TGTAGGGTGGCGCATCGGAA+AGG | + | chr1.1:58301263-58301282 | MS.gene86824:CDS | 60.0% | |
| TTTGGCGCGTGTAGCACACG+CGG | - | chr1.1:58303252-58303271 | None:intergenic | 60.0% | |
| ! | GAAAGGTGTGACGGTGGTGG+TGG | + | chr1.1:58301280-58301299 | MS.gene86824:CDS | 60.0% |
| ! | GCATCGGAAAGGTGTGACGG+TGG | + | chr1.1:58301274-58301293 | MS.gene86824:CDS | 60.0% |
| ! | GGCGCATCGGAAAGGTGTGA+CGG | + | chr1.1:58301271-58301290 | MS.gene86824:CDS | 60.0% |
| ! | GGTGAGTTGGAGGATTGCGG+CGG | - | chr1.1:58301024-58301043 | None:intergenic | 60.0% |
| ! | TCGGAAAGGTGTGACGGTGG+TGG | + | chr1.1:58301277-58301296 | MS.gene86824:CDS | 60.0% |
| !! | GGGTGGTGGTGGTGGTCATA+AGG | - | chr1.1:58300644-58300663 | None:intergenic | 60.0% |
| CACCTCCACCGGAGAACACG+TGG | + | chr1.1:58301040-58301059 | MS.gene86824:CDS | 65.0% | |
| GAGCGGCCATTAGACGGCTG+AGG | - | chr1.1:58300950-58300969 | None:intergenic | 65.0% | |
| GTTTCGCTTGGCGGTTGCGG+TGG | - | chr1.1:58300670-58300689 | None:intergenic | 65.0% | |
| ! | CGCTGGCTAGTGAGGTGGCT+GGG | - | chr1.1:58300761-58300780 | None:intergenic | 65.0% |
| ! | CTCCGGTGGAGGTGAGTTGG+AGG | - | chr1.1:58301034-58301053 | None:intergenic | 65.0% |
| !! | GGAAATGGCGGACATGCCGC+TGG | - | chr1.1:58301003-58301022 | None:intergenic | 65.0% |
| !! | GTGTCGTGCGCTGGCTAGTG+AGG | - | chr1.1:58300769-58300788 | None:intergenic | 65.0% |
| !! | TCGTGCGCTGGCTAGTGAGG+TGG | - | chr1.1:58300766-58300785 | None:intergenic | 65.0% |
| TCGCTTGGCGGTTGCGGTGG+CGG | - | chr1.1:58300667-58300686 | None:intergenic | 70.0% | |
| !! | GCGCTGGCTAGTGAGGTGGC+TGG | - | chr1.1:58300762-58300781 | None:intergenic | 70.0% |
| CGCTTGGCGGTTGCGGTGGC+GGG | - | chr1.1:58300666-58300685 | None:intergenic | 75.0% | |
| GCTTGGCGGTTGCGGTGGCG+GGG | - | chr1.1:58300665-58300684 | None:intergenic | 75.0% | |
| ! | CTTGGCGGTTGCGGTGGCGG+GGG | - | chr1.1:58300664-58300683 | None:intergenic | 75.0% |
| !!! | GGTGGCGGGGGTGGTGGTGG+TGG | - | chr1.1:58300652-58300671 | None:intergenic | 80.0% |
| !!! | GGTTGCGGTGGCGGGGGTGG+TGG | - | chr1.1:58300658-58300677 | None:intergenic | 80.0% |
| !!! | TGCGGTGGCGGGGGTGGTGG+TGG | - | chr1.1:58300655-58300674 | None:intergenic | 80.0% |
| !!! | GGCGGTTGCGGTGGCGGGGG+TGG | - | chr1.1:58300661-58300680 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 58300627 | 58307048 | 58300627 | ID=MS.gene86824 |
| chr1.1 | mRNA | 58300627 | 58307048 | 58300627 | ID=MS.gene86824.t1;Parent=MS.gene86824 |
| chr1.1 | exon | 58300627 | 58301407 | 58300627 | ID=MS.gene86824.t1.exon1;Parent=MS.gene86824.t1 |
| chr1.1 | CDS | 58300627 | 58301407 | 58300627 | ID=cds.MS.gene86824.t1;Parent=MS.gene86824.t1 |
| chr1.1 | exon | 58306471 | 58307048 | 58306471 | ID=MS.gene86824.t1.exon2;Parent=MS.gene86824.t1 |
| chr1.1 | CDS | 58306471 | 58307048 | 58306471 | ID=cds.MS.gene86824.t1;Parent=MS.gene86824.t1 |
| Gene Sequence |
| Protein sequence |
