Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87308.t1 | XP_013452366.1 | 96.6 | 235 | 8 | 0 | 4 | 238 | 63 | 297 | 3.60E-130 | 474.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87308.t1 | Q8GXT7 | 48.3 | 240 | 103 | 4 | 4 | 238 | 68 | 291 | 7.1e-58 | 225.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87308.t1 | A0A072U9B5 | 96.6 | 235 | 8 | 0 | 4 | 238 | 63 | 297 | 2.6e-130 | 474.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene87308 | MS.gene56734 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87308.t1 | MTR_6g053720 | 96.596 | 235 | 8 | 0 | 4 | 238 | 63 | 297 | 1.69e-173 | 479 |
| MS.gene87308.t1 | MTR_4g118560 | 42.412 | 257 | 122 | 5 | 4 | 238 | 46 | 298 | 5.42e-62 | 196 |
| MS.gene87308.t1 | MTR_6g009440 | 41.732 | 254 | 127 | 7 | 4 | 238 | 60 | 311 | 1.05e-60 | 193 |
| MS.gene87308.t1 | MTR_2g020800 | 41.085 | 258 | 124 | 6 | 5 | 238 | 50 | 303 | 2.96e-58 | 187 |
| MS.gene87308.t1 | MTR_2g020800 | 41.016 | 256 | 125 | 6 | 5 | 238 | 50 | 301 | 1.08e-57 | 185 |
| MS.gene87308.t1 | MTR_3g114670 | 37.245 | 196 | 103 | 6 | 5 | 180 | 79 | 274 | 1.03e-30 | 115 |
| MS.gene87308.t1 | MTR_8g074880 | 33.838 | 198 | 111 | 5 | 4 | 181 | 124 | 321 | 4.34e-30 | 114 |
| MS.gene87308.t1 | MTR_8g074890 | 35.025 | 197 | 108 | 6 | 4 | 180 | 75 | 271 | 6.04e-30 | 112 |
| MS.gene87308.t1 | MTR_8g074810 | 36.735 | 196 | 104 | 7 | 4 | 179 | 76 | 271 | 1.44e-28 | 109 |
| MS.gene87308.t1 | MTR_5g022960 | 32.308 | 195 | 112 | 5 | 5 | 179 | 88 | 282 | 4.02e-28 | 108 |
| MS.gene87308.t1 | MTR_3g114590 | 34.031 | 191 | 112 | 4 | 6 | 182 | 75 | 265 | 6.98e-27 | 108 |
| MS.gene87308.t1 | MTR_3g114590 | 29.189 | 185 | 98 | 5 | 12 | 180 | 293 | 460 | 7.78e-14 | 70.9 |
| MS.gene87308.t1 | MTR_8g074830 | 32.653 | 196 | 112 | 6 | 4 | 179 | 79 | 274 | 1.25e-26 | 104 |
| MS.gene87308.t1 | MTR_1g116810 | 33.505 | 194 | 109 | 5 | 4 | 179 | 84 | 275 | 3.24e-25 | 100 |
| MS.gene87308.t1 | MTR_3g114610 | 31.579 | 190 | 115 | 4 | 6 | 180 | 107 | 296 | 1.14e-22 | 94.4 |
| MS.gene87308.t1 | MTR_8g074870 | 30.412 | 194 | 103 | 6 | 4 | 178 | 37 | 217 | 3.12e-21 | 89.0 |
| MS.gene87308.t1 | MTR_5g016090 | 24.227 | 194 | 124 | 5 | 7 | 179 | 95 | 286 | 1.09e-13 | 69.3 |
| MS.gene87308.t1 | MTR_4g095370 | 25.735 | 136 | 94 | 3 | 48 | 178 | 154 | 287 | 1.59e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87308.t1 | AT4G25600 | 48.148 | 243 | 105 | 4 | 1 | 238 | 1 | 227 | 1.05e-74 | 226 |
| MS.gene87308.t1 | AT4G25600 | 48.148 | 243 | 105 | 4 | 1 | 238 | 13 | 239 | 1.12e-74 | 226 |
| MS.gene87308.t1 | AT4G25600 | 48.333 | 240 | 103 | 4 | 4 | 238 | 7 | 230 | 2.20e-74 | 225 |
| MS.gene87308.t1 | AT4G25600 | 48.333 | 240 | 103 | 4 | 4 | 238 | 68 | 291 | 2.06e-73 | 225 |
| MS.gene87308.t1 | AT3G28490 | 43.529 | 255 | 117 | 6 | 4 | 238 | 41 | 288 | 1.06e-65 | 205 |
| MS.gene87308.t1 | AT3G28480 | 41.339 | 254 | 126 | 6 | 4 | 238 | 65 | 314 | 6.95e-63 | 199 |
| MS.gene87308.t1 | AT3G28480 | 40.076 | 262 | 126 | 6 | 4 | 238 | 65 | 322 | 1.45e-61 | 196 |
| MS.gene87308.t1 | AT3G06300 | 41.245 | 257 | 125 | 6 | 4 | 238 | 47 | 299 | 2.71e-60 | 192 |
| MS.gene87308.t1 | AT5G18900 | 38.281 | 256 | 132 | 6 | 5 | 238 | 47 | 298 | 6.65e-56 | 181 |
| MS.gene87308.t1 | AT4G35810 | 34.171 | 199 | 111 | 4 | 4 | 182 | 89 | 287 | 8.88e-31 | 115 |
| MS.gene87308.t1 | AT4G35810 | 34.171 | 199 | 111 | 4 | 4 | 182 | 89 | 287 | 8.88e-31 | 115 |
| MS.gene87308.t1 | AT1G20270 | 32.995 | 197 | 112 | 5 | 5 | 181 | 86 | 282 | 5.47e-29 | 110 |
| MS.gene87308.t1 | AT2G17720 | 33.673 | 196 | 110 | 5 | 6 | 181 | 91 | 286 | 7.94e-29 | 110 |
| MS.gene87308.t1 | AT5G66060 | 32.474 | 194 | 111 | 4 | 6 | 179 | 89 | 282 | 1.32e-26 | 104 |
| MS.gene87308.t1 | AT2G43080 | 28.283 | 198 | 126 | 3 | 4 | 185 | 86 | 283 | 1.17e-21 | 91.3 |
| MS.gene87308.t1 | AT4G35820 | 32.787 | 183 | 83 | 7 | 5 | 164 | 98 | 263 | 7.05e-16 | 75.1 |
| MS.gene87308.t1 | AT2G23096 | 28.426 | 197 | 111 | 7 | 4 | 177 | 77 | 266 | 1.74e-15 | 74.3 |
| MS.gene87308.t1 | AT5G66060 | 32.283 | 127 | 70 | 3 | 6 | 118 | 89 | 213 | 5.39e-13 | 66.6 |
| MS.gene87308.t1 | AT4G33910 | 28.889 | 135 | 87 | 5 | 51 | 179 | 150 | 281 | 1.14e-12 | 66.2 |
Find 59 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGACCACATATCGCCTTTA+AGG | 0.151018 | 6.1:+33018407 | None:intergenic |
| CCTTTACAGGTCATGCATTA+TGG | 0.184280 | 6.1:-33019087 | MS.gene87308:CDS |
| TTTCACAAACAAAACCAAAT+TGG | 0.191233 | 6.1:-33019034 | MS.gene87308:CDS |
| GCTCGATGCCCTGTCCTTAA+AGG | 0.210672 | 6.1:-33018421 | MS.gene87308:CDS |
| TCTTGTCAGGAGATGTATTT+AGG | 0.219035 | 6.1:+33018455 | None:intergenic |
| GTGTGACTACCTTATTTATT+TGG | 0.242556 | 6.1:-33021251 | MS.gene87308:intron |
| AGAGAACAGCAAGCCTTTAC+AGG | 0.299865 | 6.1:-33019100 | MS.gene87308:CDS |
| CTTTACAGGTCATGCATTAT+GGG | 0.305434 | 6.1:-33019086 | MS.gene87308:CDS |
| GCCGTACTCACCACTGATTC+AGG | 0.315848 | 6.1:+33018937 | None:intergenic |
| AGAGGAAACTTCATTGGATA+TGG | 0.342638 | 6.1:-33020675 | MS.gene87308:CDS |
| AGAACTGCGTTCCCTTTAAC+TGG | 0.346169 | 6.1:+33018493 | None:intergenic |
| TTGAAGAAAGACTTTCAGTT+TGG | 0.355736 | 6.1:-33019230 | MS.gene87308:CDS |
| TTCACAAACAAAACCAAATT+GGG | 0.356049 | 6.1:-33019033 | MS.gene87308:CDS |
| AGGTCCGGTTGATCCCAATT+TGG | 0.361801 | 6.1:+33019020 | None:intergenic |
| AAAGAAAGAGGAAACTTCAT+TGG | 0.368859 | 6.1:-33020681 | MS.gene87308:CDS |
| GGGATCAACCGGACCTTTGA+TGG | 0.371144 | 6.1:-33019013 | MS.gene87308:CDS |
| TGCAACATACCAAATAAATA+AGG | 0.373711 | 6.1:+33021242 | None:intergenic |
| GAGGTTCTCCAACCAGTTAA+AGG | 0.393818 | 6.1:-33018505 | MS.gene87308:CDS |
| TCAGTACAATCTTCATCTTC+CGG | 0.396113 | 6.1:+33018331 | None:intergenic |
| AAAACCAAATTGGGATCAAC+CGG | 0.420089 | 6.1:-33019024 | MS.gene87308:CDS |
| GTTGGATCTCCTGATTACTA+TGG | 0.429222 | 6.1:-33018244 | MS.gene87308:CDS |
| CGACATGTACCATAGTAATC+AGG | 0.442588 | 6.1:+33018235 | None:intergenic |
| TTCTATACAAGATCGATTAG+TGG | 0.456312 | 6.1:-33018373 | MS.gene87308:CDS |
| CTGCGTTCCCTTTAACTGGT+TGG | 0.475004 | 6.1:+33018497 | None:intergenic |
| CACTGTTGCCATCAAAGGTC+CGG | 0.475147 | 6.1:+33019005 | None:intergenic |
| GCGTGTAAGCTACTCTTGTC+AGG | 0.476850 | 6.1:+33018442 | None:intergenic |
| AGGTTCTCCAACCAGTTAAA+GGG | 0.478509 | 6.1:-33018504 | MS.gene87308:CDS |
| GGATGATAGTTGTCCCGCTT+GGG | 0.483207 | 6.1:-33018305 | MS.gene87308:CDS |
| TGTCCCGCTTGGGCAGCAAC+GGG | 0.484124 | 6.1:-33018295 | MS.gene87308:CDS |
| CCATAATGCATGACCTGTAA+AGG | 0.487176 | 6.1:+33019087 | None:intergenic |
| CGGAACCCTGTCTACATGGT+TGG | 0.491604 | 6.1:-33018262 | MS.gene87308:CDS |
| ATTTGACCAGCTGCTACTCT+TGG | 0.492285 | 6.1:+33018543 | None:intergenic |
| GGAGATCCAACCATGTAGAC+AGG | 0.498626 | 6.1:+33018256 | None:intergenic |
| AGGATGATAGTTGTCCCGCT+TGG | 0.502433 | 6.1:-33018306 | MS.gene87308:CDS |
| TTGTCCCGCTTGGGCAGCAA+CGG | 0.504576 | 6.1:-33018296 | MS.gene87308:CDS |
| CACATATCGCCTTTAAGGAC+AGG | 0.515314 | 6.1:+33018412 | None:intergenic |
| TCAACGGAACCCTGTCTACA+TGG | 0.530423 | 6.1:-33018266 | MS.gene87308:CDS |
| TCTCCCGTTGCTGCCCAAGC+GGG | 0.531159 | 6.1:+33018292 | None:intergenic |
| TTCTCCCGTTGCTGCCCAAG+CGG | 0.536086 | 6.1:+33018291 | None:intergenic |
| TGGTGGCTATTCAAAGAAAG+AGG | 0.553698 | 6.1:-33020693 | MS.gene87308:CDS |
| AGAATCACTGTTGCCATCAA+AGG | 0.553753 | 6.1:+33019000 | None:intergenic |
| ATCTCTCGAATGCTACTCAA+GGG | 0.570249 | 6.1:-33018975 | MS.gene87308:CDS |
| CATCTCTCGAATGCTACTCA+AGG | 0.573935 | 6.1:-33018976 | MS.gene87308:CDS |
| TCACCACTGATTCAGGAAAG+AGG | 0.576012 | 6.1:+33018944 | None:intergenic |
| CACAGACCAAGAGTAGCAGC+TGG | 0.591686 | 6.1:-33018549 | MS.gene87308:intron |
| AATCCTCTTTCCTGAATCAG+TGG | 0.600382 | 6.1:-33018947 | MS.gene87308:intron |
| CTGTCCTTAAAGGCGATATG+TGG | 0.609635 | 6.1:-33018411 | MS.gene87308:CDS |
| TATACAAGATCGATTAGTGG+AGG | 0.618199 | 6.1:-33018370 | MS.gene87308:CDS |
| TTTAGGATGATATTGTCAAG+AGG | 0.632824 | 6.1:-33019254 | MS.gene87308:intron |
| ATACAAGATCGATTAGTGGA+GGG | 0.647479 | 6.1:-33018369 | MS.gene87308:CDS |
| CAGCAACGGGAGAATGTCAA+CGG | 0.647505 | 6.1:-33018282 | MS.gene87308:CDS |
| CTGATTACTATGGTACATGT+CGG | 0.648513 | 6.1:-33018234 | MS.gene87308:CDS |
| AGATGAAGATTGTACTGATG+AGG | 0.649759 | 6.1:-33018326 | MS.gene87308:CDS |
| TCTCTCGAATGCTACTCAAG+GGG | 0.663851 | 6.1:-33018974 | MS.gene87308:CDS |
| GAGATCCAACCATGTAGACA+GGG | 0.668526 | 6.1:+33018257 | None:intergenic |
| AGGGAAAGTCTCAACTACGC+CGG | 0.673242 | 6.1:-33018350 | MS.gene87308:CDS |
| ACATATCGCCTTTAAGGACA+GGG | 0.680203 | 6.1:+33018413 | None:intergenic |
| CTCTCGAATGCTACTCAAGG+GGG | 0.692797 | 6.1:-33018973 | MS.gene87308:CDS |
| AAATTGTAGAAATAACAGTG+AGG | 0.789611 | 6.1:-33018524 | MS.gene87308:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GGAAAAAAAAAAAAAAATTA+AGG | + | chr6.1:33022280-33022299 | None:intergenic | 10.0% |
| !! | TTAATTATATTATAAGTAGA+GGG | - | chr6.1:33020161-33020180 | MS.gene87308:intron | 10.0% |
| !! | TTTAATTATATTATAAGTAG+AGG | - | chr6.1:33020160-33020179 | MS.gene87308:intron | 10.0% |
| !!! | TTTTAAATTTGAGAAAATAT+TGG | - | chr6.1:33018320-33018339 | MS.gene87308:CDS | 10.0% |
| !!! | TTTTATATTACAGAAAATTA+TGG | + | chr6.1:33021645-33021664 | None:intergenic | 10.0% |
| !! | ATCAATGTAAAACTAATTTA+TGG | - | chr6.1:33020096-33020115 | MS.gene87308:intron | 15.0% |
| !! | GTAATATAAAATATCATAAC+CGG | - | chr6.1:33021654-33021673 | MS.gene87308:intron | 15.0% |
| !! | TAAAAATAACAGTGTAATTT+AGG | - | chr6.1:33022480-33022499 | MS.gene87308:intron | 15.0% |
| !! | TAATTATATTATAAGTAGAG+GGG | - | chr6.1:33020162-33020181 | MS.gene87308:intron | 15.0% |
| !! | TATGTTCATTAAAGATATAT+CGG | + | chr6.1:33019947-33019966 | None:intergenic | 15.0% |
| !! | TTATTGTCAAAAAGTAATAT+AGG | - | chr6.1:33021329-33021348 | MS.gene87308:intron | 15.0% |
| !!! | AAATTTGGAATTAACTAATT+AGG | + | chr6.1:33021428-33021447 | None:intergenic | 15.0% |
| !!! | ATTTTTCTATTAGTTTGTTA+TGG | - | chr6.1:33018250-33018269 | MS.gene87308:CDS | 15.0% |
| !!! | TAAATTACACTGTTATTTTT+AGG | + | chr6.1:33022481-33022500 | None:intergenic | 15.0% |
| !!! | TCTTTTACATTTTCAAAATT+TGG | + | chr6.1:33021443-33021462 | None:intergenic | 15.0% |
| !!! | TTTTTCTATTAGTTTGTTAT+GGG | - | chr6.1:33018251-33018270 | MS.gene87308:CDS | 15.0% |
| !! | AAAAAATGTTCATTTCCATT+TGG | - | chr6.1:33018286-33018305 | MS.gene87308:CDS | 20.0% |
| !! | AAAGTAACATTTATAACTGA+AGG | + | chr6.1:33022317-33022336 | None:intergenic | 20.0% |
| !! | AAATATACAGTTACAAATGT+GGG | - | chr6.1:33020040-33020059 | MS.gene87308:intron | 20.0% |
| !! | AAGTAACATTTATAACTGAA+GGG | + | chr6.1:33022316-33022335 | None:intergenic | 20.0% |
| !! | AGTTGTTTATTAGTAGAATT+CGG | - | chr6.1:33019062-33019081 | MS.gene87308:CDS | 20.0% |
| !! | ATAAGTATAGAAAAAAGTTC+AGG | + | chr6.1:33020460-33020479 | None:intergenic | 20.0% |
| !! | ATTTACCATTTACTTAATGT+AGG | - | chr6.1:33020682-33020701 | MS.gene87308:CDS | 20.0% |
| !! | CAACTAAAATTTAGTTAGTT+AGG | - | chr6.1:33018366-33018385 | MS.gene87308:CDS | 20.0% |
| !! | CATAATCAAAAAGAAAACAA+AGG | + | chr6.1:33022521-33022540 | None:intergenic | 20.0% |
| !! | TAAATATACAGTTACAAATG+TGG | - | chr6.1:33020039-33020058 | MS.gene87308:intron | 20.0% |
| !! | TCATTAGTGTTATAAGTTAT+AGG | - | chr6.1:33021779-33021798 | MS.gene87308:intron | 20.0% |
| !! | TTATAGGATAGAAATATTGA+AGG | + | chr6.1:33021250-33021269 | None:intergenic | 20.0% |
| !! | TTGAAAATTTGCATATGTAA+TGG | + | chr6.1:33018965-33018984 | None:intergenic | 20.0% |
| !! | TTGAAAGTCTTAAATAGAAA+TGG | + | chr6.1:33020204-33020223 | None:intergenic | 20.0% |
| !!! | AAAACTGTTTTCATTATTTC+TGG | + | chr6.1:33020900-33020919 | None:intergenic | 20.0% |
| !!! | AATGATATGGTATAGATTTT+TGG | - | chr6.1:33018430-33018449 | MS.gene87308:CDS | 20.0% |
| !!! | AGTTTTTTTGACATTTTCAT+TGG | - | chr6.1:33020914-33020933 | MS.gene87308:intron | 20.0% |
| !!! | CTAACTAACTAAATTTTAGT+TGG | + | chr6.1:33018368-33018387 | None:intergenic | 20.0% |
| !!! | GTATATTTAAAATGACGATA+TGG | + | chr6.1:33020028-33020047 | None:intergenic | 20.0% |
| ! | AAACAATGTGGTTATAAGTT+GGG | + | chr6.1:33019380-33019399 | None:intergenic | 25.0% |
| ! | AAATTGTAGAAATAACAGTG+AGG | - | chr6.1:33022578-33022597 | MS.gene87308:intron | 25.0% |
| ! | AACAAGAACATGTAACATAA+TGG | + | chr6.1:33021220-33021239 | None:intergenic | 25.0% |
| ! | AATATACAGTTACAAATGTG+GGG | - | chr6.1:33020041-33020060 | MS.gene87308:intron | 25.0% |
| ! | ACTTCAAGAAAACTTAATGT+AGG | - | chr6.1:33020634-33020653 | MS.gene87308:intron | 25.0% |
| ! | AGCAGAAAGATATTGAAAAA+CGG | - | chr6.1:33021536-33021555 | MS.gene87308:intron | 25.0% |
| ! | AGTAGAATTCGGTTATAATT+TGG | - | chr6.1:33019073-33019092 | MS.gene87308:CDS | 25.0% |
| ! | ATTAGGGTTTAGTACTATAT+TGG | - | chr6.1:33018502-33018521 | MS.gene87308:CDS | 25.0% |
| ! | CAAAATGAAACGTAAAAACT+TGG | - | chr6.1:33022443-33022462 | MS.gene87308:intron | 25.0% |
| ! | CTAAAATTTAGTTAGTTAGG+TGG | - | chr6.1:33018369-33018388 | MS.gene87308:CDS | 25.0% |
| ! | CTTCAAGAATAACTTAATGT+AGG | - | chr6.1:33020720-33020739 | MS.gene87308:intron | 25.0% |
| ! | GAAACCTAAAAATGACTTAA+GGG | + | chr6.1:33022248-33022267 | None:intergenic | 25.0% |
| ! | GAGTACAATATCAGATATTA+GGG | - | chr6.1:33018486-33018505 | MS.gene87308:CDS | 25.0% |
| ! | GCGAATGTGTTTATAAATTA+GGG | + | chr6.1:33019147-33019166 | None:intergenic | 25.0% |
| ! | GTAGAATTCGGTTATAATTT+GGG | - | chr6.1:33019074-33019093 | MS.gene87308:CDS | 25.0% |
| ! | GTGTAATGGTTGTAATTTAA+GGG | - | chr6.1:33022418-33022437 | MS.gene87308:intron | 25.0% |
| ! | TAACACTAATGAATTGTTCA+TGG | + | chr6.1:33021771-33021790 | None:intergenic | 25.0% |
| ! | TAATGGTTTATGCAATGATA+TGG | - | chr6.1:33018417-33018436 | MS.gene87308:CDS | 25.0% |
| ! | TATAAATTACCAATGATTCG+AGG | - | chr6.1:33019014-33019033 | MS.gene87308:CDS | 25.0% |
| ! | TATACTTATTTCGATGAACT+AGG | - | chr6.1:33020471-33020490 | MS.gene87308:intron | 25.0% |
| ! | TCAGATATAAACCATTCTTA+GGG | - | chr6.1:33020749-33020768 | MS.gene87308:intron | 25.0% |
| ! | TCTGACATTTGATGAAAATA+TGG | + | chr6.1:33019173-33019192 | None:intergenic | 25.0% |
| ! | TGAAACCTAAAAATGACTTA+AGG | + | chr6.1:33022249-33022268 | None:intergenic | 25.0% |
| ! | TGAGTACAATATCAGATATT+AGG | - | chr6.1:33018485-33018504 | MS.gene87308:CDS | 25.0% |
| ! | TGCAACATACCAAATAAATA+AGG | + | chr6.1:33019863-33019882 | None:intergenic | 25.0% |
| ! | TGCGAATGTGTTTATAAATT+AGG | + | chr6.1:33019148-33019167 | None:intergenic | 25.0% |
| ! | TGTGTAATGGTTGTAATTTA+AGG | - | chr6.1:33022417-33022436 | MS.gene87308:intron | 25.0% |
| ! | TTAAGGCTAAATTAAACCTT+TGG | - | chr6.1:33022221-33022240 | MS.gene87308:intron | 25.0% |
| ! | TTCACAAACAAAACCAAATT+GGG | - | chr6.1:33022069-33022088 | MS.gene87308:intron | 25.0% |
| ! | TTCATTAAAGATATATCGGA+TGG | + | chr6.1:33019943-33019962 | None:intergenic | 25.0% |
| ! | TTGATCAAATAGATACCTTT+AGG | + | chr6.1:33021907-33021926 | None:intergenic | 25.0% |
| ! | TTGTAGACATTATTATGATG+AGG | - | chr6.1:33021809-33021828 | MS.gene87308:intron | 25.0% |
| ! | TTTCACAAACAAAACCAAAT+TGG | - | chr6.1:33022068-33022087 | MS.gene87308:intron | 25.0% |
| ! | TTTGGAAGAACTTATGAATA+AGG | + | chr6.1:33019566-33019585 | None:intergenic | 25.0% |
| ! | TTTGGATTGTCTTGATATAA+TGG | - | chr6.1:33018400-33018419 | MS.gene87308:CDS | 25.0% |
| !! | ATTAGTTTAATGGACATTCA+AGG | - | chr6.1:33019981-33020000 | MS.gene87308:intron | 25.0% |
| !! | CAAGTTTTTACGTTTCATTT+TGG | + | chr6.1:33022445-33022464 | None:intergenic | 25.0% |
| !! | GATTCTGGATAAACATTTTT+GGG | - | chr6.1:33019274-33019293 | MS.gene87308:intron | 25.0% |
| !! | GTCAGTGTAAATTAGTTTAA+TGG | - | chr6.1:33019971-33019990 | MS.gene87308:intron | 25.0% |
| !! | GTTTGCATTGTGAAAATTTT+CGG | - | chr6.1:33020540-33020559 | MS.gene87308:intron | 25.0% |
| !! | TAATTTAGGATATCTTGTTC+TGG | - | chr6.1:33022494-33022513 | MS.gene87308:intron | 25.0% |
| !! | TATGTTTTCACAAAGTAAAC+AGG | - | chr6.1:33021036-33021055 | MS.gene87308:intron | 25.0% |
| !! | TGATTCTGGATAAACATTTT+TGG | - | chr6.1:33019273-33019292 | MS.gene87308:intron | 25.0% |
| !! | TTAGTTTAATGGACATTCAA+GGG | - | chr6.1:33019982-33020001 | MS.gene87308:intron | 25.0% |
| !!! | GTTATTTTTAGGTTTCACTT+TGG | + | chr6.1:33022470-33022489 | None:intergenic | 25.0% |
| !!! | TGAGTTTTTTTTGCAATTCT+TGG | - | chr6.1:33020248-33020267 | MS.gene87308:intron | 25.0% |
| !!! | TTTGACATTTTCATTGGTTA+TGG | - | chr6.1:33020920-33020939 | MS.gene87308:intron | 25.0% |
| !!! | TTTTAGCTTATTCTTTGTGT+TGG | - | chr6.1:33020609-33020628 | MS.gene87308:intron | 25.0% |
| AAAACTAAATCTACGCCAAA+TGG | + | chr6.1:33018304-33018323 | None:intergenic | 30.0% | |
| AAAATGACCAAAGTGTGTAA+TGG | - | chr6.1:33022404-33022423 | MS.gene87308:intron | 30.0% | |
| AAAGAAAGAGGAAACTTCAT+TGG | - | chr6.1:33020421-33020440 | MS.gene87308:intron | 30.0% | |
| AAATTTAGTTAGTTAGGTGG+TGG | - | chr6.1:33018372-33018391 | MS.gene87308:CDS | 30.0% | |
| AACAAGTAATTGCAACATGT+TGG | + | chr6.1:33021728-33021747 | None:intergenic | 30.0% | |
| AATGTTTATCCAGAATCAGT+TGG | + | chr6.1:33019271-33019290 | None:intergenic | 30.0% | |
| ACAACGTTTCACAAAGTAAA+CGG | + | chr6.1:33020776-33020795 | None:intergenic | 30.0% | |
| ACATTTACTTGCAAAACACT+TGG | + | chr6.1:33021298-33021317 | None:intergenic | 30.0% | |
| AGAATCAACTAGCTGTAAAA+AGG | + | chr6.1:33019741-33019760 | None:intergenic | 30.0% | |
| AGATCTAGGTATTAGAAACT+TGG | - | chr6.1:33019300-33019319 | MS.gene87308:intron | 30.0% | |
| ATATGGCATGGAAAAATGAA+GGG | + | chr6.1:33020011-33020030 | None:intergenic | 30.0% | |
| ATGTTTATCCAGAATCAGTT+GGG | + | chr6.1:33019270-33019289 | None:intergenic | 30.0% | |
| ATTACAACCATTACACACTT+TGG | + | chr6.1:33022414-33022433 | None:intergenic | 30.0% | |
| ATTATGGGCTTGAAAAAGAT+AGG | - | chr6.1:33022031-33022050 | MS.gene87308:intron | 30.0% | |
| CAAACAATGTGGTTATAAGT+TGG | + | chr6.1:33019381-33019400 | None:intergenic | 30.0% | |
| CAACTTATAACCACATTGTT+TGG | - | chr6.1:33019379-33019398 | MS.gene87308:intron | 30.0% | |
| CAAGAAAAATCATCTGGAAA+TGG | - | chr6.1:33020389-33020408 | MS.gene87308:intron | 30.0% | |
| CAGAAAATTATGGCCAAATA+TGG | + | chr6.1:33021635-33021654 | None:intergenic | 30.0% | |
| CTATGCAACAACTACTATTA+AGG | + | chr6.1:33019659-33019678 | None:intergenic | 30.0% | |
| GAATCAACTAGCTGTAAAAA+GGG | + | chr6.1:33019740-33019759 | None:intergenic | 30.0% | |
| GATCTAGGTATTAGAAACTT+GGG | - | chr6.1:33019301-33019320 | MS.gene87308:intron | 30.0% | |
| GCAACTACTCATATATTTGT+AGG | - | chr6.1:33021476-33021495 | MS.gene87308:intron | 30.0% | |
| GGCAAAATGATGAATCTATA+AGG | - | chr6.1:33018792-33018811 | MS.gene87308:intron | 30.0% | |
| GGTTGATTGTTCATATAAGT+AGG | - | chr6.1:33018813-33018832 | MS.gene87308:intron | 30.0% | |
| GTCAGATATAAACCATTCTT+AGG | - | chr6.1:33020748-33020767 | MS.gene87308:intron | 30.0% | |
| GTCCAACATTGGATAAAATA+TGG | + | chr6.1:33019405-33019424 | None:intergenic | 30.0% | |
| TAAAATATGGCCAAACAATG+TGG | + | chr6.1:33019392-33019411 | None:intergenic | 30.0% | |
| TAATGAATTGTTCATGGTCA+AGG | + | chr6.1:33021765-33021784 | None:intergenic | 30.0% | |
| TAATTAGTGTCCAAAGTTCA+GGG | + | chr6.1:33021405-33021424 | None:intergenic | 30.0% | |
| TATGGTTGATTGAGTGTTAT+AGG | + | chr6.1:33021266-33021285 | None:intergenic | 30.0% | |
| TCATAAGTTCTTCCAAATTG+TGG | - | chr6.1:33019569-33019588 | MS.gene87308:intron | 30.0% | |
| TGATGAAGTGAATGATGTAA+AGG | + | chr6.1:33020134-33020153 | None:intergenic | 30.0% | |
| TTCTATACAAGATCGATTAG+TGG | - | chr6.1:33022729-33022748 | MS.gene87308:intron | 30.0% | |
| TTGAAGAAAGACTTTCAGTT+TGG | - | chr6.1:33021872-33021891 | MS.gene87308:intron | 30.0% | |
| TTGACTCTGACTTACAAAAT+TGG | - | chr6.1:33019103-33019122 | MS.gene87308:intron | 30.0% | |
| ! | AAAAGACAAGATTTTCCCAT+CGG | + | chr6.1:33020593-33020612 | None:intergenic | 30.0% |
| ! | AAATTGCCAGGCTTTAATAT+GGG | - | chr6.1:33021367-33021386 | MS.gene87308:intron | 30.0% |
| ! | GTGTGACTACCTTATTTATT+TGG | - | chr6.1:33019851-33019870 | MS.gene87308:intron | 30.0% |
| ! | TTAAGTTGTTTATCCAAGCA+TGG | + | chr6.1:33019040-33019059 | None:intergenic | 30.0% |
| ! | TTTAAAATGACGATATGGCA+TGG | + | chr6.1:33020023-33020042 | None:intergenic | 30.0% |
| ! | TTTAGGATGATATTGTCAAG+AGG | - | chr6.1:33021848-33021867 | MS.gene87308:intron | 30.0% |
| ! | TTTGAAGTGAATCATTGTGA+TGG | - | chr6.1:33020841-33020860 | MS.gene87308:intron | 30.0% |
| ! | TTTGTACAAAGGCTTTTTGT+CGG | - | chr6.1:33019821-33019840 | MS.gene87308:intron | 30.0% |
| !! | TTTTACTTGTTAACAAGCAC+AGG | + | chr6.1:33020984-33021003 | None:intergenic | 30.0% |
| !!! | GCTTTTAGAATTTGTATCAC+AGG | + | chr6.1:33021946-33021965 | None:intergenic | 30.0% |
| !!! | TTACTCTATTGTTTTTGCCA+AGG | - | chr6.1:33020364-33020383 | MS.gene87308:intron | 30.0% |
| AAAACCAAATTGGGATCAAC+CGG | - | chr6.1:33022078-33022097 | MS.gene87308:intron | 35.0% | |
| AAAATGACTTAAGGGACCAA+AGG | + | chr6.1:33022240-33022259 | None:intergenic | 35.0% | |
| AACACTTGGCTTACAAGTTA+TGG | + | chr6.1:33021284-33021303 | None:intergenic | 35.0% | |
| AAGAACAAGCTAAACCTATG+AGG | + | chr6.1:33021075-33021094 | None:intergenic | 35.0% | |
| AAGGCACAAGAAAAATCATC+TGG | - | chr6.1:33020383-33020402 | MS.gene87308:intron | 35.0% | |
| AAGTGTTAAGAGTCCAACAT+TGG | + | chr6.1:33019416-33019435 | None:intergenic | 35.0% | |
| ACATCATTCACTTCATCACT+TGG | - | chr6.1:33020136-33020155 | MS.gene87308:intron | 35.0% | |
| ACTTGTAAAAGCAAATTGCC+AGG | - | chr6.1:33021355-33021374 | MS.gene87308:intron | 35.0% | |
| AGAGGAAACTTCATTGGATA+TGG | - | chr6.1:33020427-33020446 | MS.gene87308:intron | 35.0% | |
| AGGTATTAGAAACTTGGGTT+GGG | - | chr6.1:33019306-33019325 | MS.gene87308:intron | 35.0% | |
| AGTGGCCTACATTAAGTAAA+TGG | + | chr6.1:33020690-33020709 | None:intergenic | 35.0% | |
| AGTTCGTCAAATGTTTCCTA+TGG | + | chr6.1:33022366-33022385 | None:intergenic | 35.0% | |
| ATACAAGATCGATTAGTGGA+GGG | - | chr6.1:33022733-33022752 | MS.gene87308:intron | 35.0% | |
| ATCAATAACTATTGACCGCT+TGG | + | chr6.1:33021189-33021208 | None:intergenic | 35.0% | |
| CACAGCAAGTACATGTAAAA+TGG | + | chr6.1:33018467-33018486 | None:intergenic | 35.0% | |
| CTGAAGGGACTAAAATGAAA+CGG | + | chr6.1:33022301-33022320 | None:intergenic | 35.0% | |
| CTGATTACTATGGTACATGT+CGG | - | chr6.1:33022868-33022887 | MS.gene87308:intron | 35.0% | |
| CTTTACAGGTCATGCATTAT+GGG | - | chr6.1:33022016-33022035 | MS.gene87308:intron | 35.0% | |
| GAAAAATCATCTGGAAATGG+TGG | - | chr6.1:33020392-33020411 | MS.gene87308:intron | 35.0% | |
| GAACTAGGCACTAGTAAATT+AGG | - | chr6.1:33020486-33020505 | MS.gene87308:intron | 35.0% | |
| GAATGGTTTATATCTGACAG+TGG | + | chr6.1:33020746-33020765 | None:intergenic | 35.0% | |
| GACCGTTAATATATTCCCAA+GGG | + | chr6.1:33018741-33018760 | None:intergenic | 35.0% | |
| GATATGGCATGGAAAAATGA+AGG | + | chr6.1:33020012-33020031 | None:intergenic | 35.0% | |
| GTAATTAGTGTCCAAAGTTC+AGG | + | chr6.1:33021406-33021425 | None:intergenic | 35.0% | |
| TAGGTATTAGAAACTTGGGT+TGG | - | chr6.1:33019305-33019324 | MS.gene87308:intron | 35.0% | |
| TATAAGGCTGAGTAAGAGTT+AGG | + | chr6.1:33019332-33019351 | None:intergenic | 35.0% | |
| TATACAAGATCGATTAGTGG+AGG | - | chr6.1:33022732-33022751 | MS.gene87308:intron | 35.0% | |
| TCAGTACAATCTTCATCTTC+CGG | + | chr6.1:33022774-33022793 | None:intergenic | 35.0% | |
| TCTTGAAGTTATTCTGACAG+TGG | + | chr6.1:33020708-33020727 | None:intergenic | 35.0% | |
| TCTTGTCAGGAGATGTATTT+AGG | + | chr6.1:33022650-33022669 | None:intergenic | 35.0% | |
| TGGTATTTATAGCCCTTTGT+GGG | - | chr6.1:33018551-33018570 | MS.gene87308:intron | 35.0% | |
| ! | AGATGAAGATTGTACTGATG+AGG | - | chr6.1:33022776-33022795 | MS.gene87308:intron | 35.0% |
| ! | AGATGATTTTTCTTGTGCCT+TGG | + | chr6.1:33020384-33020403 | None:intergenic | 35.0% |
| ! | CAAATTGCCAGGCTTTAATA+TGG | - | chr6.1:33021366-33021385 | MS.gene87308:intron | 35.0% |
| ! | CATTTTTCATTCGAGTCCAT+AGG | - | chr6.1:33022347-33022366 | MS.gene87308:intron | 35.0% |
| ! | CTATAGTGATAATGATGTCC+AGG | + | chr6.1:33021705-33021724 | None:intergenic | 35.0% |
| ! | GGCCATATTTTATCCAATGT+TGG | - | chr6.1:33019400-33019419 | MS.gene87308:intron | 35.0% |
| ! | GTTCTACACTGTTCTGTTTT+AGG | - | chr6.1:33021831-33021850 | MS.gene87308:intron | 35.0% |
| ! | GTTTGGACTTTTCTTCCTAA+AGG | - | chr6.1:33021889-33021908 | MS.gene87308:intron | 35.0% |
| ! | TGTAGGGTCTTTTTGTACAA+AGG | - | chr6.1:33019810-33019829 | MS.gene87308:intron | 35.0% |
| ! | TGTTCATTGTTTTCACCGAT+GGG | - | chr6.1:33020575-33020594 | MS.gene87308:intron | 35.0% |
| ! | TTGTTCATTGTTTTCACCGA+TGG | - | chr6.1:33020574-33020593 | MS.gene87308:intron | 35.0% |
| !! | ACATGTACTGATTGTGTCTT+AGG | - | chr6.1:33021125-33021144 | MS.gene87308:intron | 35.0% |
| !! | ACCTCAAAGTCGGTTTTATA+AGG | + | chr6.1:33019348-33019367 | None:intergenic | 35.0% |
| !! | AGGTTGACTTGGTTCTTAAT+TGG | - | chr6.1:33021145-33021164 | MS.gene87308:intron | 35.0% |
| !! | TTCTTGTTCCTTTTGCTGTA+GGG | - | chr6.1:33019794-33019813 | MS.gene87308:intron | 35.0% |
| !! | TTTCTTGTTCCTTTTGCTGT+AGG | - | chr6.1:33019793-33019812 | MS.gene87308:intron | 35.0% |
| !!! | ACATTTTTGGGTTGAGATCT+AGG | - | chr6.1:33019286-33019305 | MS.gene87308:intron | 35.0% |
| !!! | TGGTCCCTTAAGTCATTTTT+AGG | - | chr6.1:33022241-33022260 | MS.gene87308:intron | 35.0% |
| AAGTAAACGGACCCTAAGAA+TGG | + | chr6.1:33020763-33020782 | None:intergenic | 40.0% | |
| AATAACTATTGACCGCTTGG+TGG | + | chr6.1:33021186-33021205 | None:intergenic | 40.0% | |
| AATCCTCTTTCCTGAATCAG+TGG | - | chr6.1:33022155-33022174 | MS.gene87308:intron | 40.0% | |
| AGAATCACTGTTGCCATCAA+AGG | + | chr6.1:33022105-33022124 | None:intergenic | 40.0% | |
| AGGGCTATAAATACCACTCT+TGG | + | chr6.1:33018547-33018566 | None:intergenic | 40.0% | |
| AGGTTCTCCAACCAGTTAAA+GGG | - | chr6.1:33022598-33022617 | MS.gene87308:intron | 40.0% | |
| ATCTCTCGAATGCTACTCAA+GGG | - | chr6.1:33022127-33022146 | MS.gene87308:intron | 40.0% | |
| ATGGGCTTGAAAAAGATAGG+CGG | - | chr6.1:33022034-33022053 | MS.gene87308:intron | 40.0% | |
| CAAAAAGACCCTACAGCAAA+AGG | + | chr6.1:33019805-33019824 | None:intergenic | 40.0% | |
| CACTCTTGGAATCATTCTCA+AGG | + | chr6.1:33018533-33018552 | None:intergenic | 40.0% | |
| CATTCAGAAATCCGTCACAT+TGG | + | chr6.1:33020660-33020679 | None:intergenic | 40.0% | |
| CCATAATGCATGACCTGTAA+AGG | + | chr6.1:33022018-33022037 | None:intergenic | 40.0% | |
| CCTTTACAGGTCATGCATTA+TGG | - | chr6.1:33022015-33022034 | MS.gene87308:intron | 40.0% | |
| CGACATGTACCATAGTAATC+AGG | + | chr6.1:33022870-33022889 | None:intergenic | 40.0% | |
| CTTAATGTAGGCCAATGTGA+CGG | - | chr6.1:33020646-33020665 | MS.gene87308:intron | 40.0% | |
| CTTGAGAATGATTCCAAGAG+TGG | - | chr6.1:33018531-33018550 | MS.gene87308:CDS | 40.0% | |
| GAAAACCTTCACCTCAAAGT+CGG | + | chr6.1:33019358-33019377 | None:intergenic | 40.0% | |
| GGACCGTTAATATATTCCCA+AGG | + | chr6.1:33018742-33018761 | None:intergenic | 40.0% | |
| GGCCCTTGGGAATATATTAA+CGG | - | chr6.1:33018736-33018755 | MS.gene87308:intron | 40.0% | |
| GTGGTATTTATAGCCCTTTG+TGG | - | chr6.1:33018550-33018569 | MS.gene87308:intron | 40.0% | |
| GTTGGATCTCCTGATTACTA+TGG | - | chr6.1:33022858-33022877 | MS.gene87308:intron | 40.0% | |
| TCATTGCTGCAACCACAATT+TGG | + | chr6.1:33019584-33019603 | None:intergenic | 40.0% | |
| TGGGAAAAAACCCTGAACTT+TGG | - | chr6.1:33021392-33021411 | MS.gene87308:intron | 40.0% | |
| TGGTGGCTATTCAAAGAAAG+AGG | - | chr6.1:33020409-33020428 | MS.gene87308:intron | 40.0% | |
| TTGGTATGTTGCAGTCTCAT+TGG | - | chr6.1:33019870-33019889 | MS.gene87308:intron | 40.0% | |
| ! | ACATATCGCCTTTAAGGACA+GGG | + | chr6.1:33022692-33022711 | None:intergenic | 40.0% |
| ! | AGTTAGGTGGTGGTTAACTT+TGG | - | chr6.1:33018382-33018401 | MS.gene87308:CDS | 40.0% |
| ! | ATGCTTCTAGAAGCTGACTA+AGG | - | chr6.1:33018637-33018656 | MS.gene87308:intron | 40.0% |
| ! | ATGTTGCAGTCTCATTGGTT+TGG | - | chr6.1:33019875-33019894 | MS.gene87308:intron | 40.0% |
| ! | CAAAGGCTTTTTGTCGGATA+AGG | - | chr6.1:33019827-33019846 | MS.gene87308:intron | 40.0% |
| ! | CCAGGCTTTAATATGGGATT+GGG | - | chr6.1:33021373-33021392 | MS.gene87308:intron | 40.0% |
| ! | GCCTTATAAAACCGACTTTG+AGG | - | chr6.1:33019344-33019363 | MS.gene87308:intron | 40.0% |
| ! | GCTTCGTGATTCTTGATAGT+GGG | - | chr6.1:33019612-33019631 | MS.gene87308:intron | 40.0% |
| !! | CTTCGTGATTCTTGATAGTG+GGG | - | chr6.1:33019613-33019632 | MS.gene87308:intron | 40.0% |
| !! | GATTGTGTCTTAGGTTGACT+TGG | - | chr6.1:33021134-33021153 | MS.gene87308:intron | 40.0% |
| !! | TAAAACCGACTTTGAGGTGA+AGG | - | chr6.1:33019350-33019369 | MS.gene87308:intron | 40.0% |
| !! | TTCTAGAAGCATCTAGAAGC+AGG | + | chr6.1:33018629-33018648 | None:intergenic | 40.0% |
| ACTTAAGCTCCAAGCAAGCT+GGG | - | chr6.1:33018588-33018607 | MS.gene87308:intron | 45.0% | |
| AGAACTGCGTTCCCTTTAAC+TGG | + | chr6.1:33022612-33022631 | None:intergenic | 45.0% | |
| AGAGAACAGCAAGCCTTTAC+AGG | - | chr6.1:33022002-33022021 | MS.gene87308:intron | 45.0% | |
| ATCACAGGCAAATACTAGCG+TGG | + | chr6.1:33021931-33021950 | None:intergenic | 45.0% | |
| ATTTATAGCCCTTTGTGGGC+TGG | - | chr6.1:33018555-33018574 | MS.gene87308:intron | 45.0% | |
| ATTTGACCAGCTGCTACTCT+TGG | + | chr6.1:33022562-33022581 | None:intergenic | 45.0% | |
| CAAGAATCACGAAGCGATTG+TGG | + | chr6.1:33019607-33019626 | None:intergenic | 45.0% | |
| CAGACCACATATCGCCTTTA+AGG | + | chr6.1:33022698-33022717 | None:intergenic | 45.0% | |
| CATCTCTCGAATGCTACTCA+AGG | - | chr6.1:33022126-33022145 | MS.gene87308:intron | 45.0% | |
| CCCAATCCCATATTAAAGCC+TGG | + | chr6.1:33021376-33021395 | None:intergenic | 45.0% | |
| CGCTTCGTGATTCTTGATAG+TGG | - | chr6.1:33019611-33019630 | MS.gene87308:intron | 45.0% | |
| CTGTCCTTAAAGGCGATATG+TGG | - | chr6.1:33022691-33022710 | MS.gene87308:intron | 45.0% | |
| GAGATCCAACCATGTAGACA+GGG | + | chr6.1:33022848-33022867 | None:intergenic | 45.0% | |
| GAGGTTCTCCAACCAGTTAA+AGG | - | chr6.1:33022597-33022616 | MS.gene87308:intron | 45.0% | |
| GCTCTTACGTTTCACCTCAT+AGG | - | chr6.1:33021058-33021077 | MS.gene87308:intron | 45.0% | |
| GGGGTGATGTGGCAAAATAA+AGG | - | chr6.1:33020060-33020079 | MS.gene87308:intron | 45.0% | |
| GTGGTTGCATCAGCCATATT+TGG | - | chr6.1:33021619-33021638 | MS.gene87308:intron | 45.0% | |
| GTTACAAATGTGGGGTGATG+TGG | - | chr6.1:33020049-33020068 | MS.gene87308:intron | 45.0% | |
| TCCTGAATCAGTGGTGAGTA+CGG | - | chr6.1:33022164-33022183 | MS.gene87308:intron | 45.0% | |
| TCTCTCGAATGCTACTCAAG+GGG | - | chr6.1:33022128-33022147 | MS.gene87308:intron | 45.0% | |
| TGGACCATCTGCATTCCTAA+AGG | + | chr6.1:33018945-33018964 | None:intergenic | 45.0% | |
| ! | CACATATCGCCTTTAAGGAC+AGG | + | chr6.1:33022693-33022712 | None:intergenic | 45.0% |
| ! | CTTCTAGAAGCTGACTAAGG+CGG | - | chr6.1:33018640-33018659 | MS.gene87308:intron | 45.0% |
| ! | GCCAGGCTTTAATATGGGAT+TGG | - | chr6.1:33021372-33021391 | MS.gene87308:intron | 45.0% |
| ! | TATTGACCGCTTGGTGGAAA+AGG | + | chr6.1:33021180-33021199 | None:intergenic | 45.0% |
| ! | TGTGCCTTTAGGAATGCAGA+TGG | - | chr6.1:33018938-33018957 | MS.gene87308:intron | 45.0% |
| !! | TCACCACTGATTCAGGAAAG+AGG | + | chr6.1:33022161-33022180 | None:intergenic | 45.0% |
| !!! | GAGGTTTTAAACTGTGGTCG+CGG | + | chr6.1:33021681-33021700 | None:intergenic | 45.0% |
| !! | AAAAAAAAAAAAAAATTAAG+GGG | + | chr6.1:33022278-33022297 | None:intergenic | 5.0% |
| !! | GAAAAAAAAAAAAAAATTAA+GGG | + | chr6.1:33022279-33022298 | None:intergenic | 5.0% |
| AAGGCACAGATGCCTCAAGA+AGG | + | chr6.1:33018926-33018945 | None:intergenic | 50.0% | |
| ACGGTCTGCAATCGCAATTG+TGG | - | chr6.1:33021555-33021574 | MS.gene87308:intron | 50.0% | |
| AGGATGATAGTTGTCCCGCT+TGG | - | chr6.1:33022796-33022815 | MS.gene87308:intron | 50.0% | |
| AGGGAAAGTCTCAACTACGC+CGG | - | chr6.1:33022752-33022771 | MS.gene87308:intron | 50.0% | |
| AGGTCCGGTTGATCCCAATT+TGG | + | chr6.1:33022085-33022104 | None:intergenic | 50.0% | |
| CAACCACACTGACACAGTCA+CGG | + | chr6.1:33021606-33021625 | None:intergenic | 50.0% | |
| CAAGCATGGCCTCGAATCAT+TGG | + | chr6.1:33019026-33019045 | None:intergenic | 50.0% | |
| CAATGATTCGAGGCCATGCT+TGG | - | chr6.1:33019024-33019043 | MS.gene87308:CDS | 50.0% | |
| CACTGTTGCCATCAAAGGTC+CGG | + | chr6.1:33022100-33022119 | None:intergenic | 50.0% | |
| CAGAATGGCTCCAAAGGACT+AGG | + | chr6.1:33018684-33018703 | None:intergenic | 50.0% | |
| CAGCAACGGGAGAATGTCAA+CGG | - | chr6.1:33022820-33022839 | MS.gene87308:intron | 50.0% | |
| CGTGCTTTCAGATGCTTGCT+AGG | - | chr6.1:33018859-33018878 | MS.gene87308:intron | 50.0% | |
| CTCTCGAATGCTACTCAAGG+GGG | - | chr6.1:33022129-33022148 | MS.gene87308:intron | 50.0% | |
| CTGCGTTCCCTTTAACTGGT+TGG | + | chr6.1:33022608-33022627 | None:intergenic | 50.0% | |
| GACTTAAGCTCCAAGCAAGC+TGG | - | chr6.1:33018587-33018606 | MS.gene87308:intron | 50.0% | |
| GCGTGTAAGCTACTCTTGTC+AGG | + | chr6.1:33022663-33022682 | None:intergenic | 50.0% | |
| GGAGATCCAACCATGTAGAC+AGG | + | chr6.1:33022849-33022868 | None:intergenic | 50.0% | |
| GGATGATAGTTGTCCCGCTT+GGG | - | chr6.1:33022797-33022816 | MS.gene87308:intron | 50.0% | |
| TAAGCACGAGTCTTGGGACA+AGG | - | chr6.1:33018771-33018790 | MS.gene87308:intron | 50.0% | |
| TCAACGGAACCCTGTCTACA+TGG | - | chr6.1:33022836-33022855 | MS.gene87308:intron | 50.0% | |
| TGCAATCGCAATTGTGGCTG+CGG | - | chr6.1:33021561-33021580 | MS.gene87308:intron | 50.0% | |
| TGTAGGTCCTAACCTGCTCT+CGG | - | chr6.1:33021493-33021512 | MS.gene87308:intron | 50.0% | |
| TGTCCCAAGACTCGTGCTTA+GGG | + | chr6.1:33018771-33018790 | None:intergenic | 50.0% | |
| TTGTCCCAAGACTCGTGCTT+AGG | + | chr6.1:33018772-33018791 | None:intergenic | 50.0% | |
| TTTAAACTGTGGTCGCGGTC+CGG | + | chr6.1:33021676-33021695 | None:intergenic | 50.0% | |
| TTTCCGTGACTGTGTCAGTG+TGG | - | chr6.1:33021600-33021619 | MS.gene87308:intron | 50.0% | |
| ! | CCACAGTTTAAAACCTCGCC+TGG | - | chr6.1:33021684-33021703 | MS.gene87308:intron | 50.0% |
| ! | CTTGAGGCATCTGTGCCTTT+AGG | - | chr6.1:33018927-33018946 | MS.gene87308:intron | 50.0% |
| ! | GATCTAAAGCCCAGCTTGCT+TGG | + | chr6.1:33018600-33018619 | None:intergenic | 50.0% |
| ! | GCTTTCAGATGCTTGCTAGG+CGG | - | chr6.1:33018862-33018881 | MS.gene87308:intron | 50.0% |
| ! | GTGATAATGATGTCCAGGCG+AGG | + | chr6.1:33021700-33021719 | None:intergenic | 50.0% |
| !! | CTAGTCCTTTGGAGCCATTC+TGG | - | chr6.1:33018682-33018701 | MS.gene87308:intron | 50.0% |
| !! | TCCTTTGGAGCCATTCTGGA+GGG | - | chr6.1:33018686-33018705 | MS.gene87308:intron | 50.0% |
| !!! | CCAGGCGAGGTTTTAAACTG+TGG | + | chr6.1:33021687-33021706 | None:intergenic | 50.0% |
| AAAGCCCTCCAGAAAGGCTC+AGG | + | chr6.1:33018714-33018733 | None:intergenic | 55.0% | |
| AAGAAGGCTCCCTGAAGCTC+GGG | + | chr6.1:33018910-33018929 | None:intergenic | 55.0% | |
| ACGCTGTAACCAGCCCACAA+AGG | + | chr6.1:33018567-33018586 | None:intergenic | 55.0% | |
| AGCTTCAGGGAGCCTTCTTG+AGG | - | chr6.1:33018911-33018930 | MS.gene87308:intron | 55.0% | |
| CAAGAAGGCTCCCTGAAGCT+CGG | + | chr6.1:33018911-33018930 | None:intergenic | 55.0% | |
| CACAGACCAAGAGTAGCAGC+TGG | - | chr6.1:33022553-33022572 | MS.gene87308:intron | 55.0% | |
| CAGCTGCTACTCTTGGTCTG+TGG | + | chr6.1:33022555-33022574 | None:intergenic | 55.0% | |
| CAGTTGGGCAACCTGCTATC+AGG | + | chr6.1:33019255-33019274 | None:intergenic | 55.0% | |
| CGCTGTAACCAGCCCACAAA+GGG | + | chr6.1:33018566-33018585 | None:intergenic | 55.0% | |
| CGGAACCCTGTCTACATGGT+TGG | - | chr6.1:33022840-33022859 | MS.gene87308:intron | 55.0% | |
| GCTCGATGCCCTGTCCTTAA+AGG | - | chr6.1:33022681-33022700 | MS.gene87308:intron | 55.0% | |
| GGGATCAACCGGACCTTTGA+TGG | - | chr6.1:33022089-33022108 | MS.gene87308:intron | 55.0% | |
| GTCACCGCTATCAGACCACT+CGG | + | chr6.1:33019233-33019252 | None:intergenic | 55.0% | |
| GTCCCAAGACTCGTGCTTAG+GGG | + | chr6.1:33018770-33018789 | None:intergenic | 55.0% | |
| TCACCGCTATCAGACCACTC+GGG | + | chr6.1:33019232-33019251 | None:intergenic | 55.0% | |
| TCCCAAGACTCGTGCTTAGG+GGG | + | chr6.1:33018769-33018788 | None:intergenic | 55.0% | |
| ! | AGCCTTTCTGGAGGGCTTTC+AGG | - | chr6.1:33018715-33018734 | MS.gene87308:intron | 55.0% |
| ! | CCAGAGCCTTTTCCACCAAG+CGG | - | chr6.1:33021171-33021190 | MS.gene87308:intron | 55.0% |
| ! | GATAGCGGTGACCTGATAGC+AGG | - | chr6.1:33019241-33019260 | MS.gene87308:CDS | 55.0% |
| ! | GCAGGTTGCCCAACTGATTC+TGG | - | chr6.1:33019259-33019278 | MS.gene87308:intron | 55.0% |
| ! | TTCAGATGCTTGCTAGGCGG+CGG | - | chr6.1:33018865-33018884 | MS.gene87308:intron | 55.0% |
| !! | GCCGTACTCACCACTGATTC+AGG | + | chr6.1:33022168-33022187 | None:intergenic | 55.0% |
| !! | GTCCTTTGGAGCCATTCTGG+AGG | - | chr6.1:33018685-33018704 | MS.gene87308:intron | 55.0% |
| ACTCGGGCCATGCTCCAGAT+GGG | + | chr6.1:33019216-33019235 | None:intergenic | 60.0% | |
| AGCAGAGCCGAGAGCAGGTT+AGG | + | chr6.1:33021503-33021522 | None:intergenic | 60.0% | |
| AGCCCCCTAAGCACGAGTCT+TGG | - | chr6.1:33018764-33018783 | MS.gene87308:intron | 60.0% | |
| AGGGACACACCCGAGCTTCA+GGG | - | chr6.1:33018898-33018917 | MS.gene87308:intron | 60.0% | |
| ATGCTCCAGATGGGCGTGAG+GGG | + | chr6.1:33019207-33019226 | None:intergenic | 60.0% | |
| CAAACAGCAGAGCCGAGAGC+AGG | + | chr6.1:33021508-33021527 | None:intergenic | 60.0% | |
| CATGCTCCAGATGGGCGTGA+GGG | + | chr6.1:33019208-33019227 | None:intergenic | 60.0% | |
| GCCCCCTAAGCACGAGTCTT+GGG | - | chr6.1:33018765-33018784 | MS.gene87308:intron | 60.0% | |
| GCCCTCCAGAATGGCTCCAA+AGG | + | chr6.1:33018690-33018709 | None:intergenic | 60.0% | |
| GGCCTGAAAGCCCTCCAGAA+AGG | + | chr6.1:33018720-33018739 | None:intergenic | 60.0% | |
| TGGAGGGCTTTCAGGCCCTT+GGG | - | chr6.1:33018723-33018742 | MS.gene87308:intron | 60.0% | |
| TGGCCCGAGTGGTCTGATAG+CGG | - | chr6.1:33019226-33019245 | MS.gene87308:CDS | 60.0% | |
| TTCTCCCGTTGCTGCCCAAG+CGG | + | chr6.1:33022814-33022833 | None:intergenic | 60.0% | |
| TTGTCCCGCTTGGGCAGCAA+CGG | - | chr6.1:33022806-33022825 | MS.gene87308:intron | 60.0% | |
| ! | CCGCTTGGTGGAAAAGGCTC+TGG | + | chr6.1:33021174-33021193 | None:intergenic | 60.0% |
| ACTAAGGCGGCGCCTCTGGA+AGG | - | chr6.1:33018653-33018672 | MS.gene87308:intron | 65.0% | |
| CACTCGGGCCATGCTCCAGA+TGG | + | chr6.1:33019217-33019236 | None:intergenic | 65.0% | |
| CCATGCTCCAGATGGGCGTG+AGG | + | chr6.1:33019209-33019228 | None:intergenic | 65.0% | |
| CTGGAGGGCTTTCAGGCCCT+TGG | - | chr6.1:33018722-33018741 | MS.gene87308:intron | 65.0% | |
| GACTCGTGCTTAGGGGGCTG+TGG | + | chr6.1:33018763-33018782 | None:intergenic | 65.0% | |
| GAGGGACACACCCGAGCTTC+AGG | - | chr6.1:33018897-33018916 | MS.gene87308:intron | 65.0% | |
| GGCGCCTGAGCCTTTCTGGA+GGG | - | chr6.1:33018707-33018726 | MS.gene87308:intron | 65.0% | |
| TACACCCCCTCACGCCCATC+TGG | - | chr6.1:33019199-33019218 | MS.gene87308:intron | 65.0% | |
| TCTCCCGTTGCTGCCCAAGC+GGG | + | chr6.1:33022813-33022832 | None:intergenic | 65.0% | |
| TGCTCCAGATGGGCGTGAGG+GGG | + | chr6.1:33019206-33019225 | None:intergenic | 65.0% | |
| TGTCCCGCTTGGGCAGCAAC+GGG | - | chr6.1:33022807-33022826 | MS.gene87308:intron | 65.0% | |
| ! | CATCTGGAGCATGGCCCGAG+TGG | - | chr6.1:33019215-33019234 | MS.gene87308:CDS | 65.0% |
| ! | CCTCACGCCCATCTGGAGCA+TGG | - | chr6.1:33019206-33019225 | MS.gene87308:intron | 65.0% |
| ! | CTAAGGCGGCGCCTCTGGAA+GGG | - | chr6.1:33018654-33018673 | MS.gene87308:intron | 65.0% |
| ! | GAAGGGCGCGCCTAGTCCTT+TGG | - | chr6.1:33018671-33018690 | MS.gene87308:intron | 65.0% |
| CTCGGGTGTGTCCCTCCGAG+AGG | + | chr6.1:33018893-33018912 | None:intergenic | 70.0% | |
| GACTAGGCGCGCCCTTCCAG+AGG | + | chr6.1:33018668-33018687 | None:intergenic | 70.0% | |
| GCTGACTAAGGCGGCGCCTC+TGG | - | chr6.1:33018649-33018668 | MS.gene87308:intron | 70.0% | |
| GGCTCAGGCGCCCTCCAGAA+TGG | + | chr6.1:33018699-33018718 | None:intergenic | 70.0% | |
| GGGCGCCTGAGCCTTTCTGG+AGG | - | chr6.1:33018706-33018725 | MS.gene87308:intron | 70.0% | |
| TGCTAGGCGGCGGTGCCTCT+CGG | - | chr6.1:33018875-33018894 | MS.gene87308:intron | 70.0% | |
| !! | GGAGGGCGCCTGAGCCTTTC+TGG | - | chr6.1:33018703-33018722 | MS.gene87308:intron | 70.0% |
| AGGCGGCGGTGCCTCTCGGA+GGG | - | chr6.1:33018879-33018898 | MS.gene87308:intron | 75.0% | |
| TAGGCGGCGGTGCCTCTCGG+AGG | - | chr6.1:33018878-33018897 | MS.gene87308:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 33018213 | 33022911 | 33018213 | ID=MS.gene87308 |
| chr6.1 | mRNA | 33018213 | 33022911 | 33018213 | ID=MS.gene87308.t1;Parent=MS.gene87308 |
| chr6.1 | exon | 33022904 | 33022911 | 33022904 | ID=MS.gene87308.t1.exon1;Parent=MS.gene87308.t1 |
| chr6.1 | CDS | 33022904 | 33022911 | 33022904 | ID=cds.MS.gene87308.t1;Parent=MS.gene87308.t1 |
| chr6.1 | exon | 33021252 | 33021309 | 33021252 | ID=MS.gene87308.t1.exon2;Parent=MS.gene87308.t1 |
| chr6.1 | CDS | 33021252 | 33021309 | 33021252 | ID=cds.MS.gene87308.t1;Parent=MS.gene87308.t1 |
| chr6.1 | exon | 33020673 | 33020738 | 33020673 | ID=MS.gene87308.t1.exon3;Parent=MS.gene87308.t1 |
| chr6.1 | CDS | 33020673 | 33020738 | 33020673 | ID=cds.MS.gene87308.t1;Parent=MS.gene87308.t1 |
| chr6.1 | exon | 33019214 | 33019271 | 33019214 | ID=MS.gene87308.t1.exon4;Parent=MS.gene87308.t1 |
| chr6.1 | CDS | 33019214 | 33019271 | 33019214 | ID=cds.MS.gene87308.t1;Parent=MS.gene87308.t1 |
| chr6.1 | exon | 33018948 | 33019120 | 33018948 | ID=MS.gene87308.t1.exon5;Parent=MS.gene87308.t1 |
| chr6.1 | CDS | 33018948 | 33019120 | 33018948 | ID=cds.MS.gene87308.t1;Parent=MS.gene87308.t1 |
| chr6.1 | exon | 33018213 | 33018566 | 33018213 | ID=MS.gene87308.t1.exon6;Parent=MS.gene87308.t1 |
| chr6.1 | CDS | 33018213 | 33018566 | 33018213 | ID=cds.MS.gene87308.t1;Parent=MS.gene87308.t1 |
| Gene Sequence |
| Protein sequence |
