Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87665.t1 | AFK39349.1 | 93.8 | 274 | 17 | 0 | 1 | 274 | 1 | 274 | 1.90E-138 | 501.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87665.t1 | Q06881 | 27.0 | 185 | 114 | 6 | 91 | 268 | 11 | 181 | 2.3e-07 | 57.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87665.t1 | I3SGF7 | 93.8 | 274 | 17 | 0 | 1 | 274 | 1 | 274 | 1.4e-138 | 501.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052078 | MS.gene87665 | 0.805602 | 1.23E-49 | -1.69E-46 |
MS.gene054376 | MS.gene87665 | 0.800937 | 1.14E-48 | -1.69E-46 |
MS.gene057295 | MS.gene87665 | 0.810118 | 1.35E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87665.t1 | MTR_3g071960 | 96.350 | 274 | 10 | 0 | 1 | 274 | 1 | 274 | 0.0 | 539 |
MS.gene87665.t1 | MTR_5g083520 | 56.655 | 293 | 94 | 5 | 1 | 274 | 1 | 279 | 8.07e-100 | 293 |
MS.gene87665.t1 | MTR_2g103280 | 40.796 | 201 | 103 | 6 | 78 | 274 | 85 | 273 | 6.91e-36 | 129 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87665.t1 | AT3G56130 | 51.748 | 286 | 117 | 7 | 1 | 273 | 1 | 278 | 1.64e-83 | 252 |
MS.gene87665.t1 | AT3G56130 | 61.376 | 189 | 69 | 2 | 87 | 273 | 16 | 202 | 1.53e-73 | 224 |
MS.gene87665.t1 | AT3G56130 | 49.813 | 267 | 113 | 7 | 1 | 254 | 1 | 259 | 8.29e-70 | 217 |
MS.gene87665.t1 | AT3G56130 | 61.765 | 170 | 61 | 2 | 106 | 273 | 24 | 191 | 7.75e-64 | 199 |
MS.gene87665.t1 | AT3G56130 | 48.770 | 244 | 106 | 6 | 1 | 231 | 1 | 238 | 1.25e-61 | 195 |
MS.gene87665.t1 | AT3G15690 | 35.021 | 237 | 125 | 6 | 44 | 274 | 47 | 260 | 4.58e-38 | 135 |
MS.gene87665.t1 | AT1G52670 | 33.603 | 247 | 126 | 6 | 44 | 274 | 47 | 271 | 7.93e-37 | 132 |
MS.gene87665.t1 | AT3G15690 | 33.641 | 217 | 115 | 6 | 44 | 254 | 47 | 240 | 7.57e-29 | 110 |
MS.gene87665.t1 | AT3G15690 | 33.641 | 217 | 115 | 6 | 44 | 254 | 49 | 242 | 8.00e-29 | 110 |
Find 83 sgRNAs with CRISPR-Local
Find 400 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATCGCTGAACTGAAATTAA+AGG | 0.222112 | 3.1:+58753372 | MS.gene87665:CDS |
TAGGGTATTTGGATCAGTTT+GGG | 0.235486 | 3.1:+58755616 | MS.gene87665:CDS |
TTATGATGTTGCAGCTTCTT+TGG | 0.242654 | 3.1:+58753001 | MS.gene87665:intron |
ATTTGGATCAGTTTGGGGTT+GGG | 0.253199 | 3.1:+58755622 | MS.gene87665:CDS |
AGGGCAGGTGATAGGGTATT+TGG | 0.267426 | 3.1:+58755605 | MS.gene87665:CDS |
CGAAGAGGTAGAACAGTTAA+AGG | 0.268440 | 3.1:+58754549 | MS.gene87665:CDS |
ATCAGAGAAGGGCAGGTGAT+AGG | 0.331181 | 3.1:+58755597 | MS.gene87665:CDS |
TTTGGATCAGTTTGGGGTTG+GGG | 0.336376 | 3.1:+58755623 | MS.gene87665:CDS |
TTAATAGCATTGGAGGCTTC+TGG | 0.341297 | 3.1:+58754353 | MS.gene87665:CDS |
CTTTAACTGTTCTACCTCTT+CGG | 0.359167 | 3.1:-58754548 | None:intergenic |
TATTTGGATCAGTTTGGGGT+TGG | 0.383931 | 3.1:+58755621 | MS.gene87665:CDS |
AATCACCTTAACGGGAATTC+CGG | 0.390251 | 3.1:-58755646 | None:intergenic |
TGTGAGGAAACATTTGCAAA+TGG | 0.398621 | 3.1:-58754317 | None:intergenic |
ATAGGGTATTTGGATCAGTT+TGG | 0.409842 | 3.1:+58755615 | MS.gene87665:CDS |
CACATGGGATATAGTGCCTA+TGG | 0.412872 | 3.1:-58752047 | None:intergenic |
GTCATCAAAGTTAATAGCAT+TGG | 0.430024 | 3.1:+58754343 | MS.gene87665:CDS |
CTATAAACCTCAAATCCATT+AGG | 0.431878 | 3.1:-58753077 | None:intergenic |
TGATGGCAAGACGGCAAGAA+TGG | 0.434866 | 3.1:-58756710 | None:intergenic |
GATCAGTTTGGGGTTGGGGC+CGG | 0.436551 | 3.1:+58755627 | MS.gene87665:CDS |
TCCATAGGTTTGCTTGGAAT+AGG | 0.443596 | 3.1:-58754233 | None:intergenic |
GATTCATCCATAGGTTTGCT+TGG | 0.448037 | 3.1:-58754239 | None:intergenic |
CAGTGAAAGGATCGAATGGC+AGG | 0.450613 | 3.1:-58750909 | None:intergenic |
AGACACCAAATCACCTTAAC+GGG | 0.451183 | 3.1:-58755654 | None:intergenic |
ATCAGATGGAACTCTAATAG+AGG | 0.451293 | 3.1:+58752112 | MS.gene87665:CDS |
ATCAATTACCTCTTTACAGA+TGG | 0.453969 | 3.1:-58754586 | None:intergenic |
CAGACACCAAATCACCTTAA+CGG | 0.461717 | 3.1:-58755655 | None:intergenic |
TCAGAGAAGGGCAGGTGATA+GGG | 0.463235 | 3.1:+58755598 | MS.gene87665:CDS |
GGAATAGGTGGTGGTGTAGT+TGG | 0.466311 | 3.1:-58754218 | None:intergenic |
AATGGCAGGGGAGGAATCCA+TGG | 0.477861 | 3.1:-58750895 | None:intergenic |
TACTTAATGTCATGGAATGA+TGG | 0.480273 | 3.1:-58756727 | None:intergenic |
TGGGGCCGGAATTCCCGTTA+AGG | 0.484273 | 3.1:+58755641 | MS.gene87665:CDS |
ACCTATTCCAAGCAAACCTA+TGG | 0.486223 | 3.1:+58754232 | MS.gene87665:CDS |
TGCTGGATTACTTAATGTCA+TGG | 0.486608 | 3.1:-58756735 | None:intergenic |
ATCAAAGTTAATAGCATTGG+AGG | 0.488425 | 3.1:+58754346 | MS.gene87665:CDS |
AACTACAGCTGCCCTCTCAA+TGG | 0.493028 | 3.1:-58752077 | None:intergenic |
GAAGAGGTAGAACAGTTAAA+GGG | 0.496514 | 3.1:+58754550 | MS.gene87665:CDS |
GATGGCAAGACGGCAAGAAT+GGG | 0.499367 | 3.1:-58756709 | None:intergenic |
GTGAGGAAACATTTGCAAAT+GGG | 0.503793 | 3.1:-58754316 | None:intergenic |
ATGGGATCTCCAAAACCAAC+AGG | 0.504413 | 3.1:-58756691 | None:intergenic |
AGATACTAACGCGTATGTAT+TGG | 0.510108 | 3.1:-58754378 | None:intergenic |
GAAGAGAGAATTACAGTGAA+AGG | 0.529842 | 3.1:-58750922 | None:intergenic |
TGATGTAATCAGAGAAGGGC+AGG | 0.532614 | 3.1:+58755590 | MS.gene87665:CDS |
TCCCGCGCTGATTCATCCAT+AGG | 0.538853 | 3.1:-58754248 | None:intergenic |
GGAAACATTTGCAAATGGGT+TGG | 0.539687 | 3.1:-58754312 | None:intergenic |
GAAGATGATGTTGGTGGCAA+TGG | 0.542424 | 3.1:-58754281 | None:intergenic |
GCATCCTCCCATCTGTAAAG+AGG | 0.544414 | 3.1:+58754578 | MS.gene87665:CDS |
AGGGTATTTGGATCAGTTTG+GGG | 0.545464 | 3.1:+58755617 | MS.gene87665:CDS |
CGCGTTAGTATCTTCTCCTA+CGG | 0.548310 | 3.1:+58754388 | MS.gene87665:CDS |
TTCCCTGCCATAAAATCAGA+TGG | 0.550122 | 3.1:+58752098 | MS.gene87665:CDS |
GGAAAAGTAGCAGTTTGCAA+TGG | 0.552260 | 3.1:-58753056 | None:intergenic |
ATAAAACCCACCATCAGACT+TGG | 0.556633 | 3.1:-58752185 | None:intergenic |
ATGCATCTTAAGCGTAACAT+TGG | 0.563677 | 3.1:+58754164 | MS.gene87665:CDS |
ATAGGTTTGCTTGGAATAGG+TGG | 0.563737 | 3.1:-58754230 | None:intergenic |
ACCTATGGATGAATCAGCGC+GGG | 0.565173 | 3.1:+58754247 | MS.gene87665:CDS |
GTTAAAGCTACTTGTTGAGG+AGG | 0.567637 | 3.1:+58755767 | MS.gene87665:CDS |
TCTCAATGGAGGATCGCACA+TGG | 0.577880 | 3.1:-58752063 | None:intergenic |
TAGGGTGATGTAATCAGAGA+AGG | 0.578018 | 3.1:+58755585 | MS.gene87665:intron |
TCAATTACCTCTTTACAGAT+GGG | 0.582011 | 3.1:-58754585 | None:intergenic |
ATCAACACAGCCAAGTCTGA+TGG | 0.586127 | 3.1:+58752175 | MS.gene87665:CDS |
GGTTTGCTTGGAATAGGTGG+TGG | 0.586956 | 3.1:-58754227 | None:intergenic |
TCAGATGGAACTCTAATAGA+GGG | 0.589130 | 3.1:+58752113 | MS.gene87665:CDS |
TGTTGGATTCCAGATCCCAT+AGG | 0.590965 | 3.1:+58752031 | MS.gene87665:intron |
AGTGTTAAAGCTACTTGTTG+AGG | 0.599622 | 3.1:+58755764 | MS.gene87665:CDS |
ATGTGCGATCCTCCATTGAG+AGG | 0.601948 | 3.1:+58752065 | MS.gene87665:CDS |
TTAAAGCTACTTGTTGAGGA+GGG | 0.602478 | 3.1:+58755768 | MS.gene87665:CDS |
AAAGGATCGAATGGCAGGGG+AGG | 0.602751 | 3.1:-58750904 | None:intergenic |
GTGAAAGGATCGAATGGCAG+GGG | 0.603019 | 3.1:-58750907 | None:intergenic |
ACATGGGATATAGTGCCTAT+GGG | 0.604513 | 3.1:-58752046 | None:intergenic |
TGTGCGATCCTCCATTGAGA+GGG | 0.605136 | 3.1:+58752066 | MS.gene87665:CDS |
ATGGCAGGGGAGGAATCCAT+GGG | 0.607748 | 3.1:-58750894 | None:intergenic |
CTCAATGGAGGATCGCACAT+GGG | 0.611238 | 3.1:-58752062 | None:intergenic |
AAGCTACTTGTTGAGGAGGG+AGG | 0.613027 | 3.1:+58755771 | MS.gene87665:CDS |
GTCATGGAATGATGGCAAGA+CGG | 0.617872 | 3.1:-58756719 | None:intergenic |
TAATAGAGGGAAGAAGACAT+TGG | 0.618516 | 3.1:+58752126 | MS.gene87665:CDS |
ATTACCTCTTTACAGATGGG+AGG | 0.626929 | 3.1:-58754582 | None:intergenic |
ATTACAGTGAAAGGATCGAA+TGG | 0.628337 | 3.1:-58750913 | None:intergenic |
AGTGAAAGGATCGAATGGCA+GGG | 0.629397 | 3.1:-58750908 | None:intergenic |
AGGGTGATGTAATCAGAGAA+GGG | 0.632126 | 3.1:+58755586 | MS.gene87665:intron |
TACAGCTGCCCTCTCAATGG+AGG | 0.632332 | 3.1:-58752074 | None:intergenic |
GTTGGTGAAATGTTAGACAA+TGG | 0.657212 | 3.1:-58754200 | None:intergenic |
TAGGTTGGCTCATTCCGAAG+AGG | 0.666646 | 3.1:+58754534 | MS.gene87665:intron |
TGTTGGTGGCAATGGCTGTG+CGG | 0.728608 | 3.1:-58754273 | None:intergenic |
AACCTATGGATGAATCAGCG+CGG | 0.738428 | 3.1:+58754246 | MS.gene87665:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTAAATTTTATTTAAA+CGG | + | chr3.1:58751539-58751558 | MS.gene87665:intron | 0.0% |
!! | AATGTATAGTAATAAAATTA+TGG | + | chr3.1:58753439-58753458 | MS.gene87665:intron | 10.0% |
!! | ATATAATTGATATAGTAATT+AGG | + | chr3.1:58752659-58752678 | MS.gene87665:intron | 10.0% |
!! | ATGTATAGTAATAAAATTAT+GGG | + | chr3.1:58753440-58753459 | MS.gene87665:intron | 10.0% |
!! | TATGTTTATAATATAAGTTA+TGG | - | chr3.1:58751873-58751892 | None:intergenic | 10.0% |
!!! | AGTTCATTTTATTTAATATA+TGG | + | chr3.1:58756455-58756474 | MS.gene87665:intron | 10.0% |
!!! | TTATTTTTCATTTAATAAGT+TGG | + | chr3.1:58755047-58755066 | MS.gene87665:intron | 10.0% |
!! | AAAAAAGAAAAAGAAAAAAC+AGG | + | chr3.1:58754968-58754987 | MS.gene87665:intron | 15.0% |
!! | ATACTAAACATGAAAAATTA+TGG | - | chr3.1:58756197-58756216 | None:intergenic | 15.0% |
!! | ATATATACTTCTAATAAATC+TGG | - | chr3.1:58752701-58752720 | None:intergenic | 15.0% |
!! | GTCAAAATATAAATAAAACA+AGG | - | chr3.1:58754127-58754146 | None:intergenic | 15.0% |
!! | TATCATTAAATATAGTAGTT+AGG | + | chr3.1:58752718-58752737 | MS.gene87665:intron | 15.0% |
!! | TGATTAGGAAATTATATAAA+AGG | + | chr3.1:58752601-58752620 | MS.gene87665:intron | 15.0% |
!! | TTTATATAATTTCCTAATCA+GGG | - | chr3.1:58752601-58752620 | None:intergenic | 15.0% |
!!! | AAAGTAAATATTTGTTGTTT+AGG | + | chr3.1:58754773-58754792 | MS.gene87665:intron | 15.0% |
!!! | AAGTAAATATTTGTTGTTTA+GGG | + | chr3.1:58754774-58754793 | MS.gene87665:intron | 15.0% |
!!! | AAGTATTCATTTTTTGTAAA+AGG | - | chr3.1:58753608-58753627 | None:intergenic | 15.0% |
!!! | TATAAAATTACAAGTTTTCA+AGG | - | chr3.1:58753703-58753722 | None:intergenic | 15.0% |
!!! | TGAAAACTTGTAATTTTATA+GGG | + | chr3.1:58753703-58753722 | MS.gene87665:intron | 15.0% |
!!! | TGTTTTATTTATATTTTGAC+AGG | + | chr3.1:58754127-58754146 | MS.gene87665:intron | 15.0% |
!!! | TTATCCTTGTTATAATTTTA+GGG | - | chr3.1:58753746-58753765 | None:intergenic | 15.0% |
!!! | TTGAAAACTTGTAATTTTAT+AGG | + | chr3.1:58753702-58753721 | MS.gene87665:intron | 15.0% |
!!! | TTTATCCTTGTTATAATTTT+AGG | - | chr3.1:58753747-58753766 | None:intergenic | 15.0% |
!!! | TTTTATATAATTTCCTAATC+AGG | - | chr3.1:58752602-58752621 | None:intergenic | 15.0% |
!! | AAAATAAAGAAAAAGTAACG+TGG | - | chr3.1:58755034-58755053 | None:intergenic | 20.0% |
!! | ACTTTCACTATTTCAAAATT+TGG | - | chr3.1:58755903-58755922 | None:intergenic | 20.0% |
!! | AGTTAACAAGAAAAATGATT+AGG | - | chr3.1:58751655-58751674 | None:intergenic | 20.0% |
!! | ATTGTTGAAAAATGATACAT+TGG | + | chr3.1:58753140-58753159 | MS.gene87665:intron | 20.0% |
!! | CAAATCAAAATACTTTATGT+TGG | + | chr3.1:58753187-58753206 | MS.gene87665:intron | 20.0% |
!! | CAACATCATAAATAATTGTT+AGG | - | chr3.1:58752992-58753011 | None:intergenic | 20.0% |
!! | CTGTTCATATATTAAAACAT+TGG | + | chr3.1:58756218-58756237 | MS.gene87665:intron | 20.0% |
!! | GATGCAAATTATATATTCTT+TGG | + | chr3.1:58755343-58755362 | MS.gene87665:intron | 20.0% |
!! | TGATTGTACAGATAAATAAA+AGG | - | chr3.1:58753112-58753131 | None:intergenic | 20.0% |
!! | TTAACCCTAAAATTATAACA+AGG | + | chr3.1:58753739-58753758 | MS.gene87665:intron | 20.0% |
!! | TTATAACAAGGATAAATCTT+AGG | + | chr3.1:58753751-58753770 | MS.gene87665:intron | 20.0% |
!! | TTATAGCATACATAAATAGA+TGG | - | chr3.1:58754418-58754437 | None:intergenic | 20.0% |
!! | TTATATAATTTCCTAATCAG+GGG | - | chr3.1:58752600-58752619 | None:intergenic | 20.0% |
!! | TTATTGATAAAAGAAGAGAA+GGG | + | chr3.1:58752824-58752843 | MS.gene87665:intron | 20.0% |
!!! | AAAGTGAATAAATCTTTTGA+AGG | + | chr3.1:58753671-58753690 | MS.gene87665:intron | 20.0% |
!!! | AAGTGAATAAATCTTTTGAA+GGG | + | chr3.1:58753672-58753691 | MS.gene87665:intron | 20.0% |
!!! | ACAATATATTTTAGTTCACA+TGG | + | chr3.1:58756493-58756512 | MS.gene87665:intron | 20.0% |
!!! | AGGTATTCATTTTTTGTAAA+AGG | - | chr3.1:58753588-58753607 | None:intergenic | 20.0% |
!!! | ATGTTTTCAATTTCAACATA+GGG | + | chr3.1:58755567-58755586 | MS.gene87665:intron | 20.0% |
!!! | ATTTATATTGGTTCATCAAA+AGG | + | chr3.1:58754069-58754088 | MS.gene87665:intron | 20.0% |
!!! | CAAATACTGGATATTTTAAA+AGG | + | chr3.1:58751768-58751787 | MS.gene87665:intron | 20.0% |
!!! | CAATATATTTTAGTTCACAT+GGG | + | chr3.1:58756494-58756513 | MS.gene87665:intron | 20.0% |
!!! | TAATCATTTTTCTTGTTAAC+TGG | + | chr3.1:58751654-58751673 | MS.gene87665:intron | 20.0% |
!!! | TAATTAGGAGACAATAATTT+TGG | + | chr3.1:58752674-58752693 | MS.gene87665:intron | 20.0% |
!!! | TAGTAGGTTTCTATTTTTAA+AGG | + | chr3.1:58752527-58752546 | MS.gene87665:intron | 20.0% |
!!! | TTATTTATATTTTGACAGGT+TGG | + | chr3.1:58754131-58754150 | MS.gene87665:intron | 20.0% |
!!! | TTTATATTGGTTCATCAAAA+GGG | + | chr3.1:58754070-58754089 | MS.gene87665:intron | 20.0% |
! | AAAAAATGAACTGACACAAT+TGG | - | chr3.1:58754004-58754023 | None:intergenic | 25.0% |
! | AAAATTAAAAAAGACCCGTT+TGG | - | chr3.1:58753887-58753906 | None:intergenic | 25.0% |
! | AATCCAACAATAACGATTAA+GGG | - | chr3.1:58752020-58752039 | None:intergenic | 25.0% |
! | ACATAAAAAAGCAGTTACTT+TGG | - | chr3.1:58751453-58751472 | None:intergenic | 25.0% |
! | AGAACCAAAAATTGATGAAA+TGG | - | chr3.1:58755214-58755233 | None:intergenic | 25.0% |
! | AGTACCTATAAAAAGCAAAT+AGG | + | chr3.1:58753643-58753662 | MS.gene87665:intron | 25.0% |
! | ATCAGTTTGACACTAAAATA+TGG | - | chr3.1:58753285-58753304 | None:intergenic | 25.0% |
! | ATGATTGTGTTATCAAATAC+TGG | + | chr3.1:58751755-58751774 | MS.gene87665:intron | 25.0% |
! | GAACAAACTTGAATTACAAA+AGG | - | chr3.1:58753977-58753996 | None:intergenic | 25.0% |
! | GGCAAAACTGTAATTTATAT+TGG | + | chr3.1:58754057-58754076 | MS.gene87665:intron | 25.0% |
! | GTACCTATAAAAAGCAAATA+GGG | + | chr3.1:58753644-58753663 | MS.gene87665:intron | 25.0% |
! | GTTAAAATAGAGATTACTTG+AGG | - | chr3.1:58755982-58756001 | None:intergenic | 25.0% |
! | GTTATTGATAAAAGAAGAGA+AGG | + | chr3.1:58752823-58752842 | MS.gene87665:intron | 25.0% |
! | TAAAAGGAGAAATAAAGATG+AGG | + | chr3.1:58752617-58752636 | MS.gene87665:intron | 25.0% |
! | TAACAAGAAAAATGATTAGG+TGG | - | chr3.1:58751652-58751671 | None:intergenic | 25.0% |
! | TAATATAAGTTATGGTACAG+AGG | - | chr3.1:58751865-58751884 | None:intergenic | 25.0% |
! | TACTCAGTAACTTTATCTAA+TGG | + | chr3.1:58754036-58754055 | MS.gene87665:intron | 25.0% |
! | TATGAATGTTTGCAAACAAT+TGG | + | chr3.1:58755271-58755290 | MS.gene87665:intron | 25.0% |
! | TCACTTTGTAATAGAATCTT+TGG | + | chr3.1:58752747-58752766 | MS.gene87665:intron | 25.0% |
! | TCATTCAAATAGCAACAAAA+AGG | - | chr3.1:58752241-58752260 | None:intergenic | 25.0% |
! | TGATTAGATGTATCAAATCA+GGG | + | chr3.1:58751113-58751132 | MS.gene87665:intron | 25.0% |
! | TGTATGATATTCTAGTATCT+TGG | + | chr3.1:58756169-58756188 | MS.gene87665:intron | 25.0% |
! | TTAGATAAAGTTACTGAGTA+CGG | - | chr3.1:58754036-58754055 | None:intergenic | 25.0% |
! | TTGAGTGTATATATGCAATA+AGG | - | chr3.1:58755534-58755553 | None:intergenic | 25.0% |
! | TTGCAAAAAATTTGATCAGT+AGG | + | chr3.1:58752320-58752339 | MS.gene87665:intron | 25.0% |
! | TTTGTTTATTCCAAAGTTTG+TGG | + | chr3.1:58751244-58751263 | MS.gene87665:intron | 25.0% |
!! | AAGGGTATAATAGTATTGTT+CGG | + | chr3.1:58755877-58755896 | MS.gene87665:intron | 25.0% |
!! | ATAAAAAAGCAGTTACTTTG+GGG | - | chr3.1:58751451-58751470 | None:intergenic | 25.0% |
!! | CATAAAAAAGCAGTTACTTT+GGG | - | chr3.1:58751452-58751471 | None:intergenic | 25.0% |
!! | CATGTTTTCAATTTCAACAT+AGG | + | chr3.1:58755566-58755585 | MS.gene87665:intron | 25.0% |
!! | CTTTGGTATTATTAGTGTTT+TGG | + | chr3.1:58753409-58753428 | MS.gene87665:intron | 25.0% |
!! | GTATCCATTTCATCAATTTT+TGG | + | chr3.1:58755207-58755226 | MS.gene87665:intron | 25.0% |
!! | TCTTGAAAGCTACAATATTT+TGG | - | chr3.1:58753546-58753565 | None:intergenic | 25.0% |
!! | TGAAAACTCATGATTTTGTA+AGG | - | chr3.1:58753483-58753502 | None:intergenic | 25.0% |
!! | TGTAAAAGGTTTTCAAAACA+GGG | - | chr3.1:58753574-58753593 | None:intergenic | 25.0% |
!! | TTACTGTTTTGTGTTGTATA+TGG | + | chr3.1:58756659-58756678 | MS.gene87665:intron | 25.0% |
!! | TTGTAAAAGGTTTTCAAAAC+AGG | - | chr3.1:58753575-58753594 | None:intergenic | 25.0% |
!! | TTTTATAGGTACTATTTTCG+AGG | - | chr3.1:58753636-58753655 | None:intergenic | 25.0% |
!!! | CTTATTTTACTAGCTTATAG+AGG | - | chr3.1:58753836-58753855 | None:intergenic | 25.0% |
!!! | TTATATTGGTTCATCAAAAG+GGG | + | chr3.1:58754071-58754090 | MS.gene87665:intron | 25.0% |
!!! | TTGCTTTTTCCATGTAATTA+GGG | - | chr3.1:58756014-58756033 | None:intergenic | 25.0% |
!!! | TTTGCTTTTTCCATGTAATT+AGG | - | chr3.1:58756015-58756034 | None:intergenic | 25.0% |
AAAGATTATCTTCGATGTGA+GGG | - | chr3.1:58756341-58756360 | None:intergenic | 30.0% | |
AAATAGTGAAAGTAGTTGTG+TGG | + | chr3.1:58755910-58755929 | MS.gene87665:intron | 30.0% | |
AAATATATACATCTCCTGAC+TGG | + | chr3.1:58755702-58755721 | MS.gene87665:intron | 30.0% | |
AAATGCAACTGTGAAATCTT+AGG | - | chr3.1:58753254-58753273 | None:intergenic | 30.0% | |
AAGTAGCTTATAGCTTATAG+AGG | - | chr3.1:58753795-58753814 | None:intergenic | 30.0% | |
AATAAGCTAAAGACCACTTA+TGG | - | chr3.1:58756630-58756649 | None:intergenic | 30.0% | |
AATCGCTGAACTGAAATTAA+AGG | + | chr3.1:58753372-58753391 | MS.gene87665:CDS | 30.0% | |
ACAATATTTCTTACAGTGCA+CGG | - | chr3.1:58756284-58756303 | None:intergenic | 30.0% | |
ACACTAATAATACCAAAGAG+AGG | - | chr3.1:58753407-58753426 | None:intergenic | 30.0% | |
AGTAACACATCAATAAATCC+AGG | - | chr3.1:58755828-58755847 | None:intergenic | 30.0% | |
ATAACACAATCATTGTGTTG+GGG | - | chr3.1:58751748-58751767 | None:intergenic | 30.0% | |
ATAAGAATGTCATAGGAACT+TGG | - | chr3.1:58752962-58752981 | None:intergenic | 30.0% | |
ATAGTCATTTCAGAGAAAGT+GGG | - | chr3.1:58755471-58755490 | None:intergenic | 30.0% | |
ATCAATTACCTCTTTACAGA+TGG | - | chr3.1:58754589-58754608 | None:intergenic | 30.0% | |
ATTTGTCATACCAAACAAAG+AGG | + | chr3.1:58756305-58756324 | MS.gene87665:intron | 30.0% | |
CAAATATTTACTTTGTGCAC+TGG | - | chr3.1:58754767-58754786 | None:intergenic | 30.0% | |
CTATAAACCTCAAATCCATT+AGG | - | chr3.1:58753080-58753099 | None:intergenic | 30.0% | |
CTGATTAGATGTATCAAATC+AGG | + | chr3.1:58751112-58751131 | MS.gene87665:intron | 30.0% | |
GAATCCAACAATAACGATTA+AGG | - | chr3.1:58752021-58752040 | None:intergenic | 30.0% | |
GATAACACAATCATTGTGTT+GGG | - | chr3.1:58751749-58751768 | None:intergenic | 30.0% | |
GCATATTTGCCGTTAAAAAA+AGG | - | chr3.1:58756113-58756132 | None:intergenic | 30.0% | |
GCTTATTATATGACCATAAG+TGG | + | chr3.1:58756614-58756633 | MS.gene87665:intron | 30.0% | |
GGTGTCTGTTTATTTAATTG+TGG | + | chr3.1:58755670-58755689 | MS.gene87665:intron | 30.0% | |
GTCATCAAAGTTAATAGCAT+TGG | + | chr3.1:58754343-58754362 | MS.gene87665:CDS | 30.0% | |
TAAATGGATGACACTGTATA+TGG | + | chr3.1:58754101-58754120 | MS.gene87665:intron | 30.0% | |
TACTTAATGTCATGGAATGA+TGG | - | chr3.1:58756730-58756749 | None:intergenic | 30.0% | |
TAGCAATAGGGACTTAATAT+AGG | - | chr3.1:58751952-58751971 | None:intergenic | 30.0% | |
TAGCTAACCAAACTGAATAA+TGG | + | chr3.1:58754940-58754959 | MS.gene87665:intron | 30.0% | |
TATAGTCATTTCAGAGAAAG+TGG | - | chr3.1:58755472-58755491 | None:intergenic | 30.0% | |
TATTAGGAACAAGACAGAAT+AGG | + | chr3.1:58752779-58752798 | MS.gene87665:intron | 30.0% | |
TCAAGCAATAAGAATGTCAT+AGG | - | chr3.1:58752969-58752988 | None:intergenic | 30.0% | |
TCAATTACCTCTTTACAGAT+GGG | - | chr3.1:58754588-58754607 | None:intergenic | 30.0% | |
TGAATTACAAAAGGTCTGTT+TGG | - | chr3.1:58753968-58753987 | None:intergenic | 30.0% | |
TGATAACACAATCATTGTGT+TGG | - | chr3.1:58751750-58751769 | None:intergenic | 30.0% | |
TGTACTGTATTTGATACTAC+AGG | - | chr3.1:58756083-58756102 | None:intergenic | 30.0% | |
TGTTCATACAGTATAAGTTC+AGG | - | chr3.1:58754998-58755017 | None:intergenic | 30.0% | |
TTAACACATGCATGTTAACA+AGG | - | chr3.1:58754908-58754927 | None:intergenic | 30.0% | |
TTCACAGTTGCATTTATCAA+CGG | + | chr3.1:58753259-58753278 | MS.gene87665:intron | 30.0% | |
TTCTGTACCATTATTCAGTT+TGG | - | chr3.1:58754950-58754969 | None:intergenic | 30.0% | |
TTTCCAAAATAAAACCAGTC+AGG | - | chr3.1:58755719-58755738 | None:intergenic | 30.0% | |
TTTGGCAGTATAATGTAGTT+TGG | + | chr3.1:58755361-58755380 | MS.gene87665:intron | 30.0% | |
! | AAGTAATTCATGGTTTTCTG+GGG | + | chr3.1:58755849-58755868 | MS.gene87665:intron | 30.0% |
! | AAGTTTGTAGATGCTTTTCA+TGG | + | chr3.1:58751396-58751415 | MS.gene87665:intron | 30.0% |
! | ATCAAAGTTAATAGCATTGG+AGG | + | chr3.1:58754346-58754365 | MS.gene87665:CDS | 30.0% |
! | ATTGGCATATTTTCTATCAC+AGG | + | chr3.1:58755419-58755438 | MS.gene87665:intron | 30.0% |
! | ATTTAAGATGATGCTTCTTC+CGG | + | chr3.1:58751210-58751229 | MS.gene87665:intron | 30.0% |
! | ATTTTTCTTGTTAACTGGCT+TGG | + | chr3.1:58751659-58751678 | MS.gene87665:intron | 30.0% |
! | CAAGTAATTCATGGTTTTCT+GGG | + | chr3.1:58755848-58755867 | MS.gene87665:intron | 30.0% |
! | GCATTTTGTTGAAAAGACAA+GGG | - | chr3.1:58752940-58752959 | None:intergenic | 30.0% |
! | GTAATAGAATCTTTGGAAGT+AGG | + | chr3.1:58752754-58752773 | MS.gene87665:intron | 30.0% |
! | TAGAGTTCCATCTGATTTTA+TGG | - | chr3.1:58752108-58752127 | None:intergenic | 30.0% |
! | TCAAGTAATTCATGGTTTTC+TGG | + | chr3.1:58755847-58755866 | MS.gene87665:intron | 30.0% |
! | TCCAAATGATGGAAAATCAT+GGG | + | chr3.1:58756411-58756430 | MS.gene87665:intron | 30.0% |
! | TCTTTGGAAGTAGGATTATT+AGG | + | chr3.1:58752763-58752782 | MS.gene87665:intron | 30.0% |
! | TGTGTTACTCAAGTAATTCA+TGG | + | chr3.1:58755839-58755858 | MS.gene87665:intron | 30.0% |
! | TTCCAAATGATGGAAAATCA+TGG | + | chr3.1:58756410-58756429 | MS.gene87665:intron | 30.0% |
! | TTTTCTAACTATTGTTCACG+TGG | + | chr3.1:58756517-58756536 | MS.gene87665:intron | 30.0% |
!! | AAAGATGAGGCATTGTAAAA+TGG | + | chr3.1:58752630-58752649 | MS.gene87665:intron | 30.0% |
!! | AAGACTTTTAATTGCTGATG+AGG | + | chr3.1:58751139-58751158 | MS.gene87665:intron | 30.0% |
!! | ACTGTGGTAATGGTAATTAT+TGG | + | chr3.1:58755401-58755420 | MS.gene87665:intron | 30.0% |
!! | TAACTTTGATGACTTTTGTG+AGG | - | chr3.1:58754336-58754355 | None:intergenic | 30.0% |
!! | TGAAAGCTACAATATTTTGG+AGG | - | chr3.1:58753543-58753562 | None:intergenic | 30.0% |
!!! | AGTCCCTATTTGCTTTTTAT+AGG | - | chr3.1:58753650-58753669 | None:intergenic | 30.0% |
!!! | CATCCATGACCTTTTTTTAA+CGG | + | chr3.1:58756101-58756120 | MS.gene87665:intron | 30.0% |
!!! | GAAAAGCATCTACAAACTTT+TGG | - | chr3.1:58751395-58751414 | None:intergenic | 30.0% |
!!! | GTGTCTTTTAGTCTTAAGAA+TGG | - | chr3.1:58752291-58752310 | None:intergenic | 30.0% |
!!! | GTTTTTTCTGAAGATGATGT+TGG | - | chr3.1:58754293-58754312 | None:intergenic | 30.0% |
!!! | TACTTTTCCTAATGGATTTG+AGG | + | chr3.1:58753070-58753089 | MS.gene87665:CDS | 30.0% |
!!! | TTTTTTAACGGCAAATATGC+CGG | + | chr3.1:58756113-58756132 | MS.gene87665:intron | 30.0% |
AAACCTACTAACCAAGTGAT+TGG | - | chr3.1:58752517-58752536 | None:intergenic | 35.0% | |
AAGATTATCTTCGATGTGAG+GGG | - | chr3.1:58756340-58756359 | None:intergenic | 35.0% | |
ACCTATTGCTAAAATATGCC+TGG | + | chr3.1:58755807-58755826 | MS.gene87665:intron | 35.0% | |
ACTTAAAAACACTGGAGGAT+AGG | - | chr3.1:58754625-58754644 | None:intergenic | 35.0% | |
ACTTGTGCTAGTATCATTTG+TGG | + | chr3.1:58751832-58751851 | MS.gene87665:intron | 35.0% | |
AGAATATCATACACACGTCT+GGG | - | chr3.1:58756162-58756181 | None:intergenic | 35.0% | |
AGATACTAACGCGTATGTAT+TGG | - | chr3.1:58754381-58754400 | None:intergenic | 35.0% | |
AGATGACTTAAAAACACTGG+AGG | - | chr3.1:58754630-58754649 | None:intergenic | 35.0% | |
AGCAGATGACTTAAAAACAC+TGG | - | chr3.1:58754633-58754652 | None:intergenic | 35.0% | |
ATAAATAGATGGCATACCGT+AGG | - | chr3.1:58754407-58754426 | None:intergenic | 35.0% | |
ATAACTCTCATGTGGTTGTT+TGG | + | chr3.1:58752262-58752281 | MS.gene87665:intron | 35.0% | |
ATAAGCTTGTGAGAAAGTGA+CGG | + | chr3.1:58753858-58753877 | MS.gene87665:intron | 35.0% | |
ATATTAACAGACCCCTGATT+AGG | + | chr3.1:58752586-58752605 | MS.gene87665:intron | 35.0% | |
ATCAGATGGAACTCTAATAG+AGG | + | chr3.1:58752112-58752131 | MS.gene87665:CDS | 35.0% | |
ATGCATCTTAAGCGTAACAT+TGG | + | chr3.1:58754164-58754183 | MS.gene87665:CDS | 35.0% | |
ATGTAAAGCTTTACTCAGAG+TGG | + | chr3.1:58751469-58751488 | MS.gene87665:intron | 35.0% | |
ATTACAGTGAAAGGATCGAA+TGG | - | chr3.1:58750916-58750935 | None:intergenic | 35.0% | |
CAAAAGGGGAACACTTTAAA+TGG | + | chr3.1:58754085-58754104 | MS.gene87665:intron | 35.0% | |
CAAGACAGAATAGGAGATTT+AGG | + | chr3.1:58752788-58752807 | MS.gene87665:intron | 35.0% | |
CTAGCTAAGAGATGAAAAAG+GGG | - | chr3.1:58751629-58751648 | None:intergenic | 35.0% | |
CTGACAATGATGAGATTGTT+AGG | + | chr3.1:58751291-58751310 | MS.gene87665:intron | 35.0% | |
CTTGTGCTAGTATCATTTGT+GGG | + | chr3.1:58751833-58751852 | MS.gene87665:intron | 35.0% | |
CTTTAACTGTTCTACCTCTT+CGG | - | chr3.1:58754551-58754570 | None:intergenic | 35.0% | |
GAAAACTGTCATACACACAA+AGG | - | chr3.1:58751360-58751379 | None:intergenic | 35.0% | |
GAAAGATTATCTTCGATGTG+AGG | - | chr3.1:58756342-58756361 | None:intergenic | 35.0% | |
GAAGAGAGAATTACAGTGAA+AGG | - | chr3.1:58750925-58750944 | None:intergenic | 35.0% | |
GAAGAGGTAGAACAGTTAAA+GGG | + | chr3.1:58754550-58754569 | MS.gene87665:CDS | 35.0% | |
GATTGCAAACCCTAATTACA+TGG | + | chr3.1:58756002-58756021 | MS.gene87665:intron | 35.0% | |
GCTAGCTAAGAGATGAAAAA+GGG | - | chr3.1:58751630-58751649 | None:intergenic | 35.0% | |
GTGAGGAAACATTTGCAAAT+GGG | - | chr3.1:58754319-58754338 | None:intergenic | 35.0% | |
GTGTATATATGCAATAAGGC+TGG | - | chr3.1:58755530-58755549 | None:intergenic | 35.0% | |
TAAACAAAAACCAGCAGAAC+CGG | - | chr3.1:58751232-58751251 | None:intergenic | 35.0% | |
TAAGCAAACCAGACATAAGT+AGG | - | chr3.1:58753313-58753332 | None:intergenic | 35.0% | |
TAATAGAGGGAAGAAGACAT+TGG | + | chr3.1:58752126-58752145 | MS.gene87665:CDS | 35.0% | |
TAGAATATCATACACACGTC+TGG | - | chr3.1:58756163-58756182 | None:intergenic | 35.0% | |
TAGTCATTTCAGAGAAAGTG+GGG | - | chr3.1:58755470-58755489 | None:intergenic | 35.0% | |
TCAGATGGAACTCTAATAGA+GGG | + | chr3.1:58752113-58752132 | MS.gene87665:CDS | 35.0% | |
TGAATGAGATAACTCTCATG+TGG | + | chr3.1:58752254-58752273 | MS.gene87665:intron | 35.0% | |
TGACCCTTAATCGTTATTGT+TGG | + | chr3.1:58752014-58752033 | MS.gene87665:intron | 35.0% | |
TGATAAAAGAAGAGAAGGGA+GGG | + | chr3.1:58752828-58752847 | MS.gene87665:intron | 35.0% | |
TGCTAGACATGTAAGAATCT+AGG | + | chr3.1:58756243-58756262 | MS.gene87665:intron | 35.0% | |
TGTGAGGAAACATTTGCAAA+TGG | - | chr3.1:58754320-58754339 | None:intergenic | 35.0% | |
TGTTCAACTGAAGAGAAAGT+TGG | - | chr3.1:58755159-58755178 | None:intergenic | 35.0% | |
TTATGATGTTGCAGCTTCTT+TGG | + | chr3.1:58753001-58753020 | MS.gene87665:intron | 35.0% | |
TTGATAAAAGAAGAGAAGGG+AGG | + | chr3.1:58752827-58752846 | MS.gene87665:intron | 35.0% | |
TTGCCGTTAAAAAAAGGTCA+TGG | - | chr3.1:58756107-58756126 | None:intergenic | 35.0% | |
TTGTGCTAGTATCATTTGTG+GGG | + | chr3.1:58751834-58751853 | MS.gene87665:intron | 35.0% | |
TTTCTGTCGTATGTATGTGA+GGG | + | chr3.1:58751047-58751066 | MS.gene87665:intron | 35.0% | |
! | AAGGTACATTTTCACTGGTA+CGG | - | chr3.1:58756369-58756388 | None:intergenic | 35.0% |
! | AATAAGGCTGGAATTAGCTT+AGG | - | chr3.1:58755518-58755537 | None:intergenic | 35.0% |
! | AGTGTTAAAGCTACTTGTTG+AGG | + | chr3.1:58755764-58755783 | MS.gene87665:CDS | 35.0% |
! | ATAGGGTATTTGGATCAGTT+TGG | + | chr3.1:58755615-58755634 | MS.gene87665:CDS | 35.0% |
! | ATATGGTTTTCAGATCCTGT+TGG | + | chr3.1:58756676-58756695 | MS.gene87665:intron | 35.0% |
! | GGCATTTTGTTGAAAAGACA+AGG | - | chr3.1:58752941-58752960 | None:intergenic | 35.0% |
! | GTTGGTGAAATGTTAGACAA+TGG | - | chr3.1:58754203-58754222 | None:intergenic | 35.0% |
! | TAGGGTATTTGGATCAGTTT+GGG | + | chr3.1:58755616-58755635 | MS.gene87665:CDS | 35.0% |
! | TCCCATGATTTTCCATCATT+TGG | - | chr3.1:58756415-58756434 | None:intergenic | 35.0% |
! | TGTGTGCATTTTCCAAATGA+TGG | + | chr3.1:58756400-58756419 | MS.gene87665:intron | 35.0% |
! | TTAAAGCTACTTGTTGAGGA+GGG | + | chr3.1:58755768-58755787 | MS.gene87665:CDS | 35.0% |
! | TTCCATCTGATTTTATGGCA+GGG | - | chr3.1:58752103-58752122 | None:intergenic | 35.0% |
! | TTGTGTGTATGACAGTTTTC+AGG | + | chr3.1:58751360-58751379 | MS.gene87665:intron | 35.0% |
! | TTTTTAACGGCAAATATGCC+GGG | + | chr3.1:58756114-58756133 | MS.gene87665:intron | 35.0% |
!! | ATGGTTTTCTGGGGAAAATA+AGG | + | chr3.1:58755858-58755877 | MS.gene87665:intron | 35.0% |
!! | TGGTTTTCTGGGGAAAATAA+GGG | + | chr3.1:58755859-58755878 | MS.gene87665:intron | 35.0% |
!! | TTTTCTGAAGATGATGTTGG+TGG | - | chr3.1:58754290-58754309 | None:intergenic | 35.0% |
!!! | CAAACTGCTACTTTTCCTAA+TGG | + | chr3.1:58753062-58753081 | MS.gene87665:CDS | 35.0% |
!!! | TCCAGGCATATTTTAGCAAT+AGG | - | chr3.1:58755811-58755830 | None:intergenic | 35.0% |
!!! | TCTCCTGACTGGTTTTATTT+TGG | + | chr3.1:58755713-58755732 | MS.gene87665:intron | 35.0% |
!!! | TTTTCAGATCCTGTTGGTTT+TGG | + | chr3.1:58756682-58756701 | MS.gene87665:intron | 35.0% |
AAACATTGCCAGCAAACTTG+AGG | - | chr3.1:58751506-58751525 | None:intergenic | 40.0% | |
AATCACCTTAACGGGAATTC+CGG | - | chr3.1:58755649-58755668 | None:intergenic | 40.0% | |
ACATGGGATATAGTGCCTAT+GGG | - | chr3.1:58752049-58752068 | None:intergenic | 40.0% | |
ACATGTGCAGCTAAATCCAA+TGG | - | chr3.1:58754722-58754741 | None:intergenic | 40.0% | |
ACCTATTCCAAGCAAACCTA+TGG | + | chr3.1:58754232-58754251 | MS.gene87665:CDS | 40.0% | |
ACGTCCATGCAATTAGCAAT+AGG | - | chr3.1:58751965-58751984 | None:intergenic | 40.0% | |
AGACACCAAATCACCTTAAC+GGG | - | chr3.1:58755657-58755676 | None:intergenic | 40.0% | |
AGAGAGAGAGTTAGCGAAAT+CGG | - | chr3.1:58754463-58754482 | None:intergenic | 40.0% | |
AGATTATCTTCGATGTGAGG+GGG | - | chr3.1:58756339-58756358 | None:intergenic | 40.0% | |
AGGGTGATGTAATCAGAGAA+GGG | + | chr3.1:58755586-58755605 | MS.gene87665:intron | 40.0% | |
AGTCCAATCACTTGGTTAGT+AGG | + | chr3.1:58752511-58752530 | MS.gene87665:intron | 40.0% | |
AGTCCCTATTGCTAATTGCA+TGG | + | chr3.1:58751958-58751977 | MS.gene87665:intron | 40.0% | |
ATAAAACCCACCATCAGACT+TGG | - | chr3.1:58752188-58752207 | None:intergenic | 40.0% | |
ATTACCTCTTTACAGATGGG+AGG | - | chr3.1:58754585-58754604 | None:intergenic | 40.0% | |
CAATATCACTGTCTGTACTG+TGG | + | chr3.1:58755385-58755404 | MS.gene87665:intron | 40.0% | |
CAATGATGAGATTGTTAGGC+TGG | + | chr3.1:58751295-58751314 | MS.gene87665:intron | 40.0% | |
CAGACACCAAATCACCTTAA+CGG | - | chr3.1:58755658-58755677 | None:intergenic | 40.0% | |
CATGTTAACAAGGTCCTATC+AGG | - | chr3.1:58754898-58754917 | None:intergenic | 40.0% | |
CGAAGAGGTAGAACAGTTAA+AGG | + | chr3.1:58754549-58754568 | MS.gene87665:CDS | 40.0% | |
CGTCCATGCAATTAGCAATA+GGG | - | chr3.1:58751964-58751983 | None:intergenic | 40.0% | |
GAATTCCCGTTAAGGTGATT+TGG | + | chr3.1:58755649-58755668 | MS.gene87665:intron | 40.0% | |
GATAAACGCCTACTTATGTC+TGG | + | chr3.1:58753302-58753321 | MS.gene87665:intron | 40.0% | |
GGAAAAGTAGCAGTTTGCAA+TGG | - | chr3.1:58753059-58753078 | None:intergenic | 40.0% | |
GGAAACATTTGCAAATGGGT+TGG | - | chr3.1:58754315-58754334 | None:intergenic | 40.0% | |
GGGAGAAACAAACATCTTTG+TGG | - | chr3.1:58751609-58751628 | None:intergenic | 40.0% | |
GGTGTGATATCCTCTTTGTT+TGG | - | chr3.1:58756318-58756337 | None:intergenic | 40.0% | |
GTAGATACAAAGAGAGAGAG+AGG | - | chr3.1:58750947-58750966 | None:intergenic | 40.0% | |
GTGGTTAATGAGTTTCCCTT+AGG | - | chr3.1:58752488-58752507 | None:intergenic | 40.0% | |
GTTTCTGTCGTATGTATGTG+AGG | + | chr3.1:58751046-58751065 | MS.gene87665:intron | 40.0% | |
TACTATGACCACAGAAAGCA+TGG | + | chr3.1:58755133-58755152 | MS.gene87665:intron | 40.0% | |
TAGGGTGATGTAATCAGAGA+AGG | + | chr3.1:58755585-58755604 | MS.gene87665:intron | 40.0% | |
TCTTTGTGCTTGTGAGAGAA+GGG | + | chr3.1:58752857-58752876 | MS.gene87665:intron | 40.0% | |
TGCAATAGTGCAAACGTGAT+AGG | + | chr3.1:58754825-58754844 | MS.gene87665:intron | 40.0% | |
TTCCCTGCCATAAAATCAGA+TGG | + | chr3.1:58752098-58752117 | MS.gene87665:CDS | 40.0% | |
TTCTAACACCTCAAGTTTGC+TGG | + | chr3.1:58751495-58751514 | MS.gene87665:intron | 40.0% | |
! | AGGGTATTTGGATCAGTTTG+GGG | + | chr3.1:58755617-58755636 | MS.gene87665:CDS | 40.0% |
! | ATAGGTTTGCTTGGAATAGG+TGG | - | chr3.1:58754233-58754252 | None:intergenic | 40.0% |
! | ATTTGGATCAGTTTGGGGTT+GGG | + | chr3.1:58755622-58755641 | MS.gene87665:CDS | 40.0% |
! | CATGCAAGGTACATTTTCAC+TGG | - | chr3.1:58756374-58756393 | None:intergenic | 40.0% |
! | GATTCATCCATAGGTTTGCT+TGG | - | chr3.1:58754242-58754261 | None:intergenic | 40.0% |
! | GGAAATTTTGCAGTCAGATG+TGG | + | chr3.1:58755734-58755753 | MS.gene87665:intron | 40.0% |
! | GGCTAGCTAAGAGATGAAAA+AGG | - | chr3.1:58751631-58751650 | None:intergenic | 40.0% |
! | GTTAAAGCTACTTGTTGAGG+AGG | + | chr3.1:58755767-58755786 | MS.gene87665:CDS | 40.0% |
! | GTTCCATCTGATTTTATGGC+AGG | - | chr3.1:58752104-58752123 | None:intergenic | 40.0% |
! | TATTTGGATCAGTTTGGGGT+TGG | + | chr3.1:58755621-58755640 | MS.gene87665:CDS | 40.0% |
! | TCCATAGGTTTGCTTGGAAT+AGG | - | chr3.1:58754236-58754255 | None:intergenic | 40.0% |
! | TGCACACAAAAAAGCATGCA+AGG | - | chr3.1:58756388-58756407 | None:intergenic | 40.0% |
! | TTAATAGCATTGGAGGCTTC+TGG | + | chr3.1:58754353-58754372 | MS.gene87665:CDS | 40.0% |
!! | AGAAAGTGACGGATACCAAA+CGG | + | chr3.1:58753869-58753888 | MS.gene87665:intron | 40.0% |
!! | TGTCTGGTTTGCTTATGATC+AGG | + | chr3.1:58753318-58753337 | MS.gene87665:intron | 40.0% |
!! | TGTGTATGACAGTTTTCAGG+TGG | + | chr3.1:58751363-58751382 | MS.gene87665:intron | 40.0% |
AAAGTTGGCCATGCTTTCTG+TGG | - | chr3.1:58755144-58755163 | None:intergenic | 45.0% | |
AACCTATGGATGAATCAGCG+CGG | + | chr3.1:58754246-58754265 | MS.gene87665:CDS | 45.0% | |
AAGCAAGAATGCCAGCACAT+AGG | - | chr3.1:58754862-58754881 | None:intergenic | 45.0% | |
ACCAAGTGATTGGACTCAAG+TGG | - | chr3.1:58752507-58752526 | None:intergenic | 45.0% | |
ACCACTTGAGTCCAATCACT+TGG | + | chr3.1:58752503-58752522 | MS.gene87665:intron | 45.0% | |
ACGACAGCATCCACAAACTT+TGG | - | chr3.1:58751257-58751276 | None:intergenic | 45.0% | |
AGAAACCCGAGTTTGATTCC+TGG | - | chr3.1:58752451-58752470 | None:intergenic | 45.0% | |
AGAGAAGGGCCTTAGGAAAA+GGG | + | chr3.1:58752871-58752890 | MS.gene87665:intron | 45.0% | |
AGGTGATCTTCTCCTCTCTT+TGG | + | chr3.1:58753392-58753411 | MS.gene87665:intron | 45.0% | |
AGTGAAAGGATCGAATGGCA+GGG | - | chr3.1:58750911-58750930 | None:intergenic | 45.0% | |
AGTTTGTGGATGCTGTCGTA+AGG | + | chr3.1:58751258-58751277 | MS.gene87665:intron | 45.0% | |
ATCAACACAGCCAAGTCTGA+TGG | + | chr3.1:58752175-58752194 | MS.gene87665:CDS | 45.0% | |
ATGGGATCTCCAAAACCAAC+AGG | - | chr3.1:58756694-58756713 | None:intergenic | 45.0% | |
CACATGGGATATAGTGCCTA+TGG | - | chr3.1:58752050-58752069 | None:intergenic | 45.0% | |
CACTGTCTGTACTGTGGTAA+TGG | + | chr3.1:58755391-58755410 | MS.gene87665:intron | 45.0% | |
CGCGTTAGTATCTTCTCCTA+CGG | + | chr3.1:58754388-58754407 | MS.gene87665:CDS | 45.0% | |
CTGTCATACACACAAAGGAG+AGG | - | chr3.1:58751355-58751374 | None:intergenic | 45.0% | |
GATATAGTGCCTATGGGATC+TGG | - | chr3.1:58752043-58752062 | None:intergenic | 45.0% | |
GTCATGGAATGATGGCAAGA+CGG | - | chr3.1:58756722-58756741 | None:intergenic | 45.0% | |
GTCTTTGTGCTTGTGAGAGA+AGG | + | chr3.1:58752856-58752875 | MS.gene87665:intron | 45.0% | |
TCCTGAACGATTCGTCCTAA+GGG | + | chr3.1:58752470-58752489 | MS.gene87665:intron | 45.0% | |
TGATGTAATCAGAGAAGGGC+AGG | + | chr3.1:58755590-58755609 | MS.gene87665:CDS | 45.0% | |
TGTGCAGCTAAATCCAATGG+CGG | - | chr3.1:58754719-58754738 | None:intergenic | 45.0% | |
TGTTAACCCTCCAGTTCCTT+GGG | + | chr3.1:58752358-58752377 | MS.gene87665:intron | 45.0% | |
TGTTGGATTCCAGATCCCAT+AGG | + | chr3.1:58752031-58752050 | MS.gene87665:intron | 45.0% | |
TTAGGAAAAGGGCAACGGAT+GGG | + | chr3.1:58752882-58752901 | MS.gene87665:intron | 45.0% | |
TTCCCACCAGGAATCAAACT+CGG | + | chr3.1:58752442-58752461 | MS.gene87665:intron | 45.0% | |
TTCCTGGTGGGAACAATTCT+TGG | - | chr3.1:58752435-58752454 | None:intergenic | 45.0% | |
TTTACCTAACTTCGAACCCG+AGG | + | chr3.1:58751329-58751348 | MS.gene87665:intron | 45.0% | |
! | ATTTTGCAGTCAGATGTGGC+TGG | + | chr3.1:58755738-58755757 | MS.gene87665:intron | 45.0% |
! | GTTTAGAAGAGTGCGTCTCA+AGG | - | chr3.1:58751703-58751722 | None:intergenic | 45.0% |
! | TGAAAGTGCAACCTATGTGC+TGG | + | chr3.1:58754848-58754867 | MS.gene87665:intron | 45.0% |
! | TTTGGATCAGTTTGGGGTTG+GGG | + | chr3.1:58755623-58755642 | MS.gene87665:CDS | 45.0% |
!! | GAAAGTGACGGATACCAAAC+GGG | + | chr3.1:58753870-58753889 | MS.gene87665:intron | 45.0% |
!! | GAAGATGATGTTGGTGGCAA+TGG | - | chr3.1:58754284-58754303 | None:intergenic | 45.0% |
!!! | AATTATCATTAAAATTTTAT+AGG | - | chr3.1:58753515-58753534 | None:intergenic | 5.0% |
!!! | ATTATCATTAAAATTTTATA+GGG | - | chr3.1:58753514-58753533 | None:intergenic | 5.0% |
!!! | ATTATTTTTTTAATATTTCA+TGG | + | chr3.1:58751577-58751596 | MS.gene87665:intron | 5.0% |
AACACAGCCAAGTCTGATGG+TGG | + | chr3.1:58752178-58752197 | MS.gene87665:intron | 50.0% | |
AACCCGAGTTTGATTCCTGG+TGG | - | chr3.1:58752448-58752467 | None:intergenic | 50.0% | |
AACTACAGCTGCCCTCTCAA+TGG | - | chr3.1:58752080-58752099 | None:intergenic | 50.0% | |
ACACAGCCAAGTCTGATGGT+GGG | + | chr3.1:58752179-58752198 | MS.gene87665:intron | 50.0% | |
ACCCGAGTTTGATTCCTGGT+GGG | - | chr3.1:58752447-58752466 | None:intergenic | 50.0% | |
ACCTATGGATGAATCAGCGC+GGG | + | chr3.1:58754247-58754266 | MS.gene87665:CDS | 50.0% | |
ATCAGAGAAGGGCAGGTGAT+AGG | + | chr3.1:58755597-58755616 | MS.gene87665:CDS | 50.0% | |
ATGAGGACAAGCCAGATGGA+GGG | - | chr3.1:58754691-58754710 | None:intergenic | 50.0% | |
ATGTGCGATCCTCCATTGAG+AGG | + | chr3.1:58752065-58752084 | MS.gene87665:CDS | 50.0% | |
CAGATGACTTCATGCAACGC+AGG | + | chr3.1:58756036-58756055 | MS.gene87665:intron | 50.0% | |
CAGTGAAAGGATCGAATGGC+AGG | - | chr3.1:58750912-58750931 | None:intergenic | 50.0% | |
CTAGTAATCCGAAGTTCGGC+CGG | + | chr3.1:58752391-58752410 | MS.gene87665:intron | 50.0% | |
CTCAATGGAGGATCGCACAT+GGG | - | chr3.1:58752065-58752084 | None:intergenic | 50.0% | |
CTCCTGAACGATTCGTCCTA+AGG | + | chr3.1:58752469-58752488 | MS.gene87665:intron | 50.0% | |
CTCTCTCTCACTCTCTAGGT+TGG | + | chr3.1:58754519-58754538 | MS.gene87665:intron | 50.0% | |
CTCTCTCTCTCTCACTCTCT+AGG | + | chr3.1:58754515-58754534 | MS.gene87665:intron | 50.0% | |
CTTAGGAAAAGGGCAACGGA+TGG | + | chr3.1:58752881-58752900 | MS.gene87665:intron | 50.0% | |
GAGAGAAGGGCCTTAGGAAA+AGG | + | chr3.1:58752870-58752889 | MS.gene87665:intron | 50.0% | |
GAGAGAGTTAGCGAAATCGG+AGG | - | chr3.1:58754460-58754479 | None:intergenic | 50.0% | |
GATGGCAAGACGGCAAGAAT+GGG | - | chr3.1:58756712-58756731 | None:intergenic | 50.0% | |
GCATCCTCCCATCTGTAAAG+AGG | + | chr3.1:58754578-58754597 | MS.gene87665:CDS | 50.0% | |
GGCCCTAGTAATCCGAAGTT+CGG | + | chr3.1:58752387-58752406 | MS.gene87665:intron | 50.0% | |
GGCCGAACTTCGGATTACTA+GGG | - | chr3.1:58752392-58752411 | None:intergenic | 50.0% | |
GGTCCTATCAGGAGACTAAG+CGG | - | chr3.1:58754887-58754906 | None:intergenic | 50.0% | |
GTGAAAGGATCGAATGGCAG+GGG | - | chr3.1:58750910-58750929 | None:intergenic | 50.0% | |
GTGTTAACCCTCCAGTTCCT+TGG | + | chr3.1:58752357-58752376 | MS.gene87665:intron | 50.0% | |
GTTAACCCTCCAGTTCCTTG+GGG | + | chr3.1:58752359-58752378 | MS.gene87665:intron | 50.0% | |
GTTCATGAGGACAAGCCAGA+TGG | - | chr3.1:58754695-58754714 | None:intergenic | 50.0% | |
TACACACAAAGGAGAGGCCT+CGG | - | chr3.1:58751349-58751368 | None:intergenic | 50.0% | |
TAGTAATCCGAAGTTCGGCC+GGG | + | chr3.1:58752392-58752411 | MS.gene87665:intron | 50.0% | |
TCAGAGAAGGGCAGGTGATA+GGG | + | chr3.1:58755598-58755617 | MS.gene87665:CDS | 50.0% | |
TCCCACCAGGAATCAAACTC+GGG | + | chr3.1:58752443-58752462 | MS.gene87665:intron | 50.0% | |
TCCCTTAGGACGAATCGTTC+AGG | - | chr3.1:58752474-58752493 | None:intergenic | 50.0% | |
TCTCAATGGAGGATCGCACA+TGG | - | chr3.1:58752066-58752085 | None:intergenic | 50.0% | |
TGATGGCAAGACGGCAAGAA+TGG | - | chr3.1:58756713-58756732 | None:intergenic | 50.0% | |
TGTCCGCTTAGTCTCCTGAT+AGG | + | chr3.1:58754881-58754900 | MS.gene87665:intron | 50.0% | |
TGTGCGATCCTCCATTGAGA+GGG | + | chr3.1:58752066-58752085 | MS.gene87665:CDS | 50.0% | |
! | AAGCTACTTGTTGAGGAGGG+AGG | + | chr3.1:58755771-58755790 | MS.gene87665:CDS | 50.0% |
! | AGGGCAGGTGATAGGGTATT+TGG | + | chr3.1:58755605-58755624 | MS.gene87665:CDS | 50.0% |
! | ATCCAATGGCGGAGTTCATG+AGG | - | chr3.1:58754708-58754727 | None:intergenic | 50.0% |
! | CATCCGTTGCCCTTTTCCTA+AGG | - | chr3.1:58752883-58752902 | None:intergenic | 50.0% |
! | GGAATAGGTGGTGGTGTAGT+TGG | - | chr3.1:58754221-58754240 | None:intergenic | 50.0% |
! | GGTTTGCTTGGAATAGGTGG+TGG | - | chr3.1:58754230-58754249 | None:intergenic | 50.0% |
! | TAGGTTGGCTCATTCCGAAG+AGG | + | chr3.1:58754534-58754553 | MS.gene87665:intron | 50.0% |
AAAGGATCGAATGGCAGGGG+AGG | - | chr3.1:58750907-58750926 | None:intergenic | 55.0% | |
ACACACAAAGGAGAGGCCTC+GGG | - | chr3.1:58751348-58751367 | None:intergenic | 55.0% | |
ACACACGTCTGGGCAAATGC+TGG | - | chr3.1:58756152-58756171 | None:intergenic | 55.0% | |
ACAGCTCTGCAGTTCTCCCA+GGG | - | chr3.1:58752912-58752931 | None:intergenic | 55.0% | |
CACTGAATGCTCCCTCCATC+TGG | + | chr3.1:58754677-58754696 | MS.gene87665:intron | 55.0% | |
CATGAGGACAAGCCAGATGG+AGG | - | chr3.1:58754692-58754711 | None:intergenic | 55.0% | |
CCTCCAGTTCCTTGGGGAAA+GGG | + | chr3.1:58752365-58752384 | MS.gene87665:intron | 55.0% | |
CCTTTCCCCAAGGAACTGGA+GGG | - | chr3.1:58752367-58752386 | None:intergenic | 55.0% | |
CGGCCGAACTTCGGATTACT+AGG | - | chr3.1:58752393-58752412 | None:intergenic | 55.0% | |
CTCCAGTTCCTTGGGGAAAG+GGG | + | chr3.1:58752366-58752385 | MS.gene87665:intron | 55.0% | |
GATGCTTCTTCCGGTTCTGC+TGG | + | chr3.1:58751219-58751238 | MS.gene87665:intron | 55.0% | |
GCCAGGCTTTACTTACCTCC+CGG | - | chr3.1:58752413-58752432 | None:intergenic | 55.0% | |
GCTTGTGAGAGAAGGGCCTT+AGG | + | chr3.1:58752864-58752883 | MS.gene87665:intron | 55.0% | |
GGCCAAGAATTGTTCCCACC+AGG | + | chr3.1:58752430-58752449 | MS.gene87665:intron | 55.0% | |
GGGCCTTAGGAAAAGGGCAA+CGG | + | chr3.1:58752877-58752896 | MS.gene87665:intron | 55.0% | |
GGTGGGAACAATTCTTGGCC+AGG | - | chr3.1:58752430-58752449 | None:intergenic | 55.0% | |
GTCCTCATGAACTCCGCCAT+TGG | + | chr3.1:58754703-58754722 | MS.gene87665:intron | 55.0% | |
TACAGCTCTGCAGTTCTCCC+AGG | - | chr3.1:58752913-58752932 | None:intergenic | 55.0% | |
TACAGCTGCCCTCTCAATGG+AGG | - | chr3.1:58752077-58752096 | None:intergenic | 55.0% | |
TGCTGGAGGACTAAACGACC+CGG | - | chr3.1:58756135-58756154 | None:intergenic | 55.0% | |
!! | TCCCGCGCTGATTCATCCAT+AGG | - | chr3.1:58754251-58754270 | None:intergenic | 55.0% |
!! | TGTTGGTGGCAATGGCTGTG+CGG | - | chr3.1:58754276-58754295 | None:intergenic | 55.0% |
CACGTCTGGGCAAATGCTGG+AGG | - | chr3.1:58756149-58756168 | None:intergenic | 60.0% | |
CCCTCCAGTTCCTTGGGGAA+AGG | + | chr3.1:58752364-58752383 | MS.gene87665:intron | 60.0% | |
CCCTTTCCCCAAGGAACTGG+AGG | - | chr3.1:58752368-58752387 | None:intergenic | 60.0% | |
CTTACCTCCCGGCCGAACTT+CGG | - | chr3.1:58752402-58752421 | None:intergenic | 60.0% | |
GAGGCCTCGGGTTCGAAGTT+AGG | - | chr3.1:58751336-58751355 | None:intergenic | 60.0% | |
GCAACGGATGGGTAGACCCT+GGG | + | chr3.1:58752893-58752912 | MS.gene87665:intron | 60.0% | |
GCCGGGAGGTAAGTAAAGCC+TGG | + | chr3.1:58752409-58752428 | MS.gene87665:intron | 60.0% | |
TAATCCGAAGTTCGGCCGGG+AGG | + | chr3.1:58752395-58752414 | MS.gene87665:intron | 60.0% | |
TACTAGGGCCCCTTTCCCCA+AGG | - | chr3.1:58752377-58752396 | None:intergenic | 60.0% | |
TGGGGCCGGAATTCCCGTTA+AGG | + | chr3.1:58755641-58755660 | MS.gene87665:CDS | 60.0% | |
! | CAGTGCACGGAAAGAGCGCA+CGG | - | chr3.1:58756271-58756290 | None:intergenic | 60.0% |
! | GATCAGTTTGGGGTTGGGGC+CGG | + | chr3.1:58755627-58755646 | MS.gene87665:CDS | 60.0% |
GGCAACGGATGGGTAGACCC+TGG | + | chr3.1:58752892-58752911 | MS.gene87665:intron | 65.0% | |
GGCCCCTTTCCCCAAGGAAC+TGG | - | chr3.1:58752371-58752390 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 58750897 | 58756750 | 58750897 | ID=MS.gene87665 |
chr3.1 | mRNA | 58750897 | 58756750 | 58750897 | ID=MS.gene87665.t1;Parent=MS.gene87665 |
chr3.1 | exon | 58750897 | 58750930 | 58750897 | ID=MS.gene87665.t1.exon1;Parent=MS.gene87665.t1 |
chr3.1 | CDS | 58750897 | 58750930 | 58750897 | ID=cds.MS.gene87665.t1;Parent=MS.gene87665.t1 |
chr3.1 | exon | 58752044 | 58752196 | 58752044 | ID=MS.gene87665.t1.exon2;Parent=MS.gene87665.t1 |
chr3.1 | CDS | 58752044 | 58752196 | 58752044 | ID=cds.MS.gene87665.t1;Parent=MS.gene87665.t1 |
chr3.1 | exon | 58753015 | 58753091 | 58753015 | ID=MS.gene87665.t1.exon3;Parent=MS.gene87665.t1 |
chr3.1 | CDS | 58753015 | 58753091 | 58753015 | ID=cds.MS.gene87665.t1;Parent=MS.gene87665.t1 |
chr3.1 | exon | 58753340 | 58753393 | 58753340 | ID=MS.gene87665.t1.exon4;Parent=MS.gene87665.t1 |
chr3.1 | CDS | 58753340 | 58753393 | 58753340 | ID=cds.MS.gene87665.t1;Parent=MS.gene87665.t1 |
chr3.1 | exon | 58754149 | 58754409 | 58754149 | ID=MS.gene87665.t1.exon5;Parent=MS.gene87665.t1 |
chr3.1 | CDS | 58754149 | 58754409 | 58754149 | ID=cds.MS.gene87665.t1;Parent=MS.gene87665.t1 |
chr3.1 | exon | 58754537 | 58754599 | 58754537 | ID=MS.gene87665.t1.exon6;Parent=MS.gene87665.t1 |
chr3.1 | CDS | 58754537 | 58754599 | 58754537 | ID=cds.MS.gene87665.t1;Parent=MS.gene87665.t1 |
chr3.1 | exon | 58755588 | 58755662 | 58755588 | ID=MS.gene87665.t1.exon7;Parent=MS.gene87665.t1 |
chr3.1 | CDS | 58755588 | 58755662 | 58755588 | ID=cds.MS.gene87665.t1;Parent=MS.gene87665.t1 |
chr3.1 | exon | 58755747 | 58755792 | 58755747 | ID=MS.gene87665.t1.exon8;Parent=MS.gene87665.t1 |
chr3.1 | CDS | 58755747 | 58755792 | 58755747 | ID=cds.MS.gene87665.t1;Parent=MS.gene87665.t1 |
chr3.1 | exon | 58756689 | 58756750 | 58756689 | ID=MS.gene87665.t1.exon9;Parent=MS.gene87665.t1 |
chr3.1 | CDS | 58756689 | 58756750 | 58756689 | ID=cds.MS.gene87665.t1;Parent=MS.gene87665.t1 |
Gene Sequence |
Protein sequence |