Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88048.t1 | RHN59492.1 | 96.4 | 335 | 12 | 0 | 1 | 335 | 1 | 335 | 2.70E-171 | 611.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88048.t1 | C0ZIY1 | 58.6 | 290 | 119 | 1 | 43 | 332 | 10 | 298 | 2.3e-86 | 320.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88048.t1 | A0A396I1J0 | 96.4 | 335 | 12 | 0 | 1 | 335 | 1 | 335 | 2.0e-171 | 611.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053883 | MS.gene88048 | 0.807633 | 4.59E-50 | -1.69E-46 |
| MS.gene057414 | MS.gene88048 | 0.8115 | 6.79E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88048.t1 | MTR_4g031220 | 95.238 | 231 | 11 | 0 | 1 | 231 | 1 | 231 | 4.73e-160 | 447 |
| MS.gene88048.t1 | MTR_4g031220 | 91.954 | 174 | 14 | 0 | 1 | 174 | 1 | 174 | 1.83e-109 | 318 |
| MS.gene88048.t1 | MTR_4g031220 | 93.491 | 169 | 11 | 0 | 1 | 169 | 1 | 169 | 2.43e-109 | 316 |
| MS.gene88048.t1 | MTR_4g031220 | 95.833 | 144 | 6 | 0 | 26 | 169 | 4 | 147 | 3.71e-93 | 274 |
| MS.gene88048.t1 | MTR_4g031235 | 99.038 | 104 | 1 | 0 | 232 | 335 | 56 | 159 | 3.98e-65 | 203 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88048.t1 | AT1G50510 | 69.231 | 338 | 94 | 2 | 1 | 337 | 1 | 329 | 4.42e-164 | 461 |
Find 79 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAAGAATAATGCCCTTAT+TGG | 0.153218 | 4.3:+69423915 | MS.gene88048:CDS |
| GAAGAGTGTGCTTCCTTAAT+AGG | 0.266235 | 4.3:+69423226 | MS.gene88048:CDS |
| TCTTTGTGACTGGTGGGATT+GGG | 0.283480 | 4.3:+69421395 | MS.gene88048:CDS |
| ATTAAGGAAGCACACTCTTC+AGG | 0.285757 | 4.3:-69423223 | None:intergenic |
| TCCCCGGACCCTTGAATATC+TGG | 0.290042 | 4.3:+69422085 | MS.gene88048:CDS |
| GTCTTTGTGACTGGTGGGAT+TGG | 0.292587 | 4.3:+69421394 | MS.gene88048:CDS |
| CCTCAAGAACAGTCGGCTTC+TGG | 0.307982 | 4.3:+69423415 | MS.gene88048:CDS |
| TGGCATCTTCAGCAGCTTTA+CGG | 0.315615 | 4.3:+69419317 | MS.gene88048:CDS |
| CAGCAACTTTAGCTCCAATA+AGG | 0.319503 | 4.3:-69423929 | None:intergenic |
| ACTTGAAAGGTTGGCTACTT+TGG | 0.347060 | 4.3:+69420281 | MS.gene88048:CDS |
| CTTGAAAGGTTGGCTACTTT+GGG | 0.352917 | 4.3:+69420282 | MS.gene88048:CDS |
| TCTAAAATTGCAATAGTTGC+AGG | 0.353501 | 4.3:-69419824 | None:intergenic |
| TGTAGGGAAAAGAATATATC+AGG | 0.370408 | 4.3:+69423641 | MS.gene88048:intron |
| AATGTTTCCCTTGCCTATTA+AGG | 0.388116 | 4.3:-69423239 | None:intergenic |
| AAGTTCACCTTGCTTCTTCA+AGG | 0.391127 | 4.3:-69423468 | None:intergenic |
| TGCTGGTGTAAAGTCAATAT+TGG | 0.394779 | 4.3:+69422058 | MS.gene88048:CDS |
| TTAAGGAAGCACACTCTTCA+GGG | 0.424538 | 4.3:-69423222 | None:intergenic |
| ACATGGTAAATACCTATGAT+AGG | 0.425097 | 4.3:-69419854 | None:intergenic |
| GGTATTCACGTCTTTGTGAC+TGG | 0.425837 | 4.3:+69421385 | MS.gene88048:CDS |
| TTAGATGGCGGGCCTATCAT+AGG | 0.427064 | 4.3:+69419842 | MS.gene88048:CDS |
| AGCAACTTTAGCTCCAATAA+GGG | 0.432199 | 4.3:-69423928 | None:intergenic |
| ATACCAGATATTCAAGGGTC+CGG | 0.435126 | 4.3:-69422088 | None:intergenic |
| CTTTGTGACTGGTGGGATTG+GGG | 0.436690 | 4.3:+69421396 | MS.gene88048:CDS |
| GCCGACTGTTCTTGAGGAAT+AGG | 0.445716 | 4.3:-69423409 | None:intergenic |
| AAATTTGCAAACTGCGAAAG+AGG | 0.448124 | 4.3:+69419769 | MS.gene88048:CDS |
| TAATTTCCAGGTTCCATGTC+GGG | 0.450450 | 4.3:+69423192 | MS.gene88048:intron |
| TTTGTTTGAATAGGTTTAAG+TGG | 0.462326 | 4.3:+69420252 | MS.gene88048:intron |
| TAGGTGGCCAGAGGTGGAAA+TGG | 0.463347 | 4.3:+69421206 | MS.gene88048:intron |
| TACCAGATATTCAAGGGTCC+GGG | 0.464964 | 4.3:-69422087 | None:intergenic |
| TGGGCGTGCAGTTGTTGCTC+TGG | 0.465235 | 4.3:+69419619 | MS.gene88048:CDS |
| GTTTCTGAAGCGTTATCACT+TGG | 0.477839 | 4.3:+69419599 | MS.gene88048:CDS |
| TTGTTTGAATAGGTTTAAGT+GGG | 0.488420 | 4.3:+69420253 | MS.gene88048:intron |
| TCTTCGTCGACACTTTGATT+CGG | 0.490963 | 4.3:+69419348 | MS.gene88048:CDS |
| TCTTCAGATATCACCGAGCT+TGG | 0.494007 | 4.3:+69422011 | MS.gene88048:CDS |
| ATCAAGCTCAAGGTCGGAAG+TGG | 0.495003 | 4.3:+69423370 | MS.gene88048:CDS |
| TACTGGTGTTCTTCCAAGCT+CGG | 0.500557 | 4.3:-69422024 | None:intergenic |
| CCAGCACATATAACTGCTAC+TGG | 0.504204 | 4.3:-69422041 | None:intergenic |
| TTTACTCTATCAAGCAAGAA+AGG | 0.504931 | 4.3:-69423677 | None:intergenic |
| AGTAGCACCATTTCCACCTC+TGG | 0.507555 | 4.3:-69421213 | None:intergenic |
| CTTGCTCTGCTAAGAGAAAA+CGG | 0.507945 | 4.3:+69423957 | MS.gene88048:CDS |
| TAGAATACCATGTGAAATGA+TGG | 0.512409 | 4.3:-69419648 | None:intergenic |
| TGAAGCAAGTGAGGCACCTC+CGG | 0.513459 | 4.3:-69423708 | None:intergenic |
| TTCACGTCTTTGTGACTGGT+GGG | 0.520192 | 4.3:+69421389 | MS.gene88048:CDS |
| AGTTCACCTTGCTTCTTCAA+GGG | 0.521769 | 4.3:-69423467 | None:intergenic |
| CAAACTGCGAAAGAGGTTGA+AGG | 0.526352 | 4.3:+69419776 | MS.gene88048:CDS |
| TGGGGAAGAACTTGAAAGGT+TGG | 0.535988 | 4.3:+69420272 | MS.gene88048:CDS |
| CATACCGGAGTTAATGCTGC+TGG | 0.536092 | 4.3:+69419542 | MS.gene88048:CDS |
| GAAGGTATTGTGAGAGAGAA+TGG | 0.536788 | 4.3:+69419794 | MS.gene88048:CDS |
| CAATGTGAAGGTAGCTTCAG+AGG | 0.537312 | 4.3:+69419577 | MS.gene88048:CDS |
| CCAGTAGCAGTTATATGTGC+TGG | 0.538807 | 4.3:+69422041 | MS.gene88048:CDS |
| TCCTATTCCTCAAGAACAGT+CGG | 0.538907 | 4.3:+69423408 | MS.gene88048:CDS |
| CACAGCATCAAGTGGCTGCA+AGG | 0.547952 | 4.3:+69422252 | MS.gene88048:CDS |
| TTTCTGAAGCGTTATCACTT+GGG | 0.556780 | 4.3:+69419600 | MS.gene88048:CDS |
| AATTTCATACCAGATATTCA+AGG | 0.561418 | 4.3:-69422094 | None:intergenic |
| AGCTCAGAAAACAGCTCGAA+GGG | 0.563723 | 4.3:+69420311 | MS.gene88048:CDS |
| GGGTTTGATATGCAGCATAC+CGG | 0.568795 | 4.3:+69419527 | MS.gene88048:intron |
| TAAGTGGGGAAGAACTTGAA+AGG | 0.569541 | 4.3:+69420268 | MS.gene88048:CDS |
| CCAGAAGCCGACTGTTCTTG+AGG | 0.575935 | 4.3:-69423415 | None:intergenic |
| TTTGTGACTGGTGGGATTGG+GGG | 0.579336 | 4.3:+69421397 | MS.gene88048:CDS |
| AGTCAATATTGGATATTCCC+CGG | 0.591846 | 4.3:+69422069 | MS.gene88048:CDS |
| TGCTAAGAGAAAACGGACAA+AGG | 0.592059 | 4.3:+69423964 | MS.gene88048:CDS |
| ATTTCATACCAGATATTCAA+GGG | 0.593872 | 4.3:-69422093 | None:intergenic |
| TTAATTTCCAGGTTCCATGT+CGG | 0.597267 | 4.3:+69423191 | MS.gene88048:intron |
| AGAAGCAAACATCAAGCTCA+AGG | 0.603538 | 4.3:+69423360 | MS.gene88048:intron |
| ATTCACGTCTTTGTGACTGG+TGG | 0.607238 | 4.3:+69421388 | MS.gene88048:CDS |
| GCAAACATCAAGCTCAAGGT+CGG | 0.609934 | 4.3:+69423364 | MS.gene88048:CDS |
| GAGCTCAGAAAACAGCTCGA+AGG | 0.611591 | 4.3:+69420310 | MS.gene88048:CDS |
| ACCAGATATTCAAGGGTCCG+GGG | 0.618563 | 4.3:-69422086 | None:intergenic |
| AGCTTCGTCAATCAATGTGA+AGG | 0.626786 | 4.3:+69419565 | MS.gene88048:CDS |
| GAGGATACTTGAAGCAAGTG+AGG | 0.630119 | 4.3:-69423717 | None:intergenic |
| AGCTCCAGCAGCATTAACTC+CGG | 0.631641 | 4.3:-69419546 | None:intergenic |
| TTCGGCTGACACAGTCAACA+AGG | 0.640187 | 4.3:+69419366 | MS.gene88048:CDS |
| GATAGAGTAAATGCACTCAC+CGG | 0.642406 | 4.3:+69423689 | MS.gene88048:CDS |
| TATCTTGAATAGGAAACACA+AGG | 0.650157 | 4.3:+69422184 | MS.gene88048:intron |
| TGTTTGAATAGGTTTAAGTG+GGG | 0.654481 | 4.3:+69420254 | MS.gene88048:intron |
| TAAGGAAGCACACTCTTCAG+GGG | 0.659437 | 4.3:-69423221 | None:intergenic |
| TCAGGGGTATCTACCCGACA+TGG | 0.659564 | 4.3:-69423205 | None:intergenic |
| GAATCTACCATCATTTCACA+TGG | 0.666324 | 4.3:+69419641 | MS.gene88048:CDS |
| AGAGTAAATGCACTCACCGG+AGG | 0.692180 | 4.3:+69423692 | MS.gene88048:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATCTTAAACTTAATTAA+AGG | - | chr4.3:69421745-69421764 | None:intergenic | 10.0% |
| !!! | AGAAAAAACTTTTTTTTTTT+TGG | + | chr4.3:69422807-69422826 | MS.gene88048:intron | 10.0% |
| !!! | GAAAAAACTTTTTTTTTTTT+GGG | + | chr4.3:69422808-69422827 | MS.gene88048:intron | 10.0% |
| !! | AATAAATGTGAAAGTTATAT+AGG | + | chr4.3:69421773-69421792 | MS.gene88048:intron | 15.0% |
| !! | TTAATGGTAAAAATATAACA+TGG | - | chr4.3:69419874-69419893 | None:intergenic | 15.0% |
| !! | TTGTGCTTAAAATTAATTAA+TGG | - | chr4.3:69419890-69419909 | None:intergenic | 15.0% |
| !!! | AAATCATTTTATAATCAACA+GGG | - | chr4.3:69422879-69422898 | None:intergenic | 15.0% |
| !!! | ATATCATTTTCATTTTTCTT+TGG | + | chr4.3:69421973-69421992 | MS.gene88048:intron | 15.0% |
| !!! | TAAATCATTTTATAATCAAC+AGG | - | chr4.3:69422880-69422899 | None:intergenic | 15.0% |
| !!! | TATCATTTTCATTTTTCTTT+GGG | + | chr4.3:69421974-69421993 | MS.gene88048:intron | 15.0% |
| !! | AAATAATCATAAGTTCATTC+TGG | + | chr4.3:69420487-69420506 | MS.gene88048:intron | 20.0% |
| !! | AATACTACCATAATAATGAT+AGG | - | chr4.3:69423078-69423097 | None:intergenic | 20.0% |
| !! | AATATAGTTGAAATGGTTAT+AGG | + | chr4.3:69422532-69422551 | MS.gene88048:intron | 20.0% |
| !! | AATTTATACACAATGTAACA+TGG | + | chr4.3:69419506-69419525 | MS.gene88048:intron | 20.0% |
| !! | ACCAAATAATGTTTCTTTAT+AGG | - | chr4.3:69421722-69421741 | None:intergenic | 20.0% |
| !! | ACCTATAAAGAAACATTATT+TGG | + | chr4.3:69421718-69421737 | MS.gene88048:intron | 20.0% |
| !! | ACGGTATAAGATATTAAATT+TGG | + | chr4.3:69420732-69420751 | MS.gene88048:intron | 20.0% |
| !! | ACTAGGTAAAATATTCAATT+TGG | - | chr4.3:69423857-69423876 | None:intergenic | 20.0% |
| !! | ATAAAGTATGATTTCAATAC+TGG | + | chr4.3:69419981-69420000 | MS.gene88048:intron | 20.0% |
| !! | ATCTTAATGATAGAATCAAT+CGG | + | chr4.3:69421460-69421479 | MS.gene88048:intron | 20.0% |
| !! | ATTTATACACAATGTAACAT+GGG | + | chr4.3:69419507-69419526 | MS.gene88048:intron | 20.0% |
| !! | TAAAATATTCAATTTGGATG+TGG | - | chr4.3:69423851-69423870 | None:intergenic | 20.0% |
| !! | TGATTCTATCATTAAGATAT+AGG | - | chr4.3:69421458-69421477 | None:intergenic | 20.0% |
| !! | TTGCAAGATAAATAATGAAA+AGG | + | chr4.3:69421589-69421608 | MS.gene88048:intron | 20.0% |
| !!! | AAGTTGTTTTCAAATAAATG+TGG | - | chr4.3:69420377-69420396 | None:intergenic | 20.0% |
| !!! | AATCATTTTATAATCAACAG+GGG | - | chr4.3:69422878-69422897 | None:intergenic | 20.0% |
| !!! | AATTTAACATTTTCACTTGT+AGG | + | chr4.3:69423624-69423643 | MS.gene88048:intron | 20.0% |
| !!! | ATTAAGTTTAAGATATTCTC+TGG | + | chr4.3:69421748-69421767 | MS.gene88048:intron | 20.0% |
| !!! | ATTTAACATTTTCACTTGTA+GGG | + | chr4.3:69423625-69423644 | MS.gene88048:intron | 20.0% |
| !!! | TAAACTTTAAAATTTTCTGC+AGG | + | chr4.3:69421360-69421379 | MS.gene88048:intron | 20.0% |
| !!! | TAGTAATTTTTTATCGTAGT+TGG | + | chr4.3:69422621-69422640 | MS.gene88048:intron | 20.0% |
| ! | AAAATTAGAACGAATCACAT+AGG | - | chr4.3:69423328-69423347 | None:intergenic | 25.0% |
| ! | AACACACAATATAGTTGAAA+TGG | + | chr4.3:69422525-69422544 | MS.gene88048:intron | 25.0% |
| ! | AATTTCATACCAGATATTCA+AGG | - | chr4.3:69422097-69422116 | None:intergenic | 25.0% |
| ! | ATAATGTTTCTTTATAGGTG+TGG | - | chr4.3:69421717-69421736 | None:intergenic | 25.0% |
| ! | ATTTCATACCAGATATTCAA+GGG | - | chr4.3:69422096-69422115 | None:intergenic | 25.0% |
| ! | CAAAATACTAGTAATATTCC+TGG | - | chr4.3:69421940-69421959 | None:intergenic | 25.0% |
| ! | CATTAACAATGCTTATTAAC+TGG | + | chr4.3:69423534-69423553 | MS.gene88048:intron | 25.0% |
| ! | TCCTATTCAAGATAAAAACA+AGG | - | chr4.3:69422178-69422197 | None:intergenic | 25.0% |
| ! | TTAAGATATGCTTCAAAACT+AGG | - | chr4.3:69423874-69423893 | None:intergenic | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | + | chr4.3:69420831-69420850 | MS.gene88048:intron | 25.0% |
| ! | TTGTTGAAAAACTTCAAAAG+AGG | - | chr4.3:69423739-69423758 | None:intergenic | 25.0% |
| ! | TTGTTTGAATAGGTTTAAGT+GGG | + | chr4.3:69420253-69420272 | MS.gene88048:intron | 25.0% |
| ! | TTTAAAAAGAGGCAGATAAA+AGG | - | chr4.3:69422839-69422858 | None:intergenic | 25.0% |
| ! | TTTCAAATAAATGTGGTCTA+TGG | - | chr4.3:69420370-69420389 | None:intergenic | 25.0% |
| ! | TTTCTGTGTAAATGCAATAT+TGG | + | chr4.3:69421077-69421096 | MS.gene88048:intron | 25.0% |
| ! | TTTGCAACAAATAGTAATGA+TGG | - | chr4.3:69419417-69419436 | None:intergenic | 25.0% |
| ! | TTTGTTTGAATAGGTTTAAG+TGG | + | chr4.3:69420252-69420271 | MS.gene88048:intron | 25.0% |
| !! | AAAAATGTCTCTTTTGTGAA+AGG | - | chr4.3:69421640-69421659 | None:intergenic | 25.0% |
| !! | CACTACATTTTCATTGTATA+AGG | + | chr4.3:69420407-69420426 | MS.gene88048:intron | 25.0% |
| !! | CGTTCTAATTTTTATTCTTC+TGG | + | chr4.3:69423336-69423355 | MS.gene88048:intron | 25.0% |
| !! | GAAATGCATTTTTCACATAA+TGG | - | chr4.3:69422943-69422962 | None:intergenic | 25.0% |
| !! | GTTACTTTATGTATAAAGCA+AGG | - | chr4.3:69422313-69422332 | None:intergenic | 25.0% |
| !! | TAATTTTTATTGAGCTTTCC+AGG | + | chr4.3:69421919-69421938 | MS.gene88048:intron | 25.0% |
| !! | TTCCATTTTATATAGACGAA+GGG | - | chr4.3:69422429-69422448 | None:intergenic | 25.0% |
| !!! | AATCTATCTATGTTGCTTTT+AGG | + | chr4.3:69421187-69421206 | MS.gene88048:intron | 25.0% |
| !!! | GCTTTATTTTGGTAATAATC+AGG | - | chr4.3:69420434-69420453 | None:intergenic | 25.0% |
| !!! | GTATTTTAAGATTTAACGCA+CGG | + | chr4.3:69423093-69423112 | MS.gene88048:intron | 25.0% |
| !!! | TATTTTAAGATTTAACGCAC+GGG | + | chr4.3:69423094-69423113 | MS.gene88048:intron | 25.0% |
| !!! | TCCTTGTTTTTATCTTGAAT+AGG | + | chr4.3:69422174-69422193 | MS.gene88048:intron | 25.0% |
| !!! | TTAAATTTTGGTTTACCGAA+TGG | + | chr4.3:69422279-69422298 | MS.gene88048:intron | 25.0% |
| AAAACAATGGAGAGAGAAAA+AGG | + | chr4.3:69420844-69420863 | MS.gene88048:intron | 30.0% | |
| AAACCAAAATGACATGATAC+AGG | - | chr4.3:69421331-69421350 | None:intergenic | 30.0% | |
| AACCAAAATGACATGATACA+GGG | - | chr4.3:69421330-69421349 | None:intergenic | 30.0% | |
| AATAAGAAGTAAGACAAGCA+AGG | - | chr4.3:69420819-69420838 | None:intergenic | 30.0% | |
| AATCTGTATCAGTTTCATGT+TGG | - | chr4.3:69422691-69422710 | None:intergenic | 30.0% | |
| ACAAGAGCAATGTCTAAATA+TGG | - | chr4.3:69423897-69423916 | None:intergenic | 30.0% | |
| ACATGGTAAATACCTATGAT+AGG | - | chr4.3:69419857-69419876 | None:intergenic | 30.0% | |
| AGATGTTCTAGTCTAAATCT+TGG | + | chr4.3:69421520-69421539 | MS.gene88048:intron | 30.0% | |
| ATATAGGAACCAATATGTAG+TGG | + | chr4.3:69421789-69421808 | MS.gene88048:intron | 30.0% | |
| ATCAACTAAAATCCCATGAA+TGG | - | chr4.3:69422668-69422687 | None:intergenic | 30.0% | |
| ATGATGTACTGAAATGAGTT+TGG | + | chr4.3:69423142-69423161 | MS.gene88048:intron | 30.0% | |
| CAAAATAAAGCTCGTCAAAT+AGG | + | chr4.3:69420443-69420462 | MS.gene88048:intron | 30.0% | |
| CACAATGTATTTCAATTCAC+TGG | + | chr4.3:69422988-69423007 | MS.gene88048:intron | 30.0% | |
| CATCTTGCATCTTACTATAT+TGG | - | chr4.3:69421505-69421524 | None:intergenic | 30.0% | |
| GATAAAAAAAAACTACCACG+AGG | - | chr4.3:69420616-69420635 | None:intergenic | 30.0% | |
| GATGAATTTCCCAAATCATA+AGG | - | chr4.3:69423026-69423045 | None:intergenic | 30.0% | |
| GATGTTCTAGTCTAAATCTT+GGG | + | chr4.3:69421521-69421540 | MS.gene88048:intron | 30.0% | |
| TAATCGAAAAACTAAGATGC+AGG | - | chr4.3:69419718-69419737 | None:intergenic | 30.0% | |
| TAGAATACCATGTGAAATGA+TGG | - | chr4.3:69419651-69419670 | None:intergenic | 30.0% | |
| TATAGGAACCAATATGTAGT+GGG | + | chr4.3:69421790-69421809 | MS.gene88048:intron | 30.0% | |
| TATCTTGAATAGGAAACACA+AGG | + | chr4.3:69422184-69422203 | MS.gene88048:intron | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | - | chr4.3:69420793-69420812 | None:intergenic | 30.0% | |
| TCTCTTATTCTTGCTTGTTT+GGG | + | chr4.3:69422453-69422472 | MS.gene88048:intron | 30.0% | |
| TGAAAAAGTGAAAACCATGA+TGG | - | chr4.3:69421144-69421163 | None:intergenic | 30.0% | |
| TGTAGGGAAAAGAATATATC+AGG | + | chr4.3:69423641-69423660 | MS.gene88048:intron | 30.0% | |
| TGTTTGAATAGGTTTAAGTG+GGG | + | chr4.3:69420254-69420273 | MS.gene88048:intron | 30.0% | |
| TTCCCTTCGTCTATATAAAA+TGG | + | chr4.3:69422424-69422443 | MS.gene88048:intron | 30.0% | |
| TTGAATCTTGAGCAAACTAA+CGG | + | chr4.3:69420713-69420732 | MS.gene88048:intron | 30.0% | |
| TTGCTTGTCTTACTTCTTAT+TGG | + | chr4.3:69420818-69420837 | MS.gene88048:intron | 30.0% | |
| TTGGTTGACAATCTATTGTT+TGG | + | chr4.3:69423161-69423180 | MS.gene88048:intron | 30.0% | |
| TTTACTCTATCAAGCAAGAA+AGG | - | chr4.3:69423680-69423699 | None:intergenic | 30.0% | |
| ! | AATTCACAGATTTAACTTCC+AGG | - | chr4.3:69422392-69422411 | None:intergenic | 30.0% |
| ! | ACCTTTGCGTATTTTACTTT+TGG | + | chr4.3:69421557-69421576 | MS.gene88048:intron | 30.0% |
| ! | ACTATTGCAATTTTAGATGG+CGG | + | chr4.3:69419830-69419849 | MS.gene88048:CDS | 30.0% |
| ! | ATTCACAGATTTAACTTCCA+GGG | - | chr4.3:69422391-69422410 | None:intergenic | 30.0% |
| ! | CAAAATAGGCCTTATGATTT+GGG | + | chr4.3:69423014-69423033 | MS.gene88048:intron | 30.0% |
| ! | GCAACTATTGCAATTTTAGA+TGG | + | chr4.3:69419827-69419846 | MS.gene88048:CDS | 30.0% |
| ! | GTTCCATTTTATATAGACGA+AGG | - | chr4.3:69422430-69422449 | None:intergenic | 30.0% |
| ! | GTTTTCGCCTATCATTATTA+TGG | + | chr4.3:69423068-69423087 | MS.gene88048:intron | 30.0% |
| ! | TAAGCCACAACAAGTATTTT+TGG | - | chr4.3:69421671-69421690 | None:intergenic | 30.0% |
| ! | TCAAAATAGGCCTTATGATT+TGG | + | chr4.3:69423013-69423032 | MS.gene88048:intron | 30.0% |
| ! | TCGATTATGCTCATGTTTTT+AGG | + | chr4.3:69419731-69419750 | MS.gene88048:intron | 30.0% |
| ! | TCTAAAATTGCAATAGTTGC+AGG | - | chr4.3:69419827-69419846 | None:intergenic | 30.0% |
| !! | ATTGTGATGGAATTCCATTT+TGG | + | chr4.3:69422708-69422727 | MS.gene88048:intron | 30.0% |
| !! | CAATCGGTTTTCATAATGAA+TGG | + | chr4.3:69421476-69421495 | MS.gene88048:intron | 30.0% |
| !! | CAATTCACTGGTTTCAAAAT+AGG | + | chr4.3:69423000-69423019 | MS.gene88048:intron | 30.0% |
| !! | CCTTTGCGTATTTTACTTTT+GGG | + | chr4.3:69421558-69421577 | MS.gene88048:intron | 30.0% |
| !! | CGATTATGCTCATGTTTTTA+GGG | + | chr4.3:69419732-69419751 | MS.gene88048:intron | 30.0% |
| !! | CTGCAAGGTACTTTAAATTT+TGG | + | chr4.3:69422267-69422286 | MS.gene88048:intron | 30.0% |
| !! | GTTTGCAAATTTTGAGGATA+TGG | - | chr4.3:69419761-69419780 | None:intergenic | 30.0% |
| !! | TATTGGTGTTGGATTTGAAA+TGG | + | chr4.3:69420036-69420055 | MS.gene88048:intron | 30.0% |
| !! | TGTTTCTGCAACAATGTTTT+TGG | + | chr4.3:69421238-69421257 | MS.gene88048:CDS | 30.0% |
| !!! | AACAATGTTTTTGGCTTCTA+TGG | + | chr4.3:69421247-69421266 | MS.gene88048:CDS | 30.0% |
| !!! | AACCACTTTTTGACAACTTT+TGG | - | chr4.3:69420916-69420935 | None:intergenic | 30.0% |
| !!! | CTATTTGACGAGCTTTATTT+TGG | - | chr4.3:69420445-69420464 | None:intergenic | 30.0% |
| !!! | GAAATAACTCTGCTGTTTTA+TGG | + | chr4.3:69422137-69422156 | MS.gene88048:intron | 30.0% |
| !!! | TACTACTCGTGTTATTTTTG+TGG | + | chr4.3:69419956-69419975 | MS.gene88048:intron | 30.0% |
| !!! | TTTTTTATCATTTGCAGCTG+AGG | + | chr4.3:69420627-69420646 | MS.gene88048:intron | 30.0% |
| AAATTTGCAAACTGCGAAAG+AGG | + | chr4.3:69419769-69419788 | MS.gene88048:CDS | 35.0% | |
| AATGTTTCCCTTGCCTATTA+AGG | - | chr4.3:69423242-69423261 | None:intergenic | 35.0% | |
| ACCTATTCAAACAAAAGAGC+AGG | - | chr4.3:69420247-69420266 | None:intergenic | 35.0% | |
| AGCAAGGATGATAAACCATT+CGG | - | chr4.3:69422297-69422316 | None:intergenic | 35.0% | |
| AGTCAATATTGGATATTCCC+CGG | + | chr4.3:69422069-69422088 | MS.gene88048:CDS | 35.0% | |
| ATCAATCACGATTCCATTCA+TGG | + | chr4.3:69422652-69422671 | MS.gene88048:intron | 35.0% | |
| ATGTTTGAGAAACCACAAGT+TGG | - | chr4.3:69423048-69423067 | None:intergenic | 35.0% | |
| CACAGAAACTTCACTTATGA+AGG | - | chr4.3:69421065-69421084 | None:intergenic | 35.0% | |
| CAGAAATTCCCACTACATAT+TGG | - | chr4.3:69421801-69421820 | None:intergenic | 35.0% | |
| CATCAGATGTGAATCCAAAA+TGG | - | chr4.3:69422725-69422744 | None:intergenic | 35.0% | |
| CCCAAAAGTAAAATACGCAA+AGG | - | chr4.3:69421561-69421580 | None:intergenic | 35.0% | |
| CTCTCTTATTCTTGCTTGTT+TGG | + | chr4.3:69422452-69422471 | MS.gene88048:intron | 35.0% | |
| GAAACTGATACAGATTGTGA+TGG | + | chr4.3:69422695-69422714 | MS.gene88048:intron | 35.0% | |
| GAATCTACCATCATTTCACA+TGG | + | chr4.3:69419641-69419660 | MS.gene88048:CDS | 35.0% | |
| GACAATCTATTGTTTGGTCA+TGG | + | chr4.3:69423167-69423186 | MS.gene88048:intron | 35.0% | |
| GCACTCATAATTCACTAACT+TGG | + | chr4.3:69422561-69422580 | MS.gene88048:intron | 35.0% | |
| GGTGCAGTGTTTATAAGTAA+CGG | - | chr4.3:69421123-69421142 | None:intergenic | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | + | chr4.3:69420911-69420930 | MS.gene88048:intron | 35.0% | |
| GTGAAGAATAATGCCCTTAT+TGG | + | chr4.3:69423915-69423934 | MS.gene88048:CDS | 35.0% | |
| TAACAATCCTGCAAATTGAC+TGG | + | chr4.3:69420066-69420085 | MS.gene88048:intron | 35.0% | |
| TCAATCACGATTCCATTCAT+GGG | + | chr4.3:69422653-69422672 | MS.gene88048:intron | 35.0% | |
| TGAATGTGACAACTTTCGAA+AGG | - | chr4.3:69419470-69419489 | None:intergenic | 35.0% | |
| TGCTGGTGTAAAGTCAATAT+TGG | + | chr4.3:69422058-69422077 | MS.gene88048:CDS | 35.0% | |
| TGTGTCCACAGTTTCTTAAT+GGG | + | chr4.3:69421286-69421305 | MS.gene88048:intron | 35.0% | |
| TTAATTTCCAGGTTCCATGT+CGG | + | chr4.3:69423191-69423210 | MS.gene88048:intron | 35.0% | |
| TTATAAACACTGCACCATCA+TGG | + | chr4.3:69421127-69421146 | MS.gene88048:intron | 35.0% | |
| TTATAATCAACAGGGGAACT+GGG | - | chr4.3:69422871-69422890 | None:intergenic | 35.0% | |
| TTCTCTTCATTCCATCGTAT+TGG | + | chr4.3:69420019-69420038 | MS.gene88048:intron | 35.0% | |
| TTTATAATCAACAGGGGAAC+TGG | - | chr4.3:69422872-69422891 | None:intergenic | 35.0% | |
| ! | AGCAACTTTAGCTCCAATAA+GGG | - | chr4.3:69423931-69423950 | None:intergenic | 35.0% |
| ! | CTATTGCAATTTTAGATGGC+GGG | + | chr4.3:69419831-69419850 | MS.gene88048:CDS | 35.0% |
| ! | GGATGAGCATCTTTAAAAAG+AGG | - | chr4.3:69422850-69422869 | None:intergenic | 35.0% |
| ! | TACGCAAAGGTAGATTTGTT+TGG | - | chr4.3:69421548-69421567 | None:intergenic | 35.0% |
| ! | TACGCCAAAAATACTTGTTG+TGG | + | chr4.3:69421664-69421683 | MS.gene88048:intron | 35.0% |
| ! | TCGGTTTTCATAATGAATGG+TGG | + | chr4.3:69421479-69421498 | MS.gene88048:intron | 35.0% |
| ! | TGAGCTAAATTTTGCATGAC+AGG | + | chr4.3:69420971-69420990 | MS.gene88048:intron | 35.0% |
| ! | TTCGCAGTTTGCAAATTTTG+AGG | - | chr4.3:69419767-69419786 | None:intergenic | 35.0% |
| ! | TTGTTTTCCAGTCAATTTGC+AGG | - | chr4.3:69420076-69420095 | None:intergenic | 35.0% |
| !! | TTTCTGAAGCGTTATCACTT+GGG | + | chr4.3:69419600-69419619 | MS.gene88048:CDS | 35.0% |
| !!! | CTATCTATGTTGCTTTTAGG+TGG | + | chr4.3:69421190-69421209 | MS.gene88048:intron | 35.0% |
| !!! | CTTTAAAATTTTCTGCAGGC+TGG | + | chr4.3:69421364-69421383 | MS.gene88048:intron | 35.0% |
| !!! | TGCAGGTTTTAGTTGTGAAA+AGG | - | chr4.3:69419701-69419720 | None:intergenic | 35.0% |
| !!! | TTCTTCAAGGGCTTTTTTGA+TGG | - | chr4.3:69423458-69423477 | None:intergenic | 35.0% |
| AAAAAGCCCTTGAAGAAGCA+AGG | + | chr4.3:69423461-69423480 | MS.gene88048:CDS | 40.0% | |
| AAGTTCACCTTGCTTCTTCA+AGG | - | chr4.3:69423471-69423490 | None:intergenic | 40.0% | |
| AATATTGCCTCAGCCAAGTT+TGG | + | chr4.3:69421614-69421633 | MS.gene88048:intron | 40.0% | |
| ACGTCATTCAAAATCTGCCA+TGG | - | chr4.3:69422784-69422803 | None:intergenic | 40.0% | |
| AGAAGCAAACATCAAGCTCA+AGG | + | chr4.3:69423360-69423379 | MS.gene88048:intron | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | + | chr4.3:69420854-69420873 | MS.gene88048:intron | 40.0% | |
| AGCTTCGTCAATCAATGTGA+AGG | + | chr4.3:69419565-69419584 | MS.gene88048:CDS | 40.0% | |
| AGTTCACCTTGCTTCTTCAA+GGG | - | chr4.3:69423470-69423489 | None:intergenic | 40.0% | |
| ATACCAGATATTCAAGGGTC+CGG | - | chr4.3:69422091-69422110 | None:intergenic | 40.0% | |
| ATGAAATGCTTGCTCCTAAC+TGG | + | chr4.3:69419932-69419951 | MS.gene88048:intron | 40.0% | |
| CAAATCCAACACCAATACGA+TGG | - | chr4.3:69420033-69420052 | None:intergenic | 40.0% | |
| CAGATCCCATTAAGAAACTG+TGG | - | chr4.3:69421294-69421313 | None:intergenic | 40.0% | |
| CATTTATACGCTGCTGAGAA+AGG | - | chr4.3:69422362-69422381 | None:intergenic | 40.0% | |
| CGTCATTCAAAATCTGCCAT+GGG | - | chr4.3:69422783-69422802 | None:intergenic | 40.0% | |
| CTGTGTCCACAGTTTCTTAA+TGG | + | chr4.3:69421285-69421304 | MS.gene88048:intron | 40.0% | |
| CTTGATGCTGTGAAAAATGC+AGG | - | chr4.3:69422244-69422263 | None:intergenic | 40.0% | |
| CTTGCTCTGCTAAGAGAAAA+CGG | + | chr4.3:69423957-69423976 | MS.gene88048:CDS | 40.0% | |
| GATAGAGTAAATGCACTCAC+CGG | + | chr4.3:69423689-69423708 | MS.gene88048:CDS | 40.0% | |
| GGATTGGAATGTAAGCAGTA+TGG | + | chr4.3:69423115-69423134 | MS.gene88048:intron | 40.0% | |
| GTCTTTGTAATCAATCCTCG+TGG | + | chr4.3:69420598-69420617 | MS.gene88048:intron | 40.0% | |
| TAAGATTTAACGCACGGGAT+TGG | + | chr4.3:69423099-69423118 | MS.gene88048:intron | 40.0% | |
| TAAGTGGGGAAGAACTTGAA+AGG | + | chr4.3:69420268-69420287 | MS.gene88048:CDS | 40.0% | |
| TAATTTCCAGGTTCCATGTC+GGG | + | chr4.3:69423192-69423211 | MS.gene88048:intron | 40.0% | |
| TCCTATTCCTCAAGAACAGT+CGG | + | chr4.3:69423408-69423427 | MS.gene88048:CDS | 40.0% | |
| TCTTCGTCGACACTTTGATT+CGG | + | chr4.3:69419348-69419367 | MS.gene88048:CDS | 40.0% | |
| TGCTAAGAGAAAACGGACAA+AGG | + | chr4.3:69423964-69423983 | MS.gene88048:CDS | 40.0% | |
| TGGGAAATTCATCCAACTTG+TGG | + | chr4.3:69423033-69423052 | MS.gene88048:intron | 40.0% | |
| TGTGCTTCCTTAATAGGCAA+GGG | + | chr4.3:69423232-69423251 | MS.gene88048:intron | 40.0% | |
| TTGGTCATGGCTTAATTTCC+AGG | + | chr4.3:69423180-69423199 | MS.gene88048:intron | 40.0% | |
| ! | ACTTGAAAGGTTGGCTACTT+TGG | + | chr4.3:69420281-69420300 | MS.gene88048:CDS | 40.0% |
| ! | ATTAAGGAAGCACACTCTTC+AGG | - | chr4.3:69423226-69423245 | None:intergenic | 40.0% |
| ! | CAGCAACTTTAGCTCCAATA+AGG | - | chr4.3:69423932-69423951 | None:intergenic | 40.0% |
| ! | CATTTTTCTTTGGGCAGCTA+TGG | + | chr4.3:69421983-69422002 | MS.gene88048:intron | 40.0% |
| ! | CTTGAAAGGTTGGCTACTTT+GGG | + | chr4.3:69420282-69420301 | MS.gene88048:CDS | 40.0% |
| ! | CTTTTGTGAAAGGCCAAACT+TGG | - | chr4.3:69421630-69421649 | None:intergenic | 40.0% |
| ! | GAAGAGTGTGCTTCCTTAAT+AGG | + | chr4.3:69423226-69423245 | MS.gene88048:CDS | 40.0% |
| ! | GCATATGTTGTGAGTGCTTT+TGG | + | chr4.3:69420339-69420358 | MS.gene88048:intron | 40.0% |
| ! | GCATTTTTCACAGCATCAAG+TGG | + | chr4.3:69422244-69422263 | MS.gene88048:CDS | 40.0% |
| ! | GTTTTCTCTTAGCAGAGCAA+GGG | - | chr4.3:69423958-69423977 | None:intergenic | 40.0% |
| ! | TCATTCCATCGTATTGGTGT+TGG | + | chr4.3:69420025-69420044 | MS.gene88048:intron | 40.0% |
| ! | TTAAGGAAGCACACTCTTCA+GGG | - | chr4.3:69423225-69423244 | None:intergenic | 40.0% |
| !! | CTTGACTCATCACTTTTGAG+AGG | - | chr4.3:69422591-69422610 | None:intergenic | 40.0% |
| !! | GAAGGTATTGTGAGAGAGAA+TGG | + | chr4.3:69419794-69419813 | MS.gene88048:CDS | 40.0% |
| !! | GCCTGCTCTTTTGTTTGAAT+AGG | + | chr4.3:69420243-69420262 | MS.gene88048:intron | 40.0% |
| !! | GTCCCTGTATCATGTCATTT+TGG | + | chr4.3:69421325-69421344 | MS.gene88048:intron | 40.0% |
| !! | GTCGGAAGTGGAATTTTGAT+AGG | + | chr4.3:69423382-69423401 | MS.gene88048:CDS | 40.0% |
| !! | GTTTCTGAAGCGTTATCACT+TGG | + | chr4.3:69419599-69419618 | MS.gene88048:CDS | 40.0% |
| AACACGAGTAGTAGCCAGTT+AGG | - | chr4.3:69419949-69419968 | None:intergenic | 45.0% | |
| AGCTCAGAAAACAGCTCGAA+GGG | + | chr4.3:69420311-69420330 | MS.gene88048:CDS | 45.0% | |
| ATTCACGTCTTTGTGACTGG+TGG | + | chr4.3:69421388-69421407 | MS.gene88048:CDS | 45.0% | |
| CAAACTGCGAAAGAGGTTGA+AGG | + | chr4.3:69419776-69419795 | MS.gene88048:CDS | 45.0% | |
| CAATGTGAAGGTAGCTTCAG+AGG | + | chr4.3:69419577-69419596 | MS.gene88048:CDS | 45.0% | |
| CCAGCACATATAACTGCTAC+TGG | - | chr4.3:69422044-69422063 | None:intergenic | 45.0% | |
| CCAGTAGCAGTTATATGTGC+TGG | + | chr4.3:69422041-69422060 | MS.gene88048:CDS | 45.0% | |
| CTGACACAGTCAACAAGGTA+CGG | + | chr4.3:69419371-69419390 | MS.gene88048:intron | 45.0% | |
| GAGGATACTTGAAGCAAGTG+AGG | - | chr4.3:69423720-69423739 | None:intergenic | 45.0% | |
| GCAAACATCAAGCTCAAGGT+CGG | + | chr4.3:69423364-69423383 | MS.gene88048:CDS | 45.0% | |
| GCGTATAAATGCATTCACCC+TGG | + | chr4.3:69422371-69422390 | MS.gene88048:intron | 45.0% | |
| GGGTTTGATATGCAGCATAC+CGG | + | chr4.3:69419527-69419546 | MS.gene88048:intron | 45.0% | |
| GGTATTCACGTCTTTGTGAC+TGG | + | chr4.3:69421385-69421404 | MS.gene88048:CDS | 45.0% | |
| GTGTGCTTCCTTAATAGGCA+AGG | + | chr4.3:69423231-69423250 | MS.gene88048:intron | 45.0% | |
| TACCAGATATTCAAGGGTCC+GGG | - | chr4.3:69422090-69422109 | None:intergenic | 45.0% | |
| TACTGGTGTTCTTCCAAGCT+CGG | - | chr4.3:69422027-69422046 | None:intergenic | 45.0% | |
| TCTTCAGATATCACCGAGCT+TGG | + | chr4.3:69422011-69422030 | MS.gene88048:CDS | 45.0% | |
| TCTTTGTGACTGGTGGGATT+GGG | + | chr4.3:69421395-69421414 | MS.gene88048:CDS | 45.0% | |
| TGCAGCAGCAAAGTCAACAT+GGG | - | chr4.3:69420166-69420185 | None:intergenic | 45.0% | |
| TGGCATCTTCAGCAGCTTTA+CGG | + | chr4.3:69419317-69419336 | MS.gene88048:CDS | 45.0% | |
| TGGGAATTTCTGTGCAGTGT+GGG | + | chr4.3:69421809-69421828 | MS.gene88048:intron | 45.0% | |
| TGGGGAAGAACTTGAAAGGT+TGG | + | chr4.3:69420272-69420291 | MS.gene88048:CDS | 45.0% | |
| TTCACGTCTTTGTGACTGGT+GGG | + | chr4.3:69421389-69421408 | MS.gene88048:CDS | 45.0% | |
| TTGCAGCAGCAAAGTCAACA+TGG | - | chr4.3:69420167-69420186 | None:intergenic | 45.0% | |
| ! | CAAAATCTGCCATGGGTTGA+GGG | - | chr4.3:69422776-69422795 | None:intergenic | 45.0% |
| ! | CGTTTTCTCTTAGCAGAGCA+AGG | - | chr4.3:69423959-69423978 | None:intergenic | 45.0% |
| ! | TAAGGAAGCACACTCTTCAG+GGG | - | chr4.3:69423224-69423243 | None:intergenic | 45.0% |
| ! | TCAAAATCTGCCATGGGTTG+AGG | - | chr4.3:69422777-69422796 | None:intergenic | 45.0% |
| ACCAGATATTCAAGGGTCCG+GGG | - | chr4.3:69422089-69422108 | None:intergenic | 50.0% | |
| AGAGTAAATGCACTCACCGG+AGG | + | chr4.3:69423692-69423711 | MS.gene88048:CDS | 50.0% | |
| AGCTCCAGCAGCATTAACTC+CGG | - | chr4.3:69419549-69419568 | None:intergenic | 50.0% | |
| AGTAGCACCATTTCCACCTC+TGG | - | chr4.3:69421216-69421235 | None:intergenic | 50.0% | |
| ATCAAGCTCAAGGTCGGAAG+TGG | + | chr4.3:69423370-69423389 | MS.gene88048:CDS | 50.0% | |
| CATACCGGAGTTAATGCTGC+TGG | + | chr4.3:69419542-69419561 | MS.gene88048:CDS | 50.0% | |
| CTTTGTGACTGGTGGGATTG+GGG | + | chr4.3:69421396-69421415 | MS.gene88048:CDS | 50.0% | |
| GAGCTCAGAAAACAGCTCGA+AGG | + | chr4.3:69420310-69420329 | MS.gene88048:CDS | 50.0% | |
| GCCGACTGTTCTTGAGGAAT+AGG | - | chr4.3:69423412-69423431 | None:intergenic | 50.0% | |
| GTCTTTGTGACTGGTGGGAT+TGG | + | chr4.3:69421394-69421413 | MS.gene88048:CDS | 50.0% | |
| GTGGGAATTTCTGTGCAGTG+TGG | + | chr4.3:69421808-69421827 | MS.gene88048:intron | 50.0% | |
| TATCTACCCGACATGGAACC+TGG | - | chr4.3:69423201-69423220 | None:intergenic | 50.0% | |
| TGAAAGGCCAAACTTGGCTG+AGG | - | chr4.3:69421624-69421643 | None:intergenic | 50.0% | |
| TTCGGCTGACACAGTCAACA+AGG | + | chr4.3:69419366-69419385 | MS.gene88048:CDS | 50.0% | |
| TTTGTGACTGGTGGGATTGG+GGG | + | chr4.3:69421397-69421416 | MS.gene88048:CDS | 50.0% | |
| !! | CGAGCTGTTTTCTGAGCTCT+GGG | - | chr4.3:69420309-69420328 | None:intergenic | 50.0% |
| !! | TCGAGCTGTTTTCTGAGCTC+TGG | - | chr4.3:69420310-69420329 | None:intergenic | 50.0% |
| !! | TTAGATGGCGGGCCTATCAT+AGG | + | chr4.3:69419842-69419861 | MS.gene88048:CDS | 50.0% |
| !!! | TGTTGCTTTTAGGTGGCCAG+AGG | + | chr4.3:69421197-69421216 | MS.gene88048:intron | 50.0% |
| ATTGGGGGAGTTCACAGGCA+TGG | + | chr4.3:69421412-69421431 | MS.gene88048:CDS | 55.0% | |
| CACAGCATCAAGTGGCTGCA+AGG | + | chr4.3:69422252-69422271 | MS.gene88048:CDS | 55.0% | |
| CCAGAAGCCGACTGTTCTTG+AGG | - | chr4.3:69423418-69423437 | None:intergenic | 55.0% | |
| TAGGTGGCCAGAGGTGGAAA+TGG | + | chr4.3:69421206-69421225 | MS.gene88048:intron | 55.0% | |
| TCCCCGGACCCTTGAATATC+TGG | + | chr4.3:69422085-69422104 | MS.gene88048:CDS | 55.0% | |
| TTGAGTGCACCCTCAACCCA+TGG | + | chr4.3:69422764-69422783 | MS.gene88048:intron | 55.0% | |
| TTGGGGGAGTTCACAGGCAT+GGG | + | chr4.3:69421413-69421432 | MS.gene88048:CDS | 55.0% | |
| ! | CCTCAAGAACAGTCGGCTTC+TGG | + | chr4.3:69423415-69423434 | MS.gene88048:CDS | 55.0% |
| ! | TGAAGCAAGTGAGGCACCTC+CGG | - | chr4.3:69423711-69423730 | None:intergenic | 55.0% |
| !! | TCAGGGGTATCTACCCGACA+TGG | - | chr4.3:69423208-69423227 | None:intergenic | 55.0% |
| !! | TGCTTTTAGGTGGCCAGAGG+TGG | + | chr4.3:69421200-69421219 | MS.gene88048:intron | 55.0% |
| GTGGGATTGGGGGAGTTCAC+AGG | + | chr4.3:69421407-69421426 | MS.gene88048:CDS | 60.0% | |
| TGGGCGTGCAGTTGTTGCTC+TGG | + | chr4.3:69419619-69419638 | MS.gene88048:CDS | 60.0% | |
| TGGGGGAGTTCACAGGCATG+GGG | + | chr4.3:69421414-69421433 | MS.gene88048:CDS | 60.0% | |
| ! | GAGGGTGCACTCAACTGTGC+AGG | - | chr4.3:69422758-69422777 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 69419316 | 69423989 | 69419316 | ID=MS.gene88048 |
| chr4.3 | mRNA | 69419316 | 69423989 | 69419316 | ID=MS.gene88048.t1;Parent=MS.gene88048 |
| chr4.3 | exon | 69419316 | 69419387 | 69419316 | ID=MS.gene88048.t1.exon1;Parent=MS.gene88048.t1 |
| chr4.3 | CDS | 69419316 | 69419387 | 69419316 | ID=cds.MS.gene88048.t1;Parent=MS.gene88048.t1 |
| chr4.3 | exon | 69419542 | 69419662 | 69419542 | ID=MS.gene88048.t1.exon2;Parent=MS.gene88048.t1 |
| chr4.3 | CDS | 69419542 | 69419662 | 69419542 | ID=cds.MS.gene88048.t1;Parent=MS.gene88048.t1 |
| chr4.3 | exon | 69419753 | 69419863 | 69419753 | ID=MS.gene88048.t1.exon3;Parent=MS.gene88048.t1 |
| chr4.3 | CDS | 69419753 | 69419863 | 69419753 | ID=cds.MS.gene88048.t1;Parent=MS.gene88048.t1 |
| chr4.3 | exon | 69420265 | 69420347 | 69420265 | ID=MS.gene88048.t1.exon4;Parent=MS.gene88048.t1 |
| chr4.3 | CDS | 69420265 | 69420347 | 69420265 | ID=cds.MS.gene88048.t1;Parent=MS.gene88048.t1 |
| chr4.3 | exon | 69421209 | 69421268 | 69421209 | ID=MS.gene88048.t1.exon5;Parent=MS.gene88048.t1 |
| chr4.3 | CDS | 69421209 | 69421268 | 69421209 | ID=cds.MS.gene88048.t1;Parent=MS.gene88048.t1 |
| chr4.3 | exon | 69421382 | 69421442 | 69421382 | ID=MS.gene88048.t1.exon6;Parent=MS.gene88048.t1 |
| chr4.3 | CDS | 69421382 | 69421442 | 69421382 | ID=cds.MS.gene88048.t1;Parent=MS.gene88048.t1 |
| chr4.3 | exon | 69422000 | 69422106 | 69422000 | ID=MS.gene88048.t1.exon7;Parent=MS.gene88048.t1 |
| chr4.3 | CDS | 69422000 | 69422106 | 69422000 | ID=cds.MS.gene88048.t1;Parent=MS.gene88048.t1 |
| chr4.3 | exon | 69422196 | 69422273 | 69422196 | ID=MS.gene88048.t1.exon8;Parent=MS.gene88048.t1 |
| chr4.3 | CDS | 69422196 | 69422273 | 69422196 | ID=cds.MS.gene88048.t1;Parent=MS.gene88048.t1 |
| chr4.3 | exon | 69423202 | 69423247 | 69423202 | ID=MS.gene88048.t1.exon9;Parent=MS.gene88048.t1 |
| chr4.3 | CDS | 69423202 | 69423247 | 69423202 | ID=cds.MS.gene88048.t1;Parent=MS.gene88048.t1 |
| chr4.3 | exon | 69423362 | 69423482 | 69423362 | ID=MS.gene88048.t1.exon10;Parent=MS.gene88048.t1 |
| chr4.3 | CDS | 69423362 | 69423482 | 69423362 | ID=cds.MS.gene88048.t1;Parent=MS.gene88048.t1 |
| chr4.3 | exon | 69423646 | 69423731 | 69423646 | ID=MS.gene88048.t1.exon11;Parent=MS.gene88048.t1 |
| chr4.3 | CDS | 69423646 | 69423731 | 69423646 | ID=cds.MS.gene88048.t1;Parent=MS.gene88048.t1 |
| chr4.3 | exon | 69423904 | 69423989 | 69423904 | ID=MS.gene88048.t1.exon12;Parent=MS.gene88048.t1 |
| chr4.3 | CDS | 69423904 | 69423989 | 69423904 | ID=cds.MS.gene88048.t1;Parent=MS.gene88048.t1 |
| Gene Sequence |
| Protein sequence |
