Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88132.t1 | XP_003602984.1 | 94.9 | 391 | 20 | 0 | 1 | 391 | 1 | 391 | 2.20E-209 | 738 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88132.t1 | Q9S7T8 | 50.4 | 389 | 185 | 4 | 5 | 387 | 4 | 390 | 9.7e-105 | 381.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88132.t1 | G7J5R9 | 94.9 | 391 | 20 | 0 | 1 | 391 | 1 | 391 | 1.6e-209 | 738.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene006610 | MS.gene88132 | PPI |
| MS.gene88132 | MS.gene065944 | PPI |
| MS.gene031697 | MS.gene88132 | PPI |
| MS.gene88132 | MS.gene045585 | PPI |
| MS.gene065945 | MS.gene88132 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88132.t1 | MTR_3g101130 | 94.885 | 391 | 20 | 0 | 1 | 391 | 1 | 391 | 0.0 | 757 |
| MS.gene88132.t1 | MTR_3g101180 | 65.414 | 399 | 127 | 4 | 1 | 388 | 1 | 399 | 8.61e-179 | 503 |
| MS.gene88132.t1 | MTR_7g050750 | 64.615 | 390 | 133 | 2 | 5 | 389 | 7 | 396 | 5.08e-175 | 493 |
| MS.gene88132.t1 | MTR_8g461160 | 63.520 | 392 | 138 | 2 | 1 | 387 | 1 | 392 | 6.20e-173 | 488 |
| MS.gene88132.t1 | MTR_7g050810 | 63.333 | 390 | 136 | 3 | 6 | 389 | 16 | 404 | 2.91e-168 | 476 |
| MS.gene88132.t1 | MTR_3g101010 | 63.753 | 389 | 134 | 3 | 5 | 389 | 4 | 389 | 4.82e-167 | 473 |
| MS.gene88132.t1 | MTR_3g101200 | 63.846 | 390 | 115 | 4 | 1 | 388 | 26 | 391 | 2.45e-166 | 471 |
| MS.gene88132.t1 | MTR_3g018740 | 62.850 | 393 | 133 | 5 | 1 | 387 | 1 | 386 | 5.10e-166 | 470 |
| MS.gene88132.t1 | MTR_7g451890 | 61.440 | 389 | 145 | 2 | 6 | 389 | 14 | 402 | 3.38e-164 | 466 |
| MS.gene88132.t1 | MTR_7g047780 | 60.925 | 389 | 147 | 2 | 6 | 389 | 14 | 402 | 2.12e-162 | 461 |
| MS.gene88132.t1 | MTR_4g045707 | 60.406 | 394 | 145 | 4 | 1 | 389 | 1 | 388 | 5.17e-161 | 457 |
| MS.gene88132.t1 | MTR_8g027395 | 60.814 | 393 | 143 | 3 | 1 | 389 | 12 | 397 | 1.62e-160 | 456 |
| MS.gene88132.t1 | MTR_4g088525 | 63.085 | 363 | 125 | 3 | 30 | 388 | 11 | 368 | 4.36e-155 | 442 |
| MS.gene88132.t1 | MTR_3g101030 | 58.524 | 393 | 144 | 3 | 15 | 389 | 38 | 429 | 5.14e-155 | 444 |
| MS.gene88132.t1 | MTR_8g027420 | 59.033 | 393 | 139 | 4 | 1 | 389 | 1 | 375 | 2.78e-153 | 437 |
| MS.gene88132.t1 | MTR_2g046030 | 57.908 | 392 | 147 | 7 | 5 | 387 | 4 | 386 | 4.38e-148 | 425 |
| MS.gene88132.t1 | MTR_2g045980 | 57.398 | 392 | 149 | 6 | 5 | 387 | 4 | 386 | 2.08e-147 | 423 |
| MS.gene88132.t1 | MTR_3g048000 | 57.841 | 389 | 132 | 6 | 7 | 388 | 28 | 391 | 7.77e-147 | 422 |
| MS.gene88132.t1 | MTR_4g088535 | 55.980 | 393 | 145 | 6 | 1 | 388 | 1 | 370 | 7.05e-139 | 401 |
| MS.gene88132.t1 | MTR_3g101050 | 56.614 | 378 | 140 | 6 | 15 | 387 | 38 | 396 | 1.55e-135 | 393 |
| MS.gene88132.t1 | MTR_3g015620 | 56.041 | 389 | 138 | 6 | 6 | 387 | 16 | 378 | 2.86e-132 | 384 |
| MS.gene88132.t1 | MTR_3g102920 | 54.637 | 399 | 129 | 7 | 4 | 388 | 49 | 409 | 5.40e-130 | 379 |
| MS.gene88132.t1 | MTR_3g101190 | 52.617 | 363 | 104 | 4 | 31 | 389 | 14 | 312 | 5.16e-117 | 343 |
| MS.gene88132.t1 | MTR_3g100995 | 64.567 | 254 | 84 | 3 | 139 | 389 | 14 | 264 | 1.15e-113 | 332 |
| MS.gene88132.t1 | MTR_7g050830 | 54.777 | 314 | 111 | 2 | 6 | 299 | 16 | 318 | 3.62e-108 | 321 |
| MS.gene88132.t1 | MTR_3g015760 | 62.308 | 260 | 91 | 4 | 132 | 387 | 23 | 279 | 1.90e-98 | 294 |
| MS.gene88132.t1 | MTR_3g100010 | 49.051 | 316 | 113 | 3 | 31 | 313 | 40 | 340 | 1.49e-97 | 294 |
| MS.gene88132.t1 | MTR_3g018747 | 57.854 | 261 | 89 | 3 | 132 | 387 | 9 | 253 | 3.50e-96 | 288 |
| MS.gene88132.t1 | MTR_3g114310 | 41.995 | 381 | 196 | 10 | 28 | 389 | 36 | 410 | 3.18e-83 | 260 |
| MS.gene88132.t1 | MTR_3g111160 | 62.326 | 215 | 73 | 2 | 180 | 389 | 9 | 220 | 1.06e-82 | 252 |
| MS.gene88132.t1 | MTR_3g100520 | 57.399 | 223 | 75 | 3 | 173 | 389 | 1 | 209 | 5.18e-82 | 250 |
| MS.gene88132.t1 | MTR_3g101110 | 54.430 | 237 | 73 | 4 | 135 | 363 | 71 | 280 | 3.31e-75 | 235 |
| MS.gene88132.t1 | MTR_2g046410 | 59.615 | 208 | 71 | 4 | 189 | 387 | 144 | 347 | 1.23e-74 | 236 |
| MS.gene88132.t1 | MTR_3g099970 | 59.487 | 195 | 60 | 2 | 132 | 323 | 20 | 198 | 6.27e-74 | 229 |
| MS.gene88132.t1 | MTR_3g101150 | 65.000 | 160 | 45 | 3 | 238 | 388 | 1 | 158 | 1.28e-62 | 198 |
| MS.gene88132.t1 | MTR_3g101020 | 57.838 | 185 | 52 | 3 | 206 | 389 | 1 | 160 | 1.39e-62 | 198 |
| MS.gene88132.t1 | MTR_3g102870 | 56.688 | 157 | 64 | 1 | 195 | 347 | 1 | 157 | 1.01e-52 | 173 |
| MS.gene88132.t1 | MTR_3g111150 | 48.603 | 179 | 66 | 3 | 8 | 186 | 1 | 153 | 3.93e-48 | 161 |
| MS.gene88132.t1 | MTR_3g100990 | 63.566 | 129 | 45 | 1 | 4 | 132 | 3 | 129 | 6.29e-43 | 157 |
| MS.gene88132.t1 | MTR_3g101140 | 51.261 | 119 | 47 | 2 | 271 | 389 | 9 | 116 | 1.73e-28 | 108 |
| MS.gene88132.t1 | MTR_4g093550 | 52.747 | 91 | 41 | 1 | 1 | 91 | 1 | 89 | 1.05e-20 | 86.3 |
| MS.gene88132.t1 | MTR_6g046890 | 62.121 | 66 | 25 | 0 | 23 | 88 | 14 | 79 | 1.68e-17 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88132.t1 | AT1G47710 | 50.386 | 389 | 185 | 4 | 5 | 387 | 4 | 390 | 4.40e-133 | 387 |
| MS.gene88132.t1 | AT1G47710 | 50.386 | 389 | 185 | 4 | 5 | 387 | 31 | 417 | 1.83e-132 | 386 |
| MS.gene88132.t1 | AT3G45220 | 43.909 | 394 | 200 | 5 | 6 | 386 | 5 | 390 | 1.71e-111 | 332 |
| MS.gene88132.t1 | AT2G25240 | 44.730 | 389 | 196 | 8 | 6 | 386 | 5 | 382 | 3.06e-108 | 323 |
| MS.gene88132.t1 | AT2G26390 | 42.092 | 392 | 206 | 6 | 6 | 386 | 5 | 386 | 8.55e-101 | 304 |
| MS.gene88132.t1 | AT1G62170 | 43.989 | 366 | 175 | 6 | 29 | 386 | 88 | 431 | 9.18e-97 | 295 |
| MS.gene88132.t1 | AT1G64030 | 43.005 | 386 | 198 | 6 | 5 | 386 | 4 | 371 | 3.43e-96 | 292 |
| MS.gene88132.t1 | AT2G14540 | 44.875 | 361 | 178 | 4 | 29 | 386 | 55 | 397 | 1.47e-93 | 286 |
| MS.gene88132.t1 | AT1G62170 | 40.351 | 399 | 175 | 7 | 29 | 386 | 88 | 464 | 8.76e-90 | 279 |
| MS.gene88132.t1 | AT2G35580 | 39.589 | 389 | 207 | 9 | 5 | 386 | 4 | 371 | 6.89e-86 | 266 |
| MS.gene88132.t1 | AT1G64010 | 47.685 | 216 | 90 | 5 | 173 | 386 | 1 | 195 | 8.49e-63 | 200 |
| MS.gene88132.t1 | AT1G64010 | 47.264 | 201 | 83 | 5 | 188 | 386 | 2 | 181 | 1.27e-55 | 181 |
| MS.gene88132.t1 | AT1G62160 | 41.709 | 199 | 87 | 5 | 195 | 386 | 42 | 218 | 1.13e-34 | 128 |
| MS.gene88132.t1 | AT1G63280 | 50.847 | 118 | 54 | 2 | 129 | 244 | 5 | 120 | 1.54e-32 | 119 |
| MS.gene88132.t1 | AT1G51330 | 44.643 | 112 | 59 | 2 | 130 | 238 | 29 | 140 | 6.41e-25 | 100 |
Find 0 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAAGGAAAATATATAT+AGG | + | 23677:110705-110724 | None:intergenic | 15.0% |
| !!! | TTTTATTGTTCTAAAAAAGA+AGG | + | 23677:110719-110738 | None:intergenic | 15.0% |
| !! | TTCATTGAAGTAAATGAAAA+AGG | - | 23677:111365-111384 | MS.gene88132:CDS | 20.0% |
| ! | AATATGTTAGAAACCCAAAT+CGG | + | 23677:111335-111354 | None:intergenic | 25.0% |
| ! | AGTATCAACAATTTCTTTGA+AGG | + | 23677:110637-110656 | None:intergenic | 25.0% |
| ! | ATCACTTGATTTCATAAACA+AGG | - | 23677:110677-110696 | MS.gene88132:CDS | 25.0% |
| ! | CTCTTATCAAAAACATGAAA+GGG | + | 23677:111481-111500 | None:intergenic | 25.0% |
| ! | GTTAATGCACTATACTTTAA+AGG | - | 23677:110897-110916 | MS.gene88132:CDS | 25.0% |
| ! | TCTCTTATCAAAAACATGAA+AGG | + | 23677:111482-111501 | None:intergenic | 25.0% |
| !! | CAGTTTATAAATGCTTTTGA+TGG | - | 23677:111023-111042 | MS.gene88132:CDS | 25.0% |
| !!! | TGTTTTTGATAGCAAATGTT+TGG | + | 23677:110361-110380 | None:intergenic | 25.0% |
| !!! | TTAAATTAGTGATTGATTCG+CGG | + | 23677:110317-110336 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTGAAGCATCAAA+TGG | + | 23677:110936-110955 | None:intergenic | 25.0% |
| AGTTTGTGTTTCAAAATCTC+AGG | + | 23677:111170-111189 | None:intergenic | 30.0% | |
| ATATCGTTGCCTTTCTTATA+AGG | + | 23677:111068-111087 | None:intergenic | 30.0% | |
| CCACGTTTCAAAATTTATTC+TGG | - | 23677:111227-111246 | MS.gene88132:CDS | 30.0% | |
| CGTCAAAAAAGTGAATGTAT+GGG | - | 23677:110797-110816 | MS.gene88132:CDS | 30.0% | |
| TATATTTGATGCTGTCGTAA+AGG | - | 23677:110764-110783 | MS.gene88132:CDS | 30.0% | |
| TGAACTTTCTAATGTGTCAA+AGG | - | 23677:111253-111272 | MS.gene88132:CDS | 30.0% | |
| TTATCAAAAACATGAAAGGG+TGG | + | 23677:111478-111497 | None:intergenic | 30.0% | |
| ! | CAACAATTTCTTTGAAGGAA+GGG | + | 23677:110632-110651 | None:intergenic | 30.0% |
| ! | TCAACAATTTCTTTGAAGGA+AGG | + | 23677:110633-110652 | None:intergenic | 30.0% |
| ! | TTCTTTTTGCTAGTCATGAA+GGG | + | 23677:111002-111021 | None:intergenic | 30.0% |
| !!! | CCAGAATAAATTTTGAAACG+TGG | + | 23677:111230-111249 | None:intergenic | 30.0% |
| !!! | CCATACATTCACTTTTTTGA+CGG | + | 23677:110799-110818 | None:intergenic | 30.0% |
| ATTAGTGATGTTCTTTCACC+TGG | - | 23677:110843-110862 | MS.gene88132:CDS | 35.0% | |
| CCGTCAAAAAAGTGAATGTA+TGG | - | 23677:110796-110815 | MS.gene88132:CDS | 35.0% | |
| CTTCGTCTTCCTTATAAGAA+AGG | - | 23677:111056-111075 | MS.gene88132:CDS | 35.0% | |
| CTTTCTTATAAGGAAGACGA+AGG | + | 23677:111058-111077 | None:intergenic | 35.0% | |
| GTGTTTCAAAATCTCAGGTT+TGG | + | 23677:111165-111184 | None:intergenic | 35.0% | |
| GTTAAGCTATTAATTGACCC+AGG | + | 23677:110864-110883 | None:intergenic | 35.0% | |
| TAACAATCCATCTCTTGCAT+CGG | + | 23677:111120-111139 | None:intergenic | 35.0% | |
| TCTAATGTGTCAAAGGAGTT+AGG | - | 23677:111260-111279 | MS.gene88132:CDS | 35.0% | |
| TCTGGTACAATACTCTTTGT+TGG | - | 23677:111509-111528 | MS.gene88132:CDS | 35.0% | |
| TGATGGAGGTTTGACAAAAA+TGG | - | 23677:111301-111320 | MS.gene88132:CDS | 35.0% | |
| TGGGCTAAAAAAGAGACAAA+CGG | - | 23677:110816-110835 | MS.gene88132:CDS | 35.0% | |
| TTAGTGATGTTCTTTCACCT+GGG | - | 23677:110844-110863 | MS.gene88132:CDS | 35.0% | |
| TTGATAAGAGACGATTTGTC+TGG | - | 23677:111491-111510 | MS.gene88132:CDS | 35.0% | |
| ! | CACTATACTTTAAAGGAGCA+TGG | - | 23677:110904-110923 | MS.gene88132:CDS | 35.0% |
| ! | CTTCTTTTTGCTAGTCATGA+AGG | + | 23677:111003-111022 | None:intergenic | 35.0% |
| ! | TGTCTTTTGTCAACTCTGTT+TGG | - | 23677:110583-110602 | MS.gene88132:CDS | 35.0% |
| !! | AATGGATTTTGATCCAAGGA+AGG | + | 23677:110487-110506 | None:intergenic | 35.0% |
| !! | GTTAGCTTTGATTGAGAAAG+TGG | - | 23677:111136-111155 | MS.gene88132:intron | 35.0% |
| !! | GTTGTTTTACCTTTCTCTGA+TGG | - | 23677:111284-111303 | MS.gene88132:CDS | 35.0% |
| AACAATCCATCTCTTGCATC+GGG | + | 23677:111119-111138 | None:intergenic | 40.0% | |
| GAAACACAAACTTCCACGTA+AGG | - | 23677:111178-111197 | MS.gene88132:CDS | 40.0% | |
| GAAATCAAGTGATCTGAGAG+TGG | + | 23677:110670-110689 | None:intergenic | 40.0% | |
| GAAGGAAGGGTAAACAGAAA+GGG | + | 23677:110619-110638 | None:intergenic | 40.0% | |
| GAGTTGACAAAAGACAACTG+TGG | + | 23677:110579-110598 | None:intergenic | 40.0% | |
| GGTCAGCTACAAAGTCTATT+GGG | + | 23677:111457-111476 | None:intergenic | 40.0% | |
| GTCAGCTACAAAGTCTATTG+GGG | + | 23677:111456-111475 | None:intergenic | 40.0% | |
| TAAGGAGTTGAGATGGTCAA+TGG | + | 23677:110505-110524 | None:intergenic | 40.0% | |
| TGAAGGAAGGGTAAACAGAA+AGG | + | 23677:110620-110639 | None:intergenic | 40.0% | |
| TGGTCAGCTACAAAGTCTAT+TGG | + | 23677:111458-111477 | None:intergenic | 40.0% | |
| ! | GTTTTACCTTTCTCTGATGG+AGG | - | 23677:111287-111306 | MS.gene88132:CDS | 40.0% |
| !! | AATTAGTGATTGATTCGCGG+TGG | + | 23677:110314-110333 | None:intergenic | 40.0% |
| !! | GGTCAATGGATTTTGATCCA+AGG | + | 23677:110491-110510 | None:intergenic | 40.0% |
| AAATGGCGAACTCTCCGATT+TGG | - | 23677:111318-111337 | MS.gene88132:CDS | 45.0% | |
| AATGGCGAACTCTCCGATTT+GGG | - | 23677:111319-111338 | MS.gene88132:CDS | 45.0% | |
| AGTCACTAGAACCGGACTAT+CGG | - | 23677:111403-111422 | MS.gene88132:CDS | 45.0% | |
| ATTGGGGTCGGAATTGAAGT+AGG | + | 23677:111440-111459 | None:intergenic | 45.0% | |
| CAACAAGAGGATTGAGCACT+TGG | + | 23677:111535-111554 | None:intergenic | 45.0% | |
| CAAGTGCTCAATCCTCTTGT+TGG | - | 23677:111533-111552 | MS.gene88132:CDS | 45.0% | |
| CACCGAGAAGGTGAAAATCA+CGG | + | 23677:110962-110981 | None:intergenic | 45.0% | |
| CCACGTAAGGAAGTGATAGT+GGG | - | 23677:111191-111210 | MS.gene88132:CDS | 45.0% | |
| CTACTATGCTGAGCACAGTT+TGG | + | 23677:110425-110444 | None:intergenic | 45.0% | |
| GAGAGGATAAGGAGTTGAGA+TGG | + | 23677:110512-110531 | None:intergenic | 45.0% | |
| GCTACAAAGTCTATTGGGGT+CGG | + | 23677:111452-111471 | None:intergenic | 45.0% | |
| GGAAAAGAGGTGAGAGGATA+AGG | + | 23677:110523-110542 | None:intergenic | 45.0% | |
| GTCAAACCTCCATCAGAGAA+AGG | + | 23677:111296-111315 | None:intergenic | 45.0% | |
| TCCACGTAAGGAAGTGATAG+TGG | - | 23677:111190-111209 | MS.gene88132:CDS | 45.0% | |
| TTTCTTCCCGATGCAAGAGA+TGG | - | 23677:111110-111129 | MS.gene88132:intron | 45.0% | |
| ! | AGCACAGTTTGGAGTGACAA+CGG | + | 23677:110414-110433 | None:intergenic | 45.0% |
| ! | GACCGTGATTTTCACCTTCT+CGG | - | 23677:110957-110976 | MS.gene88132:CDS | 45.0% |
| !! | AAGTGATAGTGGGTGACTTC+AGG | - | 23677:111201-111220 | MS.gene88132:CDS | 45.0% |
| !! | TGAAAAAGGCACTGAAGCTG+CGG | - | 23677:111379-111398 | MS.gene88132:CDS | 45.0% |
| AGACAACTGTGGACCACCAT+AGG | + | 23677:110568-110587 | None:intergenic | 50.0% | |
| CACAGAGGAAAAGAGGTGAG+AGG | + | 23677:110529-110548 | None:intergenic | 50.0% | |
| CCCACTATCACTTCCTTACG+TGG | + | 23677:111194-111213 | None:intergenic | 50.0% | |
| CGTCTAGCACAGAGGAAAAG+AGG | + | 23677:110536-110555 | None:intergenic | 50.0% | |
| GACAACTGTGGACCACCATA+GGG | + | 23677:110567-110586 | None:intergenic | 50.0% | |
| GAGAGAAGCTGACGTTGTGT+CGG | + | 23677:110465-110484 | None:intergenic | 50.0% | |
| GTCACTAGAACCGGACTATC+GGG | - | 23677:111404-111423 | MS.gene88132:CDS | 50.0% | |
| ! | CGTGATTTTCACCTTCTCGG+TGG | - | 23677:110960-110979 | MS.gene88132:CDS | 50.0% |
| ACGAGCACATCCCGATAGTC+CGG | + | 23677:111417-111436 | None:intergenic | 55.0% | |
| CGTCAGCTTCTCTCCTTCCT+TGG | - | 23677:110471-110490 | MS.gene88132:CDS | 55.0% | |
| GTGCTCAGCATAGTAGCTGC+CGG | - | 23677:110429-110448 | MS.gene88132:CDS | 55.0% | |
| TCTCGGTGGCAGCTCAATCA+AGG | - | 23677:110974-110993 | MS.gene88132:CDS | 55.0% | |
| TGATTGAGCTGCCACCGAGA+AGG | + | 23677:110974-110993 | None:intergenic | 55.0% | |
| !! | ATAGTAGCTGCCGGTTCCGA+GGG | - | 23677:110438-110457 | MS.gene88132:CDS | 55.0% |
| AGCAGCGTCGTCTAGCACAG+AGG | + | 23677:110544-110563 | None:intergenic | 60.0% | |
| CTAGACGACGCTGCTCCCTA+TGG | - | 23677:110549-110568 | MS.gene88132:CDS | 60.0% | |
| CTGACGTTGTGTCGGACCCT+CGG | + | 23677:110457-110476 | None:intergenic | 60.0% | |
| GCTGCGGCAGTCACTAGAAC+CGG | - | 23677:111395-111414 | MS.gene88132:CDS | 60.0% | |
| TTGTGTCGGACCCTCGGAAC+CGG | + | 23677:110451-110470 | None:intergenic | 60.0% | |
| !! | CATAGTAGCTGCCGGTTCCG+AGG | - | 23677:110437-110456 | MS.gene88132:CDS | 60.0% |
| GACGACGCTGCTCCCTATGG+TGG | - | 23677:110552-110571 | MS.gene88132:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 23677 | gene | 110303 | 111565 | 110303 | ID=MS.gene88132 |
| 23677 | mRNA | 110303 | 111565 | 110303 | ID=MS.gene88132.t1;Parent=MS.gene88132 |
| 23677 | exon | 111170 | 111565 | 111170 | ID=MS.gene88132.t1.exon1;Parent=MS.gene88132.t1 |
| 23677 | CDS | 111170 | 111565 | 111170 | ID=cds.MS.gene88132.t1;Parent=MS.gene88132.t1 |
| 23677 | exon | 110303 | 111082 | 110303 | ID=MS.gene88132.t1.exon2;Parent=MS.gene88132.t1 |
| 23677 | CDS | 110303 | 111082 | 110303 | ID=cds.MS.gene88132.t1;Parent=MS.gene88132.t1 |
| Gene Sequence |
| Protein sequence |
