Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88369.t1 | XP_003596474.1 | 93.2 | 474 | 32 | 0 | 1 | 474 | 1 | 474 | 2.70E-249 | 870.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88369.t1 | Q9FL69 | 56.0 | 493 | 186 | 11 | 1 | 473 | 1 | 482 | 2.9e-127 | 456.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88369.t1 | G7IR44 | 93.2 | 474 | 32 | 0 | 1 | 474 | 1 | 474 | 1.9e-249 | 870.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene88369 | MS.gene48056 | PPI |
MS.gene81379 | MS.gene88369 | PPI |
MS.gene88369 | MS.gene020723 | PPI |
MS.gene88369 | MS.gene020722 | PPI |
MS.gene63889 | MS.gene88369 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88369.t1 | MTR_2g080950 | 95.148 | 474 | 23 | 0 | 1 | 474 | 1 | 474 | 0.0 | 913 |
MS.gene88369.t1 | MTR_2g080950 | 94.563 | 423 | 23 | 0 | 52 | 474 | 1 | 423 | 0.0 | 803 |
MS.gene88369.t1 | MTR_2g080950 | 94.072 | 388 | 23 | 0 | 87 | 474 | 1 | 388 | 0.0 | 728 |
MS.gene88369.t1 | MTR_8g464390 | 71.130 | 478 | 121 | 6 | 1 | 473 | 1 | 466 | 0.0 | 605 |
MS.gene88369.t1 | MTR_8g464390 | 68.384 | 427 | 118 | 6 | 52 | 473 | 1 | 415 | 1.83e-175 | 499 |
MS.gene88369.t1 | MTR_6g080710 | 48.617 | 253 | 107 | 6 | 1 | 250 | 1 | 233 | 2.12e-68 | 220 |
MS.gene88369.t1 | MTR_2g030230 | 48.246 | 114 | 51 | 2 | 13 | 118 | 15 | 128 | 7.50e-28 | 113 |
MS.gene88369.t1 | MTR_8g088320 | 44.828 | 116 | 56 | 2 | 16 | 123 | 9 | 124 | 8.53e-27 | 110 |
MS.gene88369.t1 | MTR_4g074170 | 44.444 | 135 | 53 | 4 | 18 | 133 | 484 | 615 | 2.18e-26 | 113 |
MS.gene88369.t1 | MTR_7g020860 | 41.259 | 143 | 53 | 3 | 14 | 125 | 500 | 642 | 1.40e-25 | 110 |
MS.gene88369.t1 | MTR_8g100100 | 40.559 | 143 | 54 | 3 | 14 | 125 | 498 | 640 | 9.57e-25 | 108 |
MS.gene88369.t1 | MTR_8g100100 | 40.559 | 143 | 54 | 3 | 14 | 125 | 492 | 634 | 1.00e-24 | 108 |
MS.gene88369.t1 | MTR_7g020860 | 53.933 | 89 | 39 | 1 | 14 | 100 | 500 | 588 | 2.89e-24 | 106 |
MS.gene88369.t1 | MTR_8g038400 | 42.857 | 133 | 66 | 4 | 9 | 132 | 11 | 142 | 3.95e-24 | 103 |
MS.gene88369.t1 | MTR_3g017500 | 42.623 | 122 | 62 | 3 | 19 | 132 | 24 | 145 | 5.48e-24 | 103 |
MS.gene88369.t1 | MTR_3g017500 | 42.623 | 122 | 62 | 3 | 19 | 132 | 54 | 175 | 1.15e-23 | 103 |
MS.gene88369.t1 | MTR_8g067080 | 50.633 | 79 | 39 | 0 | 18 | 96 | 12 | 90 | 9.61e-23 | 100 |
MS.gene88369.t1 | MTR_8g067080 | 50.633 | 79 | 39 | 0 | 18 | 96 | 12 | 90 | 9.89e-23 | 100 |
MS.gene88369.t1 | MTR_8g471110 | 50.633 | 79 | 39 | 0 | 18 | 96 | 12 | 90 | 9.89e-23 | 100 |
MS.gene88369.t1 | MTR_3g098680 | 40.580 | 138 | 51 | 3 | 19 | 125 | 500 | 637 | 1.08e-22 | 102 |
MS.gene88369.t1 | MTR_8g067090 | 53.947 | 76 | 34 | 1 | 23 | 97 | 16 | 91 | 4.19e-22 | 98.6 |
MS.gene88369.t1 | MTR_8g471120 | 53.947 | 76 | 34 | 1 | 23 | 97 | 16 | 91 | 4.19e-22 | 98.6 |
MS.gene88369.t1 | MTR_1g069000 | 48.101 | 79 | 41 | 0 | 17 | 95 | 5 | 83 | 2.90e-20 | 93.6 |
MS.gene88369.t1 | MTR_7g099830 | 48.052 | 77 | 40 | 0 | 19 | 95 | 7 | 83 | 5.72e-20 | 92.4 |
MS.gene88369.t1 | MTR_8g103750 | 30.435 | 161 | 100 | 5 | 14 | 166 | 10 | 166 | 1.85e-17 | 85.9 |
MS.gene88369.t1 | MTR_6g086630 | 28.221 | 163 | 107 | 3 | 12 | 167 | 8 | 167 | 1.01e-16 | 83.2 |
MS.gene88369.t1 | MTR_6g027300 | 29.747 | 158 | 94 | 6 | 21 | 167 | 16 | 167 | 2.49e-14 | 75.9 |
MS.gene88369.t1 | MTR_6g027300 | 29.747 | 158 | 94 | 6 | 21 | 167 | 16 | 167 | 3.06e-14 | 75.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88369.t1 | AT5G54310 | 56.426 | 498 | 178 | 15 | 1 | 474 | 1 | 483 | 5.57e-164 | 472 |
MS.gene88369.t1 | AT3G17660 | 76.613 | 124 | 29 | 0 | 1 | 124 | 1 | 124 | 1.90e-68 | 217 |
MS.gene88369.t1 | AT3G17660 | 76.613 | 124 | 29 | 0 | 1 | 124 | 1 | 124 | 6.81e-68 | 217 |
MS.gene88369.t1 | AT3G17660 | 76.613 | 124 | 29 | 0 | 1 | 124 | 1 | 124 | 1.81e-67 | 216 |
MS.gene88369.t1 | AT3G17660 | 65.323 | 124 | 33 | 1 | 1 | 124 | 1 | 114 | 2.78e-52 | 176 |
MS.gene88369.t1 | AT3G17660 | 72.603 | 73 | 20 | 0 | 52 | 124 | 1 | 73 | 3.97e-33 | 124 |
MS.gene88369.t1 | AT4G05330 | 51.351 | 111 | 46 | 2 | 16 | 118 | 15 | 125 | 5.91e-29 | 117 |
MS.gene88369.t1 | AT4G05330 | 51.351 | 111 | 46 | 2 | 16 | 118 | 15 | 125 | 5.91e-29 | 117 |
MS.gene88369.t1 | AT4G21160 | 43.382 | 136 | 61 | 3 | 16 | 135 | 15 | 150 | 6.06e-27 | 111 |
MS.gene88369.t1 | AT4G21160 | 43.382 | 136 | 61 | 3 | 16 | 135 | 15 | 150 | 6.06e-27 | 111 |
MS.gene88369.t1 | AT4G21160 | 43.382 | 136 | 61 | 3 | 16 | 135 | 15 | 150 | 6.06e-27 | 111 |
MS.gene88369.t1 | AT4G21160 | 43.382 | 136 | 61 | 3 | 16 | 135 | 15 | 150 | 6.06e-27 | 111 |
MS.gene88369.t1 | AT5G13300 | 38.776 | 147 | 62 | 3 | 14 | 132 | 499 | 645 | 1.78e-25 | 110 |
MS.gene88369.t1 | AT3G07940 | 46.610 | 118 | 54 | 4 | 19 | 127 | 50 | 167 | 2.10e-24 | 102 |
MS.gene88369.t1 | AT3G07940 | 46.610 | 118 | 54 | 4 | 19 | 127 | 50 | 167 | 8.54e-24 | 103 |
MS.gene88369.t1 | AT1G60860 | 46.729 | 107 | 53 | 3 | 1 | 105 | 342 | 446 | 9.99e-24 | 105 |
MS.gene88369.t1 | AT1G60860 | 46.729 | 107 | 53 | 3 | 1 | 105 | 453 | 557 | 1.04e-23 | 105 |
MS.gene88369.t1 | AT1G60860 | 46.729 | 107 | 53 | 3 | 1 | 105 | 282 | 386 | 1.12e-23 | 104 |
MS.gene88369.t1 | AT5G61980 | 53.333 | 90 | 40 | 1 | 13 | 100 | 495 | 584 | 1.44e-23 | 104 |
MS.gene88369.t1 | AT1G10870 | 50.000 | 94 | 42 | 2 | 18 | 109 | 472 | 562 | 3.43e-22 | 100 |
MS.gene88369.t1 | AT1G10870 | 52.222 | 90 | 36 | 3 | 18 | 105 | 472 | 556 | 4.39e-22 | 100 |
MS.gene88369.t1 | AT3G53710 | 51.948 | 77 | 37 | 0 | 19 | 95 | 7 | 83 | 5.89e-22 | 98.6 |
MS.gene88369.t1 | AT3G53710 | 51.948 | 77 | 37 | 0 | 19 | 95 | 7 | 83 | 5.89e-22 | 98.6 |
MS.gene88369.t1 | AT3G53710 | 51.948 | 77 | 37 | 0 | 19 | 95 | 7 | 83 | 5.89e-22 | 98.6 |
MS.gene88369.t1 | AT2G37550 | 50.649 | 77 | 38 | 0 | 19 | 95 | 7 | 83 | 1.38e-21 | 97.4 |
MS.gene88369.t1 | AT2G37550 | 50.649 | 77 | 38 | 0 | 19 | 95 | 7 | 83 | 1.38e-21 | 97.4 |
MS.gene88369.t1 | AT2G35210 | 45.361 | 97 | 42 | 1 | 1 | 97 | 6 | 91 | 1.58e-21 | 96.3 |
MS.gene88369.t1 | AT2G35210 | 45.361 | 97 | 42 | 1 | 1 | 97 | 6 | 91 | 1.61e-21 | 96.7 |
MS.gene88369.t1 | AT5G46750 | 50.000 | 80 | 40 | 0 | 18 | 97 | 12 | 91 | 1.66e-21 | 96.7 |
MS.gene88369.t1 | AT4G17890 | 48.750 | 80 | 41 | 0 | 18 | 97 | 15 | 94 | 4.70e-21 | 95.1 |
MS.gene88369.t1 | AT4G17890 | 48.750 | 80 | 41 | 0 | 18 | 97 | 15 | 94 | 7.29e-21 | 95.1 |
MS.gene88369.t1 | AT4G32630 | 33.846 | 130 | 76 | 3 | 16 | 138 | 8 | 134 | 1.59e-18 | 89.0 |
MS.gene88369.t1 | AT4G32630 | 33.846 | 130 | 76 | 3 | 16 | 138 | 8 | 134 | 1.62e-18 | 89.0 |
MS.gene88369.t1 | AT4G32630 | 33.846 | 130 | 76 | 3 | 16 | 138 | 8 | 134 | 1.62e-18 | 89.0 |
MS.gene88369.t1 | AT4G32630 | 33.846 | 130 | 76 | 3 | 16 | 138 | 8 | 134 | 1.62e-18 | 89.0 |
MS.gene88369.t1 | AT4G32630 | 33.846 | 130 | 76 | 3 | 16 | 138 | 8 | 134 | 1.62e-18 | 89.0 |
MS.gene88369.t1 | AT4G32630 | 33.846 | 130 | 76 | 3 | 16 | 138 | 8 | 134 | 1.62e-18 | 89.0 |
MS.gene88369.t1 | AT4G05330 | 47.253 | 91 | 40 | 2 | 41 | 123 | 5 | 95 | 6.00e-18 | 84.7 |
MS.gene88369.t1 | AT1G08680 | 28.402 | 169 | 108 | 5 | 8 | 167 | 4 | 168 | 6.53e-17 | 84.0 |
MS.gene88369.t1 | AT1G08680 | 28.402 | 169 | 108 | 5 | 8 | 167 | 4 | 168 | 6.99e-17 | 84.0 |
MS.gene88369.t1 | AT1G08680 | 28.402 | 169 | 108 | 5 | 8 | 167 | 4 | 168 | 7.63e-17 | 84.0 |
MS.gene88369.t1 | AT1G08680 | 28.402 | 169 | 108 | 5 | 8 | 167 | 4 | 168 | 7.64e-17 | 84.0 |
MS.gene88369.t1 | AT1G08680 | 28.402 | 169 | 108 | 5 | 8 | 167 | 4 | 168 | 8.11e-17 | 83.6 |
MS.gene88369.t1 | AT4G13350 | 28.906 | 128 | 81 | 2 | 12 | 132 | 8 | 132 | 2.44e-15 | 79.0 |
MS.gene88369.t1 | AT4G13350 | 28.906 | 128 | 81 | 2 | 12 | 132 | 8 | 132 | 2.44e-15 | 79.0 |
Find 129 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCAGTAGCCGGCCAATTT+TGG | 0.197676 | 2.3:+17415878 | None:intergenic |
CCAATGTTTCTGTCCAAAAT+TGG | 0.244837 | 2.3:-17415891 | MS.gene88369:CDS |
TCCATTTGTTGCAGTTTCTA+TGG | 0.252468 | 2.3:-17415066 | MS.gene88369:intron |
AACGTTGGCCTTTCCGTTCA+TGG | 0.276363 | 2.3:+17420173 | None:intergenic |
AGTAGCGCCCATTGGTGTTC+AGG | 0.303173 | 2.3:-17415842 | MS.gene88369:CDS |
TTCAGGAATACATCGAAGTT+TGG | 0.313410 | 2.3:-17418574 | MS.gene88369:CDS |
GCTACTGGATTCCCGATATC+TGG | 0.326788 | 2.3:-17415865 | MS.gene88369:CDS |
TGTTGCAGTTTCTATGGTAT+AGG | 0.341844 | 2.3:-17415060 | MS.gene88369:intron |
GTTGCAGTTTCTATGGTATA+GGG | 0.342366 | 2.3:-17415059 | MS.gene88369:intron |
GTGTTTGGCGTTAAGCTCTT+TGG | 0.344571 | 2.3:+17420149 | None:intergenic |
ATATGCTGGTGTCATGTTCC+TGG | 0.348459 | 2.3:+17415702 | None:intergenic |
TCAGGAATACATCGAAGTTT+GGG | 0.349680 | 2.3:-17418573 | MS.gene88369:CDS |
TGTTGTTGATGCATTGAAAA+TGG | 0.352663 | 2.3:+17416015 | None:intergenic |
ATCGTACTCCTTTGCTGACT+TGG | 0.356774 | 2.3:+17414960 | None:intergenic |
AGAAGAAACCTTCTTGTGTT+TGG | 0.357242 | 2.3:+17420134 | None:intergenic |
TTTATATGCATGCAGTGTTC+AGG | 0.361700 | 2.3:-17418591 | MS.gene88369:CDS |
AGCAGTAGCACCAGCTGCTT+TGG | 0.362632 | 2.3:+17416750 | None:intergenic |
TTAAATAGATCCTCAATTCC+AGG | 0.367006 | 2.3:+17416260 | None:intergenic |
GTCCAAAATTGGCCGGCTAC+TGG | 0.376198 | 2.3:-17415880 | MS.gene88369:CDS |
GCTTGTTGTTGTGGGGCTAC+TGG | 0.378949 | 2.3:+17416883 | None:intergenic |
ATGGGCGCTACTCCAGATAT+CGG | 0.380252 | 2.3:+17415853 | None:intergenic |
GTTTGGTGGGCCAGTCTTCT+CGG | 0.390698 | 2.3:+17416310 | None:intergenic |
CTACTGCTGATGATATTAAC+TGG | 0.391223 | 2.3:-17416735 | MS.gene88369:CDS |
GTGTGCTGAGGTTGGGTAGC+AGG | 0.392677 | 2.3:+17416919 | None:intergenic |
AAGTTTCAGCTTGTTGTTGT+GGG | 0.394414 | 2.3:+17416875 | None:intergenic |
TGCAAACATCCCTTGTGTTA+AGG | 0.395111 | 2.3:+17414930 | None:intergenic |
GTCTGTAGCATAGTCTACTT+TGG | 0.402825 | 2.3:+17416816 | None:intergenic |
TGAATGAATGCAACTTGCTC+TGG | 0.405598 | 2.3:+17417614 | None:intergenic |
CTTTCTCAGTGTGCTGAGGT+TGG | 0.413347 | 2.3:+17416911 | None:intergenic |
TCTGTTCAATATCCACCATC+TGG | 0.413856 | 2.3:-17415667 | MS.gene88369:CDS |
AACTCTCCCTGAACACCAAT+GGG | 0.414562 | 2.3:+17415835 | None:intergenic |
TCCAGCTCCTCGCAAGGTAC+TGG | 0.416272 | 2.3:-17417072 | MS.gene88369:CDS |
TTTCTCAGTGTGCTGAGGTT+GGG | 0.420180 | 2.3:+17416912 | None:intergenic |
TTCTTAAACTACCAGAGAAT+CGG | 0.422439 | 2.3:-17418852 | MS.gene88369:CDS |
TCAAATATGTAGATACTAGA+AGG | 0.430348 | 2.3:-17418877 | MS.gene88369:intron |
GTAGCAGGAACTGCATTTGA+TGG | 0.432002 | 2.3:+17417107 | None:intergenic |
GTGTCAGCAGCCGAGAAGAC+TGG | 0.433480 | 2.3:-17416320 | MS.gene88369:CDS |
CAGGAACTGCATTTGATGGT+TGG | 0.440758 | 2.3:+17417111 | None:intergenic |
TCAGCACATTCCCGATTCTC+TGG | 0.453000 | 2.3:+17418841 | None:intergenic |
ACGAGAAAGCAAATAGCTAC+TGG | 0.453079 | 2.3:-17417464 | MS.gene88369:CDS |
CTCGGCTGTTGCATGCTTGT+AGG | 0.458538 | 2.3:+17415916 | None:intergenic |
GAGTTTCCTGCCGGATATGC+TGG | 0.468216 | 2.3:+17415688 | None:intergenic |
CTTTGAGCTGTGTCGGTAGC+CGG | 0.468295 | 2.3:+17416847 | None:intergenic |
GGAGTACTCTCAACTGCGTT+TGG | 0.475278 | 2.3:+17416293 | None:intergenic |
TCCTCGCAAGGTACTGGAGC+AGG | 0.479602 | 2.3:-17417066 | MS.gene88369:intron |
TCCAGTACCTTGCGAGGAGC+TGG | 0.481744 | 2.3:+17417071 | None:intergenic |
TTGGAAGTGGTTGACGTCGC+TGG | 0.483654 | 2.3:+17414979 | None:intergenic |
TCTTAAACTACCAGAGAATC+GGG | 0.486903 | 2.3:-17418851 | MS.gene88369:CDS |
AAGACAAGAGATGGGTTTCA+AGG | 0.489668 | 2.3:-17417265 | MS.gene88369:CDS |
GAACATGACACCAGCATATC+CGG | 0.491572 | 2.3:-17415698 | MS.gene88369:CDS |
CTCCTTTGCTGACTTGGAAG+TGG | 0.493235 | 2.3:+17414966 | None:intergenic |
TCTGTAGCATAGTCTACTTT+GGG | 0.494497 | 2.3:+17416817 | None:intergenic |
AAAGGTATGAAGACAAGAGA+TGG | 0.503168 | 2.3:-17417274 | MS.gene88369:intron |
CAACTCTCCCTGAACACCAA+TGG | 0.510285 | 2.3:+17415834 | None:intergenic |
AGATGGGCAAGTGTAAATCT+TGG | 0.512108 | 2.3:-17418618 | MS.gene88369:CDS |
CCATAGACAACATGTTGAAA+AGG | 0.515436 | 2.3:+17416794 | None:intergenic |
GCTGATGATATTAACTGGGC+AGG | 0.515453 | 2.3:-17416730 | MS.gene88369:CDS |
CAGAGGCCTGCAGAAAATAG+TGG | 0.520069 | 2.3:-17417185 | MS.gene88369:CDS |
GTTCTGCAACTCTTGACACT+TGG | 0.520216 | 2.3:-17417640 | MS.gene88369:CDS |
TACTCTCAACTGCGTTTGGT+GGG | 0.520948 | 2.3:+17416297 | None:intergenic |
GTAGCGCCCATTGGTGTTCA+GGG | 0.522193 | 2.3:-17415841 | MS.gene88369:CDS |
AAGAGATGGGTTTCAAGGGA+TGG | 0.525253 | 2.3:-17417260 | MS.gene88369:CDS |
AGATTTACACTTGCCCATCT+CGG | 0.526067 | 2.3:+17418621 | None:intergenic |
TACTATGCAGAGCTCCGAGA+TGG | 0.530220 | 2.3:-17418635 | MS.gene88369:intron |
ATTTGTTTCAGCTGCTGCAG+AGG | 0.531034 | 2.3:-17416342 | MS.gene88369:intron |
GAAGTTTCAGCTTGTTGTTG+TGG | 0.531763 | 2.3:+17416874 | None:intergenic |
GCTTAACGCCAAACACAAGA+AGG | 0.532957 | 2.3:-17420142 | MS.gene88369:intron |
GTACTCTCAACTGCGTTTGG+TGG | 0.533340 | 2.3:+17416296 | None:intergenic |
ACTGTCATCATACCATTGAC+TGG | 0.535539 | 2.3:+17415027 | None:intergenic |
CCTCCACATTACGATAGAGT+TGG | 0.536026 | 2.3:-17417429 | MS.gene88369:CDS |
TGATTCATACCTTCTCAAAG+AGG | 0.537549 | 2.3:+17416165 | None:intergenic |
TGGGCGCTACTCCAGATATC+GGG | 0.537904 | 2.3:+17415854 | None:intergenic |
TCTGTCTGCACCTGGAATTG+AGG | 0.538272 | 2.3:-17416270 | MS.gene88369:CDS |
TTCTATGGTATAGGGCAAGT+TGG | 0.538359 | 2.3:-17415051 | MS.gene88369:CDS |
GAAAATCGCTCCAAAGCAGC+TGG | 0.538743 | 2.3:-17416760 | MS.gene88369:CDS |
GGGCAAGTTGGTCCAGTCAA+TGG | 0.539479 | 2.3:-17415039 | MS.gene88369:CDS |
CGAGAAAGCAAATAGCTACT+GGG | 0.542617 | 2.3:-17417463 | MS.gene88369:CDS |
TGTTTCTGTCCAAAATTGGC+CGG | 0.548823 | 2.3:-17415887 | MS.gene88369:CDS |
GCAGGCCTCTGCTGATGTGA+AGG | 0.549126 | 2.3:+17417197 | None:intergenic |
AGAGATGGGTTTCAAGGGAT+GGG | 0.550790 | 2.3:-17417259 | MS.gene88369:CDS |
GTAGCATAGTCTACTTTGGG+AGG | 0.551215 | 2.3:+17416820 | None:intergenic |
AGTACTCCTCTGTCTGCACC+TGG | 0.551377 | 2.3:-17416278 | MS.gene88369:CDS |
GGAACCCTACGTCTTGTAGC+AGG | 0.553870 | 2.3:+17417092 | None:intergenic |
AGACTGCTGCTGTGCTAGCA+TGG | 0.557012 | 2.3:+17415987 | None:intergenic |
GTTAAGCTCTTTGGTAACGT+TGG | 0.558035 | 2.3:+17420158 | None:intergenic |
TCAACTTTCTCAGTGTGCTG+AGG | 0.560105 | 2.3:+17416907 | None:intergenic |
AGCATAGTCTACTTTGGGAG+GGG | 0.560866 | 2.3:+17416822 | None:intergenic |
AGGGGTACTTTGAGCTGTGT+CGG | 0.564760 | 2.3:+17416840 | None:intergenic |
CTGTTCAATATCCACCATCT+GGG | 0.567420 | 2.3:-17415666 | MS.gene88369:intron |
CCTGCAGAAAATAGTGGACA+TGG | 0.569275 | 2.3:-17417179 | MS.gene88369:CDS |
ACAAGCTGAAACTTCAAAGC+CGG | 0.570226 | 2.3:-17416866 | MS.gene88369:CDS |
AAGGTATGAAGACAAGAGAT+GGG | 0.572848 | 2.3:-17417273 | MS.gene88369:CDS |
ATATCTGGAGTAGCGCCCAT+TGG | 0.574958 | 2.3:-17415850 | MS.gene88369:CDS |
TAGCATAGTCTACTTTGGGA+GGG | 0.578912 | 2.3:+17416821 | None:intergenic |
TGGACAGAAACATTGGGACT+CGG | 0.586094 | 2.3:+17415898 | None:intergenic |
AGAGTTGCAGAATCATATGC+AGG | 0.588172 | 2.3:-17415818 | MS.gene88369:intron |
ACTATGCAGAGCTCCGAGAT+GGG | 0.588842 | 2.3:-17418634 | MS.gene88369:intron |
GTCAATGGTATGATGACAGT+GGG | 0.591988 | 2.3:-17415024 | MS.gene88369:CDS |
TATTGAACAGAGTTTCCTGC+CGG | 0.593808 | 2.3:+17415679 | None:intergenic |
CCTGAAGCAATCACCATGAA+CGG | 0.594840 | 2.3:-17420186 | None:intergenic |
AGACAAGAGATGGGTTTCAA+GGG | 0.594902 | 2.3:-17417264 | MS.gene88369:CDS |
CAGGAATACATCGAAGTTTG+GGG | 0.597859 | 2.3:-17418572 | MS.gene88369:CDS |
TTATCTTCACGCAGTCCAGA+AGG | 0.598442 | 2.3:+17417224 | None:intergenic |
AACCACTTCCAAGTCAGCAA+AGG | 0.599759 | 2.3:-17414968 | MS.gene88369:CDS |
GCTACTGCAGCTAAATCTAC+CGG | 0.599923 | 2.3:-17415955 | MS.gene88369:CDS |
ACAGCAGCAGTCTCTTCTGA+TGG | 0.601067 | 2.3:-17415977 | MS.gene88369:CDS |
TATAATGAGCCTCTTTGAGA+AGG | 0.605527 | 2.3:-17416174 | MS.gene88369:intron |
AAACATCCCTTGTGTTAAGG+AGG | 0.610584 | 2.3:+17414933 | None:intergenic |
AGCAATCACCATGAACGGAA+AGG | 0.610926 | 2.3:-17420181 | None:intergenic |
GATATCGGGAATCCAGTAGC+CGG | 0.612970 | 2.3:+17415868 | None:intergenic |
TAGGGTTCCAGCTCCTCGCA+AGG | 0.614792 | 2.3:-17417078 | MS.gene88369:CDS |
ATGACACCAGCATATCCGGC+AGG | 0.615567 | 2.3:-17415694 | MS.gene88369:CDS |
GACGTCGCTGGAGTTGACTG+AGG | 0.620712 | 2.3:+17414991 | None:intergenic |
AGTTTCAGCTTGTTGTTGTG+GGG | 0.626820 | 2.3:+17416876 | None:intergenic |
AGTTCCTGCTACAAGACGTA+GGG | 0.629500 | 2.3:-17417096 | MS.gene88369:CDS |
ACCTGCTCCAGTACCTTGCG+AGG | 0.629602 | 2.3:+17417065 | None:intergenic |
TACTGCTGATGATATTAACT+GGG | 0.634184 | 2.3:-17416734 | MS.gene88369:CDS |
TGCAGCTAAATCTACCGGTG+TGG | 0.640732 | 2.3:-17415950 | MS.gene88369:CDS |
AGTCCAACTCTATCGTAATG+TGG | 0.641617 | 2.3:+17417426 | None:intergenic |
CTAGTGACATACCCAGATGG+TGG | 0.645472 | 2.3:+17415655 | None:intergenic |
CAGTTCCTGCTACAAGACGT+AGG | 0.647490 | 2.3:-17417097 | MS.gene88369:CDS |
TCAATTCCAGGTGCAGACAG+AGG | 0.665056 | 2.3:+17416272 | None:intergenic |
AATCTCCTTCACATCAGCAG+AGG | 0.669955 | 2.3:-17417202 | MS.gene88369:CDS |
AAAAGTATTCTCAGCAACAG+TGG | 0.676236 | 2.3:+17417151 | None:intergenic |
AGTCAATGGTATGATGACAG+TGG | 0.678318 | 2.3:-17415025 | MS.gene88369:CDS |
TAACTAGTGACATACCCAGA+TGG | 0.685152 | 2.3:+17415652 | None:intergenic |
CCAACTCTATCGTAATGTGG+AGG | 0.685175 | 2.3:+17417429 | None:intergenic |
AGGATACTTGAGATCCACAC+CGG | 0.731794 | 2.3:+17415936 | None:intergenic |
AGGAATACATCGAAGTTTGG+GGG | 0.738285 | 2.3:-17418571 | MS.gene88369:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATAATAATAAATAATCC+TGG | + | chr2.3:17416405-17416424 | None:intergenic | 10.0% |
!!! | ATAAATTCTTTTATTCTTAT+TGG | - | chr2.3:17419029-17419048 | MS.gene88369:intron | 10.0% |
!!! | TATTTTTTTAATATTTCGTT+TGG | - | chr2.3:17416991-17417010 | MS.gene88369:intron | 10.0% |
!! | AAAAGGAAAAATAAATTCTA+TGG | - | chr2.3:17418417-17418436 | MS.gene88369:intron | 15.0% |
!! | CAATTAAAAAAATCATGTAT+CGG | - | chr2.3:17417277-17417296 | MS.gene88369:intron | 15.0% |
!! | CATTAAAAATCTAGATTAAA+GGG | + | chr2.3:17419699-17419718 | None:intergenic | 15.0% |
!! | TATATCCTTAAAAAAGAAAA+AGG | - | chr2.3:17418400-17418419 | MS.gene88369:intron | 15.0% |
!! | TATGTAAAATTAAATCCTAT+GGG | - | chr2.3:17415418-17415437 | MS.gene88369:intron | 15.0% |
!! | TCATTAAAAATCTAGATTAA+AGG | + | chr2.3:17419700-17419719 | None:intergenic | 15.0% |
!! | TCTTAAAAGTTATTCATATT+TGG | - | chr2.3:17415952-17415971 | MS.gene88369:CDS | 15.0% |
!! | TGATATAAACAAGAAATAAA+TGG | - | chr2.3:17416925-17416944 | MS.gene88369:CDS | 15.0% |
!!! | AAATGTTTTCTTAAAGTAAA+CGG | - | chr2.3:17418700-17418719 | MS.gene88369:intron | 15.0% |
!!! | ATTAATCAATTAGGATATTT+TGG | - | chr2.3:17415188-17415207 | MS.gene88369:intron | 15.0% |
!!! | ATTTAGCATCAAAATTTTAA+GGG | + | chr2.3:17416639-17416658 | None:intergenic | 15.0% |
!!! | TATTGAACAATTTTGTTTTT+AGG | - | chr2.3:17416135-17416154 | MS.gene88369:intron | 15.0% |
!!! | TATTTAGCATCAAAATTTTA+AGG | + | chr2.3:17416640-17416659 | None:intergenic | 15.0% |
!!! | TATTTTAGAATTTCTTGTTT+TGG | - | chr2.3:17417586-17417605 | MS.gene88369:intron | 15.0% |
!!! | TTATTTCTTGTTTATATCAA+GGG | + | chr2.3:17416924-17416943 | None:intergenic | 15.0% |
!!! | TTTATTTCTTGTTTATATCA+AGG | + | chr2.3:17416925-17416944 | None:intergenic | 15.0% |
!!! | TTTATTTTGTTTTTGTAACA+AGG | - | chr2.3:17418066-17418085 | MS.gene88369:intron | 15.0% |
!!! | TTTTTCCTTTTTCTTTTTTA+AGG | + | chr2.3:17418408-17418427 | None:intergenic | 15.0% |
!! | AATGTAATTACTTTACTTTC+AGG | - | chr2.3:17417426-17417445 | MS.gene88369:CDS | 20.0% |
!! | ACTAATTATAAAAATGCAAC+TGG | + | chr2.3:17415453-17415472 | None:intergenic | 20.0% |
!! | ATAGTAAAAATTTCACAAGT+GGG | - | chr2.3:17416675-17416694 | MS.gene88369:intron | 20.0% |
!! | ATTACATTAGTATACAATGA+AGG | + | chr2.3:17417414-17417433 | None:intergenic | 20.0% |
!! | ATTCTCTACACTTAATAATT+TGG | - | chr2.3:17416861-17416880 | MS.gene88369:CDS | 20.0% |
!! | CAATTATTGCATATACTTAA+AGG | - | chr2.3:17417800-17417819 | MS.gene88369:intron | 20.0% |
!! | GTATGTAAAATTAAATCCTA+TGG | - | chr2.3:17415417-17415436 | MS.gene88369:intron | 20.0% |
!! | GTTTGAGTAATTGTAAATTT+GGG | - | chr2.3:17415771-17415790 | MS.gene88369:intron | 20.0% |
!! | TATAGTAAAAATTTCACAAG+TGG | - | chr2.3:17416674-17416693 | MS.gene88369:intron | 20.0% |
!! | TATATGCAATAATTGAAATC+AGG | + | chr2.3:17417795-17417814 | None:intergenic | 20.0% |
!! | TGTTTGAGTAATTGTAAATT+TGG | - | chr2.3:17415770-17415789 | MS.gene88369:intron | 20.0% |
!! | TTAGTTTATTCTTTCTTAGT+TGG | - | chr2.3:17415129-17415148 | MS.gene88369:intron | 20.0% |
!!! | ATGTGTCTAGTTTTTTTTTT+AGG | - | chr2.3:17416810-17416829 | MS.gene88369:CDS | 20.0% |
!!! | ATTGTAAATTTGGGATATTA+AGG | - | chr2.3:17415780-17415799 | MS.gene88369:intron | 20.0% |
!!! | CCAAATTTAAAGTACAAAAA+GGG | + | chr2.3:17418101-17418120 | None:intergenic | 20.0% |
!!! | CTATAGAAATCTTTGAAAAT+AGG | - | chr2.3:17418616-17418635 | MS.gene88369:CDS | 20.0% |
!!! | CTATTTTCAAAGATTTCTAT+AGG | + | chr2.3:17418618-17418637 | None:intergenic | 20.0% |
!!! | GAAATATTCATTTTGTAAAC+AGG | - | chr2.3:17418145-17418164 | MS.gene88369:intron | 20.0% |
!!! | TATCATTTTCCTTATTTAAC+AGG | - | chr2.3:17416960-17416979 | MS.gene88369:intron | 20.0% |
!!! | TCCAAATTTAAAGTACAAAA+AGG | + | chr2.3:17418102-17418121 | None:intergenic | 20.0% |
!!! | TCTATTTTTGACAAACATAA+TGG | + | chr2.3:17419675-17419694 | None:intergenic | 20.0% |
!!! | TGAATGATTATTTAGCTTTT+GGG | - | chr2.3:17415573-17415592 | MS.gene88369:intron | 20.0% |
!!! | TGTGTCTAGTTTTTTTTTTA+GGG | - | chr2.3:17416811-17416830 | MS.gene88369:CDS | 20.0% |
!!! | TGTTTTATTGATATTTTGAG+TGG | - | chr2.3:17415906-17415925 | MS.gene88369:CDS | 20.0% |
!!! | TGTTTTCATTTTCAAATGTA+CGG | - | chr2.3:17418556-17418575 | MS.gene88369:intron | 20.0% |
! | AATAATGTGTCTAGTTGAAT+GGG | - | chr2.3:17416835-17416854 | MS.gene88369:CDS | 25.0% |
! | ATATTGTGAAATATCAGTAG+TGG | - | chr2.3:17416600-17416619 | MS.gene88369:intron | 25.0% |
! | ATTATCGAAGAAGAATGAAA+AGG | + | chr2.3:17414992-17415011 | None:intergenic | 25.0% |
! | ATTGTAGTTCTTATGTTGAA+AGG | + | chr2.3:17416097-17416116 | None:intergenic | 25.0% |
! | CAAGCAAATAGATACAAAAT+TGG | - | chr2.3:17416343-17416362 | MS.gene88369:intron | 25.0% |
! | CTACACTTAATAATTTGGAT+AGG | - | chr2.3:17416866-17416885 | MS.gene88369:CDS | 25.0% |
! | CTCATAACATCTTGAAAATA+AGG | + | chr2.3:17415617-17415636 | None:intergenic | 25.0% |
! | TACTCAAACAAACAACTAAA+TGG | + | chr2.3:17415760-17415779 | None:intergenic | 25.0% |
! | TATATGCAATAGATTAGATG+TGG | + | chr2.3:17419964-17419983 | None:intergenic | 25.0% |
! | TCAAATATGTAGATACTAGA+AGG | - | chr2.3:17416215-17416234 | MS.gene88369:CDS | 25.0% |
! | TCTTATGTTGAAAGGATTTA+AGG | + | chr2.3:17416089-17416108 | None:intergenic | 25.0% |
! | TTATCGAAGAAGAATGAAAA+GGG | + | chr2.3:17414991-17415010 | None:intergenic | 25.0% |
! | TTGTATAATATGGTGATTTG+TGG | - | chr2.3:17416701-17416720 | MS.gene88369:intron | 25.0% |
! | TTTATTCTTTCTTAGTTGGT+AGG | - | chr2.3:17415133-17415152 | MS.gene88369:intron | 25.0% |
! | TTTGTTCGGATTAATCAATT+AGG | - | chr2.3:17415179-17415198 | MS.gene88369:intron | 25.0% |
!! | AAAAATCGAAATGATGATGA+TGG | + | chr2.3:17415057-17415076 | None:intergenic | 25.0% |
!! | CAATAACACATAATGTTTTG+TGG | - | chr2.3:17416738-17416757 | MS.gene88369:CDS | 25.0% |
!! | CACTATAAAAACCAACATTT+TGG | + | chr2.3:17417350-17417369 | None:intergenic | 25.0% |
!! | CCCTTTTTGTACTTTAAATT+TGG | - | chr2.3:17418098-17418117 | MS.gene88369:intron | 25.0% |
!! | TTAAGATATTTGTTACTGCA+AGG | + | chr2.3:17416028-17416047 | None:intergenic | 25.0% |
!!! | AAAAACGGTTTAGAATTTTC+TGG | + | chr2.3:17415730-17415749 | None:intergenic | 25.0% |
!!! | ATATATGTTGATGACAAGAA+AGG | - | chr2.3:17415845-17415864 | MS.gene88369:CDS | 25.0% |
!!! | ATTGATATTTTGAGTGGAAA+AGG | - | chr2.3:17415912-17415931 | MS.gene88369:CDS | 25.0% |
!!! | GTGAATGATTATTTAGCTTT+TGG | - | chr2.3:17415572-17415591 | MS.gene88369:intron | 25.0% |
!!! | GTGTCTAGTTTTTTTTTTAG+GGG | - | chr2.3:17416812-17416831 | MS.gene88369:CDS | 25.0% |
!!! | TCATTTTTAACATCTTTCTG+TGG | + | chr2.3:17418898-17418917 | None:intergenic | 25.0% |
AAACCTCCAAAAAGGAAATA+TGG | + | chr2.3:17415530-17415549 | None:intergenic | 30.0% | |
AAAGGAAATATGGGAAACTA+AGG | + | chr2.3:17415520-17415539 | None:intergenic | 30.0% | |
AACCTCCAAAAAGGAAATAT+GGG | + | chr2.3:17415529-17415548 | None:intergenic | 30.0% | |
AAGCTAAGTATGTATTTGTC+TGG | - | chr2.3:17416279-17416298 | MS.gene88369:CDS | 30.0% | |
AAGGAAATATGGGAAACTAA+GGG | + | chr2.3:17415519-17415538 | None:intergenic | 30.0% | |
AAGTGGGCAATTGTATAATA+TGG | - | chr2.3:17416691-17416710 | MS.gene88369:intron | 30.0% | |
CAAAAGTCATTGGAACTTAT+AGG | + | chr2.3:17417386-17417405 | None:intergenic | 30.0% | |
GAATAATGTGTCTAGTTGAA+TGG | - | chr2.3:17416834-17416853 | MS.gene88369:CDS | 30.0% | |
GTATGAATCAATGCTTCAAT+AGG | - | chr2.3:17418940-17418959 | MS.gene88369:intron | 30.0% | |
TAAAAATGTGCATCATGAAG+TGG | - | chr2.3:17415359-17415378 | MS.gene88369:intron | 30.0% | |
TACTGCTGATGATATTAACT+GGG | - | chr2.3:17418358-17418377 | MS.gene88369:intron | 30.0% | |
TATCGAAGAAGAATGAAAAG+GGG | + | chr2.3:17414990-17415009 | None:intergenic | 30.0% | |
TGTTGTTGATGCATTGAAAA+TGG | + | chr2.3:17419080-17419099 | None:intergenic | 30.0% | |
TTAAATAGATCCTCAATTCC+AGG | + | chr2.3:17418835-17418854 | None:intergenic | 30.0% | |
TTCTTAAACTACCAGAGAAT+CGG | - | chr2.3:17416240-17416259 | MS.gene88369:CDS | 30.0% | |
TTTCACATGCCAAAACAAAT+GGG | - | chr2.3:17419590-17419609 | MS.gene88369:intron | 30.0% | |
! | AAAACCAACATTTTGGACTT+AGG | + | chr2.3:17417343-17417362 | None:intergenic | 30.0% |
! | AGCTGATTTCCTGTTAAATA+AGG | + | chr2.3:17416972-17416991 | None:intergenic | 30.0% |
! | AGTTTCCCATATTTCCTTTT+TGG | - | chr2.3:17415521-17415540 | MS.gene88369:intron | 30.0% |
! | ATTTTTCCTCCTTAACACAA+GGG | - | chr2.3:17420153-17420172 | MS.gene88369:CDS | 30.0% |
! | CAAAATTGGTTCTTGAAATG+TGG | - | chr2.3:17416357-17416376 | MS.gene88369:intron | 30.0% |
! | GAAGATGGATTCAGTTTAAT+TGG | - | chr2.3:17415987-17416006 | MS.gene88369:CDS | 30.0% |
! | GTAAATTTGGGATATTAAGG+AGG | - | chr2.3:17415783-17415802 | MS.gene88369:intron | 30.0% |
! | TAGTAGTGTAAGACATTTTC+TGG | + | chr2.3:17419883-17419902 | None:intergenic | 30.0% |
! | TTCTATGCAATGCATTGATA+GGG | - | chr2.3:17415336-17415355 | MS.gene88369:intron | 30.0% |
! | TTTCTATGCAATGCATTGAT+AGG | - | chr2.3:17415335-17415354 | MS.gene88369:intron | 30.0% |
!! | AAGTCATGGATTAGTCATTT+GGG | - | chr2.3:17415675-17415694 | MS.gene88369:CDS | 30.0% |
!! | AATACTTTTCTAGTGATGCA+TGG | - | chr2.3:17415215-17415234 | MS.gene88369:intron | 30.0% |
!! | CTGAGAATACTTTTGAAGAA+AGG | - | chr2.3:17417950-17417969 | MS.gene88369:intron | 30.0% |
!! | GATTTTGTTGTGAAGAACTT+GGG | - | chr2.3:17418507-17418526 | MS.gene88369:intron | 30.0% |
!! | TAAGTCATGGATTAGTCATT+TGG | - | chr2.3:17415674-17415693 | MS.gene88369:CDS | 30.0% |
!! | TGATTTTGTTGTGAAGAACT+TGG | - | chr2.3:17418506-17418525 | MS.gene88369:intron | 30.0% |
!! | TGTTACTCGACATTTTGTTT+TGG | - | chr2.3:17418454-17418473 | MS.gene88369:intron | 30.0% |
!!! | TTTTGGTTCTATTCAGCAAT+GGG | - | chr2.3:17417603-17417622 | MS.gene88369:intron | 30.0% |
AAATGTACGGAATATTGTGC+AGG | - | chr2.3:17418569-17418588 | MS.gene88369:CDS | 35.0% | |
AACAAACAACTAAATGGCCT+TGG | + | chr2.3:17415754-17415773 | None:intergenic | 35.0% | |
AACGTATTCTCAAAGCAAAC+AGG | + | chr2.3:17418533-17418552 | None:intergenic | 35.0% | |
AACTGAATCCATCTTCATGT+AGG | + | chr2.3:17415983-17416002 | None:intergenic | 35.0% | |
AACTGGTATATCTTTCCCAT+AGG | + | chr2.3:17415436-17415455 | None:intergenic | 35.0% | |
AAGGTATGAAGACAAGAGAT+GGG | - | chr2.3:17417819-17417838 | MS.gene88369:intron | 35.0% | |
ACAAACAACTAAATGGCCTT+GGG | + | chr2.3:17415753-17415772 | None:intergenic | 35.0% | |
ACCATAGAAACTGCAACAAA+TGG | + | chr2.3:17420030-17420049 | None:intergenic | 35.0% | |
ACTGAATCCATCTTCATGTA+GGG | + | chr2.3:17415982-17416001 | None:intergenic | 35.0% | |
ACTTATAAACCTCACGAGTT+AGG | + | chr2.3:17415659-17415678 | None:intergenic | 35.0% | |
ACTTTGCCGACAAAAAGTTA+TGG | + | chr2.3:17417232-17417251 | None:intergenic | 35.0% | |
AGAAAGGAAAAAACATTGCG+AGG | - | chr2.3:17415861-17415880 | MS.gene88369:CDS | 35.0% | |
AGAAGAAACCTTCTTGTGTT+TGG | + | chr2.3:17414961-17414980 | None:intergenic | 35.0% | |
ATAGAATTCAGAGTAACCCT+CGG | - | chr2.3:17419543-17419562 | MS.gene88369:intron | 35.0% | |
ATGTATTTGTCTGGATCTGA+AGG | - | chr2.3:17416288-17416307 | MS.gene88369:CDS | 35.0% | |
CCATAATCTGCTAAACTAGT+GGG | + | chr2.3:17419836-17419855 | None:intergenic | 35.0% | |
CCATAGACAACATGTTGAAA+AGG | + | chr2.3:17418301-17418320 | None:intergenic | 35.0% | |
CCTGGAAATGAAAAACACAA+AGG | + | chr2.3:17416387-17416406 | None:intergenic | 35.0% | |
CTACTGCTGATGATATTAAC+TGG | - | chr2.3:17418357-17418376 | MS.gene88369:intron | 35.0% | |
CTATGGTGTTTCACTTTGTT+CGG | - | chr2.3:17415165-17415184 | MS.gene88369:intron | 35.0% | |
CTTTAACTCTGATGAGTACT+AGG | - | chr2.3:17417197-17417216 | MS.gene88369:CDS | 35.0% | |
GAAGGAAAGACAAAAGTCAT+TGG | + | chr2.3:17417396-17417415 | None:intergenic | 35.0% | |
GGATGTTTGCAAAACAATGA+TGG | - | chr2.3:17420174-17420193 | MS.gene88369:CDS | 35.0% | |
GTTGCAGTTTCTATGGTATA+GGG | - | chr2.3:17420033-17420052 | MS.gene88369:intron | 35.0% | |
GTTTAACACAGACATCAAGA+TGG | + | chr2.3:17420001-17420020 | None:intergenic | 35.0% | |
GTTTCACATGCCAAAACAAA+TGG | - | chr2.3:17419589-17419608 | MS.gene88369:intron | 35.0% | |
TACCCAATGTGACATTAAGT+CGG | + | chr2.3:17419478-17419497 | None:intergenic | 35.0% | |
TATGCTGATGTTTATGTGCT+CGG | - | chr2.3:17416767-17416786 | MS.gene88369:CDS | 35.0% | |
TCAGGAATACATCGAAGTTT+GGG | - | chr2.3:17416519-17416538 | MS.gene88369:intron | 35.0% | |
TCCATAATCTGCTAAACTAG+TGG | + | chr2.3:17419837-17419856 | None:intergenic | 35.0% | |
TCTGTAGCATAGTCTACTTT+GGG | + | chr2.3:17418278-17418297 | None:intergenic | 35.0% | |
TCTTAAACTACCAGAGAATC+GGG | - | chr2.3:17416241-17416260 | MS.gene88369:CDS | 35.0% | |
TGATTCATACCTTCTCAAAG+AGG | + | chr2.3:17418930-17418949 | None:intergenic | 35.0% | |
TGCAATAGATTAGATGTGGA+AGG | + | chr2.3:17419960-17419979 | None:intergenic | 35.0% | |
TGTATTTGTCTGGATCTGAA+GGG | - | chr2.3:17416289-17416308 | MS.gene88369:CDS | 35.0% | |
TGTTGCAGTTTCTATGGTAT+AGG | - | chr2.3:17420032-17420051 | MS.gene88369:intron | 35.0% | |
TTCAGGAATACATCGAAGTT+TGG | - | chr2.3:17416518-17416537 | MS.gene88369:intron | 35.0% | |
TTTATATGCATGCAGTGTTC+AGG | - | chr2.3:17416501-17416520 | MS.gene88369:intron | 35.0% | |
TTTATTGCTGACATGAGATC+CGG | + | chr2.3:17416322-17416341 | None:intergenic | 35.0% | |
! | AAAGGTATGAAGACAAGAGA+TGG | - | chr2.3:17417818-17417837 | MS.gene88369:intron | 35.0% |
! | CAAGTAACTCCCATTTGTTT+TGG | + | chr2.3:17419602-17419621 | None:intergenic | 35.0% |
! | CACTGTTGTATTTTCCAACT+AGG | + | chr2.3:17417036-17417055 | None:intergenic | 35.0% |
! | CCTTTGTGTTTTTCATTTCC+AGG | - | chr2.3:17416384-17416403 | MS.gene88369:intron | 35.0% |
! | CCTTTTCAACATGTTGTCTA+TGG | - | chr2.3:17418298-17418317 | MS.gene88369:intron | 35.0% |
! | CTTAAAGTAAACGGACTCTA+AGG | - | chr2.3:17418709-17418728 | MS.gene88369:intron | 35.0% |
! | GATTTTTCCTCCTTAACACA+AGG | - | chr2.3:17420152-17420171 | MS.gene88369:CDS | 35.0% |
! | GGTTTTACTGGAGTTAAACT+TGG | + | chr2.3:17418877-17418896 | None:intergenic | 35.0% |
! | GTTGTATTTTCCAACTAGGT+GGG | + | chr2.3:17417032-17417051 | None:intergenic | 35.0% |
! | TAGTGTAAGACATTTTCTGG+TGG | + | chr2.3:17419880-17419899 | None:intergenic | 35.0% |
! | TATAATGAGCCTCTTTGAGA+AGG | - | chr2.3:17418918-17418937 | MS.gene88369:intron | 35.0% |
! | TCCATTTGTTGCAGTTTCTA+TGG | - | chr2.3:17420026-17420045 | MS.gene88369:intron | 35.0% |
! | TGTTGTATTTTCCAACTAGG+TGG | + | chr2.3:17417033-17417052 | None:intergenic | 35.0% |
! | TTCAATGTAAGTGAGTTGAG+TGG | - | chr2.3:17417497-17417516 | MS.gene88369:intron | 35.0% |
! | TTCCCATATTTCCTTTTTGG+AGG | - | chr2.3:17415524-17415543 | MS.gene88369:intron | 35.0% |
! | TTGTATTTTCCAACTAGGTG+GGG | + | chr2.3:17417031-17417050 | None:intergenic | 35.0% |
! | TTTAGGATTTGCCACATCTT+CGG | - | chr2.3:17416152-17416171 | MS.gene88369:intron | 35.0% |
! | TTTGGGGGTACATATATCAA+AGG | - | chr2.3:17416536-17416555 | MS.gene88369:intron | 35.0% |
!! | AAAAGTATTCTCAGCAACAG+TGG | + | chr2.3:17417944-17417963 | None:intergenic | 35.0% |
!! | AAGTTTCAGCTTGTTGTTGT+GGG | + | chr2.3:17418220-17418239 | None:intergenic | 35.0% |
!! | ACATCTTTCTGTGGTTTTAC+TGG | + | chr2.3:17418889-17418908 | None:intergenic | 35.0% |
!! | ATTCTAAACCGTTTTTCCCA+AGG | - | chr2.3:17415734-17415753 | MS.gene88369:intron | 35.0% |
!! | GTACTGACTTAATTTGACGT+GGG | - | chr2.3:17417299-17417318 | MS.gene88369:intron | 35.0% |
!! | TTGGTAGGTTGATTGATCTA+TGG | - | chr2.3:17415148-17415167 | MS.gene88369:intron | 35.0% |
!!! | GTTTTGGTTCTATTCAGCAA+TGG | - | chr2.3:17417602-17417621 | MS.gene88369:intron | 35.0% |
AAACATCCCTTGTGTTAAGG+AGG | + | chr2.3:17420162-17420181 | None:intergenic | 40.0% | |
AACACAGACATCAAGATGGA+AGG | + | chr2.3:17419997-17420016 | None:intergenic | 40.0% | |
ACAAGCTGAAACTTCAAAGC+CGG | - | chr2.3:17418226-17418245 | MS.gene88369:intron | 40.0% | |
ACATAAGTTAGTTGCTGGAC+TGG | + | chr2.3:17419351-17419370 | None:intergenic | 40.0% | |
ACGAGAAAGCAAATAGCTAC+TGG | - | chr2.3:17417628-17417647 | MS.gene88369:CDS | 40.0% | |
ACGCTGAAAAACCTCCAAAA+AGG | + | chr2.3:17415538-17415557 | None:intergenic | 40.0% | |
ACTGTCATCATACCATTGAC+TGG | + | chr2.3:17420068-17420087 | None:intergenic | 40.0% | |
AGAGTTGCAGAATCATATGC+AGG | - | chr2.3:17419274-17419293 | MS.gene88369:intron | 40.0% | |
AGATGGGCAAGTGTAAATCT+TGG | - | chr2.3:17416474-17416493 | MS.gene88369:intron | 40.0% | |
AGATTTACACTTGCCCATCT+CGG | + | chr2.3:17416474-17416493 | None:intergenic | 40.0% | |
AGGAATACATCGAAGTTTGG+GGG | - | chr2.3:17416521-17416540 | MS.gene88369:intron | 40.0% | |
AGTCAATGGTATGATGACAG+TGG | - | chr2.3:17420067-17420086 | MS.gene88369:intron | 40.0% | |
AGTCCAACTCTATCGTAATG+TGG | + | chr2.3:17417669-17417688 | None:intergenic | 40.0% | |
ATCAATCCCTTCAGCCATAA+CGG | + | chr2.3:17415816-17415835 | None:intergenic | 40.0% | |
ATGGAGCAAATGACAATAGC+AGG | + | chr2.3:17419525-17419544 | None:intergenic | 40.0% | |
ATGTTATGAGTCCACCTTCA+AGG | - | chr2.3:17415627-17415646 | MS.gene88369:intron | 40.0% | |
CAGGAATACATCGAAGTTTG+GGG | - | chr2.3:17416520-17416539 | MS.gene88369:intron | 40.0% | |
CAGTTTAATTGGTTGCGAAC+AGG | - | chr2.3:17415998-17416017 | MS.gene88369:CDS | 40.0% | |
CGAGAAAGCAAATAGCTACT+GGG | - | chr2.3:17417629-17417648 | MS.gene88369:CDS | 40.0% | |
CTCGTGAGGTTTATAAGTCA+TGG | - | chr2.3:17415661-17415680 | MS.gene88369:intron | 40.0% | |
CTGTTCAATATCCACCATCT+GGG | - | chr2.3:17419426-17419445 | MS.gene88369:intron | 40.0% | |
GAGGGTTACTCTGAATTCTA+TGG | + | chr2.3:17419544-17419563 | None:intergenic | 40.0% | |
GCAAGACATAAGTTAGTTGC+TGG | + | chr2.3:17419356-17419375 | None:intergenic | 40.0% | |
GCATCATGAAGTGGTTTGAT+TGG | - | chr2.3:17415368-17415387 | MS.gene88369:intron | 40.0% | |
GTATTTGTCTGGATCTGAAG+GGG | - | chr2.3:17416290-17416309 | MS.gene88369:CDS | 40.0% | |
GTCAATGGTATGATGACAGT+GGG | - | chr2.3:17420068-17420087 | MS.gene88369:intron | 40.0% | |
GTCACATTGGGTAGCTTATT+GGG | - | chr2.3:17419485-17419504 | MS.gene88369:intron | 40.0% | |
GTCTGTAGCATAGTCTACTT+TGG | + | chr2.3:17418279-17418298 | None:intergenic | 40.0% | |
TAACTAGTGACATACCCAGA+TGG | + | chr2.3:17419443-17419462 | None:intergenic | 40.0% | |
TAACTTATGTCTTGCCTCTC+TGG | - | chr2.3:17419361-17419380 | MS.gene88369:intron | 40.0% | |
TATTGAACAGAGTTTCCTGC+CGG | + | chr2.3:17419416-17419435 | None:intergenic | 40.0% | |
TCTGTTCAATATCCACCATC+TGG | - | chr2.3:17419425-17419444 | MS.gene88369:intron | 40.0% | |
TGCAAACATCCCTTGTGTTA+AGG | + | chr2.3:17420165-17420184 | None:intergenic | 40.0% | |
TGTCACATTGGGTAGCTTAT+TGG | - | chr2.3:17419484-17419503 | MS.gene88369:intron | 40.0% | |
TGTTATGAGTCCACCTTCAA+GGG | - | chr2.3:17415628-17415647 | MS.gene88369:intron | 40.0% | |
TTCAGCGTTATTTGGATGCT+CGG | - | chr2.3:17415550-17415569 | MS.gene88369:intron | 40.0% | |
TTCTATGGTATAGGGCAAGT+TGG | - | chr2.3:17420041-17420060 | MS.gene88369:intron | 40.0% | |
! | AAGACAAGAGATGGGTTTCA+AGG | - | chr2.3:17417827-17417846 | MS.gene88369:intron | 40.0% |
! | AAGCCGACTTAATGTCACAT+TGG | - | chr2.3:17419472-17419491 | MS.gene88369:intron | 40.0% |
! | AGACAAGAGATGGGTTTCAA+GGG | - | chr2.3:17417828-17417847 | MS.gene88369:intron | 40.0% |
! | AGCCGACTTAATGTCACATT+GGG | - | chr2.3:17419473-17419492 | MS.gene88369:intron | 40.0% |
! | ATATCAGTAGTGGAGACTCT+TGG | - | chr2.3:17416610-17416629 | MS.gene88369:intron | 40.0% |
! | CCCACTAGTTTAGCAGATTA+TGG | - | chr2.3:17419833-17419852 | MS.gene88369:intron | 40.0% |
! | CTAAATGGCCTTGGGAAAAA+CGG | + | chr2.3:17415745-17415764 | None:intergenic | 40.0% |
! | GCTGCACCATAACTTTTTGT+CGG | - | chr2.3:17417223-17417242 | MS.gene88369:CDS | 40.0% |
! | TAGCATAGTCTACTTTGGGA+GGG | + | chr2.3:17418274-17418293 | None:intergenic | 40.0% |
! | TATCAGTAGTGGAGACTCTT+GGG | - | chr2.3:17416611-17416630 | MS.gene88369:intron | 40.0% |
! | TCGTACCACAAGACTACTTT+TGG | - | chr2.3:17419629-17419648 | MS.gene88369:intron | 40.0% |
! | TGAATGAATGCAACTTGCTC+TGG | + | chr2.3:17417481-17417500 | None:intergenic | 40.0% |
! | TGGTTTTCCCTACATGAAGA+TGG | - | chr2.3:17415972-17415991 | MS.gene88369:CDS | 40.0% |
!! | AGACATTTTCTGGTGGTTTG+TGG | + | chr2.3:17419873-17419892 | None:intergenic | 40.0% |
!! | AGTTTCAGCTTGTTGTTGTG+GGG | + | chr2.3:17418219-17418238 | None:intergenic | 40.0% |
!! | CATGGATTAGTCATTTGGGA+TGG | - | chr2.3:17415679-17415698 | MS.gene88369:CDS | 40.0% |
!! | CGTACCACAAGACTACTTTT+GGG | - | chr2.3:17419630-17419649 | MS.gene88369:intron | 40.0% |
!! | GAAGTTTCAGCTTGTTGTTG+TGG | + | chr2.3:17418221-17418240 | None:intergenic | 40.0% |
!! | GGAGGTTTTTCAGCGTTATT+TGG | - | chr2.3:17415542-17415561 | MS.gene88369:intron | 40.0% |
!! | GGTACTGACTTAATTTGACG+TGG | - | chr2.3:17417298-17417317 | MS.gene88369:intron | 40.0% |
!! | GTACCACAAGACTACTTTTG+GGG | - | chr2.3:17419631-17419650 | MS.gene88369:intron | 40.0% |
!! | GTCGGCAAAGTTTTTCAATG+TGG | - | chr2.3:17417241-17417260 | MS.gene88369:CDS | 40.0% |
!! | GTTAAGCTCTTTGGTAACGT+TGG | + | chr2.3:17414937-17414956 | None:intergenic | 40.0% |
!! | TACCACAAGACTACTTTTGG+GGG | - | chr2.3:17419632-17419651 | MS.gene88369:intron | 40.0% |
!! | TGGTCGTGTTCTTGTTATTG+TGG | - | chr2.3:17417517-17417536 | MS.gene88369:intron | 40.0% |
AAAGACGTAAGCCGAAGAGA+AGG | + | chr2.3:17416182-17416201 | None:intergenic | 45.0% | |
AACCACTTCCAAGTCAGCAA+AGG | - | chr2.3:17420124-17420143 | MS.gene88369:intron | 45.0% | |
AACTCTCCCTGAACACCAAT+GGG | + | chr2.3:17419260-17419279 | None:intergenic | 45.0% | |
AACTCTGATGAGTACTAGGC+TGG | - | chr2.3:17417201-17417220 | MS.gene88369:CDS | 45.0% | |
AAGACGTAAGCCGAAGAGAA+GGG | + | chr2.3:17416181-17416200 | None:intergenic | 45.0% | |
AATCAGGTGCAGAAAGCAAG+AGG | + | chr2.3:17417779-17417798 | None:intergenic | 45.0% | |
AATCTCCTTCACATCAGCAG+AGG | - | chr2.3:17417890-17417909 | MS.gene88369:intron | 45.0% | |
ACGTGGGAATTGCTGAAGTA+TGG | - | chr2.3:17417315-17417334 | MS.gene88369:intron | 45.0% | |
ACTTGTTCCGTTATGGCTGA+AGG | - | chr2.3:17415806-17415825 | MS.gene88369:intron | 45.0% | |
AGGATACTTGAGATCCACAC+CGG | + | chr2.3:17419159-17419178 | None:intergenic | 45.0% | |
AGTTCCTGCTACAAGACGTA+GGG | - | chr2.3:17417996-17418015 | MS.gene88369:intron | 45.0% | |
ATGACAGACATTCCAGACCA+AGG | + | chr2.3:17416582-17416601 | None:intergenic | 45.0% | |
ATTAGCAAACCCCACCTAGT+TGG | - | chr2.3:17417019-17417038 | MS.gene88369:intron | 45.0% | |
ATTAGCACCAATATCAGCCG+AGG | + | chr2.3:17419563-17419582 | None:intergenic | 45.0% | |
ATTTGTTTCAGCTGCTGCAG+AGG | - | chr2.3:17418750-17418769 | MS.gene88369:intron | 45.0% | |
CACTGTCGATCAAGCATAAC+TGG | + | chr2.3:17415258-17415277 | None:intergenic | 45.0% | |
CCAACTCTATCGTAATGTGG+AGG | + | chr2.3:17417666-17417685 | None:intergenic | 45.0% | |
CCTCCACATTACGATAGAGT+TGG | - | chr2.3:17417663-17417682 | MS.gene88369:intron | 45.0% | |
CTTGTTCCGTTATGGCTGAA+GGG | - | chr2.3:17415807-17415826 | MS.gene88369:intron | 45.0% | |
GAACATGACACCAGCATATC+CGG | - | chr2.3:17419394-17419413 | MS.gene88369:intron | 45.0% | |
GCTACTGCAGCTAAATCTAC+CGG | - | chr2.3:17419137-17419156 | MS.gene88369:intron | 45.0% | |
GCTGATGATATTAACTGGGC+AGG | - | chr2.3:17418362-17418381 | MS.gene88369:intron | 45.0% | |
GCTTAACGCCAAACACAAGA+AGG | - | chr2.3:17414950-17414969 | MS.gene88369:CDS | 45.0% | |
GGCTCCTAAGTCCAAAATGT+TGG | - | chr2.3:17417336-17417355 | MS.gene88369:intron | 45.0% | |
GGGAATCCAAAAACACCTTC+TGG | - | chr2.3:17417853-17417872 | MS.gene88369:intron | 45.0% | |
GTAGCAGGAACTGCATTTGA+TGG | + | chr2.3:17417988-17418007 | None:intergenic | 45.0% | |
GTAGCATAGTCTACTTTGGG+AGG | + | chr2.3:17418275-17418294 | None:intergenic | 45.0% | |
GTGAACTGCATAAACACTGC+CGG | + | chr2.3:17417178-17417197 | None:intergenic | 45.0% | |
GTGTTTGGCGTTAAGCTCTT+TGG | + | chr2.3:17414946-17414965 | None:intergenic | 45.0% | |
GTTCTGCAACTCTTGACACT+TGG | - | chr2.3:17417452-17417471 | MS.gene88369:CDS | 45.0% | |
TACTCTCAACTGCGTTTGGT+GGG | + | chr2.3:17418798-17418817 | None:intergenic | 45.0% | |
TCAACTTTCTCAGTGTGCTG+AGG | + | chr2.3:17418188-17418207 | None:intergenic | 45.0% | |
TCTTCGGTTTCCCTTCTCTT+CGG | - | chr2.3:17416168-17416187 | MS.gene88369:intron | 45.0% | |
TGACAGACATTCCAGACCAA+GGG | + | chr2.3:17416581-17416600 | None:intergenic | 45.0% | |
TGCTATGTTCCATTAGCCCT+TGG | - | chr2.3:17416562-17416581 | MS.gene88369:intron | 45.0% | |
TGGACAGAAACATTGGGACT+CGG | + | chr2.3:17419197-17419216 | None:intergenic | 45.0% | |
TTAGCACCAATATCAGCCGA+GGG | + | chr2.3:17419562-17419581 | None:intergenic | 45.0% | |
TTATCTTCACGCAGTCCAGA+AGG | + | chr2.3:17417871-17417890 | None:intergenic | 45.0% | |
TTTCTCAGTGTGCTGAGGTT+GGG | + | chr2.3:17418183-17418202 | None:intergenic | 45.0% | |
! | AAGAGATGGGTTTCAAGGGA+TGG | - | chr2.3:17417832-17417851 | MS.gene88369:intron | 45.0% |
! | AAGGAGGACTTGTTCCGTTA+TGG | - | chr2.3:17415799-17415818 | MS.gene88369:intron | 45.0% |
! | AGAGATGGGTTTCAAGGGAT+GGG | - | chr2.3:17417833-17417852 | MS.gene88369:intron | 45.0% |
! | AGCATAGTCTACTTTGGGAG+GGG | + | chr2.3:17418273-17418292 | None:intergenic | 45.0% |
! | ATCCCCCAAAAGTAGTCTTG+TGG | + | chr2.3:17419637-17419656 | None:intergenic | 45.0% |
! | ATCGTACTCCTTTGCTGACT+TGG | + | chr2.3:17420135-17420154 | None:intergenic | 45.0% |
! | CAGGAACTGCATTTGATGGT+TGG | + | chr2.3:17417984-17418003 | None:intergenic | 45.0% |
! | CCATGTCCACTATTTTCTGC+AGG | + | chr2.3:17417916-17417935 | None:intergenic | 45.0% |
! | GCTGAAGGGATTGATTTCAG+AGG | - | chr2.3:17415821-17415840 | MS.gene88369:CDS | 45.0% |
!! | ATATGCTGGTGTCATGTTCC+TGG | + | chr2.3:17419393-17419412 | None:intergenic | 45.0% |
!! | CCTGCAGAAAATAGTGGACA+TGG | - | chr2.3:17417913-17417932 | MS.gene88369:intron | 45.0% |
!! | TGGTGTTATGAGCATAAGCC+TGG | + | chr2.3:17415710-17415729 | None:intergenic | 45.0% |
ACAGCAGCAGTCTCTTCTGA+TGG | - | chr2.3:17419115-17419134 | MS.gene88369:intron | 50.0% | |
ACTATGCAGAGCTCCGAGAT+GGG | - | chr2.3:17416458-17416477 | MS.gene88369:intron | 50.0% | |
ATGGGCGCTACTCCAGATAT+CGG | + | chr2.3:17419242-17419261 | None:intergenic | 50.0% | |
CAACTCTCCCTGAACACCAA+TGG | + | chr2.3:17419261-17419280 | None:intergenic | 50.0% | |
CAGAGGCCTGCAGAAAATAG+TGG | - | chr2.3:17417907-17417926 | MS.gene88369:intron | 50.0% | |
CAGTTCCTGCTACAAGACGT+AGG | - | chr2.3:17417995-17418014 | MS.gene88369:intron | 50.0% | |
CATTCCAGACCAAGGGCTAA+TGG | + | chr2.3:17416574-17416593 | None:intergenic | 50.0% | |
CTAGTGACATACCCAGATGG+TGG | + | chr2.3:17419440-17419459 | None:intergenic | 50.0% | |
CTTTCTCAGTGTGCTGAGGT+TGG | + | chr2.3:17418184-17418203 | None:intergenic | 50.0% | |
GAAAATCGCTCCAAAGCAGC+TGG | - | chr2.3:17418332-17418351 | MS.gene88369:intron | 50.0% | |
GAGAAGGGAAACCGAAGATG+TGG | + | chr2.3:17416166-17416185 | None:intergenic | 50.0% | |
GAGTAACCCTCGGCTGATAT+TGG | - | chr2.3:17419553-17419572 | MS.gene88369:intron | 50.0% | |
GAGTTAGGTGAGACCCTTGA+AGG | + | chr2.3:17415644-17415663 | None:intergenic | 50.0% | |
GATATCGGGAATCCAGTAGC+CGG | + | chr2.3:17419227-17419246 | None:intergenic | 50.0% | |
GCTACTGGATTCCCGATATC+TGG | - | chr2.3:17419227-17419246 | MS.gene88369:intron | 50.0% | |
GTACTCTCAACTGCGTTTGG+TGG | + | chr2.3:17418799-17418818 | None:intergenic | 50.0% | |
TACTATGCAGAGCTCCGAGA+TGG | - | chr2.3:17416457-17416476 | MS.gene88369:intron | 50.0% | |
TCAATTCCAGGTGCAGACAG+AGG | + | chr2.3:17418823-17418842 | None:intergenic | 50.0% | |
TCAGCACATTCCCGATTCTC+TGG | + | chr2.3:17416254-17416273 | None:intergenic | 50.0% | |
TCTGTCTGCACCTGGAATTG+AGG | - | chr2.3:17418822-17418841 | MS.gene88369:intron | 50.0% | |
TGCAGCTAAATCTACCGGTG+TGG | - | chr2.3:17419142-17419161 | MS.gene88369:intron | 50.0% | |
TGCATAAACACTGCCGGAGT+CGG | + | chr2.3:17417172-17417191 | None:intergenic | 50.0% | |
TGCTGACATGAGATCCGGAT+AGG | + | chr2.3:17416317-17416336 | None:intergenic | 50.0% | |
TGTTCCATTAGCCCTTGGTC+TGG | - | chr2.3:17416567-17416586 | MS.gene88369:intron | 50.0% | |
TTAGGTGAGACCCTTGAAGG+TGG | + | chr2.3:17415641-17415660 | None:intergenic | 50.0% | |
! | ATATCTGGAGTAGCGCCCAT+TGG | - | chr2.3:17419242-17419261 | MS.gene88369:intron | 50.0% |
! | GGAGTACTCTCAACTGCGTT+TGG | + | chr2.3:17418802-17418821 | None:intergenic | 50.0% |
! | TCATTTGGGATGGACTCTCC+AGG | - | chr2.3:17415689-17415708 | MS.gene88369:CDS | 50.0% |
!! | AGGGGTACTTTGAGCTGTGT+CGG | + | chr2.3:17418255-17418274 | None:intergenic | 50.0% |
!! | CTCCTTTGCTGACTTGGAAG+TGG | + | chr2.3:17420129-17420148 | None:intergenic | 50.0% |
!! | TTACTGCGAATCACCGACTC+CGG | - | chr2.3:17417156-17417175 | MS.gene88369:CDS | 50.0% |
!!! | CGCAGTCCAGAAGGTGTTTT+TGG | + | chr2.3:17417862-17417881 | None:intergenic | 50.0% |
AGACTGCTGCTGTGCTAGCA+TGG | + | chr2.3:17419108-17419127 | None:intergenic | 55.0% | |
AGCAGTAGCACCAGCTGCTT+TGG | + | chr2.3:17418345-17418364 | None:intergenic | 55.0% | |
AGGGTCTCACCTAACTCGTG+AGG | - | chr2.3:17415647-17415666 | MS.gene88369:intron | 55.0% | |
AGTACTCCTCTGTCTGCACC+TGG | - | chr2.3:17418814-17418833 | MS.gene88369:intron | 55.0% | |
ATGACACCAGCATATCCGGC+AGG | - | chr2.3:17419398-17419417 | MS.gene88369:intron | 55.0% | |
CTCGGCTGTTGCATGCTTGT+AGG | + | chr2.3:17419179-17419198 | None:intergenic | 55.0% | |
GAGCACATGTGCGTGTGTGT+GGG | + | chr2.3:17419767-17419786 | None:intergenic | 55.0% | |
GAGTTTCCTGCCGGATATGC+TGG | + | chr2.3:17419407-17419426 | None:intergenic | 55.0% | |
GGAACCCTACGTCTTGTAGC+AGG | + | chr2.3:17418003-17418022 | None:intergenic | 55.0% | |
GGATCTGAAGGGGTCCTATC+CGG | - | chr2.3:17416300-17416319 | MS.gene88369:CDS | 55.0% | |
GTTCCTGGTCTGATCCAGAG+AGG | + | chr2.3:17419378-17419397 | None:intergenic | 55.0% | |
TGAGCACATGTGCGTGTGTG+TGG | + | chr2.3:17419768-17419787 | None:intergenic | 55.0% | |
TGGGCGCTACTCCAGATATC+GGG | + | chr2.3:17419241-17419260 | None:intergenic | 55.0% | |
TTGCCTCTCTGGATCAGACC+AGG | - | chr2.3:17419372-17419391 | MS.gene88369:intron | 55.0% | |
TTGGAAGTGGTTGACGTCGC+TGG | + | chr2.3:17420116-17420135 | None:intergenic | 55.0% | |
! | AGTAGCGCCCATTGGTGTTC+AGG | - | chr2.3:17419250-17419269 | MS.gene88369:intron | 55.0% |
! | CTTTGAGCTGTGTCGGTAGC+CGG | + | chr2.3:17418248-17418267 | None:intergenic | 55.0% |
! | GTAGCGCCCATTGGTGTTCA+GGG | - | chr2.3:17419251-17419270 | MS.gene88369:intron | 55.0% |
! | GTTTGGTGGGCCAGTCTTCT+CGG | + | chr2.3:17418785-17418804 | None:intergenic | 55.0% |
!! | GCTTGTTGTTGTGGGGCTAC+TGG | + | chr2.3:17418212-17418231 | None:intergenic | 55.0% |
!! | GGGCAAGTTGGTCCAGTCAA+TGG | - | chr2.3:17420053-17420072 | MS.gene88369:intron | 55.0% |
ACCTGCTCCAGTACCTTGCG+AGG | + | chr2.3:17418030-17418049 | None:intergenic | 60.0% | |
GACGTCGCTGGAGTTGACTG+AGG | + | chr2.3:17420104-17420123 | None:intergenic | 60.0% | |
GCAGGCCTCTGCTGATGTGA+AGG | + | chr2.3:17417898-17417917 | None:intergenic | 60.0% | |
GTGTCAGCAGCCGAGAAGAC+TGG | - | chr2.3:17418772-17418791 | MS.gene88369:intron | 60.0% | |
GTGTGCTGAGGTTGGGTAGC+AGG | + | chr2.3:17418176-17418195 | None:intergenic | 60.0% | |
TAGGGTTCCAGCTCCTCGCA+AGG | - | chr2.3:17418014-17418033 | MS.gene88369:intron | 60.0% | |
TCCAGCTCCTCGCAAGGTAC+TGG | - | chr2.3:17418020-17418039 | MS.gene88369:intron | 60.0% | |
TCCAGTACCTTGCGAGGAGC+TGG | + | chr2.3:17418024-17418043 | None:intergenic | 60.0% | |
! | TTGCTGAGCTGTGCTGCTGC+AGG | - | chr2.3:17417092-17417111 | MS.gene88369:CDS | 60.0% |
!! | TCCTCGCAAGGTACTGGAGC+AGG | - | chr2.3:17418026-17418045 | MS.gene88369:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 17414921 | 17420193 | 17414921 | ID=MS.gene88369 |
chr2.3 | mRNA | 17414921 | 17420193 | 17414921 | ID=MS.gene88369.t1;Parent=MS.gene88369 |
chr2.3 | exon | 17420143 | 17420193 | 17420143 | ID=MS.gene88369.t1.exon1;Parent=MS.gene88369.t1 |
chr2.3 | CDS | 17420143 | 17420193 | 17420143 | ID=cds.MS.gene88369.t1;Parent=MS.gene88369.t1 |
chr2.3 | exon | 17418829 | 17418887 | 17418829 | ID=MS.gene88369.t1.exon2;Parent=MS.gene88369.t1 |
chr2.3 | CDS | 17418829 | 17418887 | 17418829 | ID=cds.MS.gene88369.t1;Parent=MS.gene88369.t1 |
chr2.3 | exon | 17418557 | 17418647 | 17418557 | ID=MS.gene88369.t1.exon3;Parent=MS.gene88369.t1 |
chr2.3 | CDS | 17418557 | 17418647 | 17418557 | ID=cds.MS.gene88369.t1;Parent=MS.gene88369.t1 |
chr2.3 | exon | 17417612 | 17417666 | 17417612 | ID=MS.gene88369.t1.exon4;Parent=MS.gene88369.t1 |
chr2.3 | CDS | 17417612 | 17417666 | 17417612 | ID=cds.MS.gene88369.t1;Parent=MS.gene88369.t1 |
chr2.3 | exon | 17417405 | 17417495 | 17417405 | ID=MS.gene88369.t1.exon5;Parent=MS.gene88369.t1 |
chr2.3 | CDS | 17417405 | 17417495 | 17417405 | ID=cds.MS.gene88369.t1;Parent=MS.gene88369.t1 |
chr2.3 | exon | 17417067 | 17417292 | 17417067 | ID=MS.gene88369.t1.exon6;Parent=MS.gene88369.t1 |
chr2.3 | CDS | 17417067 | 17417292 | 17417067 | ID=cds.MS.gene88369.t1;Parent=MS.gene88369.t1 |
chr2.3 | exon | 17416722 | 17416947 | 17416722 | ID=MS.gene88369.t1.exon7;Parent=MS.gene88369.t1 |
chr2.3 | CDS | 17416722 | 17416947 | 17416722 | ID=cds.MS.gene88369.t1;Parent=MS.gene88369.t1 |
chr2.3 | exon | 17416175 | 17416353 | 17416175 | ID=MS.gene88369.t1.exon8;Parent=MS.gene88369.t1 |
chr2.3 | CDS | 17416175 | 17416353 | 17416175 | ID=cds.MS.gene88369.t1;Parent=MS.gene88369.t1 |
chr2.3 | exon | 17415819 | 17416052 | 17415819 | ID=MS.gene88369.t1.exon9;Parent=MS.gene88369.t1 |
chr2.3 | CDS | 17415819 | 17416052 | 17415819 | ID=cds.MS.gene88369.t1;Parent=MS.gene88369.t1 |
chr2.3 | exon | 17415667 | 17415725 | 17415667 | ID=MS.gene88369.t1.exon10;Parent=MS.gene88369.t1 |
chr2.3 | CDS | 17415667 | 17415725 | 17415667 | ID=cds.MS.gene88369.t1;Parent=MS.gene88369.t1 |
chr2.3 | exon | 17414921 | 17415074 | 17414921 | ID=MS.gene88369.t1.exon11;Parent=MS.gene88369.t1 |
chr2.3 | CDS | 17414921 | 17415074 | 17414921 | ID=cds.MS.gene88369.t1;Parent=MS.gene88369.t1 |
Gene Sequence |
Protein sequence |