Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88652.t1 | XP_003599983.2 | 97.4 | 890 | 22 | 1 | 1 | 890 | 25 | 913 | 0.00E+00 | 1609 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88652.t1 | Q9T041 | 54.8 | 902 | 320 | 21 | 1 | 890 | 39 | 864 | 7.3e-233 | 808.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88652.t1 | G7J1D7 | 97.4 | 890 | 22 | 1 | 1 | 890 | 25 | 913 | 0.0e+00 | 1609.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053348 | MS.gene88652 | 0.815838 | 7.53E-52 | -1.69E-46 |
| MS.gene056228 | MS.gene88652 | 0.825738 | 3.98E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88652.t1 | MTR_3g050060 | 98.315 | 890 | 14 | 1 | 1 | 890 | 25 | 913 | 0.0 | 1800 |
| MS.gene88652.t1 | MTR_3g050060 | 97.114 | 901 | 14 | 2 | 1 | 890 | 25 | 924 | 0.0 | 1791 |
| MS.gene88652.t1 | MTR_6g093150 | 27.200 | 875 | 516 | 26 | 3 | 857 | 12 | 785 | 1.87e-76 | 266 |
| MS.gene88652.t1 | MTR_4g107110 | 31.438 | 299 | 181 | 4 | 4 | 300 | 7 | 283 | 1.11e-41 | 160 |
| MS.gene88652.t1 | MTR_6g093150 | 24.024 | 666 | 403 | 22 | 211 | 857 | 47 | 628 | 2.17e-33 | 137 |
| MS.gene88652.t1 | MTR_5g036950 | 30.063 | 316 | 194 | 7 | 4 | 316 | 22 | 313 | 7.03e-30 | 127 |
| MS.gene88652.t1 | MTR_4g107110 | 26.606 | 218 | 124 | 6 | 443 | 650 | 381 | 572 | 5.64e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88652.t1 | AT4G27060 | 56.368 | 903 | 304 | 24 | 1 | 890 | 39 | 864 | 0.0 | 881 |
| MS.gene88652.t1 | AT1G50890 | 50.167 | 899 | 326 | 16 | 1 | 889 | 34 | 820 | 0.0 | 801 |
| MS.gene88652.t1 | AT2G07170 | 28.737 | 689 | 411 | 19 | 1 | 654 | 24 | 667 | 3.48e-64 | 232 |
| MS.gene88652.t1 | AT1G27210 | 26.841 | 611 | 362 | 14 | 3 | 606 | 34 | 566 | 3.11e-44 | 170 |
| MS.gene88652.t1 | AT1G59850 | 32.566 | 304 | 173 | 7 | 1 | 297 | 19 | 297 | 4.67e-31 | 129 |
| MS.gene88652.t1 | AT5G62580 | 28.477 | 302 | 185 | 7 | 5 | 295 | 7 | 288 | 1.41e-21 | 100 |
| MS.gene88652.t1 | AT5G62580 | 38.017 | 121 | 67 | 4 | 469 | 581 | 400 | 520 | 5.20e-11 | 67.0 |
| MS.gene88652.t1 | AT5G62580 | 28.477 | 302 | 185 | 7 | 5 | 295 | 7 | 288 | 1.41e-21 | 100 |
| MS.gene88652.t1 | AT5G62580 | 38.017 | 121 | 67 | 4 | 469 | 581 | 400 | 520 | 5.20e-11 | 67.0 |
Find 251 sgRNAs with CRISPR-Local
Find 487 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGTAAACCTTTCATTAAA+TGG | 0.169194 | 3.3:-40993096 | None:intergenic |
| TACAATATGAGAAATGATTT+TGG | 0.169530 | 3.3:-40988898 | None:intergenic |
| AGTCCCTTCTTTCAAGGTTT+TGG | 0.187898 | 3.3:-40992311 | None:intergenic |
| TGTTCTTTCGTTTGAATCTT+TGG | 0.207431 | 3.3:-40992421 | None:intergenic |
| CAACAAGTTTCCTCTGTTAT+TGG | 0.223658 | 3.3:-40992712 | None:intergenic |
| TCACCCTCATGCACTGATTT+TGG | 0.232803 | 3.3:-40993273 | None:intergenic |
| CTTGAAAGTTCGTTAATTAC+AGG | 0.235814 | 3.3:-40993645 | None:intergenic |
| GTGGAGGTATTATTTGAAAA+TGG | 0.288123 | 3.3:+40995018 | MS.gene88652:CDS |
| GAGGTGAGGTGAAGCGGAAT+GGG | 0.289577 | 3.3:-40988874 | None:intergenic |
| CATCTAAGTCCCTTCTTTCA+AGG | 0.313274 | 3.3:-40992317 | None:intergenic |
| TGCCATCAGCCAATTCTTAC+TGG | 0.320360 | 3.3:+40993692 | MS.gene88652:CDS |
| AAACACGGATTCAAATTCTA+AGG | 0.324017 | 3.3:+40992197 | MS.gene88652:CDS |
| GATGGTTCTGCCAATATTGC+AGG | 0.325702 | 3.3:+40992651 | MS.gene88652:CDS |
| TTGGAAGCAATTCGGGTTGC+TGG | 0.325884 | 3.3:+40993402 | MS.gene88652:CDS |
| ATTGCTTCAGCAGTCATTTC+AGG | 0.328304 | 3.3:-40993465 | None:intergenic |
| ATCTGACATGCCTGAGGGTT+GGG | 0.330263 | 3.3:+40993167 | MS.gene88652:CDS |
| GAAAATGGCCCCGATACTTT+TGG | 0.330651 | 3.3:+40995033 | MS.gene88652:CDS |
| TATAAGCAGTTTAAGATCAT+TGG | 0.331319 | 3.3:-40988774 | None:intergenic |
| CTCTGAGATGCTAGCCGCTT+TGG | 0.332805 | 3.3:-40992220 | None:intergenic |
| TCGTTTGCTTGTAAAGCTAA+TGG | 0.334341 | 3.3:+40993611 | MS.gene88652:CDS |
| CAAACTGATGGGAATGCTTT+GGG | 0.334628 | 3.3:+40993117 | MS.gene88652:CDS |
| CCAAAGCATTCCCATCAGTT+TGG | 0.334631 | 3.3:-40993116 | None:intergenic |
| GGGATGCAATCTGGACTTCT+TGG | 0.336810 | 3.3:+40993514 | MS.gene88652:CDS |
| CGAGATCTTCGAGTGCGATT+TGG | 0.337723 | 3.3:-40988716 | None:intergenic |
| AACAACTTTACAGGATTTCA+TGG | 0.341994 | 3.3:+40992876 | MS.gene88652:intron |
| GAATATTCCAATTCCAAGTA+TGG | 0.343450 | 3.3:+40993051 | MS.gene88652:CDS |
| AGCTACCTTGGAAGCAATTC+GGG | 0.349041 | 3.3:+40993395 | MS.gene88652:CDS |
| ACCTCTTCCATACTTGGAAT+TGG | 0.356217 | 3.3:-40993058 | None:intergenic |
| AGGTGAGGTGAAGCGGAATG+GGG | 0.360137 | 3.3:-40988873 | None:intergenic |
| ATGGGAGCAATGTGAGTAAT+GGG | 0.376319 | 3.3:+40989012 | MS.gene88652:CDS |
| GGGTAAACCTTTCATTAAAT+GGG | 0.377322 | 3.3:-40993095 | None:intergenic |
| CTGTTTGTCTTGGATTCAAC+AGG | 0.377615 | 3.3:+40993734 | MS.gene88652:CDS |
| AAGCCCTTCTTGAGGAAATC+TGG | 0.378285 | 3.3:-40993221 | None:intergenic |
| CCAAACTGATGGGAATGCTT+TGG | 0.381537 | 3.3:+40993116 | MS.gene88652:CDS |
| ATTTCCTCAAGAAGGGCTTT+TGG | 0.382043 | 3.3:+40993225 | MS.gene88652:CDS |
| TCTACAACAGCATGACAAAT+AGG | 0.382878 | 3.3:+40995185 | MS.gene88652:CDS |
| AATGGGAGTGGTTCTTTGGT+TGG | 0.384409 | 3.3:+40989029 | MS.gene88652:CDS |
| TTTGGTGGTAGTTCTGTTGA+TGG | 0.385894 | 3.3:+40993243 | MS.gene88652:CDS |
| AAGCTACCTTGGAAGCAATT+CGG | 0.386766 | 3.3:+40993394 | MS.gene88652:CDS |
| GACAAGAGAGGGATGCAATC+TGG | 0.389621 | 3.3:+40993505 | MS.gene88652:CDS |
| TACCTCAGAGGAGAGAATAA+TGG | 0.390890 | 3.3:+40988993 | MS.gene88652:CDS |
| CAAAGCATTCCCATCAGTTT+GGG | 0.392101 | 3.3:-40993115 | None:intergenic |
| CGGTGGTGCGGCGGTGGTGC+CGG | 0.393562 | 3.3:+40989166 | MS.gene88652:CDS |
| TGAATCCGTGTTTGAAGAAC+TGG | 0.393570 | 3.3:-40992187 | None:intergenic |
| GGTGAGGTGAAGCGGAATGG+GGG | 0.396956 | 3.3:-40988872 | None:intergenic |
| CGGCCTTCTAGCAAGTATAA+TGG | 0.397102 | 3.3:+40993021 | MS.gene88652:CDS |
| TGTTTAATATCTGTTTGTCT+TGG | 0.399936 | 3.3:+40993724 | MS.gene88652:CDS |
| ATCACCACCTCTTCCATACT+TGG | 0.407097 | 3.3:-40993064 | None:intergenic |
| AGAGGGCGGTGGTGCGGCGG+TGG | 0.410631 | 3.3:+40989160 | MS.gene88652:CDS |
| ACCTCAGAGGAGAGAATAAT+GGG | 0.410974 | 3.3:+40988994 | MS.gene88652:CDS |
| AAACCATTATACTTGCTAGA+AGG | 0.411374 | 3.3:-40993024 | None:intergenic |
| CGAGCTGTGTTAACTGTCTC+TGG | 0.412039 | 3.3:-40992740 | None:intergenic |
| GAGTAATGGGAGTGGTTCTT+TGG | 0.412286 | 3.3:+40989025 | MS.gene88652:CDS |
| TGTGGTATCTGCATTGTCTC+AGG | 0.419488 | 3.3:+40989271 | MS.gene88652:CDS |
| GACATTACTTGAGGCTTGTC+GGG | 0.420081 | 3.3:+40991376 | MS.gene88652:CDS |
| GAGATCTTCCTTCACTTCCA+TGG | 0.420266 | 3.3:-40995061 | None:intergenic |
| AGCGGTTTGTATGGCGAAAA+TGG | 0.420727 | 3.3:+40989115 | MS.gene88652:CDS |
| ATGCCCATCCGGCTTGGTGA+GGG | 0.422057 | 3.3:+40993333 | MS.gene88652:CDS |
| ATGGGAATGCTTTGGGGATG+AGG | 0.424088 | 3.3:+40993124 | MS.gene88652:CDS |
| GGATCAGTCTTCCTCTCATC+AGG | 0.425288 | 3.3:-40992144 | None:intergenic |
| AACAGATACAGCAGAGGGCT+GGG | 0.427775 | 3.3:+40995107 | MS.gene88652:CDS |
| AGTCCTGCTCCAGTAAGAAT+TGG | 0.430985 | 3.3:-40993701 | None:intergenic |
| ATGGGAACGCCAAAAGTATC+GGG | 0.431616 | 3.3:-40995042 | None:intergenic |
| GGAGGTGAGGTGAAGCGGAA+TGG | 0.433612 | 3.3:-40988875 | None:intergenic |
| GGCAGAGGCATTAATTTCCT+TGG | 0.436188 | 3.3:+40991307 | MS.gene88652:CDS |
| GGGTATGGTGCTTCTAGAAA+TGG | 0.437107 | 3.3:+40993198 | MS.gene88652:CDS |
| ACTGCCTCTCTAGCAGTGAT+TGG | 0.437691 | 3.3:+40991267 | MS.gene88652:CDS |
| GGCCCTCTGCAAGAAGTGTT+TGG | 0.439704 | 3.3:+40993355 | MS.gene88652:CDS |
| AATCTATATCACCTGCTTGA+AGG | 0.442326 | 3.3:-40993554 | None:intergenic |
| CAACAGATACAGCAGAGGGC+TGG | 0.443613 | 3.3:+40995106 | MS.gene88652:CDS |
| CAAGATTTATCTATATCATC+TGG | 0.444238 | 3.3:+40992973 | MS.gene88652:CDS |
| AGCAGACGAAGGATAACAAC+CGG | 0.448074 | 3.3:-40988842 | None:intergenic |
| TATTGCAGTTGGCATCAGGC+TGG | 0.449399 | 3.3:+40995154 | MS.gene88652:CDS |
| AGAAAGCAGCAATGCCCATC+CGG | 0.458914 | 3.3:+40993322 | MS.gene88652:CDS |
| TCAGTGCATGAGGGTGATCA+AGG | 0.459160 | 3.3:+40993279 | MS.gene88652:CDS |
| GTTTCCTCTGTTATTGGAGA+AGG | 0.459457 | 3.3:-40992706 | None:intergenic |
| GATCCATGGAAGCCATCATT+AGG | 0.463808 | 3.3:-40992462 | None:intergenic |
| TGACATTACTTGAGGCTTGT+CGG | 0.465399 | 3.3:+40991375 | MS.gene88652:CDS |
| GGAACAGAATAAGGCTGTGC+AGG | 0.465615 | 3.3:+40989085 | MS.gene88652:CDS |
| GTTTGTGAAGCCGTTGTTTG+AGG | 0.465677 | 3.3:+40989055 | MS.gene88652:CDS |
| TCATTTCTCATATTGTAAAA+CGG | 0.465799 | 3.3:+40988904 | MS.gene88652:CDS |
| GGCAATTGCACCACAAAGCT+TGG | 0.465892 | 3.3:+40991220 | MS.gene88652:CDS |
| GGGTGGTGCAGCGGTTTGTA+TGG | 0.467207 | 3.3:+40989106 | MS.gene88652:CDS |
| TTGCTTCAGCAGTCATTTCA+GGG | 0.471668 | 3.3:-40993464 | None:intergenic |
| GATTCAAAGCCATTGTCATC+TGG | 0.472394 | 3.3:+40991977 | MS.gene88652:CDS |
| TGTTTGAGCTTGAAGAATTG+AGG | 0.477015 | 3.3:-40992374 | None:intergenic |
| AACTGCAATAAAAGTTGATC+TGG | 0.479996 | 3.3:-40995141 | None:intergenic |
| AAGATCATTGGAATAGCGTC+TGG | 0.482444 | 3.3:-40988762 | None:intergenic |
| TGGGAATGCTTTGGGGATGA+GGG | 0.483753 | 3.3:+40993125 | MS.gene88652:CDS |
| AGATGATTTACCAGTGGAAG+TGG | 0.485279 | 3.3:+40992335 | MS.gene88652:CDS |
| TTAATCAATTTACAGATCCT+AGG | 0.488939 | 3.3:-40989212 | None:intergenic |
| GCTTTGGGGATGAGGGGAAG+AGG | 0.489491 | 3.3:+40993132 | MS.gene88652:CDS |
| AGCAAATTGTCCAAGCTTTG+TGG | 0.496101 | 3.3:-40991230 | None:intergenic |
| TGAGGGGAAGAGGGCCATCA+TGG | 0.496177 | 3.3:+40993142 | MS.gene88652:CDS |
| CATGGGAACGCCAAAAGTAT+CGG | 0.496207 | 3.3:-40995043 | None:intergenic |
| TTTGCAGAGGTGTTGAGTAC+CGG | 0.496406 | 3.3:+40993582 | MS.gene88652:CDS |
| TCTGTCAATAATAAATATCA+TGG | 0.496589 | 3.3:+40992483 | MS.gene88652:CDS |
| TTTCCAAAACCTTGAAAGAA+GGG | 0.496623 | 3.3:+40992308 | MS.gene88652:CDS |
| AATGGGAGCAATGTGAGTAA+TGG | 0.498624 | 3.3:+40989011 | MS.gene88652:CDS |
| GTAAAGCTAATGGATAGAAC+TGG | 0.499001 | 3.3:+40993621 | MS.gene88652:CDS |
| GACGCATCCCATTTAATGAA+AGG | 0.502777 | 3.3:+40993088 | MS.gene88652:CDS |
| AGATCTTCCTTCACTTCCAT+GGG | 0.503026 | 3.3:-40995060 | None:intergenic |
| GTGCCTAATGATGGCTTCCA+TGG | 0.503449 | 3.3:+40992459 | MS.gene88652:CDS |
| GGCCCCTCACCAAGCCGGAT+GGG | 0.505667 | 3.3:-40993336 | None:intergenic |
| CAGCCAATTCTTACTGGAGC+AGG | 0.506497 | 3.3:+40993698 | MS.gene88652:CDS |
| AAGCCGTTGTTTGAGGCGAT+GGG | 0.507165 | 3.3:+40989062 | MS.gene88652:CDS |
| AACACAGCTCGAAAGACAAC+AGG | 0.508350 | 3.3:+40992752 | MS.gene88652:CDS |
| TTCTAAAGATGAAGCTACCT+TGG | 0.509264 | 3.3:+40993383 | MS.gene88652:CDS |
| GCTGCTGTGGAAGAGGGCGG+TGG | 0.510254 | 3.3:+40989149 | MS.gene88652:CDS |
| TCTGTCATGCTATCCCTCAC+AGG | 0.513493 | 3.3:-40991902 | None:intergenic |
| AGTACTTTATCATTTAAGAC+AGG | 0.514596 | 3.3:-40992273 | None:intergenic |
| ATTGCAGTTGGCATCAGGCT+GGG | 0.514661 | 3.3:+40995155 | MS.gene88652:CDS |
| AATGCCCATCCGGCTTGGTG+AGG | 0.515295 | 3.3:+40993332 | MS.gene88652:CDS |
| ATCATCTGGCCGTAGATTCG+AGG | 0.515601 | 3.3:+40992987 | MS.gene88652:CDS |
| AACACGTAAAGCAGCGGCAG+AGG | 0.515907 | 3.3:+40991292 | MS.gene88652:CDS |
| TGCCCATCCGGCTTGGTGAG+GGG | 0.520414 | 3.3:+40993334 | MS.gene88652:CDS |
| CTGCCTCTCTAGCAGTGATT+GGG | 0.521198 | 3.3:+40991268 | MS.gene88652:CDS |
| ATCTATATCACCTGCTTGAA+GGG | 0.523713 | 3.3:-40993553 | None:intergenic |
| CGAGGAACAACCACTTCCAC+TGG | 0.526232 | 3.3:-40992345 | None:intergenic |
| ACGACACGCGTCACGAGAAG+CGG | 0.526258 | 3.3:-40988943 | None:intergenic |
| GGAGGGTTTAGGGTCGGAAA+CGG | 0.526425 | 3.3:-40988802 | None:intergenic |
| CGGATGATCCCTCGAATCTA+CGG | 0.526798 | 3.3:-40992996 | None:intergenic |
| TTTGGGGAGGTGAGGTGAAG+CGG | 0.527956 | 3.3:-40988880 | None:intergenic |
| CAGAGGGCCCCTCACCAAGC+CGG | 0.528455 | 3.3:-40993341 | None:intergenic |
| CGTTTCAGAAGATGTGTCCT+AGG | 0.529106 | 3.3:+40989195 | MS.gene88652:CDS |
| GTTGATAAATCCTTCACTGA+TGG | 0.530485 | 3.3:-40992165 | None:intergenic |
| GAAGCCGTTGTTTGAGGCGA+TGG | 0.531406 | 3.3:+40989061 | MS.gene88652:CDS |
| GAAAGGTTTACCCAAACTGA+TGG | 0.532245 | 3.3:+40993105 | MS.gene88652:CDS |
| GGCTGTGCAGGGTGGTGCAG+CGG | 0.532573 | 3.3:+40989097 | MS.gene88652:CDS |
| CAATAACAGAGGAAACTTGT+TGG | 0.533589 | 3.3:+40992713 | MS.gene88652:CDS |
| GCAGCAATGCCCATCCGGCT+TGG | 0.533907 | 3.3:+40993327 | MS.gene88652:CDS |
| GGGCCCCTCACCAAGCCGGA+TGG | 0.534110 | 3.3:-40993337 | None:intergenic |
| CGTAGATTCGAGGGATCATC+CGG | 0.536072 | 3.3:+40992997 | MS.gene88652:CDS |
| GAATTATGAAGACTTTGCTC+AGG | 0.536540 | 3.3:+40992542 | MS.gene88652:CDS |
| TTTCCTCTGTTATTGGAGAA+GGG | 0.537325 | 3.3:-40992705 | None:intergenic |
| GGAAGAGGGCGGTGGTGCGG+CGG | 0.537767 | 3.3:+40989157 | MS.gene88652:CDS |
| GGTTTAGAGAGAGGTAATGA+TGG | 0.539435 | 3.3:+40992504 | MS.gene88652:CDS |
| CGGGTTGCTGGCGAAGACAA+TGG | 0.540016 | 3.3:+40993414 | MS.gene88652:CDS |
| ACTGGAAATGTGCCTAATGA+TGG | 0.540300 | 3.3:+40992450 | MS.gene88652:CDS |
| TCCAATTCCAAGTATGGAAG+AGG | 0.543705 | 3.3:+40993057 | MS.gene88652:CDS |
| ATGACGGCTGCTGTGGAAGA+GGG | 0.543870 | 3.3:+40989143 | MS.gene88652:CDS |
| TGTGGAAGAGGGCGGTGGTG+CGG | 0.544649 | 3.3:+40989154 | MS.gene88652:CDS |
| ATCTTCTGAAACGCACCGAC+CGG | 0.546061 | 3.3:-40989185 | None:intergenic |
| TACAAGCAAACGATCATCTC+CGG | 0.548029 | 3.3:-40993601 | None:intergenic |
| GATCTGACATGCCTGAGGGT+TGG | 0.548576 | 3.3:+40993166 | MS.gene88652:CDS |
| ACAACTTTACAGGATTTCAT+GGG | 0.549210 | 3.3:+40992877 | MS.gene88652:intron |
| AAATTTGCAGGGAAAGGAGA+TGG | 0.550662 | 3.3:+40991944 | MS.gene88652:CDS |
| GGTGCGGCGGTGGTGCCGGT+CGG | 0.551013 | 3.3:+40989170 | MS.gene88652:CDS |
| ATTTATTATTGACAGATCCA+TGG | 0.551274 | 3.3:-40992476 | None:intergenic |
| GGGAATGCTTTGGGGATGAG+GGG | 0.554035 | 3.3:+40993126 | MS.gene88652:CDS |
| AAATATCATGGTTTAGAGAG+AGG | 0.554791 | 3.3:+40992495 | MS.gene88652:CDS |
| TGCCAAACACTTCTTGCAGA+GGG | 0.554809 | 3.3:-40993357 | None:intergenic |
| AATGACGGCTGCTGTGGAAG+AGG | 0.555451 | 3.3:+40989142 | MS.gene88652:CDS |
| AGCGGCTAGCATCTCAGAGA+AGG | 0.557871 | 3.3:+40992224 | MS.gene88652:CDS |
| AACGAAAGAACAAATGCCAC+TGG | 0.558420 | 3.3:+40992432 | MS.gene88652:CDS |
| TCATCTGATGAACATGCTGC+AGG | 0.558524 | 3.3:+40992776 | MS.gene88652:CDS |
| CTTTGGGGATGAGGGGAAGA+GGG | 0.560490 | 3.3:+40993133 | MS.gene88652:CDS |
| GCATTCGATGCCCTTCAAGC+AGG | 0.562959 | 3.3:+40993543 | MS.gene88652:CDS |
| GACGCGTGTCGTGATTCGAT+TGG | 0.563587 | 3.3:+40988954 | MS.gene88652:CDS |
| AAACAATGACGAAGAGTCAA+AGG | 0.563879 | 3.3:+40992392 | MS.gene88652:CDS |
| CCAGGAAAATCCCAACCCTC+AGG | 0.564933 | 3.3:-40993177 | None:intergenic |
| TGGAATAGCGTCTGGTGTGA+GGG | 0.566042 | 3.3:-40988754 | None:intergenic |
| ATGGCCAGATTTCCTCAAGA+AGG | 0.566567 | 3.3:+40993217 | MS.gene88652:CDS |
| TTGGAATAGCGTCTGGTGTG+AGG | 0.567129 | 3.3:-40988755 | None:intergenic |
| ATCAACCAGTTCTTCAAACA+CGG | 0.567185 | 3.3:+40992182 | MS.gene88652:CDS |
| TGGCCAGATTTCCTCAAGAA+GGG | 0.567764 | 3.3:+40993218 | MS.gene88652:CDS |
| TTTGATGGAGGGTTTAGGGT+CGG | 0.568865 | 3.3:-40988808 | None:intergenic |
| GCCGTTGTTTGAGGCGATGG+GGG | 0.568974 | 3.3:+40989064 | MS.gene88652:CDS |
| TGCAATAAAAGTTGATCTGG+TGG | 0.569536 | 3.3:-40995138 | None:intergenic |
| GCCTCAAGTAATGTCACTGT+GGG | 0.571336 | 3.3:-40991368 | None:intergenic |
| AAGTATGGAAGAGGTGGTGA+TGG | 0.571431 | 3.3:+40993066 | MS.gene88652:CDS |
| TGAAATGACTGCTGAAGCAA+TGG | 0.573354 | 3.3:+40993467 | MS.gene88652:CDS |
| TGGCGTTCCCATGGAAGTGA+AGG | 0.573985 | 3.3:+40995053 | MS.gene88652:CDS |
| ACTTTACAGGATTTCATGGG+TGG | 0.576754 | 3.3:+40992880 | MS.gene88652:intron |
| CAGGTCTGAAAATGATCAGA+GGG | 0.576886 | 3.3:+40992629 | MS.gene88652:CDS |
| CAGTGCATGAGGGTGATCAA+GGG | 0.578198 | 3.3:+40993280 | MS.gene88652:CDS |
| CTCCAGTAAGAATTGGCTGA+TGG | 0.580708 | 3.3:-40993694 | None:intergenic |
| GTCGGAGAGTTTAGAGAGGG+AGG | 0.582423 | 3.3:-40988682 | None:intergenic |
| AAAGGTTTACCCAAACTGAT+GGG | 0.583083 | 3.3:+40993106 | MS.gene88652:CDS |
| GGTGGAAATGACGGCTGCTG+TGG | 0.583290 | 3.3:+40989136 | MS.gene88652:CDS |
| GAACAGAATAAGGCTGTGCA+GGG | 0.583765 | 3.3:+40989086 | MS.gene88652:CDS |
| ATCACCAAAATCAGTGCATG+AGG | 0.583798 | 3.3:+40993269 | MS.gene88652:CDS |
| TCATCTGGCCGTAGATTCGA+GGG | 0.585500 | 3.3:+40992988 | MS.gene88652:CDS |
| ACTTTATCATTTAAGACAGG+TGG | 0.589099 | 3.3:-40992270 | None:intergenic |
| GGCATGTCAGATCTCCATGA+TGG | 0.590802 | 3.3:-40993156 | None:intergenic |
| GGCGAAAATGGTGGAAATGA+CGG | 0.592605 | 3.3:+40989127 | MS.gene88652:CDS |
| TCCCATTATTCTCTCCTCTG+AGG | 0.593700 | 3.3:-40988995 | None:intergenic |
| TGAGGCTTGTCGGGTTGACA+AGG | 0.594149 | 3.3:+40991385 | MS.gene88652:CDS |
| AGCAACCCGAATTGCTTCCA+AGG | 0.594619 | 3.3:-40993400 | None:intergenic |
| AAGCTAACGATACAATTGAC+AGG | 0.594959 | 3.3:+40992610 | MS.gene88652:CDS |
| GATACAGCAGAGGGCTGGGA+AGG | 0.596715 | 3.3:+40995111 | MS.gene88652:CDS |
| ACAGAGTACGAGGTCTTGAG+AGG | 0.605910 | 3.3:+40992932 | MS.gene88652:CDS |
| ATACTTGCTAGAAGGCCGAC+CGG | 0.605980 | 3.3:-40993016 | None:intergenic |
| TTGCCCAATCACTGCTAGAG+AGG | 0.606495 | 3.3:-40991271 | None:intergenic |
| ATTGCAGATAAGACCTGTGA+GGG | 0.607487 | 3.3:+40991889 | MS.gene88652:intron |
| TTGAAAGTTCGTTAATTACA+GGG | 0.608582 | 3.3:-40993644 | None:intergenic |
| TTGCCAAACACTTCTTGCAG+AGG | 0.610645 | 3.3:-40993358 | None:intergenic |
| CTGTGTTAACTGTCTCTGGA+TGG | 0.611596 | 3.3:-40992736 | None:intergenic |
| GAAGACTGATCCATCAGTGA+AGG | 0.612627 | 3.3:+40992155 | MS.gene88652:CDS |
| ATCATTAGGCACATTTCCAG+TGG | 0.612837 | 3.3:-40992448 | None:intergenic |
| ATGACAGTGCTGGACAAGAG+AGG | 0.613076 | 3.3:+40993493 | MS.gene88652:CDS |
| TCATAATGTTCAGTTGGTGG+AGG | 0.616121 | 3.3:+40995002 | MS.gene88652:intron |
| ATGATGGAAATTCAAGACAA+AGG | 0.621293 | 3.3:+40992520 | MS.gene88652:CDS |
| GATTTGGTGTGTGTCGCGGT+CGG | 0.621527 | 3.3:-40988700 | None:intergenic |
| ACGGCTGCTGTGGAAGAGGG+CGG | 0.624455 | 3.3:+40989146 | MS.gene88652:CDS |
| TTCAAATTCTAAGGCCAAAG+CGG | 0.624510 | 3.3:+40992206 | MS.gene88652:CDS |
| AAAATGTAAATCCTGATGAG+AGG | 0.625162 | 3.3:+40992133 | MS.gene88652:CDS |
| GGTACTCAACACCTCTGCAA+AGG | 0.627640 | 3.3:-40993580 | None:intergenic |
| AGTGCATGAGGGTGATCAAG+GGG | 0.628446 | 3.3:+40993281 | MS.gene88652:CDS |
| AGCCGTTGTTTGAGGCGATG+GGG | 0.629180 | 3.3:+40989063 | MS.gene88652:CDS |
| ACTGCTTGAATGCAAAGCCA+AGG | 0.630558 | 3.3:-40991324 | None:intergenic |
| AATTCCAAGTATGGAAGAGG+TGG | 0.631944 | 3.3:+40993060 | MS.gene88652:CDS |
| TCTGAAAATGATCAGAGGGA+TGG | 0.633350 | 3.3:+40992633 | MS.gene88652:CDS |
| ATGGAGATCTGACATGCCTG+AGG | 0.635807 | 3.3:+40993161 | MS.gene88652:CDS |
| TTTCTAGAAGCACCATACCC+AGG | 0.635816 | 3.3:-40993195 | None:intergenic |
| ACAGGTCTGAAAATGATCAG+AGG | 0.638879 | 3.3:+40992628 | MS.gene88652:CDS |
| CGCTTCAACAGATACAGCAG+AGG | 0.639129 | 3.3:+40995101 | MS.gene88652:CDS |
| GCCCACAGTGACATTACTTG+AGG | 0.643788 | 3.3:+40991367 | MS.gene88652:CDS |
| CGCGGTCGGAGAGTTTAGAG+AGG | 0.644599 | 3.3:-40988686 | None:intergenic |
| GAAGAATTGAGGCATTTGCG+AGG | 0.645671 | 3.3:-40992363 | None:intergenic |
| GCAATGGCTGATGACAGTGC+TGG | 0.648208 | 3.3:+40993483 | MS.gene88652:CDS |
| TGAGACAATGCAGATACCAC+AGG | 0.648682 | 3.3:-40989269 | None:intergenic |
| ATTGCTGCTCTTTACCTCAG+AGG | 0.650571 | 3.3:+40988981 | MS.gene88652:CDS |
| TGACAGAGGCATTAGACCTG+TGG | 0.654793 | 3.3:+40991918 | MS.gene88652:CDS |
| AAGTGAAGGAAGATCTCTTG+CGG | 0.657211 | 3.3:+40995067 | MS.gene88652:CDS |
| AAACTGATGGGAATGCTTTG+GGG | 0.657970 | 3.3:+40993118 | MS.gene88652:CDS |
| GGGTGGATCTCATGATAGCA+TGG | 0.661874 | 3.3:+40992897 | MS.gene88652:CDS |
| GGACTTAGATGATTTACCAG+TGG | 0.662424 | 3.3:+40992329 | MS.gene88652:CDS |
| CAGAATAAGGCTGTGCAGGG+TGG | 0.663665 | 3.3:+40989089 | MS.gene88652:CDS |
| TATAGATTCAGCCTTTGCAG+AGG | 0.664298 | 3.3:+40993569 | MS.gene88652:CDS |
| TCACCAAAATCAGTGCATGA+GGG | 0.665562 | 3.3:+40993270 | MS.gene88652:CDS |
| ATGTTCTTACCAGATGACAA+TGG | 0.665770 | 3.3:-40991986 | None:intergenic |
| TGACAGTGCTGGACAAGAGA+GGG | 0.668635 | 3.3:+40993494 | MS.gene88652:CDS |
| GTGCGATTTGGTGTGTGTCG+CGG | 0.669605 | 3.3:-40988704 | None:intergenic |
| ACCACCAAAAGCCCTTCTTG+AGG | 0.671081 | 3.3:-40993229 | None:intergenic |
| GCGGTCGGAGAGTTTAGAGA+GGG | 0.673798 | 3.3:-40988685 | None:intergenic |
| GAATGAATGCAAAAGAACTG+AGG | 0.674993 | 3.3:+40992583 | MS.gene88652:CDS |
| GCTTCAACAGATACAGCAGA+GGG | 0.678873 | 3.3:+40995102 | MS.gene88652:CDS |
| TGGAGATCTGACATGCCTGA+GGG | 0.683331 | 3.3:+40993162 | MS.gene88652:CDS |
| GTACCCTTCTCCAATAACAG+AGG | 0.683761 | 3.3:+40992702 | MS.gene88652:CDS |
| AGCCTCAAGTAATGTCACTG+TGG | 0.688883 | 3.3:-40991369 | None:intergenic |
| GATTCGAGGGATCATCCGGT+CGG | 0.688962 | 3.3:+40993001 | MS.gene88652:CDS |
| TTGGGCAACACGTAAAGCAG+CGG | 0.692187 | 3.3:+40991286 | MS.gene88652:CDS |
| GTGCATGAGGGTGATCAAGG+GGG | 0.693951 | 3.3:+40993282 | MS.gene88652:CDS |
| AGCAATGTGAGTAATGGGAG+TGG | 0.697892 | 3.3:+40989017 | MS.gene88652:CDS |
| TGGGAACGCCAAAAGTATCG+GGG | 0.701595 | 3.3:-40995041 | None:intergenic |
| GATTGCAGATAAGACCTGTG+AGG | 0.702226 | 3.3:+40991888 | MS.gene88652:intron |
| GGGGTGTGAAGAGCAGACGA+AGG | 0.706689 | 3.3:-40988853 | None:intergenic |
| TGTGAGGGATAGCATGACAG+AGG | 0.715023 | 3.3:+40991904 | MS.gene88652:CDS |
| GGTTTGTATGGCGAAAATGG+TGG | 0.734663 | 3.3:+40989118 | MS.gene88652:CDS |
| ACTCTAGAGAACAGAGTACG+AGG | 0.734680 | 3.3:+40992922 | MS.gene88652:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAGATTTGTAAGAAA+TGG | - | chr3.3:40991512-40991531 | None:intergenic | 15.0% |
| !! | TAAAATATCTCGAAAAATAT+GGG | - | chr3.3:40989893-40989912 | None:intergenic | 15.0% |
| !!! | TACTTATACATTTTTTTTAG+AGG | - | chr3.3:40990055-40990074 | None:intergenic | 15.0% |
| !!! | TTTATTTTGTTATGTTTAGT+TGG | + | chr3.3:40994090-40994109 | MS.gene88652:intron | 15.0% |
| !! | AACTCAATAGTATAACAAAA+CGG | + | chr3.3:40990639-40990658 | MS.gene88652:intron | 20.0% |
| !! | AAGTTTATATCTTTCATATG+AGG | + | chr3.3:40994958-40994977 | MS.gene88652:intron | 20.0% |
| !! | AATACATCTTGAAGATAAAA+AGG | - | chr3.3:40994787-40994806 | None:intergenic | 20.0% |
| !! | AATATGAAGTGACAAAATAA+TGG | - | chr3.3:40990180-40990199 | None:intergenic | 20.0% |
| !! | AATTAATTCAATACAGTGTA+AGG | + | chr3.3:40991557-40991576 | MS.gene88652:intron | 20.0% |
| !! | ATAGTTACAAGCTTATTTAT+AGG | - | chr3.3:40994601-40994620 | None:intergenic | 20.0% |
| !! | ATTACATGATAATAGTATAG+AGG | + | chr3.3:40994479-40994498 | MS.gene88652:intron | 20.0% |
| !! | CATCTATTCATACTATATTT+GGG | - | chr3.3:40993854-40993873 | None:intergenic | 20.0% |
| !! | CTAAAATATCTCGAAAAATA+TGG | - | chr3.3:40989894-40989913 | None:intergenic | 20.0% |
| !! | TCATAATAGTAAATTCTCAT+TGG | + | chr3.3:40990290-40990309 | MS.gene88652:intron | 20.0% |
| !! | TCATATGAAAGATATAAACT+TGG | - | chr3.3:40994959-40994978 | None:intergenic | 20.0% |
| !! | TCATCTATTCATACTATATT+TGG | - | chr3.3:40993855-40993874 | None:intergenic | 20.0% |
| !! | TCATTTCTCATATTGTAAAA+CGG | + | chr3.3:40988904-40988923 | MS.gene88652:CDS | 20.0% |
| !! | TCTGTCAATAATAAATATCA+TGG | + | chr3.3:40992483-40992502 | MS.gene88652:CDS | 20.0% |
| !! | TTAGGAATTTAATCCTTAAT+TGG | + | chr3.3:40989789-40989808 | MS.gene88652:intron | 20.0% |
| !! | TTTATCACAAAATGATAACT+TGG | - | chr3.3:40991148-40991167 | None:intergenic | 20.0% |
| !! | TTTCGAAATTAATTAAACCA+AGG | - | chr3.3:40993991-40994010 | None:intergenic | 20.0% |
| !!! | ACAATATGAGAAATGATTTT+GGG | - | chr3.3:40988900-40988919 | None:intergenic | 20.0% |
| !!! | ATGATTTTTTATGCTTTAGA+TGG | + | chr3.3:40992066-40992085 | MS.gene88652:intron | 20.0% |
| !!! | ATTTGGATGTTTTTTTGTTT+TGG | + | chr3.3:40989302-40989321 | MS.gene88652:intron | 20.0% |
| !!! | CAAATCTTATTTTCTTGAAA+TGG | + | chr3.3:40991519-40991538 | MS.gene88652:intron | 20.0% |
| !!! | CATATTTTTCGAGATATTTT+AGG | + | chr3.3:40989892-40989911 | MS.gene88652:intron | 20.0% |
| !!! | GAAATTTGTAGATGTATTTT+AGG | + | chr3.3:40990088-40990107 | MS.gene88652:intron | 20.0% |
| !!! | GATTAATAACCCTAATTTTT+TGG | + | chr3.3:40989229-40989248 | MS.gene88652:CDS | 20.0% |
| !!! | TAAATAGAAGCTAAATTTTC+AGG | - | chr3.3:40991071-40991090 | None:intergenic | 20.0% |
| !!! | TACAATATGAGAAATGATTT+TGG | - | chr3.3:40988901-40988920 | None:intergenic | 20.0% |
| !!! | TTAGTCATCTAATTATTTTC+TGG | + | chr3.3:40991852-40991871 | MS.gene88652:intron | 20.0% |
| !!! | TTTAAGATTTACTTACAAGA+GGG | + | chr3.3:40990257-40990276 | MS.gene88652:intron | 20.0% |
| !!! | TTTTAAGATTTACTTACAAG+AGG | + | chr3.3:40990256-40990275 | MS.gene88652:intron | 20.0% |
| ! | AAACTAATATGTCAGAATAG+TGG | + | chr3.3:40990561-40990580 | MS.gene88652:intron | 25.0% |
| ! | AAAGATTGAACCAATTCATT+TGG | - | chr3.3:40990822-40990841 | None:intergenic | 25.0% |
| ! | AACTAATATGTCAGAATAGT+GGG | + | chr3.3:40990562-40990581 | MS.gene88652:intron | 25.0% |
| ! | AAGGTAAGATTCTATTAATC+TGG | - | chr3.3:40994768-40994787 | None:intergenic | 25.0% |
| ! | AAGTCAAGAACTGATTATTT+GGG | - | chr3.3:40992815-40992834 | None:intergenic | 25.0% |
| ! | AATAAAGTTCAGAACGTTAT+TGG | + | chr3.3:40994812-40994831 | MS.gene88652:intron | 25.0% |
| ! | AATTACAAATCTACCATTCT+AGG | - | chr3.3:40991792-40991811 | None:intergenic | 25.0% |
| ! | AATTGACATAGCATTATTGA+AGG | + | chr3.3:40993953-40993972 | MS.gene88652:intron | 25.0% |
| ! | ACAATACAATACAATACAGT+AGG | - | chr3.3:40994565-40994584 | None:intergenic | 25.0% |
| ! | ACATATTCTGACTAATAAAG+AGG | - | chr3.3:40993781-40993800 | None:intergenic | 25.0% |
| ! | AGGAAATAATGTAGAGATTA+AGG | + | chr3.3:40990437-40990456 | MS.gene88652:intron | 25.0% |
| ! | ATGAAATAACTTCACAATGT+AGG | + | chr3.3:40989571-40989590 | MS.gene88652:intron | 25.0% |
| ! | ATTGACATAGCATTATTGAA+GGG | + | chr3.3:40993954-40993973 | MS.gene88652:intron | 25.0% |
| ! | ATTTATTATTGACAGATCCA+TGG | - | chr3.3:40992479-40992498 | None:intergenic | 25.0% |
| ! | CAAGATTTATCTATATCATC+TGG | + | chr3.3:40992973-40992992 | MS.gene88652:CDS | 25.0% |
| ! | CAATACAATACAATACAGTA+GGG | - | chr3.3:40994564-40994583 | None:intergenic | 25.0% |
| ! | CCAATTATATCTGAATATAC+AGG | + | chr3.3:40990396-40990415 | MS.gene88652:intron | 25.0% |
| ! | CCTGTATATTCAGATATAAT+TGG | - | chr3.3:40990399-40990418 | None:intergenic | 25.0% |
| ! | GAAATAATGTAGAGATTAAG+GGG | + | chr3.3:40990439-40990458 | MS.gene88652:intron | 25.0% |
| ! | GAACTAATCATAGAAACTTA+AGG | - | chr3.3:40994203-40994222 | None:intergenic | 25.0% |
| ! | GAATTTAATCCTTAATTGGT+AGG | + | chr3.3:40989793-40989812 | MS.gene88652:intron | 25.0% |
| ! | GATATAAACTTGGCAAAAAA+AGG | - | chr3.3:40994949-40994968 | None:intergenic | 25.0% |
| ! | GGAAATAATGTAGAGATTAA+GGG | + | chr3.3:40990438-40990457 | MS.gene88652:intron | 25.0% |
| ! | GTTTAATTAATTTCGAAACC+AGG | + | chr3.3:40993993-40994012 | MS.gene88652:intron | 25.0% |
| ! | TAAGATTTAGTTACAAGAGT+GGG | + | chr3.3:40990207-40990226 | MS.gene88652:intron | 25.0% |
| ! | TACCTAAATTTCAGATAGTA+TGG | - | chr3.3:40990772-40990791 | None:intergenic | 25.0% |
| ! | TGTTTAATATCTGTTTGTCT+TGG | + | chr3.3:40993724-40993743 | MS.gene88652:CDS | 25.0% |
| ! | TTAAGATTTACTTACAAGAG+GGG | + | chr3.3:40990258-40990277 | MS.gene88652:intron | 25.0% |
| ! | TTAAGATTTAGTTACAAGAG+TGG | + | chr3.3:40990206-40990225 | MS.gene88652:intron | 25.0% |
| ! | TTAATCAATTTACAGATCCT+AGG | - | chr3.3:40989215-40989234 | None:intergenic | 25.0% |
| ! | TTCTGTTCTACTAAAACAAA+AGG | - | chr3.3:40990851-40990870 | None:intergenic | 25.0% |
| ! | TTGAAACTAATGATATGAAG+CGG | - | chr3.3:40990524-40990543 | None:intergenic | 25.0% |
| ! | TTGAAAGTTCGTTAATTACA+GGG | - | chr3.3:40993647-40993666 | None:intergenic | 25.0% |
| ! | TTGCAAACATGTTAAAAGTT+GGG | - | chr3.3:40990961-40990980 | None:intergenic | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | + | chr3.3:40989711-40989730 | MS.gene88652:intron | 25.0% |
| ! | TTTGCAAACATGTTAAAAGT+TGG | - | chr3.3:40990962-40990981 | None:intergenic | 25.0% |
| !! | AGTACTTTATCATTTAAGAC+AGG | - | chr3.3:40992276-40992295 | None:intergenic | 25.0% |
| !! | ATCTATCGTTTAAAATCATC+AGG | - | chr3.3:40994052-40994071 | None:intergenic | 25.0% |
| !! | CAATATGAGAAATGATTTTG+GGG | - | chr3.3:40988899-40988918 | None:intergenic | 25.0% |
| !! | CTTTTAGTGCTAATTAAAAG+AGG | - | chr3.3:40991669-40991688 | None:intergenic | 25.0% |
| !! | GTTTAATTTCTATACACTGT+CGG | + | chr3.3:40989376-40989395 | MS.gene88652:intron | 25.0% |
| !! | TATAAGCAGTTTAAGATCAT+TGG | - | chr3.3:40988777-40988796 | None:intergenic | 25.0% |
| !! | TTTACTGTAGTTGATTCATT+AGG | + | chr3.3:40991087-40991106 | MS.gene88652:intron | 25.0% |
| !! | TTTTAACGCAATAAACAATG+TGG | + | chr3.3:40989526-40989545 | MS.gene88652:intron | 25.0% |
| !!! | AAACACTAATTTTGAGACAT+AGG | - | chr3.3:40994023-40994042 | None:intergenic | 25.0% |
| !!! | AAGAAGCACTAAATATAGAA+TGG | + | chr3.3:40990912-40990931 | MS.gene88652:intron | 25.0% |
| !!! | AGATGTTTTAACAACTTTAC+AGG | + | chr3.3:40992867-40992886 | MS.gene88652:intron | 25.0% |
| !!! | ATGAATTGGTTCAATCTTTT+TGG | + | chr3.3:40990823-40990842 | MS.gene88652:intron | 25.0% |
| !!! | ATTTTGTTATGTTTAGTTGG+AGG | + | chr3.3:40994093-40994112 | MS.gene88652:intron | 25.0% |
| !!! | ATTTTTTATGCTTTAGATGG+TGG | + | chr3.3:40992069-40992088 | MS.gene88652:intron | 25.0% |
| !!! | CTTTTAAAATTGAACAGAAC+AGG | - | chr3.3:40990895-40990914 | None:intergenic | 25.0% |
| !!! | GAAAAATAATGGATTCTCAT+TGG | - | chr3.3:40990502-40990521 | None:intergenic | 25.0% |
| !!! | GGCATTTGTTGAAATATTTT+AGG | + | chr3.3:40990417-40990436 | MS.gene88652:intron | 25.0% |
| !!! | TTGTTTTGCTAGTCATAATA+TGG | + | chr3.3:40994646-40994665 | MS.gene88652:intron | 25.0% |
| !!! | TTTTTTATGCTTTAGATGGT+GGG | + | chr3.3:40992070-40992089 | MS.gene88652:intron | 25.0% |
| AAAATGTAAATCCTGATGAG+AGG | + | chr3.3:40992133-40992152 | MS.gene88652:CDS | 30.0% | |
| AAACACGGATTCAAATTCTA+AGG | + | chr3.3:40992197-40992216 | MS.gene88652:CDS | 30.0% | |
| AAATATCATGGTTTAGAGAG+AGG | + | chr3.3:40992495-40992514 | MS.gene88652:CDS | 30.0% | |
| AACAACTTTACAGGATTTCA+TGG | + | chr3.3:40992876-40992895 | MS.gene88652:intron | 30.0% | |
| AAGAACATTTCATTTGTCTG+TGG | + | chr3.3:40992001-40992020 | MS.gene88652:intron | 30.0% | |
| AAGTCAAAACTAGCAAAGTT+TGG | + | chr3.3:40993902-40993921 | MS.gene88652:intron | 30.0% | |
| AATAAAGAGTAAAGACAGGT+GGG | + | chr3.3:40994139-40994158 | MS.gene88652:intron | 30.0% | |
| AATGCAATTCCTACCAATTA+AGG | - | chr3.3:40989805-40989824 | None:intergenic | 30.0% | |
| AATTCCTAATCTATGAAGCA+CGG | - | chr3.3:40989778-40989797 | None:intergenic | 30.0% | |
| ACAACTTTACAGGATTTCAT+GGG | + | chr3.3:40992877-40992896 | MS.gene88652:intron | 30.0% | |
| ATTAATCGAGTATCAATTGC+AGG | + | chr3.3:40991193-40991212 | MS.gene88652:intron | 30.0% | |
| CACTAACATTGCATTTACAA+AGG | + | chr3.3:40990335-40990354 | MS.gene88652:intron | 30.0% | |
| CTTGAAAGTTCGTTAATTAC+AGG | - | chr3.3:40993648-40993667 | None:intergenic | 30.0% | |
| GAAGTCAAGAACTGATTATT+TGG | - | chr3.3:40992816-40992835 | None:intergenic | 30.0% | |
| GAATATTCCAATTCCAAGTA+TGG | + | chr3.3:40993051-40993070 | MS.gene88652:CDS | 30.0% | |
| GAATGAAAGTTGTGTTTAAG+TGG | + | chr3.3:40991038-40991057 | MS.gene88652:intron | 30.0% | |
| GAGAATTATTTGTCCTAGAA+TGG | + | chr3.3:40991776-40991795 | MS.gene88652:intron | 30.0% | |
| GATATGAAGCGGAAAAATAA+TGG | - | chr3.3:40990513-40990532 | None:intergenic | 30.0% | |
| GATTAATTTCTGTGCATTGA+TGG | - | chr3.3:40989989-40990008 | None:intergenic | 30.0% | |
| GGGTAAACCTTTCATTAAAT+GGG | - | chr3.3:40993098-40993117 | None:intergenic | 30.0% | |
| GTTTATTGGATCTAGGAAAA+AGG | - | chr3.3:40994355-40994374 | None:intergenic | 30.0% | |
| TAAACAATGCAGAGATTAAG+TGG | + | chr3.3:40990114-40990133 | MS.gene88652:intron | 30.0% | |
| TAAACTCATCAGTCAATGAT+TGG | - | chr3.3:40989414-40989433 | None:intergenic | 30.0% | |
| TAAGAAATGGTAAGATGATG+TGG | - | chr3.3:40991499-40991518 | None:intergenic | 30.0% | |
| TAAGATTTACTTACAAGAGG+GGG | + | chr3.3:40990259-40990278 | MS.gene88652:intron | 30.0% | |
| TAATTGGTAGGAATTGCATT+AGG | + | chr3.3:40989805-40989824 | MS.gene88652:intron | 30.0% | |
| TAGGAACTAACCTATAAAAG+TGG | + | chr3.3:40989911-40989930 | MS.gene88652:intron | 30.0% | |
| TAGGAATAAAGAGTAAAGAC+AGG | + | chr3.3:40994135-40994154 | MS.gene88652:intron | 30.0% | |
| TCAGATATAATTGGACCAAA+GGG | - | chr3.3:40990390-40990409 | None:intergenic | 30.0% | |
| TCTAGAAAAACCTGCAATAT+TGG | - | chr3.3:40992664-40992683 | None:intergenic | 30.0% | |
| TGGGTAAACCTTTCATTAAA+TGG | - | chr3.3:40993099-40993118 | None:intergenic | 30.0% | |
| TGTTCTTTCGTTTGAATCTT+TGG | - | chr3.3:40992424-40992443 | None:intergenic | 30.0% | |
| TTATTCACCCATGAGTTTAT+TGG | - | chr3.3:40994369-40994388 | None:intergenic | 30.0% | |
| TTCAGATATAATTGGACCAA+AGG | - | chr3.3:40990391-40990410 | None:intergenic | 30.0% | |
| TTCAGTGTAATTACAAGTGT+CGG | - | chr3.3:40989680-40989699 | None:intergenic | 30.0% | |
| TTTCCAAAACCTTGAAAGAA+GGG | + | chr3.3:40992308-40992327 | MS.gene88652:CDS | 30.0% | |
| ! | AAACCATTATACTTGCTAGA+AGG | - | chr3.3:40993027-40993046 | None:intergenic | 30.0% |
| ! | AACTGCAATAAAAGTTGATC+TGG | - | chr3.3:40995144-40995163 | None:intergenic | 30.0% |
| ! | AATGTGCTATCAATTTTCTG+CGG | - | chr3.3:40991702-40991721 | None:intergenic | 30.0% |
| ! | ACTTTATCATTTAAGACAGG+TGG | - | chr3.3:40992273-40992292 | None:intergenic | 30.0% |
| ! | AGATCAACTTTTATTGCAGT+TGG | + | chr3.3:40995143-40995162 | MS.gene88652:CDS | 30.0% |
| ! | ATGATGGAAATTCAAGACAA+AGG | + | chr3.3:40992520-40992539 | MS.gene88652:CDS | 30.0% |
| ! | CACCATACTATCTGAAATTT+AGG | + | chr3.3:40990767-40990786 | MS.gene88652:intron | 30.0% |
| ! | TTTTCCAAAACCTTGAAAGA+AGG | + | chr3.3:40992307-40992326 | MS.gene88652:CDS | 30.0% |
| !! | ATTGCTGTTACTATTTTGCA+AGG | + | chr3.3:40994238-40994257 | MS.gene88652:intron | 30.0% |
| !! | GTGGAGGTATTATTTGAAAA+TGG | + | chr3.3:40995018-40995037 | MS.gene88652:CDS | 30.0% |
| !! | TTGCTGTTACTATTTTGCAA+GGG | + | chr3.3:40994239-40994258 | MS.gene88652:intron | 30.0% |
| !!! | CAAGGTTTTGGAAAAATTCT+GGG | - | chr3.3:40992302-40992321 | None:intergenic | 30.0% |
| !!! | TAACCCTAATTTTTTGGCTA+AGG | + | chr3.3:40989235-40989254 | MS.gene88652:CDS | 30.0% |
| !!! | TCAAGGTTTTGGAAAAATTC+TGG | - | chr3.3:40992303-40992322 | None:intergenic | 30.0% |
| !!! | TGAATCAGTTTTTTGCAATG+AGG | + | chr3.3:40990152-40990171 | MS.gene88652:intron | 30.0% |
| AAACAATGACGAAGAGTCAA+AGG | + | chr3.3:40992392-40992411 | MS.gene88652:CDS | 35.0% | |
| AAAGGTTTACCCAAACTGAT+GGG | + | chr3.3:40993106-40993125 | MS.gene88652:CDS | 35.0% | |
| AAGAGAAACCATGACAAAAG+TGG | - | chr3.3:40992042-40992061 | None:intergenic | 35.0% | |
| AAGCTAACGATACAATTGAC+AGG | + | chr3.3:40992610-40992629 | MS.gene88652:CDS | 35.0% | |
| AAGGAAAGCAAATGCAGAAT+TGG | - | chr3.3:40994930-40994949 | None:intergenic | 35.0% | |
| AATCTATATCACCTGCTTGA+AGG | - | chr3.3:40993557-40993576 | None:intergenic | 35.0% | |
| ACCTGTGGAAAAAATTTGCA+GGG | + | chr3.3:40991933-40991952 | MS.gene88652:CDS | 35.0% | |
| ACTTCAAAGGGATAGAGAAA+CGG | - | chr3.3:40994394-40994413 | None:intergenic | 35.0% | |
| AGAACAGGAACCAAATGAAT+TGG | + | chr3.3:40990809-40990828 | MS.gene88652:intron | 35.0% | |
| AGCAATTGGTGAACTTCAAA+GGG | - | chr3.3:40994406-40994425 | None:intergenic | 35.0% | |
| AGCGACTCAAGAAACAAATA+TGG | - | chr3.3:40991465-40991484 | None:intergenic | 35.0% | |
| AGGAAAGCAAATGCAGAATT+GGG | - | chr3.3:40994929-40994948 | None:intergenic | 35.0% | |
| ATATCCGTGCTTCATAGATT+AGG | + | chr3.3:40989771-40989790 | MS.gene88652:intron | 35.0% | |
| ATCAACCAGTTCTTCAAACA+CGG | + | chr3.3:40992182-40992201 | MS.gene88652:CDS | 35.0% | |
| ATCTATATCACCTGCTTGAA+GGG | - | chr3.3:40993556-40993575 | None:intergenic | 35.0% | |
| ATGATGTGACAACACATGAT+TGG | - | chr3.3:40989479-40989498 | None:intergenic | 35.0% | |
| ATGTTCTTACCAGATGACAA+TGG | - | chr3.3:40991989-40992008 | None:intergenic | 35.0% | |
| CAACAAGTTTCCTCTGTTAT+TGG | - | chr3.3:40992715-40992734 | None:intergenic | 35.0% | |
| CAACGAAACTTCATCAGAAA+AGG | - | chr3.3:40994731-40994750 | None:intergenic | 35.0% | |
| CAATAACAGAGGAAACTTGT+TGG | + | chr3.3:40992713-40992732 | MS.gene88652:CDS | 35.0% | |
| CCTAGATCCAATAAACTCAT+GGG | + | chr3.3:40994359-40994378 | MS.gene88652:intron | 35.0% | |
| CGTAACAAACTTTCCTTTGA+GGG | - | chr3.3:40994683-40994702 | None:intergenic | 35.0% | |
| CTACCTTAGAGTGATATACA+AGG | + | chr3.3:40990985-40991004 | MS.gene88652:intron | 35.0% | |
| CTCAAGAAACAAATATGGCA+TGG | - | chr3.3:40991460-40991479 | None:intergenic | 35.0% | |
| CTGCCTTAGCCAAAAAATTA+GGG | - | chr3.3:40989241-40989260 | None:intergenic | 35.0% | |
| GAATAAAGAGTAAAGACAGG+TGG | + | chr3.3:40994138-40994157 | MS.gene88652:intron | 35.0% | |
| GAATGAATGCAAAAGAACTG+AGG | + | chr3.3:40992583-40992602 | MS.gene88652:CDS | 35.0% | |
| GAATTATGAAGACTTTGCTC+AGG | + | chr3.3:40992542-40992561 | MS.gene88652:CDS | 35.0% | |
| TAATCTATGAAGCACGGATA+TGG | - | chr3.3:40989772-40989791 | None:intergenic | 35.0% | |
| TAGCAATTGGTGAACTTCAA+AGG | - | chr3.3:40994407-40994426 | None:intergenic | 35.0% | |
| TCATGTCCTCAAGACATAAA+AGG | + | chr3.3:40991583-40991602 | MS.gene88652:intron | 35.0% | |
| TCCTAGATCCAATAAACTCA+TGG | + | chr3.3:40994358-40994377 | MS.gene88652:intron | 35.0% | |
| TCGTGATCATAATGTTCAGT+TGG | + | chr3.3:40994996-40995015 | MS.gene88652:intron | 35.0% | |
| TCGTTTGCTTGTAAAGCTAA+TGG | + | chr3.3:40993611-40993630 | MS.gene88652:CDS | 35.0% | |
| TCTACAACAGCATGACAAAT+AGG | + | chr3.3:40995185-40995204 | MS.gene88652:CDS | 35.0% | |
| TCTTCACTTGTTTAGCACTT+GGG | + | chr3.3:40994885-40994904 | MS.gene88652:intron | 35.0% | |
| TGATCATAATGTTCAGTTGG+TGG | + | chr3.3:40994999-40995018 | MS.gene88652:intron | 35.0% | |
| TGATGTGACAACACATGATT+GGG | - | chr3.3:40989478-40989497 | None:intergenic | 35.0% | |
| TGGAAAAAATTTGCAGGGAA+AGG | + | chr3.3:40991938-40991957 | MS.gene88652:CDS | 35.0% | |
| TGGGTTCATTATAGGAAGAA+GGG | + | chr3.3:40994158-40994177 | MS.gene88652:intron | 35.0% | |
| TGTTTGAGCTTGAAGAATTG+AGG | - | chr3.3:40992377-40992396 | None:intergenic | 35.0% | |
| TTCTTCACTTGTTTAGCACT+TGG | + | chr3.3:40994884-40994903 | MS.gene88652:intron | 35.0% | |
| TTGCCTTGTATATCACTCTA+AGG | - | chr3.3:40990991-40991010 | None:intergenic | 35.0% | |
| TTTCCTCTGTTATTGGAGAA+GGG | - | chr3.3:40992708-40992727 | None:intergenic | 35.0% | |
| ! | ATGTGCTATCAATTTTCTGC+GGG | - | chr3.3:40991701-40991720 | None:intergenic | 35.0% |
| ! | GTAAAGCTAATGGATAGAAC+TGG | + | chr3.3:40993621-40993640 | MS.gene88652:CDS | 35.0% |
| ! | GTTGATAAATCCTTCACTGA+TGG | - | chr3.3:40992168-40992187 | None:intergenic | 35.0% |
| ! | TGCAATAAAAGTTGATCTGG+TGG | - | chr3.3:40995141-40995160 | None:intergenic | 35.0% |
| ! | TTCATACTATATTTGGGACG+TGG | - | chr3.3:40993848-40993867 | None:intergenic | 35.0% |
| ! | TTCTAAAGATGAAGCTACCT+TGG | + | chr3.3:40993383-40993402 | MS.gene88652:CDS | 35.0% |
| ! | TTTGAAGTTCACCAATTGCT+AGG | + | chr3.3:40994406-40994425 | MS.gene88652:intron | 35.0% |
| !! | ACAAAAGTATCACATGAGTC+AGG | + | chr3.3:40991750-40991769 | MS.gene88652:intron | 35.0% |
| !! | AGAGATTCGTTTTTGATGGA+GGG | - | chr3.3:40988822-40988841 | None:intergenic | 35.0% |
| !! | ATGCTGCAGGTATGTTTTTA+TGG | + | chr3.3:40992789-40992808 | MS.gene88652:intron | 35.0% |
| !! | CAAAAGTATCACATGAGTCA+GGG | + | chr3.3:40991751-40991770 | MS.gene88652:intron | 35.0% |
| !! | CCTCAAAGGAAAGTTTGTTA+CGG | + | chr3.3:40994681-40994700 | MS.gene88652:intron | 35.0% |
| !! | TATGAGAAATGATTTTGGGG+AGG | - | chr3.3:40988896-40988915 | None:intergenic | 35.0% |
| !! | TTCAAATTCTAAGGCCAAAG+CGG | + | chr3.3:40992206-40992225 | MS.gene88652:CDS | 35.0% |
| AAACTGATGGGAATGCTTTG+GGG | + | chr3.3:40993118-40993137 | MS.gene88652:CDS | 40.0% | |
| AAATTTGCAGGGAAAGGAGA+TGG | + | chr3.3:40991944-40991963 | MS.gene88652:CDS | 40.0% | |
| AACGAAAGAACAAATGCCAC+TGG | + | chr3.3:40992432-40992451 | MS.gene88652:CDS | 40.0% | |
| AACTTCCTAATCCTCCAAAG+AGG | - | chr3.3:40994274-40994293 | None:intergenic | 40.0% | |
| AAGATCATTGGAATAGCGTC+TGG | - | chr3.3:40988765-40988784 | None:intergenic | 40.0% | |
| AAGCTACCTTGGAAGCAATT+CGG | + | chr3.3:40993394-40993413 | MS.gene88652:CDS | 40.0% | |
| AAGTGAAGGAAGATCTCTTG+CGG | + | chr3.3:40995067-40995086 | MS.gene88652:CDS | 40.0% | |
| AATGGGAGCAATGTGAGTAA+TGG | + | chr3.3:40989011-40989030 | MS.gene88652:CDS | 40.0% | |
| AATTCCAAGTATGGAAGAGG+TGG | + | chr3.3:40993060-40993079 | MS.gene88652:CDS | 40.0% | |
| ACAATGTGGTGAGACTCAAT+TGG | + | chr3.3:40989540-40989559 | MS.gene88652:intron | 40.0% | |
| ACAGGTCTGAAAATGATCAG+AGG | + | chr3.3:40992628-40992647 | MS.gene88652:CDS | 40.0% | |
| ACCTCAGAGGAGAGAATAAT+GGG | + | chr3.3:40988994-40989013 | MS.gene88652:CDS | 40.0% | |
| ACCTCTTCCATACTTGGAAT+TGG | - | chr3.3:40993061-40993080 | None:intergenic | 40.0% | |
| ACTGGAAATGTGCCTAATGA+TGG | + | chr3.3:40992450-40992469 | MS.gene88652:CDS | 40.0% | |
| ACTGGCATACTGTTAGGAAT+AGG | + | chr3.3:40994116-40994135 | MS.gene88652:intron | 40.0% | |
| ACTTTACAGGATTTCATGGG+TGG | + | chr3.3:40992880-40992899 | MS.gene88652:intron | 40.0% | |
| AGATCTTCCTTCACTTCCAT+GGG | - | chr3.3:40995063-40995082 | None:intergenic | 40.0% | |
| AGATGATTTACCAGTGGAAG+TGG | + | chr3.3:40992335-40992354 | MS.gene88652:CDS | 40.0% | |
| AGCAAATTGTCCAAGCTTTG+TGG | - | chr3.3:40991233-40991252 | None:intergenic | 40.0% | |
| ATCACCAAAATCAGTGCATG+AGG | + | chr3.3:40993269-40993288 | MS.gene88652:CDS | 40.0% | |
| ATCATTAGGCACATTTCCAG+TGG | - | chr3.3:40992451-40992470 | None:intergenic | 40.0% | |
| ATCGGATACATGTGTAGAGT+TGG | + | chr3.3:40990590-40990609 | MS.gene88652:intron | 40.0% | |
| ATGGGAGCAATGTGAGTAAT+GGG | + | chr3.3:40989012-40989031 | MS.gene88652:CDS | 40.0% | |
| ATTGCAGATAAGACCTGTGA+GGG | + | chr3.3:40991889-40991908 | MS.gene88652:intron | 40.0% | |
| ATTGCTTCAGCAGTCATTTC+AGG | - | chr3.3:40993468-40993487 | None:intergenic | 40.0% | |
| CAAACTGATGGGAATGCTTT+GGG | + | chr3.3:40993117-40993136 | MS.gene88652:CDS | 40.0% | |
| CAGGTCTGAAAATGATCAGA+GGG | + | chr3.3:40992629-40992648 | MS.gene88652:CDS | 40.0% | |
| CATCTAAGTCCCTTCTTTCA+AGG | - | chr3.3:40992320-40992339 | None:intergenic | 40.0% | |
| CCAATCAAATCACACCAAAG+TGG | - | chr3.3:40989942-40989961 | None:intergenic | 40.0% | |
| CCATCAAAAACGAATCTCTC+CGG | + | chr3.3:40988823-40988842 | MS.gene88652:CDS | 40.0% | |
| CCCATGAGTTTATTGGATCT+AGG | - | chr3.3:40994362-40994381 | None:intergenic | 40.0% | |
| CCGTAACAAACTTTCCTTTG+AGG | - | chr3.3:40994684-40994703 | None:intergenic | 40.0% | |
| CTAGTTTCTGTCAAAACAGC+TGG | - | chr3.3:40992105-40992124 | None:intergenic | 40.0% | |
| CTGTTCTTTCCATTCGACAA+AGG | - | chr3.3:40990796-40990815 | None:intergenic | 40.0% | |
| CTGTTTGTCTTGGATTCAAC+AGG | + | chr3.3:40993734-40993753 | MS.gene88652:CDS | 40.0% | |
| CTTCAAAGGGATAGAGAAAC+GGG | - | chr3.3:40994393-40994412 | None:intergenic | 40.0% | |
| CTTCACAATGTAGGTGCATT+AGG | + | chr3.3:40989580-40989599 | MS.gene88652:intron | 40.0% | |
| CTTTGTCGAATGGAAAGAAC+AGG | + | chr3.3:40990794-40990813 | MS.gene88652:intron | 40.0% | |
| GAAAGGTTTACCCAAACTGA+TGG | + | chr3.3:40993105-40993124 | MS.gene88652:CDS | 40.0% | |
| GACCTGTGGAAAAAATTTGC+AGG | + | chr3.3:40991932-40991951 | MS.gene88652:CDS | 40.0% | |
| GACGCATCCCATTTAATGAA+AGG | + | chr3.3:40993088-40993107 | MS.gene88652:CDS | 40.0% | |
| GATTCAAAGCCATTGTCATC+TGG | + | chr3.3:40991977-40991996 | MS.gene88652:CDS | 40.0% | |
| GCATTAGGAACTATGAAGCA+CGG | + | chr3.3:40989607-40989626 | MS.gene88652:intron | 40.0% | |
| GCTGCCTTAGCCAAAAAATT+AGG | - | chr3.3:40989242-40989261 | None:intergenic | 40.0% | |
| GGACTTAGATGATTTACCAG+TGG | + | chr3.3:40992329-40992348 | MS.gene88652:CDS | 40.0% | |
| GGATGCATCAGCATATAGAA+AGG | - | chr3.3:40994543-40994562 | None:intergenic | 40.0% | |
| GGTGCATTAGGATTTGCATT+AGG | + | chr3.3:40989592-40989611 | MS.gene88652:intron | 40.0% | |
| GGTTTAGAGAGAGGTAATGA+TGG | + | chr3.3:40992504-40992523 | MS.gene88652:CDS | 40.0% | |
| GTGGGTTCATTATAGGAAGA+AGG | + | chr3.3:40994157-40994176 | MS.gene88652:intron | 40.0% | |
| GTTATGTTTAGTTGGAGGAC+TGG | + | chr3.3:40994098-40994117 | MS.gene88652:intron | 40.0% | |
| GTTTCCTCTGTTATTGGAGA+AGG | - | chr3.3:40992709-40992728 | None:intergenic | 40.0% | |
| TACAAGCAAACGATCATCTC+CGG | - | chr3.3:40993604-40993623 | None:intergenic | 40.0% | |
| TACCTCAGAGGAGAGAATAA+TGG | + | chr3.3:40988993-40989012 | MS.gene88652:CDS | 40.0% | |
| TAGAGAAAGCTGTAGTGTGA+GGG | + | chr3.3:40994308-40994327 | MS.gene88652:intron | 40.0% | |
| TATAGATTCAGCCTTTGCAG+AGG | + | chr3.3:40993569-40993588 | MS.gene88652:CDS | 40.0% | |
| TATCTGCATTGTCTCAGGTT+TGG | + | chr3.3:40989276-40989295 | MS.gene88652:intron | 40.0% | |
| TCACCAAAATCAGTGCATGA+GGG | + | chr3.3:40993270-40993289 | MS.gene88652:CDS | 40.0% | |
| TCCAATTCCAAGTATGGAAG+AGG | + | chr3.3:40993057-40993076 | MS.gene88652:CDS | 40.0% | |
| TCTGAAAATGATCAGAGGGA+TGG | + | chr3.3:40992633-40992652 | MS.gene88652:CDS | 40.0% | |
| TGAAATGACTGCTGAAGCAA+TGG | + | chr3.3:40993467-40993486 | MS.gene88652:CDS | 40.0% | |
| TGAATCCGTGTTTGAAGAAC+TGG | - | chr3.3:40992190-40992209 | None:intergenic | 40.0% | |
| TGACAAAAGTGGTTCGAGAT+TGG | - | chr3.3:40992031-40992050 | None:intergenic | 40.0% | |
| TGACATTACTTGAGGCTTGT+CGG | + | chr3.3:40991375-40991394 | MS.gene88652:CDS | 40.0% | |
| TGTCCTCAAGACATAAAAGG+AGG | + | chr3.3:40991586-40991605 | MS.gene88652:intron | 40.0% | |
| TGTCTTGGATTCAACAGGTA+TGG | + | chr3.3:40993739-40993758 | MS.gene88652:intron | 40.0% | |
| TTGCTTCAGCAGTCATTTCA+GGG | - | chr3.3:40993467-40993486 | None:intergenic | 40.0% | |
| TTTAGGTAGCCTTTGTCGAA+TGG | + | chr3.3:40990784-40990803 | MS.gene88652:intron | 40.0% | |
| ! | AAGACAGGTGGGTTCATTAT+AGG | + | chr3.3:40994150-40994169 | MS.gene88652:intron | 40.0% |
| ! | AGAAAAGGCACAACGGAAAA+CGG | - | chr3.3:40994716-40994735 | None:intergenic | 40.0% |
| ! | AGTCCCTTCTTTCAAGGTTT+TGG | - | chr3.3:40992314-40992333 | None:intergenic | 40.0% |
| ! | ATTTCCTCAAGAAGGGCTTT+TGG | + | chr3.3:40993225-40993244 | MS.gene88652:CDS | 40.0% |
| ! | CAAAGCATTCCCATCAGTTT+GGG | - | chr3.3:40993118-40993137 | None:intergenic | 40.0% |
| ! | CCACTTTGGTGTGATTTGAT+TGG | + | chr3.3:40989939-40989958 | MS.gene88652:intron | 40.0% |
| ! | CGTTTTTGATGGAGGGTTTA+GGG | - | chr3.3:40988815-40988834 | None:intergenic | 40.0% |
| ! | CTTCATCAGAAAAGGCACAA+CGG | - | chr3.3:40994723-40994742 | None:intergenic | 40.0% |
| ! | CTTTTATTGCAGTTGGCATC+AGG | + | chr3.3:40995150-40995169 | MS.gene88652:CDS | 40.0% |
| ! | GGTATCAGATTTTCCCTCAA+AGG | + | chr3.3:40994667-40994686 | MS.gene88652:intron | 40.0% |
| ! | GTGTTTAGAGTTTCACCCTT+TGG | + | chr3.3:40990372-40990391 | MS.gene88652:intron | 40.0% |
| ! | TTTGGTGGTAGTTCTGTTGA+TGG | + | chr3.3:40993243-40993262 | MS.gene88652:CDS | 40.0% |
| !! | ATCTCGAACCACTTTTGTCA+TGG | + | chr3.3:40992031-40992050 | MS.gene88652:intron | 40.0% |
| !! | GAGAGATTCGTTTTTGATGG+AGG | - | chr3.3:40988823-40988842 | None:intergenic | 40.0% |
| !! | TCAGAATAGTGGGTTCTCAT+CGG | + | chr3.3:40990572-40990591 | MS.gene88652:intron | 40.0% |
| !! | TCATAATGTTCAGTTGGTGG+AGG | + | chr3.3:40995002-40995021 | MS.gene88652:intron | 40.0% |
| !! | TCGTTTTTGATGGAGGGTTT+AGG | - | chr3.3:40988816-40988835 | None:intergenic | 40.0% |
| !! | TGTCTCAGGTTTGGTGAATT+TGG | + | chr3.3:40989285-40989304 | MS.gene88652:intron | 40.0% |
| !!! | TCCCTGCAAATTTTTTCCAC+AGG | - | chr3.3:40991937-40991956 | None:intergenic | 40.0% |
| !!! | TCTTGAGTCGCTTGTTTTGA+AGG | + | chr3.3:40991473-40991492 | MS.gene88652:intron | 40.0% |
| !!! | TTTTGAGACATAGGAATGCC+TGG | - | chr3.3:40994014-40994033 | None:intergenic | 40.0% |
| AACACAGCTCGAAAGACAAC+AGG | + | chr3.3:40992752-40992771 | MS.gene88652:CDS | 45.0% | |
| AAGCCCTTCTTGAGGAAATC+TGG | - | chr3.3:40993224-40993243 | None:intergenic | 45.0% | |
| AAGGGACTAACCTTCCTCTT+TGG | + | chr3.3:40994257-40994276 | MS.gene88652:intron | 45.0% | |
| AAGTATGGAAGAGGTGGTGA+TGG | + | chr3.3:40993066-40993085 | MS.gene88652:CDS | 45.0% | |
| AATGGGAGTGGTTCTTTGGT+TGG | + | chr3.3:40989029-40989048 | MS.gene88652:CDS | 45.0% | |
| ACTGCTTGAATGCAAAGCCA+AGG | - | chr3.3:40991327-40991346 | None:intergenic | 45.0% | |
| AGAGAAAGCTGTAGTGTGAG+GGG | + | chr3.3:40994309-40994328 | MS.gene88652:intron | 45.0% | |
| AGCAGACGAAGGATAACAAC+CGG | - | chr3.3:40988845-40988864 | None:intergenic | 45.0% | |
| AGCCTCAAGTAATGTCACTG+TGG | - | chr3.3:40991372-40991391 | None:intergenic | 45.0% | |
| AGCGGTTTGTATGGCGAAAA+TGG | + | chr3.3:40989115-40989134 | MS.gene88652:CDS | 45.0% | |
| AGCTACCTTGGAAGCAATTC+GGG | + | chr3.3:40993395-40993414 | MS.gene88652:CDS | 45.0% | |
| AGTCCTGCTCCAGTAAGAAT+TGG | - | chr3.3:40993704-40993723 | None:intergenic | 45.0% | |
| ATCACCACCTCTTCCATACT+TGG | - | chr3.3:40993067-40993086 | None:intergenic | 45.0% | |
| ATCGAGTATCAATTGCAGGC+TGG | + | chr3.3:40991197-40991216 | MS.gene88652:intron | 45.0% | |
| ATGAAGCACGGATATGGACA+CGG | - | chr3.3:40989766-40989785 | None:intergenic | 45.0% | |
| ATGGCCAGATTTCCTCAAGA+AGG | + | chr3.3:40993217-40993236 | MS.gene88652:CDS | 45.0% | |
| ATTGCTGCTCTTTACCTCAG+AGG | + | chr3.3:40988981-40989000 | MS.gene88652:CDS | 45.0% | |
| CACAACGGAAAACGGTTACA+AGG | - | chr3.3:40994708-40994727 | None:intergenic | 45.0% | |
| CCAAACTGATGGGAATGCTT+TGG | + | chr3.3:40993116-40993135 | MS.gene88652:CDS | 45.0% | |
| CCTCAAGACATAAAAGGAGG+CGG | + | chr3.3:40991589-40991608 | MS.gene88652:intron | 45.0% | |
| CGGCCTTCTAGCAAGTATAA+TGG | + | chr3.3:40993021-40993040 | MS.gene88652:CDS | 45.0% | |
| CGTTTCAGAAGATGTGTCCT+AGG | + | chr3.3:40989195-40989214 | MS.gene88652:CDS | 45.0% | |
| CTAGAGAAAGCTGTAGTGTG+AGG | + | chr3.3:40994307-40994326 | MS.gene88652:intron | 45.0% | |
| CTCCAGTAAGAATTGGCTGA+TGG | - | chr3.3:40993697-40993716 | None:intergenic | 45.0% | |
| CTGTGTTAACTGTCTCTGGA+TGG | - | chr3.3:40992739-40992758 | None:intergenic | 45.0% | |
| GAACAGAATAAGGCTGTGCA+GGG | + | chr3.3:40989086-40989105 | MS.gene88652:CDS | 45.0% | |
| GAAGAAACAGACTGCGTGTT+AGG | - | chr3.3:40994437-40994456 | None:intergenic | 45.0% | |
| GAAGACTGATCCATCAGTGA+AGG | + | chr3.3:40992155-40992174 | MS.gene88652:CDS | 45.0% | |
| GACATTACTTGAGGCTTGTC+GGG | + | chr3.3:40991376-40991395 | MS.gene88652:CDS | 45.0% | |
| GAGATCTTCCTTCACTTCCA+TGG | - | chr3.3:40995064-40995083 | None:intergenic | 45.0% | |
| GATCCATGGAAGCCATCATT+AGG | - | chr3.3:40992465-40992484 | None:intergenic | 45.0% | |
| GATTGCAGATAAGACCTGTG+AGG | + | chr3.3:40991888-40991907 | MS.gene88652:intron | 45.0% | |
| GCCTCAAGTAATGTCACTGT+GGG | - | chr3.3:40991371-40991390 | None:intergenic | 45.0% | |
| GCTTCAACAGATACAGCAGA+GGG | + | chr3.3:40995102-40995121 | MS.gene88652:CDS | 45.0% | |
| GGTTTGTATGGCGAAAATGG+TGG | + | chr3.3:40989118-40989137 | MS.gene88652:CDS | 45.0% | |
| GTACCCTTCTCCAATAACAG+AGG | + | chr3.3:40992702-40992721 | MS.gene88652:CDS | 45.0% | |
| GTTAGGAGGATCCTAGCAAT+TGG | - | chr3.3:40994420-40994439 | None:intergenic | 45.0% | |
| GTTTGTGAAGCCGTTGTTTG+AGG | + | chr3.3:40989055-40989074 | MS.gene88652:CDS | 45.0% | |
| TATGAAGCACGGACACTTCT+CGG | + | chr3.3:40989618-40989637 | MS.gene88652:intron | 45.0% | |
| TCATCTGATGAACATGCTGC+AGG | + | chr3.3:40992776-40992795 | MS.gene88652:CDS | 45.0% | |
| TCCCATTATTCTCTCCTCTG+AGG | - | chr3.3:40988998-40989017 | None:intergenic | 45.0% | |
| TCCTAATCCTCCAAAGAGGA+AGG | - | chr3.3:40994270-40994289 | None:intergenic | 45.0% | |
| TCGAGTATCAATTGCAGGCT+GGG | + | chr3.3:40991198-40991217 | MS.gene88652:intron | 45.0% | |
| TGAGACAATGCAGATACCAC+AGG | - | chr3.3:40989272-40989291 | None:intergenic | 45.0% | |
| TGCCAAACACTTCTTGCAGA+GGG | - | chr3.3:40993360-40993379 | None:intergenic | 45.0% | |
| TGCCATCAGCCAATTCTTAC+TGG | + | chr3.3:40993692-40993711 | MS.gene88652:CDS | 45.0% | |
| TGGCCAGATTTCCTCAAGAA+GGG | + | chr3.3:40993218-40993237 | MS.gene88652:CDS | 45.0% | |
| TGTGGTATCTGCATTGTCTC+AGG | + | chr3.3:40989271-40989290 | MS.gene88652:CDS | 45.0% | |
| TTGCCAAACACTTCTTGCAG+AGG | - | chr3.3:40993361-40993380 | None:intergenic | 45.0% | |
| ! | ACCTTCCTCTTTGGAGGATT+AGG | + | chr3.3:40994266-40994285 | MS.gene88652:intron | 45.0% |
| ! | ACTCTAGAGAACAGAGTACG+AGG | + | chr3.3:40992922-40992941 | MS.gene88652:CDS | 45.0% |
| ! | AGCAATGTGAGTAATGGGAG+TGG | + | chr3.3:40989017-40989036 | MS.gene88652:CDS | 45.0% |
| ! | CATGGGAACGCCAAAAGTAT+CGG | - | chr3.3:40995046-40995065 | None:intergenic | 45.0% |
| ! | CCAAAGCATTCCCATCAGTT+TGG | - | chr3.3:40993119-40993138 | None:intergenic | 45.0% |
| ! | GAAAATGGCCCCGATACTTT+TGG | + | chr3.3:40995033-40995052 | MS.gene88652:CDS | 45.0% |
| ! | GAAGAATTGAGGCATTTGCG+AGG | - | chr3.3:40992366-40992385 | None:intergenic | 45.0% |
| ! | GAGTAATGGGAGTGGTTCTT+TGG | + | chr3.3:40989025-40989044 | MS.gene88652:CDS | 45.0% |
| ! | GATGGTTCTGCCAATATTGC+AGG | + | chr3.3:40992651-40992670 | MS.gene88652:CDS | 45.0% |
| ! | GGCGAAAATGGTGGAAATGA+CGG | + | chr3.3:40989127-40989146 | MS.gene88652:CDS | 45.0% |
| ! | GGGTATGGTGCTTCTAGAAA+TGG | + | chr3.3:40993198-40993217 | MS.gene88652:CDS | 45.0% |
| ! | TAAAAGTGGCACTGCCACTT+TGG | + | chr3.3:40989925-40989944 | MS.gene88652:intron | 45.0% |
| ! | TCTGTCAAAACAGCTGGTTC+AGG | - | chr3.3:40992099-40992118 | None:intergenic | 45.0% |
| ! | TTTGATGGAGGGTTTAGGGT+CGG | - | chr3.3:40988811-40988830 | None:intergenic | 45.0% |
| !! | ATGGGAACGCCAAAAGTATC+GGG | - | chr3.3:40995045-40995064 | None:intergenic | 45.0% |
| !! | CCGGAGAGATTCGTTTTTGA+TGG | - | chr3.3:40988826-40988845 | None:intergenic | 45.0% |
| !! | GAAATGATTTTGGGGAGGTG+AGG | - | chr3.3:40988891-40988910 | None:intergenic | 45.0% |
| !! | GGCAGAGGCATTAATTTCCT+TGG | + | chr3.3:40991307-40991326 | MS.gene88652:CDS | 45.0% |
| !! | TTTCTAGAAGCACCATACCC+AGG | - | chr3.3:40993198-40993217 | None:intergenic | 45.0% |
| !! | TTTGCAGAGGTGTTGAGTAC+CGG | + | chr3.3:40993582-40993601 | MS.gene88652:CDS | 45.0% |
| !!! | AGTGGCAGTGCCACTTTTAT+AGG | - | chr3.3:40989924-40989943 | None:intergenic | 45.0% |
| !!! | GCAGGTTTTTCTAGAGCTGA+TGG | + | chr3.3:40992669-40992688 | MS.gene88652:CDS | 45.0% |
| !!! | TCACCCTCATGCACTGATTT+TGG | - | chr3.3:40993276-40993295 | None:intergenic | 45.0% |
| AACAGATACAGCAGAGGGCT+GGG | + | chr3.3:40995107-40995126 | MS.gene88652:CDS | 50.0% | |
| ACCACCAAAAGCCCTTCTTG+AGG | - | chr3.3:40993232-40993251 | None:intergenic | 50.0% | |
| ACTGCCTCTCTAGCAGTGAT+TGG | + | chr3.3:40991267-40991286 | MS.gene88652:CDS | 50.0% | |
| AGAAAGCAGCAATGCCCATC+CGG | + | chr3.3:40993322-40993341 | MS.gene88652:CDS | 50.0% | |
| AGCAACCCGAATTGCTTCCA+AGG | - | chr3.3:40993403-40993422 | None:intergenic | 50.0% | |
| AGTGCATGAGGGTGATCAAG+GGG | + | chr3.3:40993281-40993300 | MS.gene88652:CDS | 50.0% | |
| ATCATCTGGCCGTAGATTCG+AGG | + | chr3.3:40992987-40993006 | MS.gene88652:CDS | 50.0% | |
| ATCTGACATGCCTGAGGGTT+GGG | + | chr3.3:40993167-40993186 | MS.gene88652:CDS | 50.0% | |
| ATGGAGATCTGACATGCCTG+AGG | + | chr3.3:40993161-40993180 | MS.gene88652:CDS | 50.0% | |
| ATTGCAGTTGGCATCAGGCT+GGG | + | chr3.3:40995155-40995174 | MS.gene88652:CDS | 50.0% | |
| CAGCCAATTCTTACTGGAGC+AGG | + | chr3.3:40993698-40993717 | MS.gene88652:CDS | 50.0% | |
| CAGTGCATGAGGGTGATCAA+GGG | + | chr3.3:40993280-40993299 | MS.gene88652:CDS | 50.0% | |
| CGAGATCTTCGAGTGCGATT+TGG | - | chr3.3:40988719-40988738 | None:intergenic | 50.0% | |
| CGAGCTGTGTTAACTGTCTC+TGG | - | chr3.3:40992743-40992762 | None:intergenic | 50.0% | |
| CGAGTATCAATTGCAGGCTG+GGG | + | chr3.3:40991199-40991218 | MS.gene88652:intron | 50.0% | |
| CGCTTCAACAGATACAGCAG+AGG | + | chr3.3:40995101-40995120 | MS.gene88652:CDS | 50.0% | |
| CGGATGATCCCTCGAATCTA+CGG | - | chr3.3:40992999-40993018 | None:intergenic | 50.0% | |
| CGTAGATTCGAGGGATCATC+CGG | + | chr3.3:40992997-40993016 | MS.gene88652:CDS | 50.0% | |
| CTGCCTCTCTAGCAGTGATT+GGG | + | chr3.3:40991268-40991287 | MS.gene88652:CDS | 50.0% | |
| GAAACAGACTGCGTGTTAGG+AGG | - | chr3.3:40994434-40994453 | None:intergenic | 50.0% | |
| GAAGGGTTTCAACGACTCCT+TGG | + | chr3.3:40993971-40993990 | MS.gene88652:intron | 50.0% | |
| GACAAGAGAGGGATGCAATC+TGG | + | chr3.3:40993505-40993524 | MS.gene88652:CDS | 50.0% | |
| GCCCACAGTGACATTACTTG+AGG | + | chr3.3:40991367-40991386 | MS.gene88652:CDS | 50.0% | |
| GGAACAGAATAAGGCTGTGC+AGG | + | chr3.3:40989085-40989104 | MS.gene88652:CDS | 50.0% | |
| GGACTAACCTTCCTCTTTGG+AGG | + | chr3.3:40994260-40994279 | MS.gene88652:intron | 50.0% | |
| GGATCAGTCTTCCTCTCATC+AGG | - | chr3.3:40992147-40992166 | None:intergenic | 50.0% | |
| GGCAATTGCACCACAAAGCT+TGG | + | chr3.3:40991220-40991239 | MS.gene88652:CDS | 50.0% | |
| GGCATGTCAGATCTCCATGA+TGG | - | chr3.3:40993159-40993178 | None:intergenic | 50.0% | |
| GGGATGCAATCTGGACTTCT+TGG | + | chr3.3:40993514-40993533 | MS.gene88652:CDS | 50.0% | |
| GGGTGGATCTCATGATAGCA+TGG | + | chr3.3:40992897-40992916 | MS.gene88652:CDS | 50.0% | |
| GGTACTCAACACCTCTGCAA+AGG | - | chr3.3:40993583-40993602 | None:intergenic | 50.0% | |
| GTGCCTAATGATGGCTTCCA+TGG | + | chr3.3:40992459-40992478 | MS.gene88652:CDS | 50.0% | |
| TATTGCAGTTGGCATCAGGC+TGG | + | chr3.3:40995154-40995173 | MS.gene88652:CDS | 50.0% | |
| TCAGTGCATGAGGGTGATCA+AGG | + | chr3.3:40993279-40993298 | MS.gene88652:CDS | 50.0% | |
| TCATCTGGCCGTAGATTCGA+GGG | + | chr3.3:40992988-40993007 | MS.gene88652:CDS | 50.0% | |
| TCTGTCATGCTATCCCTCAC+AGG | - | chr3.3:40991905-40991924 | None:intergenic | 50.0% | |
| TGGAATAGCGTCTGGTGTGA+GGG | - | chr3.3:40988757-40988776 | None:intergenic | 50.0% | |
| TGGAGATCTGACATGCCTGA+GGG | + | chr3.3:40993162-40993181 | MS.gene88652:CDS | 50.0% | |
| TGTGAGGGATAGCATGACAG+AGG | + | chr3.3:40991904-40991923 | MS.gene88652:CDS | 50.0% | |
| TTCTCGGATTATGCGTGTCC+CGG | + | chr3.3:40989634-40989653 | MS.gene88652:intron | 50.0% | |
| TTGCCCAATCACTGCTAGAG+AGG | - | chr3.3:40991274-40991293 | None:intergenic | 50.0% | |
| TTGGAATAGCGTCTGGTGTG+AGG | - | chr3.3:40988758-40988777 | None:intergenic | 50.0% | |
| TTGGGCAACACGTAAAGCAG+CGG | + | chr3.3:40991286-40991305 | MS.gene88652:CDS | 50.0% | |
| ! | AAGCCGTTGTTTGAGGCGAT+GGG | + | chr3.3:40989062-40989081 | MS.gene88652:CDS | 50.0% |
| ! | ATACTTGCTAGAAGGCCGAC+CGG | - | chr3.3:40993019-40993038 | None:intergenic | 50.0% |
| ! | ATGACAGTGCTGGACAAGAG+AGG | + | chr3.3:40993493-40993512 | MS.gene88652:CDS | 50.0% |
| ! | CCGCCTCCTTTTATGTCTTG+AGG | - | chr3.3:40991592-40991611 | None:intergenic | 50.0% |
| ! | CGATACTTTTGGCGTTCCCA+TGG | + | chr3.3:40995044-40995063 | MS.gene88652:CDS | 50.0% |
| ! | CTGAGGGTTGGGATTTTCCT+GGG | + | chr3.3:40993178-40993197 | MS.gene88652:CDS | 50.0% |
| ! | GGTTGGGATTTTCCTGGGTA+TGG | + | chr3.3:40993183-40993202 | MS.gene88652:CDS | 50.0% |
| ! | TAAGGCAGCGATTTTGCCTG+TGG | + | chr3.3:40989253-40989272 | MS.gene88652:CDS | 50.0% |
| ! | TCCTCAAGAAGGGCTTTTGG+TGG | + | chr3.3:40993228-40993247 | MS.gene88652:CDS | 50.0% |
| ! | TGACAGTGCTGGACAAGAGA+GGG | + | chr3.3:40993494-40993513 | MS.gene88652:CDS | 50.0% |
| ! | TGGAGGACTGGCATACTGTT+AGG | + | chr3.3:40994110-40994129 | MS.gene88652:intron | 50.0% |
| !! | ATCTTCTGAAACGCACCGAC+CGG | - | chr3.3:40989188-40989207 | None:intergenic | 50.0% |
| !! | ATGGGAATGCTTTGGGGATG+AGG | + | chr3.3:40993124-40993143 | MS.gene88652:CDS | 50.0% |
| !! | TACAAGTGTCGGTGTCGTGT+CGG | - | chr3.3:40989669-40989688 | None:intergenic | 50.0% |
| !! | TGACAGAGGCATTAGACCTG+TGG | + | chr3.3:40991918-40991937 | MS.gene88652:CDS | 50.0% |
| !! | TGGGAACGCCAAAAGTATCG+GGG | - | chr3.3:40995044-40995063 | None:intergenic | 50.0% |
| !! | TGGGAATGCTTTGGGGATGA+GGG | + | chr3.3:40993125-40993144 | MS.gene88652:CDS | 50.0% |
| !! | TTGGAAGCAATTCGGGTTGC+TGG | + | chr3.3:40993402-40993421 | MS.gene88652:CDS | 50.0% |
| AACACGTAAAGCAGCGGCAG+AGG | + | chr3.3:40991292-40991311 | MS.gene88652:CDS | 55.0% | |
| AATGACGGCTGCTGTGGAAG+AGG | + | chr3.3:40989142-40989161 | MS.gene88652:CDS | 55.0% | |
| ACGGATATGGACACGGACAC+CGG | - | chr3.3:40989759-40989778 | None:intergenic | 55.0% | |
| AGCGGCTAGCATCTCAGAGA+AGG | + | chr3.3:40992224-40992243 | MS.gene88652:CDS | 55.0% | |
| AGGTGAGGTGAAGCGGAATG+GGG | - | chr3.3:40988876-40988895 | None:intergenic | 55.0% | |
| ATGACGGCTGCTGTGGAAGA+GGG | + | chr3.3:40989143-40989162 | MS.gene88652:CDS | 55.0% | |
| CAACAGATACAGCAGAGGGC+TGG | + | chr3.3:40995106-40995125 | MS.gene88652:CDS | 55.0% | |
| CAGAATAAGGCTGTGCAGGG+TGG | + | chr3.3:40989089-40989108 | MS.gene88652:CDS | 55.0% | |
| CCAGGAAAATCCCAACCCTC+AGG | - | chr3.3:40993180-40993199 | None:intergenic | 55.0% | |
| CGAGGAACAACCACTTCCAC+TGG | - | chr3.3:40992348-40992367 | None:intergenic | 55.0% | |
| GACGCGTGTCGTGATTCGAT+TGG | + | chr3.3:40988954-40988973 | MS.gene88652:CDS | 55.0% | |
| GAGGTGAGGTGAAGCGGAAT+GGG | - | chr3.3:40988877-40988896 | None:intergenic | 55.0% | |
| GATCTGACATGCCTGAGGGT+TGG | + | chr3.3:40993166-40993185 | MS.gene88652:CDS | 55.0% | |
| GATTATGCGTGTCCCGGTGT+CGG | + | chr3.3:40989640-40989659 | MS.gene88652:intron | 55.0% | |
| GATTCGAGGGATCATCCGGT+CGG | + | chr3.3:40993001-40993020 | MS.gene88652:CDS | 55.0% | |
| GCAATGGCTGATGACAGTGC+TGG | + | chr3.3:40993483-40993502 | MS.gene88652:CDS | 55.0% | |
| GCATTCGATGCCCTTCAAGC+AGG | + | chr3.3:40993543-40993562 | MS.gene88652:CDS | 55.0% | |
| GCGGTCGGAGAGTTTAGAGA+GGG | - | chr3.3:40988688-40988707 | None:intergenic | 55.0% | |
| GGCGATGGGGGAACAGAATA+AGG | + | chr3.3:40989076-40989095 | MS.gene88652:CDS | 55.0% | |
| GTCGGAGAGTTTAGAGAGGG+AGG | - | chr3.3:40988685-40988704 | None:intergenic | 55.0% | |
| GTGCATGAGGGTGATCAAGG+GGG | + | chr3.3:40993282-40993301 | MS.gene88652:CDS | 55.0% | |
| TCCCCCATCGCCTCAAACAA+CGG | - | chr3.3:40989068-40989087 | None:intergenic | 55.0% | |
| TGGCGTTCCCATGGAAGTGA+AGG | + | chr3.3:40995053-40995072 | MS.gene88652:CDS | 55.0% | |
| TTTGGGGAGGTGAGGTGAAG+CGG | - | chr3.3:40988883-40988902 | None:intergenic | 55.0% | |
| ! | AGCCGTTGTTTGAGGCGATG+GGG | + | chr3.3:40989063-40989082 | MS.gene88652:CDS | 55.0% |
| ! | CCTGAGGGTTGGGATTTTCC+TGG | + | chr3.3:40993177-40993196 | MS.gene88652:CDS | 55.0% |
| ! | CTTTGGGGATGAGGGGAAGA+GGG | + | chr3.3:40993133-40993152 | MS.gene88652:CDS | 55.0% |
| ! | GAAGCCGTTGTTTGAGGCGA+TGG | + | chr3.3:40989061-40989080 | MS.gene88652:CDS | 55.0% |
| ! | GGAGGGTTTAGGGTCGGAAA+CGG | - | chr3.3:40988805-40988824 | None:intergenic | 55.0% |
| !! | CTCTGAGATGCTAGCCGCTT+TGG | - | chr3.3:40992223-40992242 | None:intergenic | 55.0% |
| !! | GATTTGGTGTGTGTCGCGGT+CGG | - | chr3.3:40988703-40988722 | None:intergenic | 55.0% |
| !! | GGCCCTCTGCAAGAAGTGTT+TGG | + | chr3.3:40993355-40993374 | MS.gene88652:CDS | 55.0% |
| !! | GGGAATGCTTTGGGGATGAG+GGG | + | chr3.3:40993126-40993145 | MS.gene88652:CDS | 55.0% |
| !! | GTGCGATTTGGTGTGTGTCG+CGG | - | chr3.3:40988707-40988726 | None:intergenic | 55.0% |
| !! | TGAGGCTTGTCGGGTTGACA+AGG | + | chr3.3:40991385-40991404 | MS.gene88652:CDS | 55.0% |
| ACGACACGCGTCACGAGAAG+CGG | - | chr3.3:40988946-40988965 | None:intergenic | 60.0% | |
| CGCGGTCGGAGAGTTTAGAG+AGG | - | chr3.3:40988689-40988708 | None:intergenic | 60.0% | |
| CGGGTTGCTGGCGAAGACAA+TGG | + | chr3.3:40993414-40993433 | MS.gene88652:CDS | 60.0% | |
| GATACAGCAGAGGGCTGGGA+AGG | + | chr3.3:40995111-40995130 | MS.gene88652:CDS | 60.0% | |
| GGAGGTGAGGTGAAGCGGAA+TGG | - | chr3.3:40988878-40988897 | None:intergenic | 60.0% | |
| GGGGTGTGAAGAGCAGACGA+AGG | - | chr3.3:40988856-40988875 | None:intergenic | 60.0% | |
| GGGTGGTGCAGCGGTTTGTA+TGG | + | chr3.3:40989106-40989125 | MS.gene88652:CDS | 60.0% | |
| GGTGAGGTGAAGCGGAATGG+GGG | - | chr3.3:40988875-40988894 | None:intergenic | 60.0% | |
| GGTGGAAATGACGGCTGCTG+TGG | + | chr3.3:40989136-40989155 | MS.gene88652:CDS | 60.0% | |
| GTCAGTGTCCGTGTCGTGTC+CGG | + | chr3.3:40989737-40989756 | MS.gene88652:intron | 60.0% | |
| TGAGGGGAAGAGGGCCATCA+TGG | + | chr3.3:40993142-40993161 | MS.gene88652:CDS | 60.0% | |
| ! | GCCGTTGTTTGAGGCGATGG+GGG | + | chr3.3:40989064-40989083 | MS.gene88652:CDS | 60.0% |
| !! | AATGCCCATCCGGCTTGGTG+AGG | + | chr3.3:40993332-40993351 | MS.gene88652:CDS | 60.0% |
| !! | ATGCCCATCCGGCTTGGTGA+GGG | + | chr3.3:40993333-40993352 | MS.gene88652:CDS | 60.0% |
| !! | GCTTTGGGGATGAGGGGAAG+AGG | + | chr3.3:40993132-40993151 | MS.gene88652:CDS | 60.0% |
| AAGGGGGCAGCAGGAGAGCT+TGG | + | chr3.3:40993298-40993317 | MS.gene88652:CDS | 65.0% | |
| ACGGCTGCTGTGGAAGAGGG+CGG | + | chr3.3:40989146-40989165 | MS.gene88652:CDS | 65.0% | |
| AGGGGGCAGCAGGAGAGCTT+GGG | + | chr3.3:40993299-40993318 | MS.gene88652:CDS | 65.0% | |
| AGGGTGATCAAGGGGGCAGC+AGG | + | chr3.3:40993289-40993308 | MS.gene88652:CDS | 65.0% | |
| CACGGACACCGGACACGACA+CGG | - | chr3.3:40989748-40989767 | None:intergenic | 65.0% | |
| GCAGCAATGCCCATCCGGCT+TGG | + | chr3.3:40993327-40993346 | MS.gene88652:CDS | 65.0% | |
| TGTGGAAGAGGGCGGTGGTG+CGG | + | chr3.3:40989154-40989173 | MS.gene88652:CDS | 65.0% | |
| ! | GTCGTGTCGGTGTCCGACAC+CGG | - | chr3.3:40989656-40989675 | None:intergenic | 65.0% |
| ! | TCGTGTCGGTGTCCGACACC+GGG | - | chr3.3:40989655-40989674 | None:intergenic | 65.0% |
| !! | TGCCCATCCGGCTTGGTGAG+GGG | + | chr3.3:40993334-40993353 | MS.gene88652:CDS | 65.0% |
| CAGAGGGCCCCTCACCAAGC+CGG | - | chr3.3:40993344-40993363 | None:intergenic | 70.0% | |
| GCTGCTGTGGAAGAGGGCGG+TGG | + | chr3.3:40989149-40989168 | MS.gene88652:CDS | 70.0% | |
| GGCCCCTCACCAAGCCGGAT+GGG | - | chr3.3:40993339-40993358 | None:intergenic | 70.0% | |
| GGCTGTGCAGGGTGGTGCAG+CGG | + | chr3.3:40989097-40989116 | MS.gene88652:CDS | 70.0% | |
| GGAAGAGGGCGGTGGTGCGG+CGG | + | chr3.3:40989157-40989176 | MS.gene88652:CDS | 75.0% | |
| GGGCCCCTCACCAAGCCGGA+TGG | - | chr3.3:40993340-40993359 | None:intergenic | 75.0% | |
| ! | AGAGGGCGGTGGTGCGGCGG+TGG | + | chr3.3:40989160-40989179 | MS.gene88652:CDS | 80.0% |
| ! | CGGTGGTGCGGCGGTGGTGC+CGG | + | chr3.3:40989166-40989185 | MS.gene88652:CDS | 80.0% |
| !!! | GGTGCGGCGGTGGTGCCGGT+CGG | + | chr3.3:40989170-40989189 | MS.gene88652:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 40988654 | 40995206 | 40988654 | ID=MS.gene88652 |
| chr3.3 | mRNA | 40988654 | 40995206 | 40988654 | ID=MS.gene88652.t1;Parent=MS.gene88652 |
| chr3.3 | exon | 40988654 | 40989292 | 40988654 | ID=MS.gene88652.t1.exon1;Parent=MS.gene88652.t1 |
| chr3.3 | CDS | 40988654 | 40989292 | 40988654 | ID=cds.MS.gene88652.t1;Parent=MS.gene88652.t1 |
| chr3.3 | exon | 40991215 | 40991406 | 40991215 | ID=MS.gene88652.t1.exon2;Parent=MS.gene88652.t1 |
| chr3.3 | CDS | 40991215 | 40991406 | 40991215 | ID=cds.MS.gene88652.t1;Parent=MS.gene88652.t1 |
| chr3.3 | exon | 40991896 | 40991998 | 40991896 | ID=MS.gene88652.t1.exon3;Parent=MS.gene88652.t1 |
| chr3.3 | CDS | 40991896 | 40991998 | 40991896 | ID=cds.MS.gene88652.t1;Parent=MS.gene88652.t1 |
| chr3.3 | exon | 40992118 | 40992797 | 40992118 | ID=MS.gene88652.t1.exon4;Parent=MS.gene88652.t1 |
| chr3.3 | CDS | 40992118 | 40992797 | 40992118 | ID=cds.MS.gene88652.t1;Parent=MS.gene88652.t1 |
| chr3.3 | exon | 40992889 | 40993755 | 40992889 | ID=MS.gene88652.t1.exon5;Parent=MS.gene88652.t1 |
| chr3.3 | CDS | 40992889 | 40993755 | 40992889 | ID=cds.MS.gene88652.t1;Parent=MS.gene88652.t1 |
| chr3.3 | exon | 40995015 | 40995206 | 40995015 | ID=MS.gene88652.t1.exon6;Parent=MS.gene88652.t1 |
| chr3.3 | CDS | 40995015 | 40995206 | 40995015 | ID=cds.MS.gene88652.t1;Parent=MS.gene88652.t1 |
| Gene Sequence |
| Protein sequence |
