Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88656.t1 | XP_003610159.1 | 97.9 | 576 | 12 | 0 | 1 | 576 | 1 | 576 | 0.00E+00 | 1090.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88656.t1 | A2AJL3 | 45.5 | 573 | 286 | 7 | 1 | 571 | 1 | 549 | 6.8e-139 | 495.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88656.t1 | G7JD18 | 97.9 | 576 | 12 | 0 | 1 | 576 | 1 | 576 | 0.0e+00 | 1090.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene70673 | MS.gene88656 | PPI |
| MS.gene022347 | MS.gene88656 | PPI |
| MS.gene56912 | MS.gene88656 | PPI |
| MS.gene033288 | MS.gene88656 | PPI |
| MS.gene24749 | MS.gene88656 | PPI |
| MS.gene011327 | MS.gene88656 | PPI |
| MS.gene88656 | MS.gene48333 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88656.t1 | MTR_4g128640 | 97.743 | 576 | 13 | 0 | 1 | 576 | 1 | 576 | 0.0 | 1169 |
| MS.gene88656.t1 | MTR_4g128640 | 94.991 | 579 | 20 | 2 | 1 | 576 | 1 | 573 | 0.0 | 1102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88656.t1 | AT4G30310 | 79.930 | 573 | 113 | 1 | 6 | 576 | 7 | 579 | 0.0 | 977 |
| MS.gene88656.t1 | AT4G30310 | 79.098 | 488 | 94 | 1 | 6 | 493 | 7 | 486 | 0.0 | 827 |
| MS.gene88656.t1 | AT4G30310 | 81.128 | 461 | 85 | 1 | 118 | 576 | 1 | 461 | 0.0 | 806 |
| MS.gene88656.t1 | AT4G30310 | 80.610 | 459 | 81 | 1 | 118 | 576 | 1 | 451 | 0.0 | 798 |
Find 168 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTTTGGTGGTTGCATTTC+TGG | 0.088084 | 8.1:+4356643 | None:intergenic |
| GCTCTTGGGTGCTGCTATTC+TGG | 0.108620 | 8.1:-4351379 | MS.gene88656:CDS |
| CCTGGCCATCCTTTGGGTTC+TGG | 0.174434 | 8.1:-4354829 | MS.gene88656:CDS |
| CAGGAACATGCTGATATTAT+TGG | 0.193681 | 8.1:-4352568 | MS.gene88656:intron |
| GTGGGTGGGATGATGAGTTT+TGG | 0.198692 | 8.1:-4355779 | MS.gene88656:CDS |
| ATCTAACTTTCCAGCTTCTA+TGG | 0.200690 | 8.1:-4356081 | MS.gene88656:intron |
| CGCTTTCCCTGGCCATCCTT+TGG | 0.231526 | 8.1:-4354836 | MS.gene88656:CDS |
| GAGCAGAACCAAACCTTTAT+AGG | 0.233071 | 8.1:-4353238 | MS.gene88656:CDS |
| AATTGTTCATTCCTGGGATT+TGG | 0.236868 | 8.1:-4354303 | MS.gene88656:CDS |
| CTTTCCCTTGGAAGAATTAC+AGG | 0.242464 | 8.1:+4351411 | None:intergenic |
| ATTGTTCATTCCTGGGATTT+GGG | 0.242505 | 8.1:-4354302 | MS.gene88656:CDS |
| GCCACGGAATATCTCGTATT+TGG | 0.254528 | 8.1:+4350553 | None:intergenic |
| TTTGCACCACAGTTTGTAAA+TGG | 0.263446 | 8.1:-4355866 | MS.gene88656:CDS |
| CAGCAATGGTACCAGAATAT+TGG | 0.292707 | 8.1:-4353517 | MS.gene88656:CDS |
| GAGTGCTACTGGTGCATTAT+TGG | 0.296050 | 8.1:-4353477 | MS.gene88656:CDS |
| GAAGGACATCATGCTAAAAT+AGG | 0.301530 | 8.1:-4355729 | MS.gene88656:intron |
| AGCTGCATTCAGGGCTTTCA+TGG | 0.304897 | 8.1:+4351317 | None:intergenic |
| CATGTTCTTCCTGACTTTCA+TGG | 0.316014 | 8.1:-4353196 | MS.gene88656:CDS |
| TTCCGACAGCTCACCTGTTT+CGG | 0.328398 | 8.1:-4356791 | MS.gene88656:CDS |
| CGGAGCAAATTGTTCATTCC+TGG | 0.329096 | 8.1:-4354310 | MS.gene88656:CDS |
| AAGAAAATTTGCAAGAATCT+TGG | 0.330498 | 8.1:-4356054 | MS.gene88656:CDS |
| TTCAGTCAGGGCGCCTATAA+AGG | 0.331186 | 8.1:+4353225 | None:intergenic |
| CTCTTGGGTGCTGCTATTCT+GGG | 0.338717 | 8.1:-4351378 | MS.gene88656:CDS |
| GCTTTCCCTGGCCATCCTTT+GGG | 0.344709 | 8.1:-4354835 | MS.gene88656:CDS |
| ACACCTGACCAGCTGCATTC+AGG | 0.348731 | 8.1:+4351307 | None:intergenic |
| TGTAGATAGGGTTCTTTGAT+AGG | 0.353694 | 8.1:+4352593 | None:intergenic |
| CAAGAAGAAATGTGATAGTA+TGG | 0.357580 | 8.1:-4356750 | MS.gene88656:CDS |
| CAAAGAAATATAATAGCCTT+AGG | 0.362518 | 8.1:-4351344 | MS.gene88656:CDS |
| GCTCACCTGTTTCGGTTTCT+CGG | 0.363236 | 8.1:-4356783 | MS.gene88656:CDS |
| AAATCAAAAGGAGTTATCTA+TGG | 0.364935 | 8.1:-4353067 | MS.gene88656:CDS |
| AGCAATCTTCTACAGATATA+TGG | 0.367313 | 8.1:-4357013 | MS.gene88656:CDS |
| GATGCTCATGCTGGTGGCGT+GGG | 0.370406 | 8.1:-4354531 | MS.gene88656:CDS |
| TGGACCAGCGCGAGCGCTGC+CGG | 0.374993 | 8.1:+4357324 | None:intergenic |
| TGATACAGATTCCCGAGATA+TGG | 0.379808 | 8.1:-4355808 | MS.gene88656:CDS |
| GCATGTTCCTGAATGTAGAT+AGG | 0.380329 | 8.1:+4352580 | None:intergenic |
| TACAAGTAAATCACCTGTAT+TGG | 0.383130 | 8.1:-4356689 | MS.gene88656:CDS |
| CACCTGACCAGCTGCATTCA+GGG | 0.386795 | 8.1:+4351308 | None:intergenic |
| TAGAGAGCTGTTGTTCATAA+AGG | 0.387938 | 8.1:+4350531 | None:intergenic |
| CAGGAACTGGGTCTTGTGCC+AGG | 0.395078 | 8.1:-4354579 | MS.gene88656:CDS |
| GTTTGTAAATGGACATATCT+TGG | 0.395154 | 8.1:-4355855 | MS.gene88656:CDS |
| TGAGTGACTGGTTGTCATAC+AGG | 0.406255 | 8.1:-4356006 | MS.gene88656:intron |
| GATGTCCCAACAGGAATTCC+TGG | 0.413797 | 8.1:+4354561 | None:intergenic |
| TGAGCTTCTGAACAAGCTCT+TGG | 0.422616 | 8.1:-4353275 | MS.gene88656:CDS |
| GAACATGTAAATCTTCAGTC+AGG | 0.427767 | 8.1:+4353212 | None:intergenic |
| CTAGCAGCCCGATACAGATA+TGG | 0.427837 | 8.1:-4357184 | MS.gene88656:CDS |
| TTTGCAAGAATCTTGGTCAA+TGG | 0.433970 | 8.1:-4356047 | MS.gene88656:CDS |
| TGGTACTTCTACATGTCATA+TGG | 0.435110 | 8.1:-4354341 | MS.gene88656:CDS |
| TTCCTGACTTTCATGGGAAT+AGG | 0.435627 | 8.1:-4353189 | MS.gene88656:intron |
| GATGAGGAAGGAAAGCTTCT+CGG | 0.436211 | 8.1:-4357212 | MS.gene88656:CDS |
| CCATCTTTCCATATCTGTAT+CGG | 0.442697 | 8.1:+4357176 | None:intergenic |
| ACCTACAGAAGTACAGAGTC+TGG | 0.443527 | 8.1:-4356940 | MS.gene88656:CDS |
| CCAGAACCCAAAGGATGGCC+AGG | 0.443578 | 8.1:+4354829 | None:intergenic |
| GGCACCGGCAGCGCTCGCGC+TGG | 0.448012 | 8.1:-4357328 | MS.gene88656:intron |
| ACCCACAAGCTTCCATATCT+CGG | 0.448292 | 8.1:+4355796 | None:intergenic |
| CCTTCAGTAAGCCAATATTC+TGG | 0.454185 | 8.1:+4353506 | None:intergenic |
| GGAAAGTGAATCTGTGCTCT+TGG | 0.455346 | 8.1:-4351394 | MS.gene88656:CDS |
| TACCTATTCCCATGAAAGTC+AGG | 0.457567 | 8.1:+4353187 | None:intergenic |
| ATGTTCTTCCTGACTTTCAT+GGG | 0.458051 | 8.1:-4353195 | MS.gene88656:CDS |
| GACAACCTTCAGTTTCTGAT+GGG | 0.462804 | 8.1:+4354490 | None:intergenic |
| TTGTGCCAGGAATTCCTGTT+GGG | 0.464564 | 8.1:-4354566 | MS.gene88656:CDS |
| AGCCCTGAATGCAGCTGGTC+AGG | 0.465495 | 8.1:-4351310 | MS.gene88656:intron |
| TTCTGTGATGGCTCAGGCGT+TGG | 0.466708 | 8.1:-4350504 | MS.gene88656:CDS |
| GGAGCAAATTGTTCATTCCT+GGG | 0.468555 | 8.1:-4354309 | MS.gene88656:CDS |
| AGTTCTAACGGTACCTTTGG+TGG | 0.470780 | 8.1:+4356631 | None:intergenic |
| CCACTCCGAGAAACCGAAAC+AGG | 0.474301 | 8.1:+4356778 | None:intergenic |
| GGGCGAAGTGTCGCTTTCCC+TGG | 0.475188 | 8.1:-4354847 | MS.gene88656:CDS |
| GGAGCGAGAAGCAGAAGGTT+CGG | 0.475193 | 8.1:+4357372 | None:intergenic |
| TCAGGGCGCCTATAAAGGTT+TGG | 0.475718 | 8.1:+4353230 | None:intergenic |
| ACTGTGCAGGGCATTGCATA+TGG | 0.476650 | 8.1:-4352995 | MS.gene88656:CDS |
| AACCGTATGGTGTTAGTTTG+TGG | 0.476840 | 8.1:-4354361 | MS.gene88656:CDS |
| AGCAGAAGGTTCGGTGGGAG+AGG | 0.479426 | 8.1:+4357381 | None:intergenic |
| CAGGAATGAACAATTTGCTC+CGG | 0.480068 | 8.1:+4354311 | None:intergenic |
| CCCGAGATATGGAAGCTTGT+GGG | 0.481065 | 8.1:-4355797 | MS.gene88656:CDS |
| CCTTCGCTGCAGTAGGAGTA+AGG | 0.484393 | 8.1:+4354806 | None:intergenic |
| TGACACAAGTGATCAACAAT+TGG | 0.484665 | 8.1:-4353035 | MS.gene88656:CDS |
| CTCGGCGTCGACGTCGGCAC+CGG | 0.486914 | 8.1:-4357343 | MS.gene88656:CDS |
| GAAGGCGGGCAGAGTGCTAC+TGG | 0.487058 | 8.1:-4353488 | MS.gene88656:CDS |
| GGACAACCTTCAGTTTCTGA+TGG | 0.487406 | 8.1:+4354489 | None:intergenic |
| AGCACAGATTCACTTTCCCT+TGG | 0.488663 | 8.1:+4351399 | None:intergenic |
| ATTTGCAAGGTGTATAGAAC+CGG | 0.490689 | 8.1:+4353433 | None:intergenic |
| CATCTTTCCATATCTGTATC+GGG | 0.490835 | 8.1:+4357177 | None:intergenic |
| TTGTTCATTCCTGGGATTTG+GGG | 0.492785 | 8.1:-4354301 | MS.gene88656:CDS |
| TCTAACTTTCCAGCTTCTAT+GGG | 0.496091 | 8.1:-4356080 | MS.gene88656:intron |
| TCAATCAATGATGTCCCAAC+AGG | 0.497590 | 8.1:+4354552 | None:intergenic |
| GGGCTTTCATGGCCTCCCTA+AGG | 0.499701 | 8.1:+4351328 | None:intergenic |
| CCTGTTTCGGTTTCTCGGAG+TGG | 0.501459 | 8.1:-4356778 | MS.gene88656:CDS |
| TGATGCTCATGCTGGTGGCG+TGG | 0.503744 | 8.1:-4354532 | MS.gene88656:CDS |
| CTTGTGCCAGGAATTCCTGT+TGG | 0.504324 | 8.1:-4354567 | MS.gene88656:CDS |
| GACGTCGACGCCGAGGAAGA+TGG | 0.505360 | 8.1:+4357351 | None:intergenic |
| ATGCTCATGCTGGTGGCGTG+GGG | 0.506408 | 8.1:-4354530 | MS.gene88656:CDS |
| CCACCACAGTATTCCAATAC+AGG | 0.506731 | 8.1:+4356676 | None:intergenic |
| GAAAGTGAATCTGTGCTCTT+GGG | 0.508762 | 8.1:-4351393 | MS.gene88656:CDS |
| TTGTATTGATCCTTTCAGCT+TGG | 0.509862 | 8.1:+4356707 | None:intergenic |
| CCCACAAGCTTCCATATCTC+GGG | 0.512125 | 8.1:+4355797 | None:intergenic |
| AAAGAAATATAATAGCCTTA+GGG | 0.515674 | 8.1:-4351343 | MS.gene88656:CDS |
| GGTGGATGGATTTGAGTGAC+TGG | 0.517100 | 8.1:-4356018 | MS.gene88656:CDS |
| AAAGAACCCTATCTACATTC+AGG | 0.526921 | 8.1:-4352587 | MS.gene88656:CDS |
| CATCCTTACTTTGTGACCAT+GGG | 0.529335 | 8.1:+4352943 | None:intergenic |
| CATGTTCCTGAATGTAGATA+GGG | 0.529832 | 8.1:+4352581 | None:intergenic |
| AAGAAATGTGATAGTATGGA+TGG | 0.531924 | 8.1:-4356746 | MS.gene88656:CDS |
| TAATCGTTCTGTGATGGCTC+AGG | 0.533125 | 8.1:-4350510 | MS.gene88656:CDS |
| ATTGCAGACCCAAAATCAAA+AGG | 0.535856 | 8.1:-4353079 | MS.gene88656:CDS |
| CGAGAAGCAGAAGGTTCGGT+GGG | 0.539421 | 8.1:+4357376 | None:intergenic |
| CAATGCCCTGCACAGTTGCT+AGG | 0.539531 | 8.1:+4353002 | None:intergenic |
| ATATCTCGTATTTGGCATCA+TGG | 0.543322 | 8.1:+4350561 | None:intergenic |
| TCTATACCTAGCAACTGTGC+AGG | 0.543459 | 8.1:-4353008 | MS.gene88656:CDS |
| ATGAAAGCCCTGAATGCAGC+TGG | 0.545563 | 8.1:-4351315 | MS.gene88656:CDS |
| GGTTTGGGTGATCTTGTTGA+AGG | 0.545633 | 8.1:-4355747 | MS.gene88656:CDS |
| GCATCCTTACTTTGTGACCA+TGG | 0.549525 | 8.1:+4352942 | None:intergenic |
| GGGAAGCAGCTCTATTTGCA+AGG | 0.553538 | 8.1:+4353420 | None:intergenic |
| CCTTACTCCTACTGCAGCGA+AGG | 0.555644 | 8.1:-4354806 | MS.gene88656:intron |
| TTCGCAGCTACTTGTTCACT+CGG | 0.559234 | 8.1:-4356915 | MS.gene88656:intron |
| AATATTGGCTTACTGAAGGC+GGG | 0.560778 | 8.1:-4353502 | MS.gene88656:CDS |
| GGAAGCAATTTGCAACCGTA+TGG | 0.561289 | 8.1:-4354374 | MS.gene88656:CDS |
| ATCTTCCTCGGCGTCGACGT+CGG | 0.564258 | 8.1:-4357349 | MS.gene88656:CDS |
| CATGTCATATGGCTGTATCC+CGG | 0.565315 | 8.1:-4354330 | MS.gene88656:CDS |
| GCGAGAAGCAGAAGGTTCGG+TGG | 0.565317 | 8.1:+4357375 | None:intergenic |
| GAATATTGGCTTACTGAAGG+CGG | 0.565847 | 8.1:-4353503 | MS.gene88656:CDS |
| AGGAATGAACAATTTGCTCC+GGG | 0.568276 | 8.1:+4354312 | None:intergenic |
| CCGATACAGATATGGAAAGA+TGG | 0.571912 | 8.1:-4357176 | MS.gene88656:CDS |
| GCTGCCCTGTAATTCTTCCA+AGG | 0.574853 | 8.1:-4351416 | MS.gene88656:CDS |
| GCTTCTCGCTCCATCTTCCT+CGG | 0.576028 | 8.1:-4357361 | MS.gene88656:CDS |
| CATATAATTGAAAACCATGC+CGG | 0.578445 | 8.1:-4353452 | MS.gene88656:CDS |
| ACCAGAAATGCAACCACCAA+AGG | 0.579084 | 8.1:-4356644 | MS.gene88656:intron |
| CAGAACCCAAAGGATGGCCA+GGG | 0.580895 | 8.1:+4354830 | None:intergenic |
| TCCCGAGATATGGAAGCTTG+TGG | 0.581118 | 8.1:-4355798 | MS.gene88656:CDS |
| CTGCCCTGTAATTCTTCCAA+GGG | 0.582030 | 8.1:-4351415 | MS.gene88656:CDS |
| TACCACAAACTAACACCATA+CGG | 0.584648 | 8.1:+4354359 | None:intergenic |
| TCATTGATTGATGCTCATGC+TGG | 0.585328 | 8.1:-4354540 | MS.gene88656:CDS |
| AGTAGTCTACCTGACCAAAA+CGG | 0.588840 | 8.1:+4354277 | None:intergenic |
| AACCGAAACAGGTGAGCTGT+CGG | 0.593045 | 8.1:+4356789 | None:intergenic |
| GCTCTCTAATCGTTCTGTGA+TGG | 0.593052 | 8.1:-4350516 | MS.gene88656:CDS |
| CAAGGTGTATAGAACCGGCA+TGG | 0.596311 | 8.1:+4353438 | None:intergenic |
| TGTTTATGAATTAGTTGCGG+TGG | 0.598795 | 8.1:-4356815 | MS.gene88656:intron |
| TGTTCATTCCTGGGATTTGG+GGG | 0.599170 | 8.1:-4354300 | MS.gene88656:CDS |
| GCAGGCTTGTTTGATGAGGA+AGG | 0.605646 | 8.1:-4357224 | MS.gene88656:intron |
| GAGATATGGAAGCTTGTGGG+TGG | 0.607291 | 8.1:-4355794 | MS.gene88656:CDS |
| CTATACCTAGCAACTGTGCA+GGG | 0.609843 | 8.1:-4353007 | MS.gene88656:CDS |
| TAAGGCCAGAACCCAAAGGA+TGG | 0.612845 | 8.1:+4354824 | None:intergenic |
| ATTCTTGCCTTCGCTGCAGT+AGG | 0.614851 | 8.1:+4354799 | None:intergenic |
| TGACATACTGCATGTGAGCA+TGG | 0.614970 | 8.1:+4355832 | None:intergenic |
| CGGTGCCGACGTCGACGCCG+AGG | 0.618580 | 8.1:+4357344 | None:intergenic |
| GAGCTGTAGACCAAGCTGAA+AGG | 0.619207 | 8.1:-4356717 | MS.gene88656:CDS |
| TGCTCATGCTGGTGGCGTGG+GGG | 0.620437 | 8.1:-4354529 | MS.gene88656:CDS |
| CCCAGACTCTGTACTTCTGT+AGG | 0.620897 | 8.1:+4356939 | None:intergenic |
| CCAGAATATTGGCTTACTGA+AGG | 0.621883 | 8.1:-4353506 | MS.gene88656:CDS |
| CAACCTTCAGTTTCTGATGG+GGG | 0.623501 | 8.1:+4354492 | None:intergenic |
| GTAGAGCATTGTAATGCCCA+TGG | 0.624269 | 8.1:-4352959 | MS.gene88656:CDS |
| ATCAACACATTACTTGCATG+TGG | 0.626073 | 8.1:-4352619 | MS.gene88656:CDS |
| GAAATATAATAGCCTTAGGG+AGG | 0.627076 | 8.1:-4351340 | MS.gene88656:CDS |
| ACAACCTTCAGTTTCTGATG+GGG | 0.628160 | 8.1:+4354491 | None:intergenic |
| ATATGTCCATTTACAAACTG+TGG | 0.629492 | 8.1:+4355860 | None:intergenic |
| TTGATTGATGCTCATGCTGG+TGG | 0.633063 | 8.1:-4354537 | MS.gene88656:CDS |
| GCCAAATACGAGATATTCCG+TGG | 0.634734 | 8.1:-4350554 | MS.gene88656:CDS |
| GGAGTAAGGCCAGAACCCAA+AGG | 0.635240 | 8.1:+4354820 | None:intergenic |
| GAAAGATGGTGCCTTTGTTG+AGG | 0.636370 | 8.1:-4357162 | MS.gene88656:intron |
| AACATGTAAATCTTCAGTCA+GGG | 0.637963 | 8.1:+4353213 | None:intergenic |
| CCTACAGAAGTACAGAGTCT+GGG | 0.640434 | 8.1:-4356939 | MS.gene88656:CDS |
| CGTATCCTCAGAGAATGACA+AGG | 0.648996 | 8.1:-4354395 | MS.gene88656:intron |
| TGATGCAGGCTTGTTTGATG+AGG | 0.653210 | 8.1:-4357228 | MS.gene88656:intron |
| CAAACAAGTTACCTCAACAA+AGG | 0.656353 | 8.1:+4357151 | None:intergenic |
| GCTGTTGTTCATAAAGGCCA+CGG | 0.660748 | 8.1:+4350537 | None:intergenic |
| TTTCCCTTGGAAGAATTACA+GGG | 0.661072 | 8.1:+4351412 | None:intergenic |
| AAGATGGAGCGAGAAGCAGA+AGG | 0.666509 | 8.1:+4357367 | None:intergenic |
| AACACATTACTTGCATGTGG+AGG | 0.667479 | 8.1:-4352616 | MS.gene88656:CDS |
| CCTGTATTGGAATACTGTGG+TGG | 0.701824 | 8.1:-4356676 | MS.gene88656:CDS |
| AGATATGGAAGCTTGTGGGT+GGG | 0.708937 | 8.1:-4355793 | MS.gene88656:CDS |
| TCACCTGTATTGGAATACTG+TGG | 0.766102 | 8.1:-4356679 | MS.gene88656:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 4350499 | 4357407 | 4350499 | ID=MS.gene88656 |
| chr8.1 | mRNA | 4350499 | 4357407 | 4350499 | ID=MS.gene88656.t1;Parent=MS.gene88656 |
| chr8.1 | exon | 4357329 | 4357407 | 4357329 | ID=MS.gene88656.t1.exon1;Parent=MS.gene88656.t1 |
| chr8.1 | CDS | 4357329 | 4357407 | 4357329 | ID=cds.MS.gene88656.t1;Parent=MS.gene88656.t1 |
| chr8.1 | exon | 4357163 | 4357242 | 4357163 | ID=MS.gene88656.t1.exon2;Parent=MS.gene88656.t1 |
| chr8.1 | CDS | 4357163 | 4357242 | 4357163 | ID=cds.MS.gene88656.t1;Parent=MS.gene88656.t1 |
| chr8.1 | exon | 4356916 | 4357033 | 4356916 | ID=MS.gene88656.t1.exon3;Parent=MS.gene88656.t1 |
| chr8.1 | CDS | 4356916 | 4357033 | 4356916 | ID=cds.MS.gene88656.t1;Parent=MS.gene88656.t1 |
| chr8.1 | exon | 4356645 | 4356823 | 4356645 | ID=MS.gene88656.t1.exon4;Parent=MS.gene88656.t1 |
| chr8.1 | CDS | 4356645 | 4356823 | 4356645 | ID=cds.MS.gene88656.t1;Parent=MS.gene88656.t1 |
| chr8.1 | exon | 4356007 | 4356089 | 4356007 | ID=MS.gene88656.t1.exon5;Parent=MS.gene88656.t1 |
| chr8.1 | CDS | 4356007 | 4356089 | 4356007 | ID=cds.MS.gene88656.t1;Parent=MS.gene88656.t1 |
| chr8.1 | exon | 4355730 | 4355914 | 4355730 | ID=MS.gene88656.t1.exon6;Parent=MS.gene88656.t1 |
| chr8.1 | CDS | 4355730 | 4355914 | 4355730 | ID=cds.MS.gene88656.t1;Parent=MS.gene88656.t1 |
| chr8.1 | exon | 4354807 | 4354868 | 4354807 | ID=MS.gene88656.t1.exon7;Parent=MS.gene88656.t1 |
| chr8.1 | CDS | 4354807 | 4354868 | 4354807 | ID=cds.MS.gene88656.t1;Parent=MS.gene88656.t1 |
| chr8.1 | exon | 4354496 | 4354598 | 4354496 | ID=MS.gene88656.t1.exon8;Parent=MS.gene88656.t1 |
| chr8.1 | CDS | 4354496 | 4354598 | 4354496 | ID=cds.MS.gene88656.t1;Parent=MS.gene88656.t1 |
| chr8.1 | exon | 4354287 | 4354406 | 4354287 | ID=MS.gene88656.t1.exon9;Parent=MS.gene88656.t1 |
| chr8.1 | CDS | 4354287 | 4354406 | 4354287 | ID=cds.MS.gene88656.t1;Parent=MS.gene88656.t1 |
| chr8.1 | exon | 4353417 | 4353536 | 4353417 | ID=MS.gene88656.t1.exon10;Parent=MS.gene88656.t1 |
| chr8.1 | CDS | 4353417 | 4353536 | 4353417 | ID=cds.MS.gene88656.t1;Parent=MS.gene88656.t1 |
| chr8.1 | exon | 4353190 | 4353310 | 4353190 | ID=MS.gene88656.t1.exon11;Parent=MS.gene88656.t1 |
| chr8.1 | CDS | 4353190 | 4353310 | 4353190 | ID=cds.MS.gene88656.t1;Parent=MS.gene88656.t1 |
| chr8.1 | exon | 4352952 | 4353108 | 4352952 | ID=MS.gene88656.t1.exon12;Parent=MS.gene88656.t1 |
| chr8.1 | CDS | 4352952 | 4353108 | 4352952 | ID=cds.MS.gene88656.t1;Parent=MS.gene88656.t1 |
| chr8.1 | exon | 4352569 | 4352641 | 4352569 | ID=MS.gene88656.t1.exon13;Parent=MS.gene88656.t1 |
| chr8.1 | CDS | 4352569 | 4352641 | 4352569 | ID=cds.MS.gene88656.t1;Parent=MS.gene88656.t1 |
| chr8.1 | exon | 4351311 | 4351438 | 4351311 | ID=MS.gene88656.t1.exon14;Parent=MS.gene88656.t1 |
| chr8.1 | CDS | 4351311 | 4351438 | 4351311 | ID=cds.MS.gene88656.t1;Parent=MS.gene88656.t1 |
| chr8.1 | exon | 4350499 | 4350621 | 4350499 | ID=MS.gene88656.t1.exon15;Parent=MS.gene88656.t1 |
| chr8.1 | CDS | 4350499 | 4350621 | 4350499 | ID=cds.MS.gene88656.t1;Parent=MS.gene88656.t1 |
| Gene Sequence |
| Protein sequence |
