Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88676.t1 | XP_003610125.1 | 97.2 | 635 | 18 | 0 | 1 | 635 | 1 | 635 | 0.00E+00 | 1190.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88676.t1 | G7JVG3 | 97.2 | 635 | 18 | 0 | 1 | 635 | 1 | 635 | 0.0e+00 | 1190.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054585 | MS.gene88676 | 0.803818 | 2.91E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88676.t1 | MTR_4g128210 | 98.583 | 635 | 9 | 0 | 1 | 635 | 1 | 635 | 0.0 | 1285 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88676.t1 | AT5G57460 | 70.167 | 657 | 163 | 7 | 1 | 635 | 1 | 646 | 0.0 | 931 |
Find 196 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACCAAGACCTTGAGGTTT+TGG | 0.220657 | 8.1:-4586697 | None:intergenic |
| GCTTGCAAGGGTTGGATTTA+TGG | 0.225612 | 8.1:+4586870 | MS.gene88676:CDS |
| ACCCTATTCAAAACAGCTTT+TGG | 0.236466 | 8.1:-4587264 | None:intergenic |
| GGGTGGTGCACTTGAGAATT+TGG | 0.254258 | 8.1:+4586774 | MS.gene88676:CDS |
| TATAGATCTCGGCGTATTTC+CGG | 0.256861 | 8.1:-4586042 | None:intergenic |
| GTCAATGGAGCAAGCAAATC+AGG | 0.275814 | 8.1:-4587186 | None:intergenic |
| AATTATGGTGGAGTTGAGTT+TGG | 0.277643 | 8.1:+4586577 | MS.gene88676:CDS |
| TCGGCGGTGTAGGCGTCTTC+GGG | 0.285949 | 8.1:-4585788 | None:intergenic |
| GGATGGTTCTTCCAATGATT+TGG | 0.294820 | 8.1:+4586465 | MS.gene88676:CDS |
| TTCGGCGGTGTAGGCGTCTT+CGG | 0.302627 | 8.1:-4585789 | None:intergenic |
| AAGCTCTTGAGGTTTGTTAA+TGG | 0.303944 | 8.1:-4586419 | None:intergenic |
| GGGTTGATAAAGAAATTAAA+TGG | 0.308442 | 8.1:+4587283 | MS.gene88676:CDS |
| CTTGCAAGGGTTGGATTTAT+GGG | 0.311528 | 8.1:+4586871 | MS.gene88676:CDS |
| AAGAAATTAGTGTAGAGTTC+AGG | 0.323061 | 8.1:+4586839 | MS.gene88676:CDS |
| GAGGGATTTGAAGGGAATTA+TGG | 0.323930 | 8.1:+4586562 | MS.gene88676:CDS |
| AGATCCGTGGTGCGGATAAT+TGG | 0.324547 | 8.1:+4586182 | MS.gene88676:CDS |
| ATCGTTTATCGTTTAGTTAA+CGG | 0.327877 | 8.1:+4585881 | MS.gene88676:CDS |
| TTCAATGATGCTTGGGGTGG+TGG | 0.340633 | 8.1:+4586637 | MS.gene88676:CDS |
| AGAATGGGATGTTTCATGTT+AGG | 0.347136 | 8.1:+4587025 | MS.gene88676:CDS |
| CTAAATTTCATAATCGGTAT+AGG | 0.357717 | 8.1:-4587066 | None:intergenic |
| CAATGATTTGGCTACAGCTT+TGG | 0.359152 | 8.1:+4586477 | MS.gene88676:CDS |
| TGAAGGTTTCAATGATGCTT+GGG | 0.365026 | 8.1:+4586630 | MS.gene88676:CDS |
| ATCCTTACTCTCAACCTTCC+AGG | 0.369883 | 8.1:-4587336 | None:intergenic |
| AATCTCTTCATTCTGTTCAC+TGG | 0.374724 | 8.1:-4586335 | None:intergenic |
| TTCAAAAGAGTTGGGTCAAC+TGG | 0.376136 | 8.1:-4587234 | None:intergenic |
| GAAATACGCCGAGATCTATA+TGG | 0.377614 | 8.1:+4586045 | MS.gene88676:CDS |
| AGCAAACTAAATTTCATAAT+CGG | 0.380999 | 8.1:-4587072 | None:intergenic |
| ATTCCATTGAAGGGCTCTCC+TGG | 0.384573 | 8.1:+4587318 | MS.gene88676:CDS |
| CATCTCAGGACCCTTCATTT+CGG | 0.384729 | 8.1:-4586806 | None:intergenic |
| TTGAAGGTTTCAATGATGCT+TGG | 0.405127 | 8.1:+4586629 | MS.gene88676:CDS |
| CCCTCCCCAGCTGTTCCCTT+AGG | 0.415069 | 8.1:-4586754 | None:intergenic |
| GTTGACACCTTTGCCTTTGA+GGG | 0.418383 | 8.1:+4587101 | MS.gene88676:CDS |
| CTCGATGCTTCGGAGTTTGT+GGG | 0.420118 | 8.1:+4586661 | MS.gene88676:CDS |
| GGTGGCTAGCCTTGCTGCTC+CGG | 0.425862 | 8.1:+4586309 | MS.gene88676:CDS |
| GGGTGGTGGACTCGATGCTT+CGG | 0.426803 | 8.1:+4586651 | MS.gene88676:CDS |
| TTCCCACCCTCACGCGCCCT+TGG | 0.428089 | 8.1:+4585698 | MS.gene88676:CDS |
| GGAGAAACCTTCAAAAGAGT+TGG | 0.428502 | 8.1:-4587243 | None:intergenic |
| AGTTGACACCTTTGCCTTTG+AGG | 0.428886 | 8.1:+4587100 | MS.gene88676:CDS |
| ACTCGATGCTTCGGAGTTTG+TGG | 0.429531 | 8.1:+4586660 | MS.gene88676:CDS |
| GTTAACGGAATCTACGTCCT+TGG | 0.433726 | 8.1:+4585896 | MS.gene88676:CDS |
| CTCCTGGAAGGTTGAGAGTA+AGG | 0.438582 | 8.1:+4587334 | MS.gene88676:CDS |
| GAGCCCTTCAATGGAATCTC+TGG | 0.440083 | 8.1:-4587312 | None:intergenic |
| CGAATGCGCGGCGCGTGTGG+CGG | 0.443035 | 8.1:-4585736 | None:intergenic |
| GTTCCCTTAGGTGCAACATC+TGG | 0.443331 | 8.1:-4586742 | None:intergenic |
| CAAAGCTGTAGCCAAATCAT+TGG | 0.443484 | 8.1:-4586476 | None:intergenic |
| TATTTCCGGCCGAGCTTCTC+CGG | 0.443535 | 8.1:-4586028 | None:intergenic |
| GGGATCGTCACCGATGGATT+CGG | 0.449077 | 8.1:-4585807 | None:intergenic |
| GAGAAACCTTCAAAAGAGTT+GGG | 0.449239 | 8.1:-4587242 | None:intergenic |
| GGAGTTGAGCTCTTGCAGAC+AGG | 0.454082 | 8.1:+4586718 | MS.gene88676:CDS |
| GGAATGGAACAAGCTTCAAT+TGG | 0.455650 | 8.1:+4586598 | MS.gene88676:CDS |
| CGGCGAATGCGCGGCGCGTG+TGG | 0.462672 | 8.1:-4585739 | None:intergenic |
| GTTGCACCTAAGGGAACAGC+TGG | 0.463294 | 8.1:+4586748 | MS.gene88676:CDS |
| TCTGTCTTTCCCTCCGAAGC+AGG | 0.466435 | 8.1:-4587462 | None:intergenic |
| GAATTCTCATTCCGAGTTGA+GGG | 0.468202 | 8.1:+4586949 | MS.gene88676:CDS |
| GATTGTGTTGCCTCCGGAGG+CGG | 0.470285 | 8.1:-4586523 | None:intergenic |
| ATAAATGTGGAGGGATTTGA+AGG | 0.471262 | 8.1:+4586553 | MS.gene88676:CDS |
| TGTGCCAGAGATTCCATTGA+AGG | 0.471503 | 8.1:+4587308 | MS.gene88676:CDS |
| GATTCAACAGAAACAGAAAC+AGG | 0.473687 | 8.1:+4586354 | MS.gene88676:CDS |
| CGTTGTCCGGAGTTTCTATA+CGG | 0.473729 | 8.1:+4587439 | MS.gene88676:CDS |
| AGGGCCAGATGTTGCACCTA+AGG | 0.477079 | 8.1:+4586738 | MS.gene88676:CDS |
| GGTGAAGAAAACCGAAATGA+AGG | 0.478452 | 8.1:+4586795 | MS.gene88676:CDS |
| GCACCAAAACCTCAAGGTCT+TGG | 0.479338 | 8.1:+4586694 | MS.gene88676:CDS |
| TGTTACTACATTGCCGCCTC+CGG | 0.480740 | 8.1:+4586510 | MS.gene88676:CDS |
| AGTTTCTATACGGCCTGCTT+CGG | 0.481532 | 8.1:+4587449 | MS.gene88676:CDS |
| AAGAAGGATATCGGATCCAT+TGG | 0.482401 | 8.1:-4585660 | None:intergenic |
| AACGATAAACGATGCGGTAA+CGG | 0.482907 | 8.1:-4585871 | None:intergenic |
| GCACCAAGGGCGCGTGAGGG+TGG | 0.482935 | 8.1:-4585701 | None:intergenic |
| CGTGTTAGTAGCCTTGAGAA+TGG | 0.483297 | 8.1:+4587009 | MS.gene88676:CDS |
| CTTCCAGGAGAGCCCTTCAA+TGG | 0.483886 | 8.1:-4587321 | None:intergenic |
| TTCAGTTTCTTTATCACCAT+CGG | 0.484150 | 8.1:-4586929 | None:intergenic |
| AGAAATTAGTGTAGAGTTCA+GGG | 0.488801 | 8.1:+4586840 | MS.gene88676:CDS |
| TTCTATACGGCCTGCTTCGG+AGG | 0.490922 | 8.1:+4587452 | MS.gene88676:CDS |
| TCATTCTGTTCACTGGTCAC+CGG | 0.494373 | 8.1:-4586328 | None:intergenic |
| GCGGGTTTGAAGAAGGATAT+CGG | 0.496609 | 8.1:-4585669 | None:intergenic |
| TCATCTTCGTTAGAATCTAC+TGG | 0.497953 | 8.1:-4587360 | None:intergenic |
| ATGGCATCACTAGCTGCAAA+TGG | 0.499705 | 8.1:-4586400 | None:intergenic |
| TGCGAGATTTGAATTGCCTC+AGG | 0.504918 | 8.1:+4586261 | MS.gene88676:CDS |
| TGAATTCTCATTCCGAGTTG+AGG | 0.507305 | 8.1:+4586948 | MS.gene88676:CDS |
| GACGTCACGCCGGAGAAGCT+CGG | 0.508903 | 8.1:+4586019 | MS.gene88676:CDS |
| CAAACAACTGAGACGTTGTC+CGG | 0.509867 | 8.1:+4587426 | MS.gene88676:CDS |
| TTGACCACTGGAAGCTGCGA+GGG | 0.511037 | 8.1:-4585828 | None:intergenic |
| CAAATGCATCGATGCTCGCT+TGG | 0.511922 | 8.1:-4586234 | None:intergenic |
| TCAGGGAATCACTGCTTGCA+AGG | 0.512019 | 8.1:+4586857 | MS.gene88676:CDS |
| AAGGGAACAGCTGGGGAGGG+TGG | 0.512697 | 8.1:+4586757 | MS.gene88676:CDS |
| AAGAGCACCAAGGGCGCGTG+AGG | 0.515076 | 8.1:-4585705 | None:intergenic |
| TGGTGCGGATAATTGGTCTT+CGG | 0.515688 | 8.1:+4586189 | MS.gene88676:CDS |
| GGATAATTGGTCTTCGGCGG+AGG | 0.516164 | 8.1:+4586195 | MS.gene88676:CDS |
| TGGTGGAGTTGAGTTTGGAA+TGG | 0.516645 | 8.1:+4586582 | MS.gene88676:CDS |
| GAATCACTGCTTGCAAGGGT+TGG | 0.517749 | 8.1:+4586862 | MS.gene88676:CDS |
| GAGTGGGTTTAAGAAGACTA+AGG | 0.518261 | 8.1:+4586444 | MS.gene88676:CDS |
| CAGCTTTCGTTCCCTCAACT+CGG | 0.520476 | 8.1:-4586960 | None:intergenic |
| ATCAAGAGCCATATAGATCT+CGG | 0.521232 | 8.1:-4586053 | None:intergenic |
| CGGTGATAGTATTGCTAAGA+TGG | 0.521917 | 8.1:+4586132 | MS.gene88676:CDS |
| TCCGACGATGACTTGACCAC+TGG | 0.525626 | 8.1:-4585840 | None:intergenic |
| GATGAAGAAATTGAGGTAGT+TGG | 0.527128 | 8.1:+4587384 | MS.gene88676:CDS |
| GGACGAGGTTGAAGTGGAAA+AGG | 0.529837 | 8.1:+4586375 | MS.gene88676:CDS |
| ATGAATGTAACATCAGTCAA+TGG | 0.529961 | 8.1:-4587201 | None:intergenic |
| CCAAAACCTCAAGGTCTTGG+TGG | 0.530093 | 8.1:+4586697 | MS.gene88676:CDS |
| CCTCAGGAGACGCTTGAAGC+CGG | 0.531327 | 8.1:+4586277 | MS.gene88676:CDS |
| GTGTTAGTAGCCTTGAGAAT+GGG | 0.532218 | 8.1:+4587010 | MS.gene88676:CDS |
| GACGTCAACGCCACGGCAAG+CGG | 0.534189 | 8.1:-4586002 | None:intergenic |
| GATTTGGCTACAGCTTTGGA+AGG | 0.534366 | 8.1:+4586481 | MS.gene88676:CDS |
| AGGATATCGGATCCATTGGT+TGG | 0.534539 | 8.1:-4585656 | None:intergenic |
| ACCGATGGATTCGGCGGTGT+AGG | 0.534631 | 8.1:-4585798 | None:intergenic |
| TCTTGGTTGCGGCGAATGCG+CGG | 0.534720 | 8.1:-4585748 | None:intergenic |
| GAAAGCGGAAAGAGCACCAA+GGG | 0.536250 | 8.1:-4585714 | None:intergenic |
| CCTAAGGGAACAGCTGGGGA+GGG | 0.538111 | 8.1:+4586754 | MS.gene88676:CDS |
| GAGTTGAGCTCTTGCAGACA+GGG | 0.540382 | 8.1:+4586719 | MS.gene88676:CDS |
| TCACGCCGGAGAAGCTCGGC+CGG | 0.540629 | 8.1:+4586023 | MS.gene88676:CDS |
| AACCCACTCACAAGCTCTTG+AGG | 0.541356 | 8.1:-4586430 | None:intergenic |
| ACCACTCGCGGGTTTGAAGA+AGG | 0.542202 | 8.1:-4585676 | None:intergenic |
| TCTTCCGAGATATACATCTC+AGG | 0.542576 | 8.1:-4586820 | None:intergenic |
| AGATGATGATGAAGAAATTG+AGG | 0.544041 | 8.1:+4587377 | MS.gene88676:CDS |
| AATGCATTCGAAAACATTGA+CGG | 0.546178 | 8.1:-4585945 | None:intergenic |
| ACCTAAGGGAACAGCTGGGG+AGG | 0.547322 | 8.1:+4586753 | MS.gene88676:CDS |
| CATTGAAGGGCTCTCCTGGA+AGG | 0.547855 | 8.1:+4587322 | MS.gene88676:CDS |
| TTTATAAGTCGAACCCTCAA+AGG | 0.548461 | 8.1:-4587114 | None:intergenic |
| CACCAAGGGCGCGTGAGGGT+GGG | 0.552767 | 8.1:-4585700 | None:intergenic |
| GTGAGGGTGGGAACCACTCG+CGG | 0.554649 | 8.1:-4585688 | None:intergenic |
| TTAGTCACAAACTTGAGAGT+GGG | 0.563058 | 8.1:+4587496 | MS.gene88676:CDS |
| GATGCTCGCTTGGTGTTCGA+CGG | 0.568371 | 8.1:-4586224 | None:intergenic |
| CAGGGAATCACTGCTTGCAA+GGG | 0.568503 | 8.1:+4586858 | MS.gene88676:CDS |
| GCCTACACCGCCGAATCCAT+CGG | 0.569549 | 8.1:+4585797 | MS.gene88676:CDS |
| GAAACAGGACGAGGTTGAAG+TGG | 0.571898 | 8.1:+4586369 | MS.gene88676:CDS |
| TGAGTCGATTGTGTTGCCTC+CGG | 0.572205 | 8.1:-4586529 | None:intergenic |
| TCTATACGGCCTGCTTCGGA+GGG | 0.576275 | 8.1:+4587453 | MS.gene88676:CDS |
| TGAGGGTGGGAACCACTCGC+GGG | 0.576384 | 8.1:-4585687 | None:intergenic |
| AAAGGCAAAGGTGTCAACTT+CGG | 0.579470 | 8.1:-4587096 | None:intergenic |
| GGGTCCTGAGATGTATATCT+CGG | 0.579735 | 8.1:+4586816 | MS.gene88676:CDS |
| GCGATGCTTGCCACAATGCA+CGG | 0.581124 | 8.1:+4586112 | MS.gene88676:CDS |
| GTGCCAGAGATTCCATTGAA+GGG | 0.583696 | 8.1:+4587309 | MS.gene88676:CDS |
| GGGTTTAAGAAGACTAAGGA+TGG | 0.584560 | 8.1:+4586448 | MS.gene88676:CDS |
| TGTTAGGACAGCGGCGTCAG+AGG | 0.591445 | 8.1:+4587041 | MS.gene88676:CDS |
| AGCAGGCCGTATAGAAACTC+CGG | 0.591774 | 8.1:-4587445 | None:intergenic |
| GGATTTGAAGGGAATTATGG+TGG | 0.591855 | 8.1:+4586565 | MS.gene88676:CDS |
| GAAGGTTTCAATGATGCTTG+GGG | 0.592536 | 8.1:+4586631 | MS.gene88676:CDS |
| GGTTTCAATGATGCTTGGGG+TGG | 0.593341 | 8.1:+4586634 | MS.gene88676:CDS |
| CATGAAACATCCCATTCTCA+AGG | 0.593984 | 8.1:-4587020 | None:intergenic |
| ATCGACTCATATAAATGTGG+AGG | 0.595297 | 8.1:+4586543 | MS.gene88676:CDS |
| TCAACTCCACCAAGACCTTG+AGG | 0.596281 | 8.1:-4586703 | None:intergenic |
| GCGGCGCGTGTGGCGGAAAG+CGG | 0.598180 | 8.1:-4585729 | None:intergenic |
| GGGCCAGATGTTGCACCTAA+GGG | 0.598749 | 8.1:+4586739 | MS.gene88676:CDS |
| TGCGAGGGGATCGTCACCGA+TGG | 0.598786 | 8.1:-4585813 | None:intergenic |
| GTCGATTGTGTTGCCTCCGG+AGG | 0.599262 | 8.1:-4586526 | None:intergenic |
| GATCCCCTCGCAGCTTCCAG+TGG | 0.599896 | 8.1:+4585824 | MS.gene88676:CDS |
| TACTACATTGCCGCCTCCGG+AGG | 0.600342 | 8.1:+4586513 | MS.gene88676:CDS |
| GATCGGCGACGGTTATTCCA+AGG | 0.603928 | 8.1:-4585913 | None:intergenic |
| GTTGTCGTCACCGCTTGCCG+TGG | 0.605132 | 8.1:+4585992 | MS.gene88676:CDS |
| TCCAGTGGTCAAGTCATCGT+CGG | 0.605539 | 8.1:+4585839 | MS.gene88676:CDS |
| TAGTCACAAACTTGAGAGTG+GGG | 0.607740 | 8.1:+4587497 | MS.gene88676:CDS |
| TCCTTCTTCAAACCCGCGAG+TGG | 0.610172 | 8.1:+4585675 | MS.gene88676:CDS |
| GGAGTTTGTGGGTCCAACCA+AGG | 0.612587 | 8.1:+4586672 | MS.gene88676:CDS |
| TTGCCACCTAAAAGTTCCGA+TGG | 0.614573 | 8.1:+4586913 | MS.gene88676:CDS |
| GCTAGCCACCACTTCATCAC+CGG | 0.615446 | 8.1:-4586296 | None:intergenic |
| AAACCTCAAGAGCTTGTGAG+TGG | 0.617162 | 8.1:+4586427 | MS.gene88676:CDS |
| GTTAGTCACAAACTTGAGAG+TGG | 0.619560 | 8.1:+4587495 | MS.gene88676:CDS |
| GGAGTTATCGTGATCGGCGA+CGG | 0.619899 | 8.1:-4585924 | None:intergenic |
| AGTCGAACCCTCAAAGGCAA+AGG | 0.619988 | 8.1:-4587108 | None:intergenic |
| TTGCACCTAAGGGAACAGCT+GGG | 0.620173 | 8.1:+4586749 | MS.gene88676:CDS |
| GTGAAGAAAACCGAAATGAA+GGG | 0.622972 | 8.1:+4586796 | MS.gene88676:CDS |
| AGAGCACCAAGGGCGCGTGA+GGG | 0.624103 | 8.1:-4585704 | None:intergenic |
| TCAATGGAGCAAGCAAATCA+GGG | 0.624425 | 8.1:-4587185 | None:intergenic |
| CGGCGGTGTAGGCGTCTTCG+GGG | 0.624996 | 8.1:-4585787 | None:intergenic |
| CCGGCGTGACGTCAACGCCA+CGG | 0.627417 | 8.1:-4586009 | None:intergenic |
| CTCTCTCTACAACCAACCAA+TGG | 0.628001 | 8.1:+4585644 | MS.gene88676:CDS |
| TCGACTTATAAAACGACACA+CGG | 0.628340 | 8.1:+4587125 | MS.gene88676:CDS |
| TGACCACTGGAAGCTGCGAG+GGG | 0.633198 | 8.1:-4585827 | None:intergenic |
| AACCTCAAGAGCTTGTGAGT+GGG | 0.636446 | 8.1:+4586428 | MS.gene88676:CDS |
| TGCGGATAATTGGTCTTCGG+CGG | 0.637961 | 8.1:+4586192 | MS.gene88676:CDS |
| ATTGACGGAGTTATCGTGAT+CGG | 0.638820 | 8.1:-4585930 | None:intergenic |
| CGACTTATAAAACGACACAC+GGG | 0.639207 | 8.1:+4587126 | MS.gene88676:CDS |
| TCGACTCATATAAATGTGGA+GGG | 0.639675 | 8.1:+4586544 | MS.gene88676:CDS |
| CACTGGTCACCGGAGCAGCA+AGG | 0.640543 | 8.1:-4586318 | None:intergenic |
| ACCAAGGCACCAAAACCTCA+AGG | 0.643811 | 8.1:+4586688 | MS.gene88676:CDS |
| AATACTATCACCGTGCATTG+TGG | 0.645257 | 8.1:-4586122 | None:intergenic |
| ATCGTCACCGATGGATTCGG+CGG | 0.649502 | 8.1:-4585804 | None:intergenic |
| TGCACCTAAGGGAACAGCTG+GGG | 0.655359 | 8.1:+4586750 | MS.gene88676:CDS |
| GCTTGAAGCCGGTGATGAAG+TGG | 0.656833 | 8.1:+4586288 | MS.gene88676:CDS |
| GGAAAGCGGAAAGAGCACCA+AGG | 0.659139 | 8.1:-4585715 | None:intergenic |
| CCGGCTTCAAGCGTCTCCTG+AGG | 0.659501 | 8.1:-4586277 | None:intergenic |
| ACAATCGACTCATATAAATG+TGG | 0.663324 | 8.1:+4586540 | MS.gene88676:CDS |
| CTTGACCACTGGAAGCTGCG+AGG | 0.667825 | 8.1:-4585829 | None:intergenic |
| AGAGAATAAGATCCGTGGTG+CGG | 0.672663 | 8.1:+4586174 | MS.gene88676:CDS |
| GCTCTTGATATTGTCCTCCG+TGG | 0.675594 | 8.1:+4586067 | MS.gene88676:CDS |
| CCGTGGCGTTGACGTCACGC+CGG | 0.675922 | 8.1:+4586009 | MS.gene88676:CDS |
| GACTTATAAAACGACACACG+GGG | 0.677322 | 8.1:+4587127 | MS.gene88676:CDS |
| GATGTTTCATGTTAGGACAG+CGG | 0.677369 | 8.1:+4587032 | MS.gene88676:CDS |
| TAAATGTGGAGGGATTTGAA+GGG | 0.679949 | 8.1:+4586554 | MS.gene88676:CDS |
| TGAAGCCGGTGATGAAGTGG+TGG | 0.680677 | 8.1:+4586291 | MS.gene88676:CDS |
| GATACAGAGAATAAGATCCG+TGG | 0.697089 | 8.1:+4586169 | MS.gene88676:CDS |
| GACGAATATTGCTAACACCA+CGG | 0.717778 | 8.1:-4586084 | None:intergenic |
| ACAGAAACAGAAACAGGACG+AGG | 0.718486 | 8.1:+4586360 | MS.gene88676:CDS |
| TAACTAAACGATAAACGATG+CGG | 0.725905 | 8.1:-4585877 | None:intergenic |
| AAGACCAATTATCCGCACCA+CGG | 0.728753 | 8.1:-4586186 | None:intergenic |
| GGGAAAGACAGACTTCTACG+AGG | 0.806695 | 8.1:+4587473 | MS.gene88676:CDS |
| GAATATTGCTAACACCACGG+AGG | 0.811549 | 8.1:-4586081 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGCAAACTAAATTTCATAAT+CGG | - | chr8.1:4587075-4587094 | None:intergenic | 20.0% |
| ! | ATCGTTTATCGTTTAGTTAA+CGG | + | chr8.1:4585881-4585900 | MS.gene88676:CDS | 25.0% |
| ! | CTAAATTTCATAATCGGTAT+AGG | - | chr8.1:4587069-4587088 | None:intergenic | 25.0% |
| !!! | GGGTTGATAAAGAAATTAAA+TGG | + | chr8.1:4587283-4587302 | MS.gene88676:CDS | 25.0% |
| AAGAAATTAGTGTAGAGTTC+AGG | + | chr8.1:4586839-4586858 | MS.gene88676:CDS | 30.0% | |
| AATGCATTCGAAAACATTGA+CGG | - | chr8.1:4585948-4585967 | None:intergenic | 30.0% | |
| AGAAATTAGTGTAGAGTTCA+GGG | + | chr8.1:4586840-4586859 | MS.gene88676:CDS | 30.0% | |
| ATGAATGTAACATCAGTCAA+TGG | - | chr8.1:4587204-4587223 | None:intergenic | 30.0% | |
| TAACTAAACGATAAACGATG+CGG | - | chr8.1:4585880-4585899 | None:intergenic | 30.0% | |
| TTCAGTTTCTTTATCACCAT+CGG | - | chr8.1:4586932-4586951 | None:intergenic | 30.0% | |
| ! | ACAATCGACTCATATAAATG+TGG | + | chr8.1:4586540-4586559 | MS.gene88676:CDS | 30.0% |
| ! | AGATGATGATGAAGAAATTG+AGG | + | chr8.1:4587377-4587396 | MS.gene88676:CDS | 30.0% |
| !! | TCCAAAAGCTGTTTTGAATA+GGG | + | chr8.1:4587263-4587282 | MS.gene88676:CDS | 30.0% |
| AATCTCTTCATTCTGTTCAC+TGG | - | chr8.1:4586338-4586357 | None:intergenic | 35.0% | |
| AGAATGGGATGTTTCATGTT+AGG | + | chr8.1:4587025-4587044 | MS.gene88676:CDS | 35.0% | |
| ATAAATGTGGAGGGATTTGA+AGG | + | chr8.1:4586553-4586572 | MS.gene88676:CDS | 35.0% | |
| ATCAAGAGCCATATAGATCT+CGG | - | chr8.1:4586056-4586075 | None:intergenic | 35.0% | |
| GAGAAACCTTCAAAAGAGTT+GGG | - | chr8.1:4587245-4587264 | None:intergenic | 35.0% | |
| GATGAAGAAATTGAGGTAGT+TGG | + | chr8.1:4587384-4587403 | MS.gene88676:CDS | 35.0% | |
| GATTCAACAGAAACAGAAAC+AGG | + | chr8.1:4586354-4586373 | MS.gene88676:CDS | 35.0% | |
| GTGAAGAAAACCGAAATGAA+GGG | + | chr8.1:4586796-4586815 | MS.gene88676:CDS | 35.0% | |
| TAAATGTGGAGGGATTTGAA+GGG | + | chr8.1:4586554-4586573 | MS.gene88676:CDS | 35.0% | |
| TCATCTTCGTTAGAATCTAC+TGG | - | chr8.1:4587363-4587382 | None:intergenic | 35.0% | |
| TCGACTCATATAAATGTGGA+GGG | + | chr8.1:4586544-4586563 | MS.gene88676:CDS | 35.0% | |
| TCGACTTATAAAACGACACA+CGG | + | chr8.1:4587125-4587144 | MS.gene88676:CDS | 35.0% | |
| TGAAGGTTTCAATGATGCTT+GGG | + | chr8.1:4586630-4586649 | MS.gene88676:CDS | 35.0% | |
| TTAGTCACAAACTTGAGAGT+GGG | + | chr8.1:4587496-4587515 | MS.gene88676:CDS | 35.0% | |
| TTGAAGGTTTCAATGATGCT+TGG | + | chr8.1:4586629-4586648 | MS.gene88676:CDS | 35.0% | |
| TTTATAAGTCGAACCCTCAA+AGG | - | chr8.1:4587117-4587136 | None:intergenic | 35.0% | |
| ! | AATTATGGTGGAGTTGAGTT+TGG | + | chr8.1:4586577-4586596 | MS.gene88676:CDS | 35.0% |
| ! | ACCCTATTCAAAACAGCTTT+TGG | - | chr8.1:4587267-4587286 | None:intergenic | 35.0% |
| ! | ATCGACTCATATAAATGTGG+AGG | + | chr8.1:4586543-4586562 | MS.gene88676:CDS | 35.0% |
| ! | TCAATTGGTGAAGCTTTTGA+AGG | + | chr8.1:4586613-4586632 | MS.gene88676:CDS | 35.0% |
| ! | TTATCACCATCGGAACTTTT+AGG | - | chr8.1:4586922-4586941 | None:intergenic | 35.0% |
| !! | AAGCTCTTGAGGTTTGTTAA+TGG | - | chr8.1:4586422-4586441 | None:intergenic | 35.0% |
| !! | CTCCAAAAGCTGTTTTGAAT+AGG | + | chr8.1:4587262-4587281 | MS.gene88676:CDS | 35.0% |
| !! | TTTTAGGTGGCAAAGTTTTG+AGG | - | chr8.1:4586906-4586925 | None:intergenic | 35.0% |
| !!! | GACGTTGTTTTTGTTGTTCT+TGG | - | chr8.1:4585768-4585787 | None:intergenic | 35.0% |
| !!! | GTTTTTGTTGTTCTTGGTTG+CGG | - | chr8.1:4585762-4585781 | None:intergenic | 35.0% |
| AACGATAAACGATGCGGTAA+CGG | - | chr8.1:4585874-4585893 | None:intergenic | 40.0% | |
| AAGAAGGATATCGGATCCAT+TGG | - | chr8.1:4585663-4585682 | None:intergenic | 40.0% | |
| AATACTATCACCGTGCATTG+TGG | - | chr8.1:4586125-4586144 | None:intergenic | 40.0% | |
| ATTGACGGAGTTATCGTGAT+CGG | - | chr8.1:4585933-4585952 | None:intergenic | 40.0% | |
| CAAAGCTGTAGCCAAATCAT+TGG | - | chr8.1:4586479-4586498 | None:intergenic | 40.0% | |
| CATGAAACATCCCATTCTCA+AGG | - | chr8.1:4587023-4587042 | None:intergenic | 40.0% | |
| CGACTTATAAAACGACACAC+GGG | + | chr8.1:4587126-4587145 | MS.gene88676:CDS | 40.0% | |
| CGGTGATAGTATTGCTAAGA+TGG | + | chr8.1:4586132-4586151 | MS.gene88676:CDS | 40.0% | |
| CTTGCAAGGGTTGGATTTAT+GGG | + | chr8.1:4586871-4586890 | MS.gene88676:CDS | 40.0% | |
| GAAATACGCCGAGATCTATA+TGG | + | chr8.1:4586045-4586064 | MS.gene88676:CDS | 40.0% | |
| GAAGGTTTCAATGATGCTTG+GGG | + | chr8.1:4586631-4586650 | MS.gene88676:CDS | 40.0% | |
| GACGAATATTGCTAACACCA+CGG | - | chr8.1:4586087-4586106 | None:intergenic | 40.0% | |
| GACTTATAAAACGACACACG+GGG | + | chr8.1:4587127-4587146 | MS.gene88676:CDS | 40.0% | |
| GAGGGATTTGAAGGGAATTA+TGG | + | chr8.1:4586562-4586581 | MS.gene88676:CDS | 40.0% | |
| GATACAGAGAATAAGATCCG+TGG | + | chr8.1:4586169-4586188 | MS.gene88676:CDS | 40.0% | |
| GATGTTTCATGTTAGGACAG+CGG | + | chr8.1:4587032-4587051 | MS.gene88676:CDS | 40.0% | |
| GGAATGGAACAAGCTTCAAT+TGG | + | chr8.1:4586598-4586617 | MS.gene88676:CDS | 40.0% | |
| GGAGAAACCTTCAAAAGAGT+TGG | - | chr8.1:4587246-4587265 | None:intergenic | 40.0% | |
| GGATGGTTCTTCCAATGATT+TGG | + | chr8.1:4586465-4586484 | MS.gene88676:CDS | 40.0% | |
| GGATTTGAAGGGAATTATGG+TGG | + | chr8.1:4586565-4586584 | MS.gene88676:CDS | 40.0% | |
| GGGTTTAAGAAGACTAAGGA+TGG | + | chr8.1:4586448-4586467 | MS.gene88676:CDS | 40.0% | |
| GGTGAAGAAAACCGAAATGA+AGG | + | chr8.1:4586795-4586814 | MS.gene88676:CDS | 40.0% | |
| GTTAGTCACAAACTTGAGAG+TGG | + | chr8.1:4587495-4587514 | MS.gene88676:CDS | 40.0% | |
| TAGTCACAAACTTGAGAGTG+GGG | + | chr8.1:4587497-4587516 | MS.gene88676:CDS | 40.0% | |
| TATAGATCTCGGCGTATTTC+CGG | - | chr8.1:4586045-4586064 | None:intergenic | 40.0% | |
| TCAATGGAGCAAGCAAATCA+GGG | - | chr8.1:4587188-4587207 | None:intergenic | 40.0% | |
| TCTTCCGAGATATACATCTC+AGG | - | chr8.1:4586823-4586842 | None:intergenic | 40.0% | |
| TGAATTCTCATTCCGAGTTG+AGG | + | chr8.1:4586948-4586967 | MS.gene88676:CDS | 40.0% | |
| TTCAAAAGAGTTGGGTCAAC+TGG | - | chr8.1:4587237-4587256 | None:intergenic | 40.0% | |
| ! | AGTTGACCCAACTCTTTTGA+AGG | + | chr8.1:4587236-4587255 | MS.gene88676:CDS | 40.0% |
| ! | CAATGATTTGGCTACAGCTT+TGG | + | chr8.1:4586477-4586496 | MS.gene88676:CDS | 40.0% |
| ! | GAATTCTCATTCCGAGTTGA+GGG | + | chr8.1:4586949-4586968 | MS.gene88676:CDS | 40.0% |
| ! | GAGTGGGTTTAAGAAGACTA+AGG | + | chr8.1:4586444-4586463 | MS.gene88676:CDS | 40.0% |
| ! | GTGTTAGTAGCCTTGAGAAT+GGG | + | chr8.1:4587010-4587029 | MS.gene88676:CDS | 40.0% |
| !! | AAAGGCAAAGGTGTCAACTT+CGG | - | chr8.1:4587099-4587118 | None:intergenic | 40.0% |
| AAACCTCAAGAGCTTGTGAG+TGG | + | chr8.1:4586427-4586446 | MS.gene88676:CDS | 45.0% | |
| AACCTCAAGAGCTTGTGAGT+GGG | + | chr8.1:4586428-4586447 | MS.gene88676:CDS | 45.0% | |
| AAGACCAATTATCCGCACCA+CGG | - | chr8.1:4586189-4586208 | None:intergenic | 45.0% | |
| ACAGAAACAGAAACAGGACG+AGG | + | chr8.1:4586360-4586379 | MS.gene88676:CDS | 45.0% | |
| AGAGAATAAGATCCGTGGTG+CGG | + | chr8.1:4586174-4586193 | MS.gene88676:CDS | 45.0% | |
| AGGATATCGGATCCATTGGT+TGG | - | chr8.1:4585659-4585678 | None:intergenic | 45.0% | |
| AGTTGACACCTTTGCCTTTG+AGG | + | chr8.1:4587100-4587119 | MS.gene88676:CDS | 45.0% | |
| AGTTTCTATACGGCCTGCTT+CGG | + | chr8.1:4587449-4587468 | MS.gene88676:CDS | 45.0% | |
| ATCCTTACTCTCAACCTTCC+AGG | - | chr8.1:4587339-4587358 | None:intergenic | 45.0% | |
| ATGGCATCACTAGCTGCAAA+TGG | - | chr8.1:4586403-4586422 | None:intergenic | 45.0% | |
| CAAACAACTGAGACGTTGTC+CGG | + | chr8.1:4587426-4587445 | MS.gene88676:CDS | 45.0% | |
| CATCTCAGGACCCTTCATTT+CGG | - | chr8.1:4586809-4586828 | None:intergenic | 45.0% | |
| CGTTGTCCGGAGTTTCTATA+CGG | + | chr8.1:4587439-4587458 | MS.gene88676:CDS | 45.0% | |
| CTCTCTCTACAACCAACCAA+TGG | + | chr8.1:4585644-4585663 | MS.gene88676:CDS | 45.0% | |
| GAATATTGCTAACACCACGG+AGG | - | chr8.1:4586084-4586103 | None:intergenic | 45.0% | |
| GCGGGTTTGAAGAAGGATAT+CGG | - | chr8.1:4585672-4585691 | None:intergenic | 45.0% | |
| GCTTGCAAGGGTTGGATTTA+TGG | + | chr8.1:4586870-4586889 | MS.gene88676:CDS | 45.0% | |
| GGGTCCTGAGATGTATATCT+CGG | + | chr8.1:4586816-4586835 | MS.gene88676:CDS | 45.0% | |
| GTCAATGGAGCAAGCAAATC+AGG | - | chr8.1:4587189-4587208 | None:intergenic | 45.0% | |
| GTGCCAGAGATTCCATTGAA+GGG | + | chr8.1:4587309-4587328 | MS.gene88676:CDS | 45.0% | |
| GTTAACGGAATCTACGTCCT+TGG | + | chr8.1:4585896-4585915 | MS.gene88676:CDS | 45.0% | |
| GTTGACACCTTTGCCTTTGA+GGG | + | chr8.1:4587101-4587120 | MS.gene88676:CDS | 45.0% | |
| TCATTCTGTTCACTGGTCAC+CGG | - | chr8.1:4586331-4586350 | None:intergenic | 45.0% | |
| TGCGAGATTTGAATTGCCTC+AGG | + | chr8.1:4586261-4586280 | MS.gene88676:CDS | 45.0% | |
| TGGTGGAGTTGAGTTTGGAA+TGG | + | chr8.1:4586582-4586601 | MS.gene88676:CDS | 45.0% | |
| TGTGCCAGAGATTCCATTGA+AGG | + | chr8.1:4587308-4587327 | MS.gene88676:CDS | 45.0% | |
| TTGCCACCTAAAAGTTCCGA+TGG | + | chr8.1:4586913-4586932 | MS.gene88676:CDS | 45.0% | |
| ! | CGTGTTAGTAGCCTTGAGAA+TGG | + | chr8.1:4587009-4587028 | MS.gene88676:CDS | 45.0% |
| ! | TCACCATCGGAACTTTTAGG+TGG | - | chr8.1:4586919-4586938 | None:intergenic | 45.0% |
| !! | GATTTGGCTACAGCTTTGGA+AGG | + | chr8.1:4586481-4586500 | MS.gene88676:CDS | 45.0% |
| !! | TGGTGCGGATAATTGGTCTT+CGG | + | chr8.1:4586189-4586208 | MS.gene88676:CDS | 45.0% |
| AACCCACTCACAAGCTCTTG+AGG | - | chr8.1:4586433-4586452 | None:intergenic | 50.0% | |
| ACTCGATGCTTCGGAGTTTG+TGG | + | chr8.1:4586660-4586679 | MS.gene88676:CDS | 50.0% | |
| AGATCCGTGGTGCGGATAAT+TGG | + | chr8.1:4586182-4586201 | MS.gene88676:CDS | 50.0% | |
| AGCAGGCCGTATAGAAACTC+CGG | - | chr8.1:4587448-4587467 | None:intergenic | 50.0% | |
| AGTCGAACCCTCAAAGGCAA+AGG | - | chr8.1:4587111-4587130 | None:intergenic | 50.0% | |
| ATTCCATTGAAGGGCTCTCC+TGG | + | chr8.1:4587318-4587337 | MS.gene88676:CDS | 50.0% | |
| CAGCTTTCGTTCCCTCAACT+CGG | - | chr8.1:4586963-4586982 | None:intergenic | 50.0% | |
| CAGGGAATCACTGCTTGCAA+GGG | + | chr8.1:4586858-4586877 | MS.gene88676:CDS | 50.0% | |
| CCAAAACCTCAAGGTCTTGG+TGG | + | chr8.1:4586697-4586716 | MS.gene88676:CDS | 50.0% | |
| CTCCTGGAAGGTTGAGAGTA+AGG | + | chr8.1:4587334-4587353 | MS.gene88676:CDS | 50.0% | |
| CTCGATGCTTCGGAGTTTGT+GGG | + | chr8.1:4586661-4586680 | MS.gene88676:CDS | 50.0% | |
| GAAACAGGACGAGGTTGAAG+TGG | + | chr8.1:4586369-4586388 | MS.gene88676:CDS | 50.0% | |
| GAATCACTGCTTGCAAGGGT+TGG | + | chr8.1:4586862-4586881 | MS.gene88676:CDS | 50.0% | |
| GAGCCCTTCAATGGAATCTC+TGG | - | chr8.1:4587315-4587334 | None:intergenic | 50.0% | |
| GAGTTGAGCTCTTGCAGACA+GGG | + | chr8.1:4586719-4586738 | MS.gene88676:CDS | 50.0% | |
| GCACCAAAACCTCAAGGTCT+TGG | + | chr8.1:4586694-4586713 | MS.gene88676:CDS | 50.0% | |
| GCTCTTGATATTGTCCTCCG+TGG | + | chr8.1:4586067-4586086 | MS.gene88676:CDS | 50.0% | |
| GGACGAGGTTGAAGTGGAAA+AGG | + | chr8.1:4586375-4586394 | MS.gene88676:CDS | 50.0% | |
| GGGAAAGACAGACTTCTACG+AGG | + | chr8.1:4587473-4587492 | MS.gene88676:CDS | 50.0% | |
| GGGTGGTGCACTTGAGAATT+TGG | + | chr8.1:4586774-4586793 | MS.gene88676:CDS | 50.0% | |
| GGTTTCAATGATGCTTGGGG+TGG | + | chr8.1:4586634-4586653 | MS.gene88676:CDS | 50.0% | |
| GTTCCCTTAGGTGCAACATC+TGG | - | chr8.1:4586745-4586764 | None:intergenic | 50.0% | |
| TCAACTCCACCAAGACCTTG+AGG | - | chr8.1:4586706-4586725 | None:intergenic | 50.0% | |
| TCAGGGAATCACTGCTTGCA+AGG | + | chr8.1:4586857-4586876 | MS.gene88676:CDS | 50.0% | |
| TCCAGTGGTCAAGTCATCGT+CGG | + | chr8.1:4585839-4585858 | MS.gene88676:CDS | 50.0% | |
| TGAGTCGATTGTGTTGCCTC+CGG | - | chr8.1:4586532-4586551 | None:intergenic | 50.0% | |
| TGTTACTACATTGCCGCCTC+CGG | + | chr8.1:4586510-4586529 | MS.gene88676:CDS | 50.0% | |
| TTCAATGATGCTTGGGGTGG+TGG | + | chr8.1:4586637-4586656 | MS.gene88676:CDS | 50.0% | |
| TTGCACCTAAGGGAACAGCT+GGG | + | chr8.1:4586749-4586768 | MS.gene88676:CDS | 50.0% | |
| ! | ACCAAGGCACCAAAACCTCA+AGG | + | chr8.1:4586688-4586707 | MS.gene88676:CDS | 50.0% |
| ! | CAAATGCATCGATGCTCGCT+TGG | - | chr8.1:4586237-4586256 | None:intergenic | 50.0% |
| ! | CCACCAAGACCTTGAGGTTT+TGG | - | chr8.1:4586700-4586719 | None:intergenic | 50.0% |
| !! | GAAAGCGGAAAGAGCACCAA+GGG | - | chr8.1:4585717-4585736 | None:intergenic | 50.0% |
| !! | TGCGGATAATTGGTCTTCGG+CGG | + | chr8.1:4586192-4586211 | MS.gene88676:CDS | 50.0% |
| !!! | ACCTTGAGGTTTTGGTGCCT+TGG | - | chr8.1:4586692-4586711 | None:intergenic | 50.0% |
| !!! | TGAGGTTTTGGTGCCTTGGT+TGG | - | chr8.1:4586688-4586707 | None:intergenic | 50.0% |
| ACCACTCGCGGGTTTGAAGA+AGG | - | chr8.1:4585679-4585698 | None:intergenic | 55.0% | |
| AGGGCCAGATGTTGCACCTA+AGG | + | chr8.1:4586738-4586757 | MS.gene88676:CDS | 55.0% | |
| CATTGAAGGGCTCTCCTGGA+AGG | + | chr8.1:4587322-4587341 | MS.gene88676:CDS | 55.0% | |
| CTTCCAGGAGAGCCCTTCAA+TGG | - | chr8.1:4587324-4587343 | None:intergenic | 55.0% | |
| GATCGGCGACGGTTATTCCA+AGG | - | chr8.1:4585916-4585935 | None:intergenic | 55.0% | |
| GCGATGCTTGCCACAATGCA+CGG | + | chr8.1:4586112-4586131 | MS.gene88676:CDS | 55.0% | |
| GCTAGCCACCACTTCATCAC+CGG | - | chr8.1:4586299-4586318 | None:intergenic | 55.0% | |
| GCTTGAAGCCGGTGATGAAG+TGG | + | chr8.1:4586288-4586307 | MS.gene88676:CDS | 55.0% | |
| GGAGTTATCGTGATCGGCGA+CGG | - | chr8.1:4585927-4585946 | None:intergenic | 55.0% | |
| GGAGTTGAGCTCTTGCAGAC+AGG | + | chr8.1:4586718-4586737 | MS.gene88676:CDS | 55.0% | |
| GGAGTTTGTGGGTCCAACCA+AGG | + | chr8.1:4586672-4586691 | MS.gene88676:CDS | 55.0% | |
| GGGCCAGATGTTGCACCTAA+GGG | + | chr8.1:4586739-4586758 | MS.gene88676:CDS | 55.0% | |
| GTTGCACCTAAGGGAACAGC+TGG | + | chr8.1:4586748-4586767 | MS.gene88676:CDS | 55.0% | |
| TATTTCCGGCCGAGCTTCTC+CGG | - | chr8.1:4586031-4586050 | None:intergenic | 55.0% | |
| TCCGACGATGACTTGACCAC+TGG | - | chr8.1:4585843-4585862 | None:intergenic | 55.0% | |
| TCCTTCTTCAAACCCGCGAG+TGG | + | chr8.1:4585675-4585694 | MS.gene88676:CDS | 55.0% | |
| TCTATACGGCCTGCTTCGGA+GGG | + | chr8.1:4587453-4587472 | MS.gene88676:CDS | 55.0% | |
| TCTGTCTTTCCCTCCGAAGC+AGG | - | chr8.1:4587465-4587484 | None:intergenic | 55.0% | |
| TGAAGCCGGTGATGAAGTGG+TGG | + | chr8.1:4586291-4586310 | MS.gene88676:CDS | 55.0% | |
| TGCACCTAAGGGAACAGCTG+GGG | + | chr8.1:4586750-4586769 | MS.gene88676:CDS | 55.0% | |
| TTCTATACGGCCTGCTTCGG+AGG | + | chr8.1:4587452-4587471 | MS.gene88676:CDS | 55.0% | |
| TTGACCACTGGAAGCTGCGA+GGG | - | chr8.1:4585831-4585850 | None:intergenic | 55.0% | |
| ! | ATCGTCACCGATGGATTCGG+CGG | - | chr8.1:4585807-4585826 | None:intergenic | 55.0% |
| ! | GGGATCGTCACCGATGGATT+CGG | - | chr8.1:4585810-4585829 | None:intergenic | 55.0% |
| !! | GATGCTCGCTTGGTGTTCGA+CGG | - | chr8.1:4586227-4586246 | None:intergenic | 55.0% |
| !! | GGAAAGCGGAAAGAGCACCA+AGG | - | chr8.1:4585718-4585737 | None:intergenic | 55.0% |
| !! | GGATAATTGGTCTTCGGCGG+AGG | + | chr8.1:4586195-4586214 | MS.gene88676:CDS | 55.0% |
| ACCTAAGGGAACAGCTGGGG+AGG | + | chr8.1:4586753-4586772 | MS.gene88676:CDS | 60.0% | |
| CCTAAGGGAACAGCTGGGGA+GGG | + | chr8.1:4586754-4586773 | MS.gene88676:CDS | 60.0% | |
| CCTCAGGAGACGCTTGAAGC+CGG | + | chr8.1:4586277-4586296 | MS.gene88676:CDS | 60.0% | |
| CTTGACCACTGGAAGCTGCG+AGG | - | chr8.1:4585832-4585851 | None:intergenic | 60.0% | |
| GATTGTGTTGCCTCCGGAGG+CGG | - | chr8.1:4586526-4586545 | None:intergenic | 60.0% | |
| GCCTACACCGCCGAATCCAT+CGG | + | chr8.1:4585797-4585816 | MS.gene88676:CDS | 60.0% | |
| GTCGATTGTGTTGCCTCCGG+AGG | - | chr8.1:4586529-4586548 | None:intergenic | 60.0% | |
| TACTACATTGCCGCCTCCGG+AGG | + | chr8.1:4586513-4586532 | MS.gene88676:CDS | 60.0% | |
| TCTTGGTTGCGGCGAATGCG+CGG | - | chr8.1:4585751-4585770 | None:intergenic | 60.0% | |
| TGACCACTGGAAGCTGCGAG+GGG | - | chr8.1:4585830-4585849 | None:intergenic | 60.0% | |
| TGTTAGGACAGCGGCGTCAG+AGG | + | chr8.1:4587041-4587060 | MS.gene88676:CDS | 60.0% | |
| TTCGGCGGTGTAGGCGTCTT+CGG | - | chr8.1:4585792-4585811 | None:intergenic | 60.0% | |
| ! | ACCGATGGATTCGGCGGTGT+AGG | - | chr8.1:4585801-4585820 | None:intergenic | 60.0% |
| !! | GGGTGGTGGACTCGATGCTT+CGG | + | chr8.1:4586651-4586670 | MS.gene88676:CDS | 60.0% |
| AAGGGAACAGCTGGGGAGGG+TGG | + | chr8.1:4586757-4586776 | MS.gene88676:CDS | 65.0% | |
| CACTGGTCACCGGAGCAGCA+AGG | - | chr8.1:4586321-4586340 | None:intergenic | 65.0% | |
| CCCTCCCCAGCTGTTCCCTT+AGG | - | chr8.1:4586757-4586776 | None:intergenic | 65.0% | |
| CCGGCTTCAAGCGTCTCCTG+AGG | - | chr8.1:4586280-4586299 | None:intergenic | 65.0% | |
| GACGTCAACGCCACGGCAAG+CGG | - | chr8.1:4586005-4586024 | None:intergenic | 65.0% | |
| GACGTCACGCCGGAGAAGCT+CGG | + | chr8.1:4586019-4586038 | MS.gene88676:CDS | 65.0% | |
| GATCCCCTCGCAGCTTCCAG+TGG | + | chr8.1:4585824-4585843 | MS.gene88676:CDS | 65.0% | |
| GTGAGGGTGGGAACCACTCG+CGG | - | chr8.1:4585691-4585710 | None:intergenic | 65.0% | |
| GTTGTCGTCACCGCTTGCCG+TGG | + | chr8.1:4585992-4586011 | MS.gene88676:CDS | 65.0% | |
| TCGGCGGTGTAGGCGTCTTC+GGG | - | chr8.1:4585791-4585810 | None:intergenic | 65.0% | |
| TGAGGGTGGGAACCACTCGC+GGG | - | chr8.1:4585690-4585709 | None:intergenic | 65.0% | |
| TGCGAGGGGATCGTCACCGA+TGG | - | chr8.1:4585816-4585835 | None:intergenic | 65.0% | |
| ! | AGAGCACCAAGGGCGCGTGA+GGG | - | chr8.1:4585707-4585726 | None:intergenic | 65.0% |
| !! | AAGAGCACCAAGGGCGCGTG+AGG | - | chr8.1:4585708-4585727 | None:intergenic | 65.0% |
| !! | GGTGGCTAGCCTTGCTGCTC+CGG | + | chr8.1:4586309-4586328 | MS.gene88676:CDS | 65.0% |
| CCGGCGTGACGTCAACGCCA+CGG | - | chr8.1:4586012-4586031 | None:intergenic | 70.0% | |
| CGGCGGTGTAGGCGTCTTCG+GGG | - | chr8.1:4585790-4585809 | None:intergenic | 70.0% | |
| TCACGCCGGAGAAGCTCGGC+CGG | + | chr8.1:4586023-4586042 | MS.gene88676:CDS | 70.0% | |
| TTCCCACCCTCACGCGCCCT+TGG | + | chr8.1:4585698-4585717 | MS.gene88676:CDS | 70.0% | |
| ! | CACCAAGGGCGCGTGAGGGT+GGG | - | chr8.1:4585703-4585722 | None:intergenic | 70.0% |
| !! | CCGTGGCGTTGACGTCACGC+CGG | + | chr8.1:4586009-4586028 | MS.gene88676:CDS | 70.0% |
| CGAATGCGCGGCGCGTGTGG+CGG | - | chr8.1:4585739-4585758 | None:intergenic | 75.0% | |
| ! | GCACCAAGGGCGCGTGAGGG+TGG | - | chr8.1:4585704-4585723 | None:intergenic | 75.0% |
| ! | GCGGCGCGTGTGGCGGAAAG+CGG | - | chr8.1:4585732-4585751 | None:intergenic | 75.0% |
| ! | CGGCGAATGCGCGGCGCGTG+TGG | - | chr8.1:4585742-4585761 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 4585629 | 4587536 | 4585629 | ID=MS.gene88676 |
| chr8.1 | mRNA | 4585629 | 4587536 | 4585629 | ID=MS.gene88676.t1;Parent=MS.gene88676 |
| chr8.1 | exon | 4585629 | 4587536 | 4585629 | ID=MS.gene88676.t1.exon1;Parent=MS.gene88676.t1 |
| chr8.1 | CDS | 4585629 | 4587536 | 4585629 | ID=cds.MS.gene88676.t1;Parent=MS.gene88676.t1 |
| Gene Sequence |
| Protein sequence |
