Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88731.t1 | RHN56435.1 | 96.9 | 517 | 16 | 0 | 1 | 517 | 79 | 595 | 5.80E-282 | 979.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88731.t1 | Q66GI9 | 69.9 | 509 | 137 | 6 | 11 | 515 | 34 | 530 | 1.3e-194 | 680.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88731.t1 | G7KE37 | 96.9 | 517 | 16 | 0 | 1 | 517 | 1 | 517 | 4.2e-282 | 979.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene88731 | MS.gene45934 | PPI |
| MS.gene021154 | MS.gene88731 | PPI |
| MS.gene88731 | MS.gene93642 | PPI |
| MS.gene67345 | MS.gene88731 | PPI |
| MS.gene88731 | MS.gene30561 | PPI |
| MS.gene054996 | MS.gene88731 | PPI |
| MS.gene88731 | MS.gene004003 | PPI |
| MS.gene88731 | MS.gene41133 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88731.t1 | MTR_5g069630 | 98.066 | 517 | 10 | 0 | 1 | 517 | 1 | 517 | 0.0 | 1026 |
| MS.gene88731.t1 | MTR_7g066780 | 55.635 | 417 | 181 | 1 | 96 | 512 | 93 | 505 | 3.25e-165 | 478 |
| MS.gene88731.t1 | MTR_8g030600 | 39.627 | 429 | 250 | 3 | 84 | 512 | 167 | 586 | 8.95e-107 | 331 |
| MS.gene88731.t1 | MTR_3g463080 | 40.528 | 417 | 241 | 2 | 96 | 512 | 105 | 514 | 3.50e-104 | 322 |
| MS.gene88731.t1 | MTR_7g077830 | 39.089 | 417 | 247 | 2 | 96 | 512 | 123 | 532 | 7.84e-104 | 322 |
| MS.gene88731.t1 | MTR_8g030600 | 40.882 | 340 | 193 | 2 | 84 | 423 | 167 | 498 | 2.20e-84 | 270 |
| MS.gene88731.t1 | MTR_4g116030 | 32.850 | 414 | 256 | 5 | 97 | 499 | 110 | 512 | 6.09e-66 | 223 |
| MS.gene88731.t1 | MTR_4g030900 | 29.318 | 440 | 287 | 7 | 97 | 515 | 7 | 443 | 1.38e-53 | 187 |
| MS.gene88731.t1 | MTR_2g027710 | 39.877 | 163 | 98 | 0 | 314 | 476 | 72 | 234 | 2.45e-40 | 147 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88731.t1 | AT3G46980 | 69.941 | 509 | 137 | 6 | 11 | 515 | 82 | 578 | 0.0 | 691 |
| MS.gene88731.t1 | AT3G46980 | 69.941 | 509 | 137 | 6 | 11 | 515 | 34 | 530 | 0.0 | 690 |
| MS.gene88731.t1 | AT3G46980 | 69.941 | 509 | 137 | 6 | 11 | 515 | 34 | 530 | 0.0 | 690 |
| MS.gene88731.t1 | AT3G46980 | 75.783 | 351 | 82 | 2 | 167 | 515 | 1 | 350 | 0.0 | 554 |
| MS.gene88731.t1 | AT3G46980 | 75.783 | 351 | 82 | 2 | 167 | 515 | 1 | 350 | 0.0 | 554 |
| MS.gene88731.t1 | AT3G46980 | 75.783 | 351 | 82 | 2 | 167 | 515 | 1 | 350 | 0.0 | 553 |
| MS.gene88731.t1 | AT3G46980 | 75.783 | 351 | 82 | 2 | 167 | 515 | 1 | 350 | 0.0 | 553 |
| MS.gene88731.t1 | AT2G38060 | 56.563 | 419 | 176 | 2 | 96 | 512 | 97 | 511 | 1.95e-165 | 479 |
| MS.gene88731.t1 | AT3G46980 | 74.564 | 287 | 70 | 2 | 231 | 515 | 1 | 286 | 9.40e-157 | 448 |
| MS.gene88731.t1 | AT2G38060 | 56.986 | 365 | 151 | 2 | 96 | 458 | 97 | 457 | 5.63e-141 | 418 |
| MS.gene88731.t1 | AT4G00370 | 35.953 | 509 | 302 | 6 | 18 | 512 | 41 | 539 | 4.91e-107 | 330 |
| MS.gene88731.t1 | AT2G29650 | 36.770 | 514 | 286 | 7 | 22 | 512 | 13 | 510 | 1.01e-104 | 323 |
| MS.gene88731.t1 | AT2G29650 | 40.250 | 400 | 232 | 2 | 113 | 512 | 6 | 398 | 3.46e-99 | 305 |
| MS.gene88731.t1 | AT2G29650 | 40.506 | 395 | 228 | 2 | 118 | 512 | 1 | 388 | 8.28e-99 | 304 |
| MS.gene88731.t1 | AT2G29650 | 36.160 | 401 | 218 | 6 | 22 | 399 | 13 | 398 | 1.55e-74 | 241 |
| MS.gene88731.t1 | AT5G20380 | 32.282 | 412 | 257 | 5 | 96 | 498 | 97 | 495 | 5.15e-65 | 220 |
| MS.gene88731.t1 | AT5G20380 | 32.282 | 412 | 257 | 5 | 96 | 498 | 149 | 547 | 1.84e-64 | 219 |
| MS.gene88731.t1 | AT5G44370 | 30.254 | 433 | 281 | 8 | 96 | 515 | 8 | 432 | 1.18e-56 | 195 |
Find 143 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATTTCTCGTGAACTTTC+AGG | 0.171662 | 5.4:-54430002 | MS.gene88731:intron |
| GGAACACTTGCTGCTATAAT+TGG | 0.202615 | 5.4:-54429345 | MS.gene88731:CDS |
| CCTTACTGAGTTGAAGTAAA+TGG | 0.216251 | 5.4:+54431014 | None:intergenic |
| CGCTTTCTCTGGAATTGTTC+AGG | 0.218765 | 5.4:-54433935 | MS.gene88731:intron |
| CGCTGCAGAGACTTCCCTTT+TGG | 0.224383 | 5.4:-54432479 | MS.gene88731:CDS |
| CAGAGCCGCCATTGGGAAAT+TGG | 0.227623 | 5.4:+54434199 | None:intergenic |
| TTGGTTTGTCTGGGTTTCTT+TGG | 0.242510 | 5.4:-54431560 | MS.gene88731:CDS |
| TGAACTACCTTGCTGGCTTT+TGG | 0.308899 | 5.4:-54430831 | MS.gene88731:CDS |
| GGTCCTGGAGTTAGCCTCAT+TGG | 0.317463 | 5.4:-54430103 | MS.gene88731:CDS |
| GTTCCTTTATCTGTTGCTAA+TGG | 0.318241 | 5.4:-54433967 | MS.gene88731:CDS |
| CTGCAAACGCCATGCATAGC+TGG | 0.327776 | 5.4:-54431356 | MS.gene88731:CDS |
| GGTTTCTTTGGGTGTTGGTC+TGG | 0.335196 | 5.4:-54431548 | MS.gene88731:CDS |
| ATGTCGCAAGGCGGTATATT+TGG | 0.340618 | 5.4:-54431597 | MS.gene88731:CDS |
| TGAACGGGTGAAGTTGAGTT+TGG | 0.342221 | 5.4:+54434239 | None:intergenic |
| GCCTTTGGCTTGAAATCCTT+TGG | 0.344433 | 5.4:-54430031 | MS.gene88731:CDS |
| GTTGAAGCTGTTGTTGTTGT+TGG | 0.359312 | 5.4:+54434097 | None:intergenic |
| GTCTGGGTTTCTTTGGGTGT+TGG | 0.364306 | 5.4:-54431553 | MS.gene88731:CDS |
| TGGTTTGTCTGGGTTTCTTT+GGG | 0.370638 | 5.4:-54431559 | MS.gene88731:CDS |
| GCCCTTGCCCGTTCAGTTTG+AGG | 0.373252 | 5.4:+54431687 | None:intergenic |
| CAACCATTAGCAACAGATAA+AGG | 0.373341 | 5.4:+54433964 | None:intergenic |
| GCTTGGCTAACATTAGCCTT+TGG | 0.378702 | 5.4:-54430046 | MS.gene88731:CDS |
| CTTGGTTTAGTGCCGTTCCA+TGG | 0.378789 | 5.4:-54430870 | MS.gene88731:CDS |
| GGTTGGACTCGCGCTTTCTC+TGG | 0.382881 | 5.4:-54433946 | MS.gene88731:CDS |
| TAGAGTATAGGCAGTAGAAA+AGG | 0.395049 | 5.4:+54429235 | None:intergenic |
| CTTTATCTGTTGCTAATGGT+TGG | 0.400386 | 5.4:-54433963 | MS.gene88731:CDS |
| GAGATCGCACCACAGTATTC+TGG | 0.404867 | 5.4:-54429889 | MS.gene88731:CDS |
| CTTGTCGTCCGTGCTTTGCT+TGG | 0.406235 | 5.4:-54432451 | MS.gene88731:CDS |
| GGGTATTTGATTTCACCTAT+AGG | 0.418857 | 5.4:-54432592 | MS.gene88731:CDS |
| TGGAAAAGTGGTAATGGCTT+GGG | 0.420023 | 5.4:-54432542 | MS.gene88731:CDS |
| GCTATCATGAACTACCTTGC+TGG | 0.423028 | 5.4:-54430838 | MS.gene88731:CDS |
| GCTGTTGTTGTTGTTGGTGG+TGG | 0.431056 | 5.4:+54434103 | None:intergenic |
| GCTCATTCACTGCAGTCCAT+TGG | 0.433703 | 5.4:-54430133 | MS.gene88731:intron |
| TTAAATTTCTTTGCCTCCAC+CGG | 0.437928 | 5.4:+54431435 | None:intergenic |
| GCTGTTGGAATTTCGATGGC+TGG | 0.440401 | 5.4:-54431666 | MS.gene88731:CDS |
| AGTGGTGGCGATGCTCGCTT+TGG | 0.452450 | 5.4:-54434037 | MS.gene88731:CDS |
| AAAGGGCAGCAAGAAAATAT+AGG | 0.454954 | 5.4:+54429253 | None:intergenic |
| CTTACTGAGTTGAAGTAAAT+GGG | 0.455623 | 5.4:+54431015 | None:intergenic |
| GGACGACAAGTAAAGCCAAA+AGG | 0.459043 | 5.4:+54432464 | None:intergenic |
| TTGAAATCCTTTGGTCACTC+TGG | 0.459693 | 5.4:-54430022 | MS.gene88731:CDS |
| CACGGAGGCGGAGAAGGGAG+CGG | 0.461840 | 5.4:+54434169 | None:intergenic |
| CTCTCTCTCCTGTAGAGTAT+AGG | 0.462250 | 5.4:+54429223 | None:intergenic |
| ACTGAACGGGCAAGGGCTGT+TGG | 0.465381 | 5.4:-54431681 | MS.gene88731:CDS |
| GAACGGGTGAAGTTGAGTTT+GGG | 0.467788 | 5.4:+54434240 | None:intergenic |
| ACCAACATTCCTCCACCTAT+AGG | 0.473248 | 5.4:+54432577 | None:intergenic |
| GAGTTTGGGTGAGTGGAAGT+TGG | 0.473452 | 5.4:+54434254 | None:intergenic |
| ACCGCCTTGCGACATGAGAA+TGG | 0.474302 | 5.4:+54431605 | None:intergenic |
| ACCCCTCAGTTGCTTCTGCT+TGG | 0.475369 | 5.4:-54430063 | MS.gene88731:CDS |
| TTGGTTTAGTGCCGTTCCAT+GGG | 0.479267 | 5.4:-54430869 | MS.gene88731:CDS |
| TTCTACTGCCTATACTCTAC+AGG | 0.479860 | 5.4:-54429231 | MS.gene88731:CDS |
| CTATGGTGGAAAAGTGGTAA+TGG | 0.480923 | 5.4:-54432548 | MS.gene88731:CDS |
| AGGTATATCATGTCGATCTC+AGG | 0.481227 | 5.4:-54430900 | MS.gene88731:CDS |
| TTTCAGCTTGGATGTGCGAT+AGG | 0.482350 | 5.4:-54431642 | MS.gene88731:CDS |
| TTTATTCGGAAATGGTGAAC+GGG | 0.482549 | 5.4:+54434224 | None:intergenic |
| GCGGAGAAGGGAGCGGAGAG+AGG | 0.488710 | 5.4:+54434176 | None:intergenic |
| ATGGTTTCCTCAAACTGAAC+GGG | 0.489867 | 5.4:-54431694 | MS.gene88731:CDS |
| TTCCTCAAACTGAACGGGCA+AGG | 0.491223 | 5.4:-54431689 | MS.gene88731:CDS |
| GATATCTGAGGACTTCGGTC+AGG | 0.491544 | 5.4:+54431504 | None:intergenic |
| ATAATTGGAACAGTTGGAGC+TGG | 0.492095 | 5.4:-54429330 | MS.gene88731:CDS |
| TGAGTTGAACTGAGCGTCGT+TGG | 0.497033 | 5.4:+54434140 | None:intergenic |
| GAGAGAGGCAGAGCCGCCAT+TGG | 0.497695 | 5.4:+54434191 | None:intergenic |
| GAAGCTGTTGTTGTTGTTGG+TGG | 0.499475 | 5.4:+54434100 | None:intergenic |
| ACCTATAGGTGGAGGAATGT+TGG | 0.502436 | 5.4:-54432578 | MS.gene88731:CDS |
| TGCAAACGCCATGCATAGCT+GGG | 0.502609 | 5.4:-54431355 | MS.gene88731:intron |
| AGAGAGGCAGAGCCGCCATT+GGG | 0.504144 | 5.4:+54434192 | None:intergenic |
| GCTGCTATAATTGGAACAGT+TGG | 0.504312 | 5.4:-54429336 | MS.gene88731:CDS |
| AAGAAACACGGAGGCGGAGA+AGG | 0.506280 | 5.4:+54434163 | None:intergenic |
| GGGTAATGTTGGTGGTTTAG+CGG | 0.507274 | 5.4:+54434299 | None:intergenic |
| CAGTATTCTGGTGTTATACA+TGG | 0.508481 | 5.4:-54429877 | MS.gene88731:intron |
| TGAAGTTGAGTTTGGGTGAG+TGG | 0.511084 | 5.4:+54434247 | None:intergenic |
| GTGGAAAAGTGGTAATGGCT+TGG | 0.513430 | 5.4:-54432543 | MS.gene88731:CDS |
| GGAATGTTGGTGGATAACTA+TGG | 0.515203 | 5.4:-54432565 | MS.gene88731:CDS |
| TCCTCAAACTGAACGGGCAA+GGG | 0.516195 | 5.4:-54431688 | MS.gene88731:CDS |
| TCAGATATCAAAATATGAGC+TGG | 0.520475 | 5.4:-54431490 | MS.gene88731:CDS |
| TTGATTTCACCTATAGGTGG+AGG | 0.522773 | 5.4:-54432586 | MS.gene88731:CDS |
| GACGACAAGTAAAGCCAAAA+GGG | 0.525642 | 5.4:+54432465 | None:intergenic |
| CCGCCTTGCGACATGAGAAT+GGG | 0.526447 | 5.4:+54431606 | None:intergenic |
| TCGATCTCAGGCAGGCAGCT+TGG | 0.528764 | 5.4:-54430888 | MS.gene88731:CDS |
| GGTTGCTCCGCCGAAAATGA+TGG | 0.530785 | 5.4:+54434323 | None:intergenic |
| TGCCGTTCCATGGGTTGTGA+TGG | 0.531447 | 5.4:-54430860 | MS.gene88731:CDS |
| GTAGGAATGGCAAATACTGC+TGG | 0.539160 | 5.4:-54429366 | MS.gene88731:intron |
| TTCAGCTTGGATGTGCGATA+GGG | 0.540655 | 5.4:-54431641 | MS.gene88731:CDS |
| GGAAAAGTGGTAATGGCTTG+GGG | 0.543686 | 5.4:-54432541 | MS.gene88731:CDS |
| GCATGAATAACATGGTGGCC+AGG | 0.543904 | 5.4:-54432402 | MS.gene88731:intron |
| AGAGTATAGGCAGTAGAAAA+GGG | 0.544393 | 5.4:+54429236 | None:intergenic |
| AGAAACACGGAGGCGGAGAA+GGG | 0.545254 | 5.4:+54434164 | None:intergenic |
| TCGATGGCTGGATTTCAGCT+TGG | 0.549464 | 5.4:-54431654 | MS.gene88731:CDS |
| GAGCTAGTTGGTTCATTCCG+AGG | 0.550210 | 5.4:-54429297 | MS.gene88731:CDS |
| AAGGGAAGTCTCTGCAGCGA+AGG | 0.552824 | 5.4:+54432483 | None:intergenic |
| ATTGACTCGTAAGATTATGC+AGG | 0.555441 | 5.4:-54430773 | MS.gene88731:intron |
| AAGGGCTGTTGGAATTTCGA+TGG | 0.561576 | 5.4:-54431670 | MS.gene88731:CDS |
| GCTTTGCTTGGTCTAGCTGA+AGG | 0.563691 | 5.4:-54432439 | MS.gene88731:CDS |
| TCTCCCATTCTCATGTCGCA+AGG | 0.564637 | 5.4:-54431609 | MS.gene88731:CDS |
| GAAAGTAAGCGTCTGAAAGG+AGG | 0.565154 | 5.4:+54431405 | None:intergenic |
| TTTGAAAGTAAGCGTCTGAA+AGG | 0.567422 | 5.4:+54431402 | None:intergenic |
| TACTTTCAAAGATGCCAACA+TGG | 0.572670 | 5.4:-54431389 | MS.gene88731:CDS |
| ACCAAAGGATTTCAAGCCAA+AGG | 0.574114 | 5.4:+54430030 | None:intergenic |
| AAAGTAAGCGTCTGAAAGGA+GGG | 0.577273 | 5.4:+54431406 | None:intergenic |
| TATTTGATTTCACCTATAGG+TGG | 0.583694 | 5.4:-54432589 | MS.gene88731:CDS |
| ATGATAGCCATCACAACCCA+TGG | 0.591261 | 5.4:+54430853 | None:intergenic |
| TGAGTGGAAGTTGGAGAGTA+CGG | 0.592301 | 5.4:+54434263 | None:intergenic |
| TCCAGGACCAACAAAACCAA+TGG | 0.593248 | 5.4:+54430117 | None:intergenic |
| CGTTGGAAGAAACACGGAGG+CGG | 0.593444 | 5.4:+54434157 | None:intergenic |
| GCCACCATGTTATTCATGCA+AGG | 0.595628 | 5.4:+54432406 | None:intergenic |
| AAGCATTACCCAGCTATGCA+TGG | 0.596028 | 5.4:+54431347 | None:intergenic |
| AGTTGGAGAGTACGGTGCGG+TGG | 0.596859 | 5.4:+54434271 | None:intergenic |
| TTGCAGTTGCTAAACCAATG+AGG | 0.597816 | 5.4:+54430089 | None:intergenic |
| TATAGGTGGAGGAATGTTGG+TGG | 0.598602 | 5.4:-54432575 | MS.gene88731:CDS |
| GGATAACTATGGTGGAAAAG+TGG | 0.598964 | 5.4:-54432554 | MS.gene88731:CDS |
| AGCAACAGATAAAGGAACAA+TGG | 0.600831 | 5.4:+54433972 | None:intergenic |
| TCCGCCGAAAATGATGGCGG+AGG | 0.602078 | 5.4:+54434329 | None:intergenic |
| GATGGTTTCCTCAAACTGAA+CGG | 0.605328 | 5.4:-54431695 | MS.gene88731:CDS |
| TGGCTTGGGGTGTAGCATTG+TGG | 0.606522 | 5.4:-54432528 | MS.gene88731:CDS |
| AGCCATCACAACCCATGGAA+CGG | 0.607117 | 5.4:+54430858 | None:intergenic |
| AGGGAAGTCTCTGCAGCGAA+GGG | 0.615313 | 5.4:+54432484 | None:intergenic |
| AATAAAATCCAATTTCCCAA+TGG | 0.616338 | 5.4:-54434207 | MS.gene88731:CDS |
| TACACGATCAGCGTTACAGA+GGG | 0.616532 | 5.4:+54434008 | None:intergenic |
| GTACATTATTTATACTCACC+AGG | 0.617364 | 5.4:+54429186 | None:intergenic |
| AGCCAAGCAGAAGCAACTGA+GGG | 0.619076 | 5.4:+54430061 | None:intergenic |
| CACTTCTGAACGAGTCAAAG+TGG | 0.620499 | 5.4:-54434055 | MS.gene88731:CDS |
| AAACCAATGAGGCTAACTCC+AGG | 0.622844 | 5.4:+54430100 | None:intergenic |
| AAAATCCAATTTCCCAATGG+CGG | 0.625987 | 5.4:-54434204 | MS.gene88731:CDS |
| ATATCATGTCGATCTCAGGC+AGG | 0.628168 | 5.4:-54430896 | MS.gene88731:CDS |
| GCTTGGTCTAGCTGAAGGTG+TGG | 0.629975 | 5.4:-54432434 | MS.gene88731:CDS |
| GTGATGAACTCAGTGAAACT+CGG | 0.632885 | 5.4:+54434075 | None:intergenic |
| TATCTGACCAAAAGCCAGCA+AGG | 0.634373 | 5.4:+54430824 | None:intergenic |
| GCAGCGATTAGAGACCATGT+TGG | 0.635792 | 5.4:+54431375 | None:intergenic |
| TAATGTTGGTGGTTTAGCGG+CGG | 0.642538 | 5.4:+54434302 | None:intergenic |
| CAGCTAGACCAAGCAAAGCA+CGG | 0.644053 | 5.4:+54432443 | None:intergenic |
| ATGTTGGTGGATAACTATGG+TGG | 0.648049 | 5.4:-54432562 | MS.gene88731:CDS |
| TCTTCCTTGCATGAATAACA+TGG | 0.649489 | 5.4:-54432410 | MS.gene88731:CDS |
| TAGCCAAGCAGAAGCAACTG+AGG | 0.650053 | 5.4:+54430060 | None:intergenic |
| CTACACGATCAGCGTTACAG+AGG | 0.657415 | 5.4:+54434007 | None:intergenic |
| CCCATTCTCATGTCGCAAGG+CGG | 0.664754 | 5.4:-54431606 | MS.gene88731:CDS |
| TTCTGAACGAGTCAAAGTGG+TGG | 0.680019 | 5.4:-54434052 | MS.gene88731:CDS |
| TGCTCCGCCGAAAATGATGG+CGG | 0.686657 | 5.4:+54434326 | None:intergenic |
| TCAGATATGATGATACAAAG+TGG | 0.691862 | 5.4:-54430808 | MS.gene88731:CDS |
| GAGAAATCCAGAGTGACCAA+AGG | 0.692248 | 5.4:+54430015 | None:intergenic |
| GCCAAGCAGAAGCAACTGAG+GGG | 0.703992 | 5.4:+54430062 | None:intergenic |
| GAGCGTCGTTGGAAGAAACA+CGG | 0.710920 | 5.4:+54434151 | None:intergenic |
| TCCTTGCATGAATAACATGG+TGG | 0.712615 | 5.4:-54432407 | MS.gene88731:CDS |
| TGTATAACACCAGAATACTG+TGG | 0.748590 | 5.4:+54429880 | None:intergenic |
| GGAAGTTGGAGAGTACGGTG+CGG | 0.765776 | 5.4:+54434268 | None:intergenic |
| CGTCGTTGGAAGAAACACGG+AGG | 0.798020 | 5.4:+54434154 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTATTTTTAATAA+GGG | - | chr5.4:54430707-54430726 | MS.gene88731:intron | 0.0% |
| !! | ATGAAAAATGAAGTTAAAAA+TGG | + | chr5.4:54432452-54432471 | None:intergenic | 15.0% |
| !!! | TAATTTTCTTAAGTTATGTT+CGG | - | chr5.4:54429863-54429882 | MS.gene88731:intron | 15.0% |
| !! | ATCATAAGAAATCTTAATCT+AGG | + | chr5.4:54434115-54434134 | None:intergenic | 20.0% |
| !! | GAGTTGACTATTAAATTAAA+TGG | - | chr5.4:54434021-54434040 | MS.gene88731:CDS | 20.0% |
| !! | GCTTCTTCAAAAAAAAAAAA+TGG | - | chr5.4:54431777-54431796 | MS.gene88731:intron | 20.0% |
| !! | GTACCAATTAAACAAATTAA+AGG | - | chr5.4:54430671-54430690 | MS.gene88731:intron | 20.0% |
| !! | TATAAATGAAATCCCATTAT+AGG | - | chr5.4:54432604-54432623 | MS.gene88731:CDS | 20.0% |
| !! | TGAATTTGCATGAATAATAA+TGG | + | chr5.4:54432420-54432439 | None:intergenic | 20.0% |
| !! | TTGGCAAATTTAATTCAAAT+AGG | + | chr5.4:54433924-54433943 | None:intergenic | 20.0% |
| !!! | AAATGGAATTTTTTACTTCT+TGG | - | chr5.4:54434038-54434057 | MS.gene88731:CDS | 20.0% |
| !!! | AACCCTAATTTTGATTTATA+CGG | + | chr5.4:54430296-54430315 | None:intergenic | 20.0% |
| !!! | AAGTTTTAAGTCTTTAGTTT+TGG | - | chr5.4:54433217-54433236 | MS.gene88731:intron | 20.0% |
| !!! | ATATGACTAATATTTGAGTT+TGG | - | chr5.4:54431755-54431774 | MS.gene88731:intron | 20.0% |
| !!! | ATATTTTTCTATTCGAGAAA+TGG | + | chr5.4:54432348-54432367 | None:intergenic | 20.0% |
| !!! | ATTATTGATTAGGGATATTA+AGG | - | chr5.4:54431343-54431362 | MS.gene88731:intron | 20.0% |
| !!! | TACAGATTTAAAGTTTGAAA+TGG | - | chr5.4:54431586-54431605 | MS.gene88731:CDS | 20.0% |
| !!! | TATTTTTCTATTCGAGAAAT+GGG | + | chr5.4:54432347-54432366 | None:intergenic | 20.0% |
| !!! | TCATTTGGTATTATTGATTA+GGG | - | chr5.4:54431334-54431353 | MS.gene88731:intron | 20.0% |
| !!! | TCATTTTTCATTATTTCACA+GGG | - | chr5.4:54432461-54432480 | MS.gene88731:CDS | 20.0% |
| !!! | TGCACCTTTTTTTTAAATAA+GGG | + | chr5.4:54430147-54430166 | None:intergenic | 20.0% |
| !!! | TGTTCCCTTATTTAAAAAAA+AGG | - | chr5.4:54430140-54430159 | MS.gene88731:intron | 20.0% |
| !!! | TTATATTCATTTTTCATCAC+AGG | - | chr5.4:54433613-54433632 | MS.gene88731:intron | 20.0% |
| !!! | TTCATTTGGTATTATTGATT+AGG | - | chr5.4:54431333-54431352 | MS.gene88731:intron | 20.0% |
| !!! | TTCATTTTTCATTATTTCAC+AGG | - | chr5.4:54432460-54432479 | MS.gene88731:CDS | 20.0% |
| !!! | TTTCAATATGGTTTTTGTTT+TGG | - | chr5.4:54431619-54431638 | MS.gene88731:CDS | 20.0% |
| ! | AAATGGACATGACTAATATT+TGG | - | chr5.4:54431794-54431813 | MS.gene88731:intron | 25.0% |
| ! | AATAAAATCCAATTTCCCAA+TGG | - | chr5.4:54429317-54429336 | MS.gene88731:CDS | 25.0% |
| ! | AATACAATAACAGTAACCAA+AGG | + | chr5.4:54431697-54431716 | None:intergenic | 25.0% |
| ! | ATAAAGATAAAGGACCAAAA+AGG | + | chr5.4:54430106-54430125 | None:intergenic | 25.0% |
| ! | ATACAATAACAGTAACCAAA+GGG | + | chr5.4:54431696-54431715 | None:intergenic | 25.0% |
| ! | CAAAAAACACTATAATTGCA+AGG | - | chr5.4:54430807-54430826 | MS.gene88731:CDS | 25.0% |
| ! | GAACACCAAAATAAAGATAA+AGG | + | chr5.4:54430116-54430135 | None:intergenic | 25.0% |
| ! | GAAGAATTTGGAAGAAAAAT+GGG | + | chr5.4:54430468-54430487 | None:intergenic | 25.0% |
| ! | GTACCAATGAAACAAATTAA+AGG | + | chr5.4:54430177-54430196 | None:intergenic | 25.0% |
| ! | TCCCGTATAAATCAAAATTA+GGG | - | chr5.4:54430291-54430310 | MS.gene88731:intron | 25.0% |
| ! | TGAAGAATTTGGAAGAAAAA+TGG | + | chr5.4:54430469-54430488 | None:intergenic | 25.0% |
| ! | TTCCCGTATAAATCAAAATT+AGG | - | chr5.4:54430290-54430309 | MS.gene88731:intron | 25.0% |
| ! | TTTGTTGCAATCTCTAAATT+GGG | + | chr5.4:54430493-54430512 | None:intergenic | 25.0% |
| !! | AAAATGCTTAAACACCTTTT+TGG | - | chr5.4:54430089-54430108 | MS.gene88731:CDS | 25.0% |
| !! | AATTGGATTTTATTCGGAAA+TGG | + | chr5.4:54429311-54429330 | None:intergenic | 25.0% |
| !! | ATAAAAAAAAAGGTGCAGAT+AGG | + | chr5.4:54430698-54430717 | None:intergenic | 25.0% |
| !! | ATAAAGATAAGGTACCATAA+AGG | - | chr5.4:54430748-54430767 | MS.gene88731:intron | 25.0% |
| !! | ATGGTACCTTATCTTTATTT+CGG | + | chr5.4:54430746-54430765 | None:intergenic | 25.0% |
| !! | ATTTGTTGCAATCTCTAAAT+TGG | + | chr5.4:54430494-54430513 | None:intergenic | 25.0% |
| !! | CATTTTTCATTATTTCACAG+GGG | - | chr5.4:54432462-54432481 | MS.gene88731:CDS | 25.0% |
| !! | TAAAAGACAAACATCTTTTC+CGG | - | chr5.4:54432070-54432089 | MS.gene88731:intron | 25.0% |
| !! | TATATGTTTGGTCTAGAATT+TGG | - | chr5.4:54433840-54433859 | MS.gene88731:intron | 25.0% |
| !! | TCATGGAATTTTATGAAACT+GGG | - | chr5.4:54433981-54434000 | MS.gene88731:CDS | 25.0% |
| !! | TTATTGTTATTGTTGCATGA+TGG | - | chr5.4:54430867-54430886 | MS.gene88731:CDS | 25.0% |
| !! | TTCATGGAATTTTATGAAAC+TGG | - | chr5.4:54433980-54433999 | MS.gene88731:CDS | 25.0% |
| !! | TTGGGAAATTGGATTTTATT+CGG | + | chr5.4:54429317-54429336 | None:intergenic | 25.0% |
| !! | TTTAAAAAAAAGGTGCACAT+AGG | - | chr5.4:54430150-54430169 | MS.gene88731:intron | 25.0% |
| !! | TTTTGCAGAACATTTTTCAT+CGG | - | chr5.4:54433742-54433761 | MS.gene88731:intron | 25.0% |
| !!! | AATTTTTTACTTCTTGGTAG+TGG | - | chr5.4:54434044-54434063 | MS.gene88731:CDS | 25.0% |
| !!! | ACCCTAATTTTGATTTATAC+GGG | + | chr5.4:54430295-54430314 | None:intergenic | 25.0% |
| !!! | ATTCAAGAATGTTGCTTTTA+TGG | - | chr5.4:54429765-54429784 | MS.gene88731:intron | 25.0% |
| !!! | ATTTTGATTTATACGGGAAT+TGG | + | chr5.4:54430289-54430308 | None:intergenic | 25.0% |
| !!! | ATTTTTTACTTCTTGGTAGT+GGG | - | chr5.4:54434045-54434064 | MS.gene88731:CDS | 25.0% |
| !!! | CTTGCAATTATAGTGTTTTT+TGG | + | chr5.4:54430809-54430828 | None:intergenic | 25.0% |
| !!! | GGTCCTTTAATTTGTTTAAT+TGG | + | chr5.4:54430677-54430696 | None:intergenic | 25.0% |
| !!! | GTGCACCTTTTTTTTAAATA+AGG | + | chr5.4:54430148-54430167 | None:intergenic | 25.0% |
| !!! | TTGGTCCTTTATCTTTATTT+TGG | - | chr5.4:54430108-54430127 | MS.gene88731:CDS | 25.0% |
| !!! | TTTTTGAAATCGTTGAACAA+TGG | - | chr5.4:54430569-54430588 | MS.gene88731:intron | 25.0% |
| !!! | TTTTTTTCAACAAGACTGTT+TGG | + | chr5.4:54429961-54429980 | None:intergenic | 25.0% |
| AAAATTGAGAGCTTCTACAT+TGG | - | chr5.4:54433889-54433908 | MS.gene88731:intron | 30.0% | |
| AAAGCCAATAACAATAACAC+AGG | + | chr5.4:54429656-54429675 | None:intergenic | 30.0% | |
| AAATCTGGTAGCTATATGTT+TGG | - | chr5.4:54433828-54433847 | MS.gene88731:intron | 30.0% | |
| AAGCCAACAAAAAACTTACA+AGG | - | chr5.4:54430776-54430795 | MS.gene88731:CDS | 30.0% | |
| ACAAACCAAAAATCACAAAC+GGG | + | chr5.4:54431953-54431972 | None:intergenic | 30.0% | |
| ACAACCAAAATTTGAATACC+TGG | + | chr5.4:54431143-54431162 | None:intergenic | 30.0% | |
| ACACAGAGATAACATAATAC+AGG | + | chr5.4:54433791-54433810 | None:intergenic | 30.0% | |
| ACACATTGGAAAAAAATGAG+AGG | - | chr5.4:54432782-54432801 | MS.gene88731:intron | 30.0% | |
| AGGAGGTTTACAAGATAAAA+TGG | + | chr5.4:54433681-54433700 | None:intergenic | 30.0% | |
| ATAACACAGTGTATTCATCA+AGG | + | chr5.4:54430851-54430870 | None:intergenic | 30.0% | |
| ATAAGATAAGTGAATCCAGT+TGG | + | chr5.4:54432297-54432316 | None:intergenic | 30.0% | |
| ATGTAAGCAACAAAAATCCT+CGG | + | chr5.4:54434247-54434266 | None:intergenic | 30.0% | |
| ATTTGGTTGTTCTGTATAGA+TGG | - | chr5.4:54431811-54431830 | MS.gene88731:intron | 30.0% | |
| CAAAGATACATAACTACTCA+AGG | + | chr5.4:54432967-54432986 | None:intergenic | 30.0% | |
| CAAAGCTTTACTCTAATAAG+TGG | + | chr5.4:54433280-54433299 | None:intergenic | 30.0% | |
| CAAGTGGTAAAAGATAAATC+TGG | - | chr5.4:54433813-54433832 | MS.gene88731:intron | 30.0% | |
| CACTTATTAGAGTAAAGCTT+TGG | - | chr5.4:54433278-54433297 | MS.gene88731:intron | 30.0% | |
| CGACATGATATACCTATAAT+GGG | + | chr5.4:54432619-54432638 | None:intergenic | 30.0% | |
| GAAGAATTTGGGGAAAAAAT+GGG | + | chr5.4:54430327-54430346 | None:intergenic | 30.0% | |
| GACAAACCAAAAATCACAAA+CGG | + | chr5.4:54431954-54431973 | None:intergenic | 30.0% | |
| GGTAACTAGAAGTTTCAATA+TGG | - | chr5.4:54431607-54431626 | MS.gene88731:CDS | 30.0% | |
| GTCTTTCCATGCATAATTAT+AGG | - | chr5.4:54431237-54431256 | MS.gene88731:intron | 30.0% | |
| GTTCCAATGAACTCTAATTT+GGG | + | chr5.4:54430352-54430371 | None:intergenic | 30.0% | |
| TAAGATAAGTGAATCCAGTT+GGG | + | chr5.4:54432296-54432315 | None:intergenic | 30.0% | |
| TCACTGTGTATTAGTTGTAA+TGG | - | chr5.4:54433354-54433373 | MS.gene88731:intron | 30.0% | |
| TCAGATATCAAAATATGAGC+TGG | - | chr5.4:54432034-54432053 | MS.gene88731:intron | 30.0% | |
| TCAGATATGATGATACAAAG+TGG | - | chr5.4:54432716-54432735 | MS.gene88731:intron | 30.0% | |
| TCGACATATCATATTTCCAA+CGG | - | chr5.4:54431460-54431479 | MS.gene88731:CDS | 30.0% | |
| TCGACATGATATACCTATAA+TGG | + | chr5.4:54432620-54432639 | None:intergenic | 30.0% | |
| TGAAGAATTTGGGGAAAAAA+TGG | + | chr5.4:54430328-54430347 | None:intergenic | 30.0% | |
| TGAATCCCGAAATAAAGATA+AGG | - | chr5.4:54430737-54430756 | MS.gene88731:intron | 30.0% | |
| TGTATTATGTTATCTCTGTG+TGG | - | chr5.4:54433790-54433809 | MS.gene88731:intron | 30.0% | |
| TTAAGAAAGATGAATGACGT+CGG | + | chr5.4:54433028-54433047 | None:intergenic | 30.0% | |
| TTCACAATTCCTCAAATCAA+GGG | + | chr5.4:54432825-54432844 | None:intergenic | 30.0% | |
| TTCACTTATCTTATTGCATG+AGG | - | chr5.4:54432303-54432322 | MS.gene88731:intron | 30.0% | |
| TTCCAATGAACTCTAATTTG+GGG | + | chr5.4:54430351-54430370 | None:intergenic | 30.0% | |
| TTGTTGCAATCTCTAAATTG+GGG | + | chr5.4:54430492-54430511 | None:intergenic | 30.0% | |
| TTTCAAAAAGAAAGCTGATG+AGG | + | chr5.4:54430558-54430577 | None:intergenic | 30.0% | |
| TTTCACAATTCCTCAAATCA+AGG | + | chr5.4:54432826-54432845 | None:intergenic | 30.0% | |
| ! | ATTGCATTTATAGCGTGTTT+TGG | - | chr5.4:54429699-54429718 | MS.gene88731:intron | 30.0% |
| ! | ATTGCCTGTGTTATTGTTAT+TGG | - | chr5.4:54429649-54429668 | MS.gene88731:intron | 30.0% |
| ! | CAAATTTATCCCTTGATTTG+AGG | - | chr5.4:54432813-54432832 | MS.gene88731:intron | 30.0% |
| ! | CATGGAATTTTATGAAACTG+GGG | - | chr5.4:54433982-54434001 | MS.gene88731:CDS | 30.0% |
| ! | CTGTTATTGTATTAAGTTGC+TGG | - | chr5.4:54431704-54431723 | MS.gene88731:intron | 30.0% |
| ! | CTTACTGAGTTGAAGTAAAT+GGG | + | chr5.4:54432512-54432531 | None:intergenic | 30.0% |
| ! | CTTTATTTCGGGATTCATAT+TGG | + | chr5.4:54430734-54430753 | None:intergenic | 30.0% |
| ! | CTTTCTTGATTTCTTGTTGT+AGG | - | chr5.4:54434140-54434159 | MS.gene88731:CDS | 30.0% |
| ! | TAATTTGGGGTGAAGAATTT+GGG | + | chr5.4:54430338-54430357 | None:intergenic | 30.0% |
| ! | TATTGGTTGCTTAAAGCAAT+GGG | - | chr5.4:54433142-54433161 | MS.gene88731:intron | 30.0% |
| ! | TATTTGATTTCACCTATAGG+TGG | - | chr5.4:54430935-54430954 | MS.gene88731:intron | 30.0% |
| ! | TGGTACCTTATCTTTATTTC+GGG | + | chr5.4:54430745-54430764 | None:intergenic | 30.0% |
| ! | TTGATTTCTTGTTGTAGGAA+TGG | - | chr5.4:54434145-54434164 | MS.gene88731:CDS | 30.0% |
| ! | TTTTATTCGGAAATGGTGAA+CGG | + | chr5.4:54429304-54429323 | None:intergenic | 30.0% |
| !! | AACTGTACAAAGAGTATCTT+TGG | - | chr5.4:54432919-54432938 | MS.gene88731:intron | 30.0% |
| !! | ACTGTACAAAGAGTATCTTT+GGG | - | chr5.4:54432920-54432939 | MS.gene88731:intron | 30.0% |
| !! | AGACATTTCTGGTACATATA+TGG | + | chr5.4:54431396-54431415 | None:intergenic | 30.0% |
| !! | AGAGTAAATTTTGATGATCC+TGG | - | chr5.4:54434320-54434339 | MS.gene88731:CDS | 30.0% |
| !! | ATTTTGATATCTGAGGACTT+CGG | + | chr5.4:54432028-54432047 | None:intergenic | 30.0% |
| !! | CCATGTGGTTTGATTTTATT+GGG | - | chr5.4:54430037-54430056 | MS.gene88731:CDS | 30.0% |
| !! | GGTCCTTTAATTTGTTTCAT+TGG | - | chr5.4:54430171-54430190 | MS.gene88731:intron | 30.0% |
| !! | TATGTTGGCTTGATTTCATT+TGG | - | chr5.4:54431319-54431338 | MS.gene88731:intron | 30.0% |
| !! | TTGGATAAACGTCTTATTTG+CGG | + | chr5.4:54429942-54429961 | None:intergenic | 30.0% |
| !!! | AGCTCATATTTTGATATCTG+AGG | + | chr5.4:54432035-54432054 | None:intergenic | 30.0% |
| !!! | GGTTTTTTGTTGTTCTTTCT+TGG | - | chr5.4:54432483-54432502 | MS.gene88731:CDS | 30.0% |
| !!! | TGGTTTTTGTTTTGGACATA+TGG | - | chr5.4:54431627-54431646 | MS.gene88731:CDS | 30.0% |
| !!! | TGTCCTTGTAAGTTTTTTGT+TGG | + | chr5.4:54430782-54430801 | None:intergenic | 30.0% |
| !!! | TTATAGCGTGTTTTGGTTTT+AGG | - | chr5.4:54429706-54429725 | MS.gene88731:intron | 30.0% |
| !!! | TTGTGATTTTTGGTTTGTCT+GGG | - | chr5.4:54431955-54431974 | MS.gene88731:intron | 30.0% |
| !!! | TTTGTGATTTTTGGTTTGTC+TGG | - | chr5.4:54431954-54431973 | MS.gene88731:intron | 30.0% |
| AAAATCCAATTTCCCAATGG+CGG | - | chr5.4:54429320-54429339 | MS.gene88731:CDS | 35.0% | |
| AAAGCCTCAAATTAAGGCTA+GGG | - | chr5.4:54431525-54431544 | MS.gene88731:CDS | 35.0% | |
| AAAGGGCAGCAAGAAAATAT+AGG | + | chr5.4:54434274-54434293 | None:intergenic | 35.0% | |
| AACATTCTTGAATTTGCAGG+GGG | + | chr5.4:54429758-54429777 | None:intergenic | 35.0% | |
| AAGATAAGTGAATCCAGTTG+GGG | + | chr5.4:54432295-54432314 | None:intergenic | 35.0% | |
| ACATTAGATACAGTATCAGG+AGG | + | chr5.4:54433698-54433717 | None:intergenic | 35.0% | |
| ACCACATTAGATACAGTATC+AGG | + | chr5.4:54433701-54433720 | None:intergenic | 35.0% | |
| AGAGTATAGGCAGTAGAAAA+GGG | + | chr5.4:54434291-54434310 | None:intergenic | 35.0% | |
| AGCAACAGATAAAGGAACAA+TGG | + | chr5.4:54429555-54429574 | None:intergenic | 35.0% | |
| AGCAACATTCTTGAATTTGC+AGG | + | chr5.4:54429761-54429780 | None:intergenic | 35.0% | |
| ATGTTTCTTAAATGCGACAC+AGG | - | chr5.4:54432373-54432392 | MS.gene88731:intron | 35.0% | |
| ATTCGAGAAATGGGAATAGA+AGG | + | chr5.4:54432338-54432357 | None:intergenic | 35.0% | |
| ATTGTCGCTGATGTTGTAAT+TGG | - | chr5.4:54432225-54432244 | MS.gene88731:intron | 35.0% | |
| CAACATTCTTGAATTTGCAG+GGG | + | chr5.4:54429759-54429778 | None:intergenic | 35.0% | |
| CAACCATTAGCAACAGATAA+AGG | + | chr5.4:54429563-54429582 | None:intergenic | 35.0% | |
| CAGTCTCACAAAACTTATGT+CGG | + | chr5.4:54429823-54429842 | None:intergenic | 35.0% | |
| CCATTTACTTCAACTCAGTA+AGG | - | chr5.4:54432510-54432529 | MS.gene88731:CDS | 35.0% | |
| CCCAATAAAATCAAACCACA+TGG | + | chr5.4:54430040-54430059 | None:intergenic | 35.0% | |
| CGCTATAAATGCAATTTGCA+AGG | + | chr5.4:54429694-54429713 | None:intergenic | 35.0% | |
| CTAAATTGGGGTGAAGAATT+TGG | + | chr5.4:54430480-54430499 | None:intergenic | 35.0% | |
| CTTAATCTAGGTAGAAAGAC+AGG | + | chr5.4:54434103-54434122 | None:intergenic | 35.0% | |
| CTTTATCTGTTGCTAATGGT+TGG | - | chr5.4:54429561-54429580 | MS.gene88731:intron | 35.0% | |
| GATACATAACTACTCAAGGT+TGG | + | chr5.4:54432963-54432982 | None:intergenic | 35.0% | |
| GCAACATTCTTGAATTTGCA+GGG | + | chr5.4:54429760-54429779 | None:intergenic | 35.0% | |
| GGTTCCAATGAACTCTAATT+TGG | + | chr5.4:54430353-54430372 | None:intergenic | 35.0% | |
| GTTAGGGTTATGGAATATGT+TGG | - | chr5.4:54431304-54431323 | MS.gene88731:intron | 35.0% | |
| GTTCCTTTATCTGTTGCTAA+TGG | - | chr5.4:54429557-54429576 | MS.gene88731:intron | 35.0% | |
| TACTTTCAAAGATGCCAACA+TGG | - | chr5.4:54432135-54432154 | MS.gene88731:intron | 35.0% | |
| TAGAGTATAGGCAGTAGAAA+AGG | + | chr5.4:54434292-54434311 | None:intergenic | 35.0% | |
| TATACGGGAATTGGTAAACT+GGG | + | chr5.4:54430280-54430299 | None:intergenic | 35.0% | |
| TCAAATTAAGGCTAGGGTTT+AGG | - | chr5.4:54431531-54431550 | MS.gene88731:CDS | 35.0% | |
| TCCTGATACTGTATCTAATG+TGG | - | chr5.4:54433697-54433716 | MS.gene88731:intron | 35.0% | |
| TCTTCCTTGCATGAATAACA+TGG | - | chr5.4:54431114-54431133 | MS.gene88731:intron | 35.0% | |
| TGAAGAATTTGGGGGAAAAA+CGG | + | chr5.4:54430375-54430394 | None:intergenic | 35.0% | |
| TGCTTAAAGCAATGGGAATT+AGG | - | chr5.4:54433149-54433168 | MS.gene88731:intron | 35.0% | |
| TGTATAACACCAGAATACTG+TGG | + | chr5.4:54433647-54433666 | None:intergenic | 35.0% | |
| TGTTTCTTAAATGCGACACA+GGG | - | chr5.4:54432374-54432393 | MS.gene88731:intron | 35.0% | |
| TTAAATTTCTTTGCCTCCAC+CGG | + | chr5.4:54432092-54432111 | None:intergenic | 35.0% | |
| TTAATCCCTTGACTTAGTTC+CGG | - | chr5.4:54431425-54431444 | MS.gene88731:CDS | 35.0% | |
| TTATACGGGAATTGGTAAAC+TGG | + | chr5.4:54430281-54430300 | None:intergenic | 35.0% | |
| TTCAAAACCACGAATTTGCA+TGG | - | chr5.4:54430634-54430653 | MS.gene88731:intron | 35.0% | |
| TTTATTCGGAAATGGTGAAC+GGG | + | chr5.4:54429303-54429322 | None:intergenic | 35.0% | |
| TTTGAAAGTAAGCGTCTGAA+AGG | + | chr5.4:54432125-54432144 | None:intergenic | 35.0% | |
| TTTGACCAATGACATGAGTA+GGG | - | chr5.4:54431175-54431194 | MS.gene88731:intron | 35.0% | |
| ! | AATTTGGGGTGAAGAATTTG+GGG | + | chr5.4:54430337-54430356 | None:intergenic | 35.0% |
| ! | ACAAACTAAACACTAGCTTG+TGG | + | chr5.4:54431219-54431238 | None:intergenic | 35.0% |
| ! | CCTTACTGAGTTGAAGTAAA+TGG | + | chr5.4:54432513-54432532 | None:intergenic | 35.0% |
| ! | CTAATTTGGGGTGAAGAATT+TGG | + | chr5.4:54430339-54430358 | None:intergenic | 35.0% |
| ! | CTATTGGTTGCTTAAAGCAA+TGG | - | chr5.4:54433141-54433160 | MS.gene88731:intron | 35.0% |
| ! | GGGTATTTGATTTCACCTAT+AGG | - | chr5.4:54430932-54430951 | MS.gene88731:intron | 35.0% |
| ! | GTAGTGGGATGTATAACTAT+GGG | - | chr5.4:54434060-54434079 | MS.gene88731:CDS | 35.0% |
| ! | TTAGTCTTTGATGGATGGAA+AGG | + | chr5.4:54430209-54430228 | None:intergenic | 35.0% |
| ! | TTTGGGAGAATTTGAGATAG+AGG | - | chr5.4:54432937-54432956 | MS.gene88731:intron | 35.0% |
| !! | ATTGACTCGTAAGATTATGC+AGG | - | chr5.4:54432751-54432770 | MS.gene88731:intron | 35.0% |
| !! | CAGTATTCTGGTGTTATACA+TGG | - | chr5.4:54433647-54433666 | MS.gene88731:intron | 35.0% |
| !! | CTAACGTTGTTAGTCTTTGA+TGG | + | chr5.4:54430218-54430237 | None:intergenic | 35.0% |
| !! | GCCATGTGGTTTGATTTTAT+TGG | - | chr5.4:54430036-54430055 | MS.gene88731:CDS | 35.0% |
| !! | GGTTTTCGTGGTTTTTGATT+TGG | - | chr5.4:54430888-54430907 | MS.gene88731:CDS | 35.0% |
| !! | TAAACCCTAGCCTTAATTTG+AGG | + | chr5.4:54431532-54431551 | None:intergenic | 35.0% |
| !! | TGTTGGCTTAAAGACCTTTA+TGG | + | chr5.4:54430765-54430784 | None:intergenic | 35.0% |
| !!! | GGATTTTTTGTTGAGCTAGT+TGG | - | chr5.4:54434215-54434234 | MS.gene88731:CDS | 35.0% |
| AAAGTAAGCGTCTGAAAGGA+GGG | + | chr5.4:54432121-54432140 | None:intergenic | 40.0% | |
| AAATCACTCGCAGACATTTC+TGG | + | chr5.4:54431407-54431426 | None:intergenic | 40.0% | |
| AACCACGAATTTGCATGGAA+AGG | - | chr5.4:54430639-54430658 | MS.gene88731:intron | 40.0% | |
| AACGTTAGCTACAGTATACG+TGG | - | chr5.4:54430230-54430249 | MS.gene88731:intron | 40.0% | |
| AATTAAGGCTAGGGTTTAGG+CGG | - | chr5.4:54431534-54431553 | MS.gene88731:CDS | 40.0% | |
| ACCAAAGGATTTCAAGCCAA+AGG | + | chr5.4:54433497-54433516 | None:intergenic | 40.0% | |
| AGATCCATGCGAATTTGTGT+TGG | + | chr5.4:54430609-54430628 | None:intergenic | 40.0% | |
| AGGTATATCATGTCGATCTC+AGG | - | chr5.4:54432624-54432643 | MS.gene88731:intron | 40.0% | |
| ATAATTGGAACAGTTGGAGC+TGG | - | chr5.4:54434194-54434213 | MS.gene88731:CDS | 40.0% | |
| ATCGTTGAACAATGGTGCAA+AGG | - | chr5.4:54430577-54430596 | MS.gene88731:intron | 40.0% | |
| ATGGATGGAAAGGACTAATG+TGG | + | chr5.4:54430199-54430218 | None:intergenic | 40.0% | |
| ATGGTTTCCTCAAACTGAAC+GGG | - | chr5.4:54431830-54431849 | MS.gene88731:intron | 40.0% | |
| ATTTGACATGTCAGCGCAAA+TGG | + | chr5.4:54430525-54430544 | None:intergenic | 40.0% | |
| CAAAGCCTCAAATTAAGGCT+AGG | - | chr5.4:54431524-54431543 | MS.gene88731:CDS | 40.0% | |
| CACCCCAAATTAGAGTTCAT+TGG | - | chr5.4:54430346-54430365 | MS.gene88731:intron | 40.0% | |
| CAGGCAATTCATCAAACAGT+TGG | + | chr5.4:54429637-54429656 | None:intergenic | 40.0% | |
| CATATTCCATAACCCTAACC+CGG | + | chr5.4:54431303-54431322 | None:intergenic | 40.0% | |
| CGGATATATCTTGGACAGTA+TGG | - | chr5.4:54431554-54431573 | MS.gene88731:CDS | 40.0% | |
| CTAAACCCTACTCATGTCAT+TGG | + | chr5.4:54431183-54431202 | None:intergenic | 40.0% | |
| GAAGAATTTGGGGGAAAAAC+GGG | + | chr5.4:54430374-54430393 | None:intergenic | 40.0% | |
| GACGACAAGTAAAGCCAAAA+GGG | + | chr5.4:54431062-54431081 | None:intergenic | 40.0% | |
| GAGCTCAAAGCCTCAAATTA+AGG | - | chr5.4:54431519-54431538 | MS.gene88731:CDS | 40.0% | |
| GATGGTTTCCTCAAACTGAA+CGG | - | chr5.4:54431829-54431848 | MS.gene88731:intron | 40.0% | |
| GCAGCACCTATAATTATGCA+TGG | + | chr5.4:54431246-54431265 | None:intergenic | 40.0% | |
| GCTGACATGTCAAATTCATG+AGG | - | chr5.4:54430530-54430549 | MS.gene88731:intron | 40.0% | |
| GCTGCTATAATTGGAACAGT+TGG | - | chr5.4:54434188-54434207 | MS.gene88731:CDS | 40.0% | |
| GCTTAGAGCTAGAGTGATTA+TGG | + | chr5.4:54431487-54431506 | None:intergenic | 40.0% | |
| GTGATGAACTCAGTGAAACT+CGG | + | chr5.4:54429452-54429471 | None:intergenic | 40.0% | |
| GTTTGACCAATGACATGAGT+AGG | - | chr5.4:54431174-54431193 | MS.gene88731:intron | 40.0% | |
| TCAATATACGACATGCCCTT+TGG | - | chr5.4:54431678-54431697 | MS.gene88731:CDS | 40.0% | |
| TCCTTGCATGAATAACATGG+TGG | - | chr5.4:54431117-54431136 | MS.gene88731:intron | 40.0% | |
| TCGTTGAACAATGGTGCAAA+GGG | - | chr5.4:54430578-54430597 | MS.gene88731:intron | 40.0% | |
| TGCAGGTATGTTACACACAT+TGG | - | chr5.4:54432768-54432787 | MS.gene88731:intron | 40.0% | |
| TGGATTTCTCGTGAACTTTC+AGG | - | chr5.4:54433522-54433541 | MS.gene88731:intron | 40.0% | |
| TTCTACTGCCTATACTCTAC+AGG | - | chr5.4:54434293-54434312 | MS.gene88731:CDS | 40.0% | |
| TTGAAATCCTTTGGTCACTC+TGG | - | chr5.4:54433502-54433521 | MS.gene88731:intron | 40.0% | |
| TTGATTTCACCTATAGGTGG+AGG | - | chr5.4:54430938-54430957 | MS.gene88731:intron | 40.0% | |
| TTGCAGTTGCTAAACCAATG+AGG | + | chr5.4:54433438-54433457 | None:intergenic | 40.0% | |
| TTGGGCTACGTATGATGTAA+CGG | - | chr5.4:54430055-54430074 | MS.gene88731:CDS | 40.0% | |
| TTTGACATGTCAGCGCAAAT+GGG | + | chr5.4:54430524-54430543 | None:intergenic | 40.0% | |
| ! | AAGACAAACATCTTTTCCGG+TGG | - | chr5.4:54432073-54432092 | MS.gene88731:intron | 40.0% |
| ! | ATGCAGTCTTCTTTTCTGTG+GGG | - | chr5.4:54430911-54430930 | MS.gene88731:intron | 40.0% |
| ! | ATGTTGGTGGATAACTATGG+TGG | - | chr5.4:54430962-54430981 | MS.gene88731:intron | 40.0% |
| ! | ATTTGGGGTGAAGAATTTGG+GGG | + | chr5.4:54430336-54430355 | None:intergenic | 40.0% |
| ! | CTATGGTGGAAAAGTGGTAA+TGG | - | chr5.4:54430976-54430995 | MS.gene88731:intron | 40.0% |
| ! | GATGCAGTCTTCTTTTCTGT+GGG | - | chr5.4:54430910-54430929 | MS.gene88731:intron | 40.0% |
| ! | GCTTCAGTTTTCTCTGCTAT+TGG | - | chr5.4:54433125-54433144 | MS.gene88731:intron | 40.0% |
| ! | GGAACACTTGCTGCTATAAT+TGG | - | chr5.4:54434179-54434198 | MS.gene88731:CDS | 40.0% |
| ! | GGAATGTTGGTGGATAACTA+TGG | - | chr5.4:54430959-54430978 | MS.gene88731:intron | 40.0% |
| ! | GGATAACTATGGTGGAAAAG+TGG | - | chr5.4:54430970-54430989 | MS.gene88731:intron | 40.0% |
| ! | GTGGCCAGGTATTCAAATTT+TGG | - | chr5.4:54431136-54431155 | MS.gene88731:intron | 40.0% |
| ! | GTTGAAGCTGTTGTTGTTGT+TGG | + | chr5.4:54429430-54429449 | None:intergenic | 40.0% |
| ! | TGGTTTGTCTGGGTTTCTTT+GGG | - | chr5.4:54431965-54431984 | MS.gene88731:intron | 40.0% |
| ! | TTAAGTTGCTGGAGCAAGAA+CGG | - | chr5.4:54431715-54431734 | MS.gene88731:intron | 40.0% |
| ! | TTGTTGCATGATGGTTTTCG+TGG | - | chr5.4:54430876-54430895 | MS.gene88731:CDS | 40.0% |
| ! | TTTGGCCCGTTTGTGATTTT+TGG | - | chr5.4:54431945-54431964 | MS.gene88731:intron | 40.0% |
| !! | CGTTGTTAGTCTTTGATGGA+TGG | + | chr5.4:54430214-54430233 | None:intergenic | 40.0% |
| !! | GGTAGTGGGATGTATAACTA+TGG | - | chr5.4:54434059-54434078 | MS.gene88731:CDS | 40.0% |
| !! | TGGAAAAGTGGTAATGGCTT+GGG | - | chr5.4:54430982-54431001 | MS.gene88731:intron | 40.0% |
| !! | TTGGTTTGTCTGGGTTTCTT+TGG | - | chr5.4:54431964-54431983 | MS.gene88731:intron | 40.0% |
| !!! | TGGTTTTTGGGTAATGTTGG+TGG | + | chr5.4:54429236-54429255 | None:intergenic | 40.0% |
| !!! | TTGTTGGTGGTGGTTGTTTT+CGG | + | chr5.4:54429414-54429433 | None:intergenic | 40.0% |
| AAACCAATGAGGCTAACTCC+AGG | + | chr5.4:54433427-54433446 | None:intergenic | 45.0% | |
| AAATTTGCCAAGCTGTGCCA+TGG | - | chr5.4:54433933-54433952 | MS.gene88731:intron | 45.0% | |
| AACCAAGTGCTCTCGTGTTT+CGG | + | chr5.4:54433180-54433199 | None:intergenic | 45.0% | |
| AAGCATTACCCAGCTATGCA+TGG | + | chr5.4:54432180-54432199 | None:intergenic | 45.0% | |
| AAGCTGACGTCAAGGACTAA+GGG | + | chr5.4:54430011-54430030 | None:intergenic | 45.0% | |
| AAGGGCTGTTGGAATTTCGA+TGG | - | chr5.4:54431854-54431873 | MS.gene88731:intron | 45.0% | |
| ACCAACATTCCTCCACCTAT+AGG | + | chr5.4:54430950-54430969 | None:intergenic | 45.0% | |
| ACCTATAGGTGGAGGAATGT+TGG | - | chr5.4:54430946-54430965 | MS.gene88731:intron | 45.0% | |
| AGATGAATGACGTCGGAACT+TGG | + | chr5.4:54433021-54433040 | None:intergenic | 45.0% | |
| ATATCATGTCGATCTCAGGC+AGG | - | chr5.4:54432628-54432647 | MS.gene88731:intron | 45.0% | |
| ATGATAGCCATCACAACCCA+TGG | + | chr5.4:54432674-54432693 | None:intergenic | 45.0% | |
| ATGTCGCAAGGCGGTATATT+TGG | - | chr5.4:54431927-54431946 | MS.gene88731:intron | 45.0% | |
| ATGTGAGCCTCATTAATGCC+GGG | - | chr5.4:54431282-54431301 | MS.gene88731:intron | 45.0% | |
| CACTTCTGAACGAGTCAAAG+TGG | - | chr5.4:54429469-54429488 | MS.gene88731:intron | 45.0% | |
| CTAGAGTGATTATGGACCGT+TGG | + | chr5.4:54431479-54431498 | None:intergenic | 45.0% | |
| CTCTCTCTCCTGTAGAGTAT+AGG | + | chr5.4:54434304-54434323 | None:intergenic | 45.0% | |
| CTGGGGCTAATACAACACTT+AGG | - | chr5.4:54433999-54434018 | MS.gene88731:CDS | 45.0% | |
| CTTTGAGCTCTTTCGCCTAA+TGG | + | chr5.4:54431509-54431528 | None:intergenic | 45.0% | |
| GAAAGTAAGCGTCTGAAAGG+AGG | + | chr5.4:54432122-54432141 | None:intergenic | 45.0% | |
| GAACGGGTGAAGTTGAGTTT+GGG | + | chr5.4:54429287-54429306 | None:intergenic | 45.0% | |
| GAATTGGTAAACTGGGTAGG+AGG | + | chr5.4:54430273-54430292 | None:intergenic | 45.0% | |
| GAGAAATCCAGAGTGACCAA+AGG | + | chr5.4:54433512-54433531 | None:intergenic | 45.0% | |
| GATGTGAGCCTCATTAATGC+CGG | - | chr5.4:54431281-54431300 | MS.gene88731:intron | 45.0% | |
| GCATCCAACACAAATTCGCA+TGG | - | chr5.4:54430602-54430621 | MS.gene88731:intron | 45.0% | |
| GCCACCATGTTATTCATGCA+AGG | + | chr5.4:54431121-54431140 | None:intergenic | 45.0% | |
| GCTATCATGAACTACCTTGC+TGG | - | chr5.4:54432686-54432705 | MS.gene88731:intron | 45.0% | |
| GGACGACAAGTAAAGCCAAA+AGG | + | chr5.4:54431063-54431082 | None:intergenic | 45.0% | |
| GGGTTTAGGCGGATATATCT+TGG | - | chr5.4:54431545-54431564 | MS.gene88731:CDS | 45.0% | |
| GTAGGAATGGCAAATACTGC+TGG | - | chr5.4:54434158-54434177 | MS.gene88731:CDS | 45.0% | |
| GTCCTTTCCATGCAAATTCG+TGG | + | chr5.4:54430644-54430663 | None:intergenic | 45.0% | |
| TAAGCTGACGTCAAGGACTA+AGG | + | chr5.4:54430012-54430031 | None:intergenic | 45.0% | |
| TACACGATCAGCGTTACAGA+GGG | + | chr5.4:54429519-54429538 | None:intergenic | 45.0% | |
| TATAGGTGGAGGAATGTTGG+TGG | - | chr5.4:54430949-54430968 | MS.gene88731:intron | 45.0% | |
| TATCTGACCAAAAGCCAGCA+AGG | + | chr5.4:54432703-54432722 | None:intergenic | 45.0% | |
| TCAAGGACTAAGGGTCTGTT+TGG | + | chr5.4:54430002-54430021 | None:intergenic | 45.0% | |
| TCCAGGACCAACAAAACCAA+TGG | + | chr5.4:54433410-54433429 | None:intergenic | 45.0% | |
| TCCAGTTGGGGCATAACAAA+TGG | + | chr5.4:54432283-54432302 | None:intergenic | 45.0% | |
| TGAACGGGTGAAGTTGAGTT+TGG | + | chr5.4:54429288-54429307 | None:intergenic | 45.0% | |
| TGAAGTTGAGTTTGGGTGAG+TGG | + | chr5.4:54429280-54429299 | None:intergenic | 45.0% | |
| TGAGTGGAAGTTGGAGAGTA+CGG | + | chr5.4:54429264-54429283 | None:intergenic | 45.0% | |
| TGTTATCTCTGTGTGGCAAG+TGG | - | chr5.4:54433797-54433816 | MS.gene88731:intron | 45.0% | |
| TTAGTTCCCGCACTAGCAAA+TGG | + | chr5.4:54433871-54433890 | None:intergenic | 45.0% | |
| TTCAGCTTGGATGTGCGATA+GGG | - | chr5.4:54431883-54431902 | MS.gene88731:intron | 45.0% | |
| TTCTGAACGAGTCAAAGTGG+TGG | - | chr5.4:54429472-54429491 | MS.gene88731:intron | 45.0% | |
| TTGACATGTCAGCGCAAATG+GGG | + | chr5.4:54430523-54430542 | None:intergenic | 45.0% | |
| TTGCATGGAAAGGACTAACG+TGG | - | chr5.4:54430649-54430668 | MS.gene88731:intron | 45.0% | |
| TTTCAGCTTGGATGTGCGAT+AGG | - | chr5.4:54431882-54431901 | MS.gene88731:intron | 45.0% | |
| ! | ACAAACATCTTTTCCGGTGG+AGG | - | chr5.4:54432076-54432095 | MS.gene88731:intron | 45.0% |
| ! | ATGTCCTCCGCCATCATTTT+CGG | - | chr5.4:54429191-54429210 | MS.gene88731:CDS | 45.0% |
| ! | ATTCCATGAACGTTTTCGCC+AGG | + | chr5.4:54433970-54433989 | None:intergenic | 45.0% |
| ! | GAAGCTGTTGTTGTTGTTGG+TGG | + | chr5.4:54429427-54429446 | None:intergenic | 45.0% |
| ! | GGATGCAGTCTTCTTTTCTG+TGG | - | chr5.4:54430909-54430928 | MS.gene88731:intron | 45.0% |
| ! | GGTAGTTCCATTTGCTAGTG+CGG | - | chr5.4:54433861-54433880 | MS.gene88731:intron | 45.0% |
| ! | GTAGTTCCATTTGCTAGTGC+GGG | - | chr5.4:54433862-54433881 | MS.gene88731:intron | 45.0% |
| ! | TGCAGTCTTCTTTTCTGTGG+GGG | - | chr5.4:54430912-54430931 | MS.gene88731:intron | 45.0% |
| ! | TTAATGCCGGGTTAGGGTTA+TGG | - | chr5.4:54431294-54431313 | MS.gene88731:intron | 45.0% |
| ! | TTGGTTTAGTGCCGTTCCAT+GGG | - | chr5.4:54432655-54432674 | MS.gene88731:intron | 45.0% |
| !! | CACTCTAGCTCTAAGCCATT+AGG | - | chr5.4:54431491-54431510 | MS.gene88731:CDS | 45.0% |
| !! | CGCTTTCTCTGGAATTGTTC+AGG | - | chr5.4:54429589-54429608 | MS.gene88731:intron | 45.0% |
| !! | GCCTTTGGCTTGAAATCCTT+TGG | - | chr5.4:54433493-54433512 | MS.gene88731:intron | 45.0% |
| !! | GGAAAAGTGGTAATGGCTTG+GGG | - | chr5.4:54430983-54431002 | MS.gene88731:intron | 45.0% |
| !! | GGGTAATGTTGGTGGTTTAG+CGG | + | chr5.4:54429228-54429247 | None:intergenic | 45.0% |
| !! | GTGGAAAAGTGGTAATGGCT+TGG | - | chr5.4:54430981-54431000 | MS.gene88731:intron | 45.0% |
| !! | TAATGTTGGTGGTTTAGCGG+CGG | + | chr5.4:54429225-54429244 | None:intergenic | 45.0% |
| !!! | CGGTGGTTTTTGGGTAATGT+TGG | + | chr5.4:54429239-54429258 | None:intergenic | 45.0% |
| !!! | CTGCAGTCCATTGGTTTTGT+TGG | - | chr5.4:54433400-54433419 | MS.gene88731:intron | 45.0% |
| !!! | TCCATTGGTTTTGTTGGTCC+TGG | - | chr5.4:54433406-54433425 | MS.gene88731:intron | 45.0% |
| !!! | TGAACTACCTTGCTGGCTTT+TGG | - | chr5.4:54432693-54432712 | MS.gene88731:intron | 45.0% |
| !!! | TGTTGGTGGTGGTTGTTTTC+GGG | + | chr5.4:54429413-54429432 | None:intergenic | 45.0% |
| !! | CTTATTAAAAATAAAAAAAA+AGG | + | chr5.4:54430708-54430727 | None:intergenic | 5.0% |
| !!! | CTTTTTTTTTATTTTTAATA+AGG | - | chr5.4:54430706-54430725 | MS.gene88731:intron | 5.0% |
| AACCAGCCGGAACTAAGTCA+AGG | + | chr5.4:54431434-54431453 | None:intergenic | 50.0% | |
| ACACCTGGCGAAAACGTTCA+TGG | - | chr5.4:54433964-54433983 | MS.gene88731:CDS | 50.0% | |
| ACCAGCCGGAACTAAGTCAA+GGG | + | chr5.4:54431433-54431452 | None:intergenic | 50.0% | |
| ACCCTAACCCGGCATTAATG+AGG | + | chr5.4:54431292-54431311 | None:intergenic | 50.0% | |
| AGCCAAGCAGAAGCAACTGA+GGG | + | chr5.4:54433466-54433485 | None:intergenic | 50.0% | |
| AGCCATCACAACCCATGGAA+CGG | + | chr5.4:54432669-54432688 | None:intergenic | 50.0% | |
| AGCCTCATTAATGCCGGGTT+AGG | - | chr5.4:54431287-54431306 | MS.gene88731:intron | 50.0% | |
| CAGCTAGACCAAGCAAAGCA+CGG | + | chr5.4:54431084-54431103 | None:intergenic | 50.0% | |
| CGGGAATTGGTAAACTGGGT+AGG | + | chr5.4:54430276-54430295 | None:intergenic | 50.0% | |
| CGTCAGCTTATTGAGCCATG+TGG | - | chr5.4:54430022-54430041 | MS.gene88731:CDS | 50.0% | |
| CTACACGATCAGCGTTACAG+AGG | + | chr5.4:54429520-54429539 | None:intergenic | 50.0% | |
| GAGATCGCACCACAGTATTC+TGG | - | chr5.4:54433635-54433654 | MS.gene88731:intron | 50.0% | |
| GAGTTTGGGTGAGTGGAAGT+TGG | + | chr5.4:54429273-54429292 | None:intergenic | 50.0% | |
| GATATCTGAGGACTTCGGTC+AGG | + | chr5.4:54432023-54432042 | None:intergenic | 50.0% | |
| GCAGCGATTAGAGACCATGT+TGG | + | chr5.4:54432152-54432171 | None:intergenic | 50.0% | |
| GCATGAATAACATGGTGGCC+AGG | - | chr5.4:54431122-54431141 | MS.gene88731:intron | 50.0% | |
| GCCAGGTGTTTATACCACCA+TGG | + | chr5.4:54433953-54433972 | None:intergenic | 50.0% | |
| GCCATGGTGGTATAAACACC+TGG | - | chr5.4:54433949-54433968 | MS.gene88731:CDS | 50.0% | |
| GCCTCATTAATGCCGGGTTA+GGG | - | chr5.4:54431288-54431307 | MS.gene88731:intron | 50.0% | |
| GCTCATTCACTGCAGTCCAT+TGG | - | chr5.4:54433391-54433410 | MS.gene88731:intron | 50.0% | |
| GCTGTTGGAATTTCGATGGC+TGG | - | chr5.4:54431858-54431877 | MS.gene88731:intron | 50.0% | |
| GCTTTGCTTGGTCTAGCTGA+AGG | - | chr5.4:54431085-54431104 | MS.gene88731:intron | 50.0% | |
| GGCTCAATAAGCTGACGTCA+AGG | + | chr5.4:54430019-54430038 | None:intergenic | 50.0% | |
| GTCTGGGTTTCTTTGGGTGT+TGG | - | chr5.4:54431971-54431990 | MS.gene88731:intron | 50.0% | |
| TAGCCAAGCAGAAGCAACTG+AGG | + | chr5.4:54433467-54433486 | None:intergenic | 50.0% | |
| TATACCACCATGGCACAGCT+TGG | + | chr5.4:54433943-54433962 | None:intergenic | 50.0% | |
| TCCTCAAACTGAACGGGCAA+GGG | - | chr5.4:54431836-54431855 | MS.gene88731:intron | 50.0% | |
| TCGATGGCTGGATTTCAGCT+TGG | - | chr5.4:54431870-54431889 | MS.gene88731:intron | 50.0% | |
| TCTCCCATTCTCATGTCGCA+AGG | - | chr5.4:54431915-54431934 | MS.gene88731:intron | 50.0% | |
| TGCAAACGCCATGCATAGCT+GGG | - | chr5.4:54432169-54432188 | MS.gene88731:intron | 50.0% | |
| TTCCTCAAACTGAACGGGCA+AGG | - | chr5.4:54431835-54431854 | MS.gene88731:intron | 50.0% | |
| ! | AGTACGGTGCGGTGGTTTTT+GGG | + | chr5.4:54429248-54429267 | None:intergenic | 50.0% |
| ! | CTTGGTTTAGTGCCGTTCCA+TGG | - | chr5.4:54432654-54432673 | MS.gene88731:intron | 50.0% |
| ! | GAGCGTCGTTGGAAGAAACA+CGG | + | chr5.4:54429376-54429395 | None:intergenic | 50.0% |
| ! | GAGCTAGTTGGTTCATTCCG+AGG | - | chr5.4:54434227-54434246 | MS.gene88731:CDS | 50.0% |
| ! | GCTGTTGTTGTTGTTGGTGG+TGG | + | chr5.4:54429424-54429443 | None:intergenic | 50.0% |
| ! | TGAGTTGAACTGAGCGTCGT+TGG | + | chr5.4:54429387-54429406 | None:intergenic | 50.0% |
| !! | GCCATTTGTTATGCCCCAAC+TGG | - | chr5.4:54432279-54432298 | MS.gene88731:intron | 50.0% |
| !! | GGTTTCTTTGGGTGTTGGTC+TGG | - | chr5.4:54431976-54431995 | MS.gene88731:intron | 50.0% |
| !! | TTCCGAAACACGAGAGCACT+TGG | - | chr5.4:54433175-54433194 | MS.gene88731:intron | 50.0% |
| AAGAAACACGGAGGCGGAGA+AGG | + | chr5.4:54429364-54429383 | None:intergenic | 55.0% | |
| AAGGGAAGTCTCTGCAGCGA+AGG | + | chr5.4:54431044-54431063 | None:intergenic | 55.0% | |
| ACCCCTCAGTTGCTTCTGCT+TGG | - | chr5.4:54433461-54433480 | MS.gene88731:intron | 55.0% | |
| ACCGCCTTGCGACATGAGAA+TGG | + | chr5.4:54431922-54431941 | None:intergenic | 55.0% | |
| AGAAACACGGAGGCGGAGAA+GGG | + | chr5.4:54429363-54429382 | None:intergenic | 55.0% | |
| AGGGAAGTCTCTGCAGCGAA+GGG | + | chr5.4:54431043-54431062 | None:intergenic | 55.0% | |
| ATGTCGAACACGCAACCAGC+CGG | + | chr5.4:54431447-54431466 | None:intergenic | 55.0% | |
| CAGAGCCGCCATTGGGAAAT+TGG | + | chr5.4:54429328-54429347 | None:intergenic | 55.0% | |
| CCCATTCTCATGTCGCAAGG+CGG | - | chr5.4:54431918-54431937 | MS.gene88731:intron | 55.0% | |
| CCGCCTTGCGACATGAGAAT+GGG | + | chr5.4:54431921-54431940 | None:intergenic | 55.0% | |
| CGTCGTTGGAAGAAACACGG+AGG | + | chr5.4:54429373-54429392 | None:intergenic | 55.0% | |
| CGTTGGAAGAAACACGGAGG+CGG | + | chr5.4:54429370-54429389 | None:intergenic | 55.0% | |
| CTGCAAACGCCATGCATAGC+TGG | - | chr5.4:54432168-54432187 | MS.gene88731:intron | 55.0% | |
| CTTGTCGTCCGTGCTTTGCT+TGG | - | chr5.4:54431073-54431092 | MS.gene88731:intron | 55.0% | |
| GCCAAGCAGAAGCAACTGAG+GGG | + | chr5.4:54433465-54433484 | None:intergenic | 55.0% | |
| GCTTGGTCTAGCTGAAGGTG+TGG | - | chr5.4:54431090-54431109 | MS.gene88731:intron | 55.0% | |
| GGTTGCTCCGCCGAAAATGA+TGG | + | chr5.4:54429204-54429223 | None:intergenic | 55.0% | |
| TCCCTTGACTTAGTTCCGGC+TGG | - | chr5.4:54431429-54431448 | MS.gene88731:CDS | 55.0% | |
| TGCTCCGCCGAAAATGATGG+CGG | + | chr5.4:54429201-54429220 | None:intergenic | 55.0% | |
| TTTGCCAAGCTGTGCCATGG+TGG | - | chr5.4:54433936-54433955 | MS.gene88731:CDS | 55.0% | |
| ! | CGCTGCAGAGACTTCCCTTT+TGG | - | chr5.4:54431045-54431064 | MS.gene88731:CDS | 55.0% |
| ! | GAGTACGGTGCGGTGGTTTT+TGG | + | chr5.4:54429249-54429268 | None:intergenic | 55.0% |
| ! | GGAAGTTGGAGAGTACGGTG+CGG | + | chr5.4:54429259-54429278 | None:intergenic | 55.0% |
| ! | GGTCCTGGAGTTAGCCTCAT+TGG | - | chr5.4:54433421-54433440 | MS.gene88731:intron | 55.0% |
| ! | TCCTCCGCCATCATTTTCGG+CGG | - | chr5.4:54429194-54429213 | MS.gene88731:CDS | 55.0% |
| ! | TGCCGTTCCATGGGTTGTGA+TGG | - | chr5.4:54432664-54432683 | MS.gene88731:intron | 55.0% |
| ! | TGGCTTGGGGTGTAGCATTG+TGG | - | chr5.4:54430996-54431015 | MS.gene88731:intron | 55.0% |
| ACTGAACGGGCAAGGGCTGT+TGG | - | chr5.4:54431843-54431862 | MS.gene88731:intron | 60.0% | |
| AGAGAGGCAGAGCCGCCATT+GGG | + | chr5.4:54429335-54429354 | None:intergenic | 60.0% | |
| GCCCTTGCCCGTTCAGTTTG+AGG | + | chr5.4:54431840-54431859 | None:intergenic | 60.0% | |
| GGTTGGACTCGCGCTTTCTC+TGG | - | chr5.4:54429578-54429597 | MS.gene88731:intron | 60.0% | |
| TCGATCTCAGGCAGGCAGCT+TGG | - | chr5.4:54432636-54432655 | MS.gene88731:intron | 60.0% | |
| ! | AGTGGTGGCGATGCTCGCTT+TGG | - | chr5.4:54429487-54429506 | MS.gene88731:intron | 60.0% |
| ! | AGTTGGAGAGTACGGTGCGG+TGG | + | chr5.4:54429256-54429275 | None:intergenic | 60.0% |
| !! | TCCGCCGAAAATGATGGCGG+AGG | + | chr5.4:54429198-54429217 | None:intergenic | 60.0% |
| GAGAGAGGCAGAGCCGCCAT+TGG | + | chr5.4:54429336-54429355 | None:intergenic | 65.0% | |
| CACGGAGGCGGAGAAGGGAG+CGG | + | chr5.4:54429358-54429377 | None:intergenic | 70.0% | |
| GCGGAGAAGGGAGCGGAGAG+AGG | + | chr5.4:54429351-54429370 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 54429191 | 54434355 | 54429191 | ID=MS.gene88731 |
| chr5.4 | mRNA | 54429191 | 54434355 | 54429191 | ID=MS.gene88731.t1;Parent=MS.gene88731 |
| chr5.4 | exon | 54433936 | 54434355 | 54433936 | ID=MS.gene88731.t1.exon1;Parent=MS.gene88731.t1 |
| chr5.4 | CDS | 54433936 | 54434355 | 54433936 | ID=cds.MS.gene88731.t1;Parent=MS.gene88731.t1 |
| chr5.4 | exon | 54432403 | 54432629 | 54432403 | ID=MS.gene88731.t1.exon2;Parent=MS.gene88731.t1 |
| chr5.4 | CDS | 54432403 | 54432629 | 54432403 | ID=cds.MS.gene88731.t1;Parent=MS.gene88731.t1 |
| chr5.4 | exon | 54431356 | 54431716 | 54431356 | ID=MS.gene88731.t1.exon3;Parent=MS.gene88731.t1 |
| chr5.4 | CDS | 54431356 | 54431716 | 54431356 | ID=cds.MS.gene88731.t1;Parent=MS.gene88731.t1 |
| chr5.4 | exon | 54431020 | 54431064 | 54431020 | ID=MS.gene88731.t1.exon4;Parent=MS.gene88731.t1 |
| chr5.4 | CDS | 54431020 | 54431064 | 54431020 | ID=cds.MS.gene88731.t1;Parent=MS.gene88731.t1 |
| chr5.4 | exon | 54430774 | 54430920 | 54430774 | ID=MS.gene88731.t1.exon5;Parent=MS.gene88731.t1 |
| chr5.4 | CDS | 54430774 | 54430920 | 54430774 | ID=cds.MS.gene88731.t1;Parent=MS.gene88731.t1 |
| chr5.4 | exon | 54430003 | 54430140 | 54430003 | ID=MS.gene88731.t1.exon6;Parent=MS.gene88731.t1 |
| chr5.4 | CDS | 54430003 | 54430140 | 54430003 | ID=cds.MS.gene88731.t1;Parent=MS.gene88731.t1 |
| chr5.4 | exon | 54429878 | 54429911 | 54429878 | ID=MS.gene88731.t1.exon7;Parent=MS.gene88731.t1 |
| chr5.4 | CDS | 54429878 | 54429911 | 54429878 | ID=cds.MS.gene88731.t1;Parent=MS.gene88731.t1 |
| chr5.4 | exon | 54429191 | 54429384 | 54429191 | ID=MS.gene88731.t1.exon8;Parent=MS.gene88731.t1 |
| chr5.4 | CDS | 54429191 | 54429384 | 54429191 | ID=cds.MS.gene88731.t1;Parent=MS.gene88731.t1 |
| Gene Sequence |
| Protein sequence |
