Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88956.t1 | RHN51483.1 | 57 | 279 | 96 | 3 | 188 | 443 | 339 | 616 | 2.50E-84 | 322.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88956.t1 | A0A396HFX6 | 57.0 | 279 | 96 | 3 | 188 | 443 | 339 | 616 | 1.8e-84 | 322.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052586 | MS.gene88956 | 0.806894 | 6.59E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88956.t1 | MTR_0002s1270 | 52.381 | 336 | 107 | 5 | 154 | 445 | 74 | 400 | 5.43e-116 | 345 |
| MS.gene88956.t1 | MTR_7g046380 | 51.235 | 324 | 105 | 5 | 154 | 433 | 82 | 396 | 4.98e-108 | 325 |
| MS.gene88956.t1 | MTR_5g077900 | 65.556 | 180 | 62 | 0 | 266 | 445 | 47 | 226 | 4.63e-87 | 265 |
| MS.gene88956.t1 | MTR_2g092960 | 40.678 | 177 | 100 | 2 | 266 | 441 | 1043 | 1215 | 8.40e-37 | 144 |
| MS.gene88956.t1 | MTR_8g051620 | 90.000 | 60 | 6 | 0 | 269 | 328 | 50 | 109 | 1.48e-32 | 120 |
| MS.gene88956.t1 | MTR_8g051620 | 59.259 | 108 | 5 | 1 | 259 | 327 | 1 | 108 | 1.49e-32 | 119 |
| MS.gene88956.t1 | MTR_0462s0020 | 36.782 | 174 | 104 | 2 | 270 | 441 | 122 | 291 | 2.94e-32 | 124 |
| MS.gene88956.t1 | MTR_2g037270 | 35.714 | 182 | 110 | 3 | 266 | 444 | 511 | 688 | 4.92e-30 | 123 |
| MS.gene88956.t1 | MTR_8g017000 | 35.556 | 180 | 109 | 3 | 266 | 442 | 511 | 686 | 9.35e-30 | 122 |
| MS.gene88956.t1 | MTR_0057s0200 | 80.702 | 57 | 11 | 0 | 387 | 443 | 1 | 57 | 3.80e-27 | 103 |
| MS.gene88956.t1 | MTR_3g011560 | 33.333 | 180 | 104 | 3 | 266 | 444 | 511 | 675 | 1.28e-25 | 110 |
| MS.gene88956.t1 | MTR_4g066320 | 52.427 | 103 | 44 | 3 | 346 | 444 | 19 | 120 | 3.08e-23 | 94.7 |
| MS.gene88956.t1 | MTR_2g099155 | 34.483 | 174 | 76 | 3 | 13 | 153 | 37 | 205 | 1.44e-22 | 96.7 |
| MS.gene88956.t1 | MTR_2g099155 | 33.908 | 174 | 77 | 3 | 13 | 153 | 37 | 205 | 1.61e-21 | 93.6 |
| MS.gene88956.t1 | MTR_2g086200 | 82.000 | 50 | 9 | 0 | 396 | 445 | 185 | 234 | 2.09e-19 | 87.4 |
| MS.gene88956.t1 | MTR_4g066310 | 43.103 | 116 | 57 | 4 | 177 | 290 | 69 | 177 | 2.14e-18 | 83.6 |
| MS.gene88956.t1 | MTR_3g028430 | 62.264 | 53 | 11 | 1 | 392 | 444 | 15 | 58 | 1.78e-14 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 67 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATCTCACTGACATTTA+TGG | 0.125437 | 1.4:-36691 | None:intergenic |
| GTTCAATTTGTTTGTTTGTT+TGG | 0.203339 | 1.4:-36866 | None:intergenic |
| TTCAATTTGTTTGTTTGTTT+GGG | 0.210254 | 1.4:-36865 | None:intergenic |
| AAGGCATATCTTGCTTCTTT+TGG | 0.255862 | 1.4:+35734 | MS.gene88956:CDS |
| CATTGATGATGACATCTATT+TGG | 0.256445 | 1.4:+35503 | MS.gene88956:CDS |
| TATGGAGACACTCAAGAATA+TGG | 0.260100 | 1.4:+36827 | MS.gene88956:CDS |
| TTACTTGGCACCGTTTCTTA+TGG | 0.263856 | 1.4:+37392 | MS.gene88956:CDS |
| GTTCGTATGTAGGATTTAAC+TGG | 0.316883 | 1.4:-37342 | None:intergenic |
| TGAAAGAGAAGCAATATCTA+AGG | 0.319092 | 1.4:+37009 | MS.gene88956:CDS |
| TATCAACATTGTCTTTGATT+AGG | 0.340675 | 1.4:-36276 | None:intergenic |
| ATCCTGGAATATCCTTGAAT+TGG | 0.345186 | 1.4:+34541 | MS.gene88956:CDS |
| AAGAAAATCACAAGGACAAT+TGG | 0.350541 | 1.4:+36946 | MS.gene88956:CDS |
| ACAAACAAATCAAATGTGTT+TGG | 0.350566 | 1.4:+37264 | MS.gene88956:CDS |
| GATCAGCAGCACCTTGTTCC+TGG | 0.353942 | 1.4:-35464 | None:intergenic |
| TATCCACAATCAATTGTGTT+AGG | 0.357921 | 1.4:-37885 | None:intergenic |
| CGCAAGCTCGGAAGGTGACT+TGG | 0.378300 | 1.4:-34508 | None:intergenic |
| CTACCTTTGCATAGAGTGTT+GGG | 0.378522 | 1.4:-35238 | None:intergenic |
| AGGTACCACAGGTTCGTTCT+TGG | 0.391410 | 1.4:+35682 | MS.gene88956:CDS |
| GTCCAATTCAAGGATATTCC+AGG | 0.401986 | 1.4:-34543 | None:intergenic |
| GCTACCTTTGCATAGAGTGT+TGG | 0.405827 | 1.4:-35239 | None:intergenic |
| ACAACCAATGTATTATCCTT+TGG | 0.410346 | 1.4:-37524 | None:intergenic |
| AATTTGTTTGTTTGTTTGGG+AGG | 0.440214 | 1.4:-36862 | None:intergenic |
| GCAAAGGTAGCAGCGAAGAT+AGG | 0.447979 | 1.4:+35251 | MS.gene88956:CDS |
| CTGCTAATATTACTACCTCT+TGG | 0.458064 | 1.4:+37940 | MS.gene88956:CDS |
| ATGGAGACACTCAAGAATAT+GGG | 0.460318 | 1.4:+36828 | MS.gene88956:CDS |
| TGGTACTTTGAATTTACTCC+AGG | 0.460563 | 1.4:+35754 | MS.gene88956:CDS |
| GTTCTTGGAGATAAACAAAC+AGG | 0.472710 | 1.4:+35697 | MS.gene88956:CDS |
| GGTTCGTTGGCTTCGTCCTA+AGG | 0.473165 | 1.4:+37731 | MS.gene88956:CDS |
| GTATGCTTTGCGAAATGATT+GGG | 0.478048 | 1.4:+38987 | MS.gene88956:CDS |
| TTTCTGAACATTGTCAATAA+CGG | 0.495554 | 1.4:-36970 | None:intergenic |
| TTTACGTGTATAGAGGGCAT+TGG | 0.497041 | 1.4:+37483 | MS.gene88956:intron |
| TGTATGCTTTGCGAAATGAT+TGG | 0.509036 | 1.4:+38986 | MS.gene88956:CDS |
| GATATGCCTTGATTAAATCC+AGG | 0.515940 | 1.4:-35721 | None:intergenic |
| CTTGCGTTGAAGCTTAATCC+TGG | 0.518653 | 1.4:+34525 | MS.gene88956:CDS |
| ACGCAACTTAGTTCGTATGT+AGG | 0.519497 | 1.4:-37352 | None:intergenic |
| GTCATCATCAATGTCCAACT+TGG | 0.520409 | 1.4:-35493 | None:intergenic |
| GGAGATAAACAAACAGGCCC+TGG | 0.520667 | 1.4:+35703 | MS.gene88956:CDS |
| GTTGTGTTAGGAAGCGCAAA+AGG | 0.533308 | 1.4:+36906 | MS.gene88956:CDS |
| TATTACTACCTCTTGGATGA+AGG | 0.535487 | 1.4:+37947 | MS.gene88956:CDS |
| GTAGCAATTGGAGGTACCAC+AGG | 0.536416 | 1.4:+35671 | MS.gene88956:intron |
| AGCTTCAACGCAAGCTCGGA+AGG | 0.537948 | 1.4:-34516 | None:intergenic |
| GCTCGGAAGGTGACTTGGGA+GGG | 0.542391 | 1.4:-34503 | None:intergenic |
| ATTAATCGTCATTTGTCCAA+AGG | 0.543300 | 1.4:+37508 | MS.gene88956:CDS |
| TATACTTACTCCATAAGAAA+CGG | 0.550414 | 1.4:-37402 | None:intergenic |
| CAACCTAACACAATTGATTG+TGG | 0.553222 | 1.4:+37882 | MS.gene88956:CDS |
| AGATCTTGACACAACAATGA+AGG | 0.553286 | 1.4:+37565 | MS.gene88956:CDS |
| GATGATGACATCTATTTGGA+AGG | 0.554196 | 1.4:+35507 | MS.gene88956:CDS |
| ACAGGCCCTGGATTTAATCA+AGG | 0.556150 | 1.4:+35715 | MS.gene88956:CDS |
| GAGGTTCATCAATTAGCAAA+CGG | 0.557640 | 1.4:+37696 | MS.gene88956:CDS |
| GCAAGCTCGGAAGGTGACTT+GGG | 0.558966 | 1.4:-34507 | None:intergenic |
| TATGAACAAAGTGTGTTACT+TGG | 0.580249 | 1.4:+37377 | MS.gene88956:CDS |
| TTGTCCAAAGGATAATACAT+TGG | 0.585455 | 1.4:+37520 | MS.gene88956:CDS |
| AGCTCGGAAGGTGACTTGGG+AGG | 0.586238 | 1.4:-34504 | None:intergenic |
| AACTGGTTCTGTATTCATTG+CGG | 0.587743 | 1.4:-37325 | None:intergenic |
| AGTAGAGTTCGAACAACAGA+TGG | 0.590629 | 1.4:+36773 | MS.gene88956:CDS |
| ATATGCCTTGATTAAATCCA+GGG | 0.592641 | 1.4:-35720 | None:intergenic |
| TGTTTGTTTCAATACAAAGA+CGG | 0.593801 | 1.4:-37248 | None:intergenic |
| ATTAAGCTTCAACGCAAGCT+CGG | 0.597089 | 1.4:-34520 | None:intergenic |
| ATGTAGCACTACGAGTCAAG+TGG | 0.602557 | 1.4:+35291 | MS.gene88956:CDS |
| CAAGTGTTGGTATGGAGCAG+AGG | 0.603332 | 1.4:+34478 | None:intergenic |
| TGCTGATCTTGCAACCAAGT+TGG | 0.631418 | 1.4:+35479 | MS.gene88956:CDS |
| TGGCCCAACACTCTATGCAA+AGG | 0.637467 | 1.4:+35235 | MS.gene88956:CDS |
| GATCTTTGTTAAATGAACAG+AGG | 0.654416 | 1.4:-37547 | None:intergenic |
| ATGGTATACCTTCATCCAAG+AGG | 0.683941 | 1.4:-37955 | None:intergenic |
| TTGCATCAACTGATGCGCTG+TGG | 0.684847 | 1.4:-36796 | None:intergenic |
| TGCAGCACAAGAAAATCACA+AGG | 0.701471 | 1.4:+36938 | MS.gene88956:CDS |
| TATCTCCAAGAACGAACCTG+TGG | 0.712423 | 1.4:-35687 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | chr1.4:37791-37810 | MS.gene88956:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr1.4:37790-37809 | MS.gene88956:intron | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr1.4:37809-37790 | None:intergenic | 0.0% |
| !! | AAATAAGTAAAATAACAATA+AGG | - | chr1.4:38907-38926 | None:intergenic | 10.0% |
| !! | TAAAAATTAAATTCATTTGT+AGG | + | chr1.4:37851-37870 | MS.gene88956:intron | 10.0% |
| !!! | GTAAATTCTTATTTTTAAAA+TGG | - | chr1.4:35377-35396 | None:intergenic | 10.0% |
| !! | AAAAAACAAACAAAGAAATA+AGG | + | chr1.4:38427-38446 | MS.gene88956:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr1.4:36038-36057 | MS.gene88956:intron | 15.0% |
| !! | AAATTTGTAAACTAAATTGT+GGG | + | chr1.4:38725-38744 | MS.gene88956:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr1.4:36039-36058 | MS.gene88956:intron | 15.0% |
| !! | AATTAAACAACATTAGATTT+AGG | - | chr1.4:36114-36133 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | - | chr1.4:35817-35836 | None:intergenic | 15.0% |
| !! | ATTAAACAACATTAGATTTA+GGG | - | chr1.4:36113-36132 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr1.4:35948-35967 | MS.gene88956:intron | 15.0% |
| !! | TTTAATTAATGTTCTATTAC+TGG | + | chr1.4:36127-36146 | MS.gene88956:intron | 15.0% |
| !!! | ATTGTTAATCTTTTATTGAT+TGG | - | chr1.4:35035-35054 | None:intergenic | 15.0% |
| !!! | ATTTAAAACTCAATTTTGTT+GGG | - | chr1.4:37299-37318 | None:intergenic | 15.0% |
| !!! | TAAAAATATTGACTAAATAG+AGG | - | chr1.4:38088-38107 | None:intergenic | 15.0% |
| !!! | TATATATTTTTGTTGTGTAT+GGG | + | chr1.4:35418-35437 | MS.gene88956:intron | 15.0% |
| !!! | TATTGATTTCATATTTATTC+AGG | + | chr1.4:37217-37236 | MS.gene88956:intron | 15.0% |
| !!! | TTATATATTTTTGTTGTGTA+TGG | + | chr1.4:35417-35436 | MS.gene88956:intron | 15.0% |
| !! | AAAATGTGTTAAAGACTTAT+TGG | + | chr1.4:37079-37098 | MS.gene88956:intron | 20.0% |
| !! | ACAAAAAACCAAACAATATT+TGG | - | chr1.4:38370-38389 | None:intergenic | 20.0% |
| !! | ATTAAGAAATTTATGACTTC+CGG | - | chr1.4:37053-37072 | None:intergenic | 20.0% |
| !! | CAACAAAAATATATAAACGA+TGG | - | chr1.4:35413-35432 | None:intergenic | 20.0% |
| !! | CTCAATAGATAGATATAAAA+TGG | + | chr1.4:38533-38552 | MS.gene88956:intron | 20.0% |
| !! | GAAATTTGTAAACTAAATTG+TGG | + | chr1.4:38724-38743 | MS.gene88956:intron | 20.0% |
| !! | TATGTCTATCTATCTTAATT+TGG | - | chr1.4:38883-38902 | None:intergenic | 20.0% |
| !!! | AAAGGACATAAAAAAAGTAT+AGG | - | chr1.4:36212-36231 | None:intergenic | 20.0% |
| !!! | AAATGATTTAAAGCTATGAA+AGG | - | chr1.4:35539-35558 | None:intergenic | 20.0% |
| !!! | AATAAGTCTTTAACACATTT+TGG | - | chr1.4:37080-37099 | None:intergenic | 20.0% |
| !!! | ATAATTATTTGAGATGTTGA+TGG | + | chr1.4:38224-38243 | MS.gene88956:intron | 20.0% |
| !!! | GATAATAACATCAATCTTTT+CGG | + | chr1.4:36253-36272 | MS.gene88956:CDS | 20.0% |
| !!! | GATTTAAAACTCAATTTTGT+TGG | - | chr1.4:37300-37319 | None:intergenic | 20.0% |
| !!! | TTCAATTTGTTTGTTTGTTT+GGG | - | chr1.4:36868-36887 | None:intergenic | 20.0% |
| !!! | TTTTATGATCCAATACAAAT+AGG | + | chr1.4:34743-34762 | MS.gene88956:intron | 20.0% |
| ! | AAACATAATGCAAAGTTCAA+TGG | - | chr1.4:35648-35667 | None:intergenic | 25.0% |
| ! | AACCTACAAACAAAGAAAAT+TGG | - | chr1.4:35203-35222 | None:intergenic | 25.0% |
| ! | AATATGGACCCTAAAAATAA+GGG | + | chr1.4:38020-38039 | MS.gene88956:intron | 25.0% |
| ! | ACAAACAAATCAAATGTGTT+TGG | + | chr1.4:37264-37283 | MS.gene88956:CDS | 25.0% |
| ! | ACTATTCTATTCTACAAGTT+TGG | + | chr1.4:37120-37139 | MS.gene88956:intron | 25.0% |
| ! | AGATTAACAATTGATGAGTT+TGG | + | chr1.4:35044-35063 | MS.gene88956:intron | 25.0% |
| ! | AGCAAACGGTAATAAAAAAA+AGG | + | chr1.4:37710-37729 | MS.gene88956:CDS | 25.0% |
| ! | AGTCTTAAATCATCAATCAA+TGG | - | chr1.4:36469-36488 | None:intergenic | 25.0% |
| ! | ATATATATGGTGCAAACATA+TGG | - | chr1.4:37977-37996 | None:intergenic | 25.0% |
| ! | ATGAGATTTATCTCTTGTAT+TGG | + | chr1.4:35572-35591 | MS.gene88956:intron | 25.0% |
| ! | ATTAAATTCATTTGTAGGCA+AGG | + | chr1.4:37856-37875 | MS.gene88956:intron | 25.0% |
| ! | CTAAGGTTAAAATTAGAACA+TGG | + | chr1.4:37026-37045 | MS.gene88956:intron | 25.0% |
| ! | GTAATAAAAAAAAGGTTCGT+TGG | + | chr1.4:37718-37737 | MS.gene88956:CDS | 25.0% |
| ! | GTTGATGCAAAAATCATTTA+TGG | + | chr1.4:36809-36828 | MS.gene88956:CDS | 25.0% |
| ! | TAAGGTAACCAAATATTGTT+TGG | + | chr1.4:38359-38378 | MS.gene88956:intron | 25.0% |
| ! | TAATATGGACCCTAAAAATA+AGG | + | chr1.4:38019-38038 | MS.gene88956:intron | 25.0% |
| ! | TATACTTACTCCATAAGAAA+CGG | - | chr1.4:37405-37424 | None:intergenic | 25.0% |
| ! | TATCAACATTGTCTTTGATT+AGG | - | chr1.4:36279-36298 | None:intergenic | 25.0% |
| ! | TGTTTCAGAAAAATTAACCT+TGG | - | chr1.4:38457-38476 | None:intergenic | 25.0% |
| ! | TGTTTGTTTCAATACAAAGA+CGG | - | chr1.4:37251-37270 | None:intergenic | 25.0% |
| ! | TTATATCTATCTATTGAGCT+TGG | - | chr1.4:38531-38550 | None:intergenic | 25.0% |
| ! | TTATTAACGAAAGGTAACAA+AGG | + | chr1.4:35130-35149 | MS.gene88956:intron | 25.0% |
| ! | TTTCTGAACATTGTCAATAA+CGG | - | chr1.4:36973-36992 | None:intergenic | 25.0% |
| !! | ATCAAATGTGTTTGGATTTT+TGG | + | chr1.4:37272-37291 | MS.gene88956:CDS | 25.0% |
| !! | ATTATGTTTTTCGTAGCAAT+TGG | + | chr1.4:35659-35678 | MS.gene88956:intron | 25.0% |
| !! | CGTTTTTCATTATTAACGAA+AGG | + | chr1.4:35121-35140 | MS.gene88956:intron | 25.0% |
| !! | GTTCAATTTGTTTGTTTGTT+TGG | - | chr1.4:36869-36888 | None:intergenic | 25.0% |
| !! | TAATCTATTTTACAAACCGT+AGG | + | chr1.4:38927-38946 | MS.gene88956:intron | 25.0% |
| !! | TGTTATTTATGTTGTTCTTG+TGG | + | chr1.4:38638-38657 | MS.gene88956:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr1.4:35977-35996 | MS.gene88956:intron | 25.0% |
| !!! | ATAAACATCTATGTTGTTTC+CGG | - | chr1.4:36440-36459 | None:intergenic | 25.0% |
| !!! | GTTCTATGTTTTAGTGTTAT+AGG | - | chr1.4:37643-37662 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr1.4:35976-35995 | MS.gene88956:intron | 25.0% |
| !!! | TATTTCTTTGTTGCTTTCTT+AGG | + | chr1.4:35342-35361 | MS.gene88956:intron | 25.0% |
| !!! | TATTTTTAGGGTCCATATTA+GGG | - | chr1.4:38019-38038 | None:intergenic | 25.0% |
| !!! | TTATTTTTAGGGTCCATATT+AGG | - | chr1.4:38020-38039 | None:intergenic | 25.0% |
| !!! | TTCCAATTTTCTTTGTTTGT+AGG | + | chr1.4:35198-35217 | MS.gene88956:intron | 25.0% |
| AACAATTGATGAGTTTGGAA+GGG | + | chr1.4:35049-35068 | MS.gene88956:intron | 30.0% | |
| AAGAAAATCACAAGGACAAT+TGG | + | chr1.4:36946-36965 | MS.gene88956:CDS | 30.0% | |
| ACAACCAATGTATTATCCTT+TGG | - | chr1.4:37527-37546 | None:intergenic | 30.0% | |
| ACCCTAATTCACCATTATAA+AGG | - | chr1.4:34814-34833 | None:intergenic | 30.0% | |
| ACTTGCAGCAAAAATTAAAG+CGG | + | chr1.4:36743-36762 | MS.gene88956:CDS | 30.0% | |
| AGCCTTTATAATGGTGAATT+AGG | + | chr1.4:34809-34828 | MS.gene88956:intron | 30.0% | |
| ATAAAACAGTTGTCCAAGTT+AGG | - | chr1.4:34853-34872 | None:intergenic | 30.0% | |
| ATATGCCTTGATTAAATCCA+GGG | - | chr1.4:35723-35742 | None:intergenic | 30.0% | |
| ATCTTCAACTTACATCAGTT+AGG | - | chr1.4:38584-38603 | None:intergenic | 30.0% | |
| ATTAATCGTCATTTGTCCAA+AGG | + | chr1.4:37508-37527 | MS.gene88956:CDS | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | - | chr1.4:35914-35933 | None:intergenic | 30.0% | |
| CCACTCTAGTTAAAAAAGAA+TGG | - | chr1.4:38330-38349 | None:intergenic | 30.0% | |
| CTATAAGCAATTACTTTGGA+AGG | + | chr1.4:36649-36668 | MS.gene88956:intron | 30.0% | |
| GAATTCAATTTACCCATTCT+TGG | + | chr1.4:36171-36190 | MS.gene88956:intron | 30.0% | |
| GATCTTTGTTAAATGAACAG+AGG | - | chr1.4:37550-37569 | None:intergenic | 30.0% | |
| GCAGTCACTCAAATTATTAA+TGG | - | chr1.4:35000-35019 | None:intergenic | 30.0% | |
| GCCTTTATAATGGTGAATTA+GGG | + | chr1.4:34810-34829 | MS.gene88956:intron | 30.0% | |
| GCTACTATAAGCAATTACTT+TGG | + | chr1.4:36645-36664 | MS.gene88956:intron | 30.0% | |
| GTTAAAATTAGAACATGGTC+CGG | + | chr1.4:37031-37050 | MS.gene88956:intron | 30.0% | |
| GTTGTATCATTGAATACCTA+CGG | - | chr1.4:38946-38965 | None:intergenic | 30.0% | |
| TAAAACAGTTGTCCAAGTTA+GGG | - | chr1.4:34852-34871 | None:intergenic | 30.0% | |
| TAACAATTGATGAGTTTGGA+AGG | + | chr1.4:35048-35067 | MS.gene88956:intron | 30.0% | |
| TACAAATGACCTACTACAAT+CGG | - | chr1.4:38754-38773 | None:intergenic | 30.0% | |
| TATCCACAATCAATTGTGTT+AGG | - | chr1.4:37888-37907 | None:intergenic | 30.0% | |
| TATTAATCCAATTGCTAGAG+AGG | + | chr1.4:34672-34691 | MS.gene88956:intron | 30.0% | |
| TCTGAAAAAGTTGTTGTGTT+AGG | + | chr1.4:36894-36913 | MS.gene88956:CDS | 30.0% | |
| TGAAAGAGAAGCAATATCTA+AGG | + | chr1.4:37009-37028 | MS.gene88956:CDS | 30.0% | |
| TGAAGTAGTGAAGAACATAT+AGG | - | chr1.4:38155-38174 | None:intergenic | 30.0% | |
| TGTGTTAAAGACTTATTGGT+TGG | + | chr1.4:37083-37102 | MS.gene88956:intron | 30.0% | |
| TGTTTCTCTGATACACAAAA+CGG | + | chr1.4:38387-38406 | MS.gene88956:intron | 30.0% | |
| TTCAATCTCACTGACATTTA+TGG | - | chr1.4:36694-36713 | None:intergenic | 30.0% | |
| TTGTAGTAGGTCATTTGTAT+AGG | + | chr1.4:38755-38774 | MS.gene88956:intron | 30.0% | |
| TTGTCCAAAGGATAATACAT+TGG | + | chr1.4:37520-37539 | MS.gene88956:CDS | 30.0% | |
| ! | AAAAGTATAGGTCAGCATTA+TGG | - | chr1.4:36200-36219 | None:intergenic | 30.0% |
| ! | AATTTGTTTGTTTGTTTGGG+AGG | - | chr1.4:36865-36884 | None:intergenic | 30.0% |
| ! | ATTAATGGTTGTTCTGAACA+TGG | - | chr1.4:34985-35004 | None:intergenic | 30.0% |
| ! | CAGTAGTAGGTAATTTGTAA+AGG | - | chr1.4:38058-38077 | None:intergenic | 30.0% |
| ! | CTAGAGTGGTATTGAAATTA+AGG | + | chr1.4:38341-38360 | MS.gene88956:intron | 30.0% |
| ! | TAACTTGGACAACTGTTTTA+TGG | + | chr1.4:34852-34871 | MS.gene88956:intron | 30.0% |
| ! | TATGAACAAAGTGTGTTACT+TGG | + | chr1.4:37377-37396 | MS.gene88956:CDS | 30.0% |
| ! | TGATGATTTAAGACTGTTGT+GGG | + | chr1.4:36474-36493 | MS.gene88956:intron | 30.0% |
| ! | TGTTCTTTTACGTGTATAGA+GGG | + | chr1.4:37477-37496 | MS.gene88956:intron | 30.0% |
| ! | TTCTTTTTCTGTCCAATTCA+AGG | - | chr1.4:34556-34575 | None:intergenic | 30.0% |
| ! | TTGATGATTTAAGACTGTTG+TGG | + | chr1.4:36473-36492 | MS.gene88956:intron | 30.0% |
| ! | TTGTTCTTTTACGTGTATAG+AGG | + | chr1.4:37476-37495 | MS.gene88956:intron | 30.0% |
| !! | CATTGATGATGACATCTATT+TGG | + | chr1.4:35503-35522 | MS.gene88956:CDS | 30.0% |
| !! | CTAATGGTTAGCCTTTATAA+TGG | + | chr1.4:34800-34819 | MS.gene88956:intron | 30.0% |
| !! | GATGTTTAAGAACTTTTTCC+AGG | + | chr1.4:35446-35465 | MS.gene88956:intron | 30.0% |
| !! | TAAACATCTATGTTGTTTCC+GGG | - | chr1.4:36439-36458 | None:intergenic | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr1.4:36070-36089 | MS.gene88956:intron | 30.0% |
| !! | TCAAATTTTGATCAAACAGC+AGG | - | chr1.4:35785-35804 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr1.4:36069-36088 | MS.gene88956:intron | 30.0% |
| !!! | ACAACAACTTTTTCAGAACA+AGG | - | chr1.4:36891-36910 | None:intergenic | 30.0% |
| !!! | ATTTTTAGGGTCCATATTAG+GGG | - | chr1.4:38018-38037 | None:intergenic | 30.0% |
| !!! | ATTTTTTTAACCTAGTGCTC+TGG | + | chr1.4:37674-37693 | MS.gene88956:intron | 30.0% |
| !!! | CCATTCTTTTTTAACTAGAG+TGG | + | chr1.4:38327-38346 | MS.gene88956:intron | 30.0% |
| !!! | GTTTTTAGGTTATGTGTACT+TGG | + | chr1.4:34770-34789 | MS.gene88956:intron | 30.0% |
| AAAACCTCGCCTATTTGTAT+TGG | - | chr1.4:34755-34774 | None:intergenic | 35.0% | |
| AAAATCATTGATCTCGATGC+CGG | - | chr1.4:38301-38320 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | + | chr1.4:36054-36073 | MS.gene88956:intron | 35.0% | |
| AGATCTTGACACAACAATGA+AGG | + | chr1.4:37565-37584 | MS.gene88956:CDS | 35.0% | |
| ATAGTAGCACCTCACATATA+GGG | - | chr1.4:36633-36652 | None:intergenic | 35.0% | |
| ATCCTGGAATATCCTTGAAT+TGG | + | chr1.4:34541-34560 | MS.gene88956:CDS | 35.0% | |
| ATCTTGTCTACACATACCTT+AGG | - | chr1.4:37750-37769 | None:intergenic | 35.0% | |
| ATGACATCTATTTGGAAGGT+TGG | + | chr1.4:35511-35530 | MS.gene88956:intron | 35.0% | |
| ATGGAGACACTCAAGAATAT+GGG | + | chr1.4:36828-36847 | MS.gene88956:CDS | 35.0% | |
| ATTGACTAAATAGAGGCAAC+CGG | - | chr1.4:38081-38100 | None:intergenic | 35.0% | |
| CAACCTAACACAATTGATTG+TGG | + | chr1.4:37882-37901 | MS.gene88956:CDS | 35.0% | |
| CTGCTAATATTACTACCTCT+TGG | + | chr1.4:37940-37959 | MS.gene88956:CDS | 35.0% | |
| GAGGTTCATCAATTAGCAAA+CGG | + | chr1.4:37696-37715 | MS.gene88956:CDS | 35.0% | |
| GATATGCCTTGATTAAATCC+AGG | - | chr1.4:35724-35743 | None:intergenic | 35.0% | |
| GATGATGACATCTATTTGGA+AGG | + | chr1.4:35507-35526 | MS.gene88956:CDS | 35.0% | |
| GTATGCTTTGCGAAATGATT+GGG | + | chr1.4:38987-39006 | MS.gene88956:CDS | 35.0% | |
| GTTCGTATGTAGGATTTAAC+TGG | - | chr1.4:37345-37364 | None:intergenic | 35.0% | |
| GTTCTTGGAGATAAACAAAC+AGG | + | chr1.4:35697-35716 | MS.gene88956:CDS | 35.0% | |
| TAAGGTATGTGTAGACAAGA+TGG | + | chr1.4:37749-37768 | MS.gene88956:intron | 35.0% | |
| TACAAATTACCTACTACTGC+CGG | + | chr1.4:38059-38078 | MS.gene88956:intron | 35.0% | |
| TAGAGCAATTAGGTGCATTT+AGG | + | chr1.4:34892-34911 | MS.gene88956:intron | 35.0% | |
| TAGGTAATCTGTCATCAGTT+GGG | - | chr1.4:38565-38584 | None:intergenic | 35.0% | |
| TAGTATGCACCTCAAAACAA+AGG | - | chr1.4:38793-38812 | None:intergenic | 35.0% | |
| TATAGTAGCACCTCACATAT+AGG | - | chr1.4:36634-36653 | None:intergenic | 35.0% | |
| TATGGAGACACTCAAGAATA+TGG | + | chr1.4:36827-36846 | MS.gene88956:CDS | 35.0% | |
| TATTACTACCTCTTGGATGA+AGG | + | chr1.4:37947-37966 | MS.gene88956:CDS | 35.0% | |
| TCACTAGAACCTCAATAGAT+GGG | + | chr1.4:38189-38208 | MS.gene88956:intron | 35.0% | |
| TCAGAAAAATTAACCTTGGC+AGG | - | chr1.4:38453-38472 | None:intergenic | 35.0% | |
| TCTATCTATTGAGCTTGGAT+TGG | - | chr1.4:38526-38545 | None:intergenic | 35.0% | |
| TGGTACTTTGAATTTACTCC+AGG | + | chr1.4:35754-35773 | MS.gene88956:CDS | 35.0% | |
| TGTATGCTTTGCGAAATGAT+TGG | + | chr1.4:38986-39005 | MS.gene88956:CDS | 35.0% | |
| TTAAGACTGTTGTGGGATAA+AGG | + | chr1.4:36481-36500 | MS.gene88956:intron | 35.0% | |
| TTAGGTAATCTGTCATCAGT+TGG | - | chr1.4:38566-38585 | None:intergenic | 35.0% | |
| TTAGGTTATGTGTACTTGGA+TGG | + | chr1.4:34774-34793 | MS.gene88956:intron | 35.0% | |
| ! | AAGGCATATCTTGCTTCTTT+TGG | + | chr1.4:35734-35753 | MS.gene88956:CDS | 35.0% |
| ! | ATGTTTTTCGTAGCAATTGG+AGG | + | chr1.4:35662-35681 | MS.gene88956:intron | 35.0% |
| ! | GCATCGAGATCAATGATTTT+GGG | + | chr1.4:38301-38320 | MS.gene88956:intron | 35.0% |
| ! | GGTAATTTGTAAAGGTTCAC+TGG | - | chr1.4:38050-38069 | None:intergenic | 35.0% |
| ! | GTTAAAGACTTATTGGTTGG+CGG | + | chr1.4:37086-37105 | MS.gene88956:intron | 35.0% |
| ! | TACAAATAGGCGAGGTTTTT+AGG | + | chr1.4:34756-34775 | MS.gene88956:intron | 35.0% |
| ! | TATTGAGGTTCTAGTGAGAT+AGG | - | chr1.4:38186-38205 | None:intergenic | 35.0% |
| ! | TGACATTTATGGTTTGCCTT+GGG | - | chr1.4:36683-36702 | None:intergenic | 35.0% |
| ! | TGCTACATCTCGTATTTTCT+TGG | - | chr1.4:35279-35298 | None:intergenic | 35.0% |
| ! | TGTAGGTTTGCATCATTTTC+TGG | + | chr1.4:35215-35234 | MS.gene88956:intron | 35.0% |
| ! | TTAAAGACTTATTGGTTGGC+GGG | + | chr1.4:37087-37106 | MS.gene88956:intron | 35.0% |
| !! | AACTGGTTCTGTATTCATTG+CGG | - | chr1.4:37328-37347 | None:intergenic | 35.0% |
| !! | AAGAACTTTTTCCAGGAACA+AGG | + | chr1.4:35453-35472 | MS.gene88956:CDS | 35.0% |
| !! | TGGATCATAAAAGTGTTTGC+AGG | - | chr1.4:34735-34754 | None:intergenic | 35.0% |
| !!! | ACTGGTAGACCCTTATTTTT+AGG | - | chr1.4:38032-38051 | None:intergenic | 35.0% |
| !!! | CTGGTAGACCCTTATTTTTA+GGG | - | chr1.4:38031-38050 | None:intergenic | 35.0% |
| !!! | TATTGAGCTTGGATTGGTTT+TGG | - | chr1.4:38520-38539 | None:intergenic | 35.0% |
| !!! | TTGTTTTGAGGTGCATACTA+GGG | + | chr1.4:38793-38812 | MS.gene88956:intron | 35.0% |
| !!! | TTTGTTTTGAGGTGCATACT+AGG | + | chr1.4:38792-38811 | MS.gene88956:intron | 35.0% |
| AAGTTGAAGATCTTCAGCCT+TGG | + | chr1.4:38593-38612 | MS.gene88956:intron | 40.0% | |
| AATTGCTCTAATCTGCTCAC+AGG | - | chr1.4:34882-34901 | None:intergenic | 40.0% | |
| ACGCAACTTAGTTCGTATGT+AGG | - | chr1.4:37355-37374 | None:intergenic | 40.0% | |
| ACGCATATTGAAATGTTCGC+CGG | - | chr1.4:36530-36549 | None:intergenic | 40.0% | |
| AGCATTATGGCAACCAAGAA+TGG | - | chr1.4:36187-36206 | None:intergenic | 40.0% | |
| AGTAGAGTTCGAACAACAGA+TGG | + | chr1.4:36773-36792 | MS.gene88956:CDS | 40.0% | |
| ATCAAACAGCAGGATTTACC+TGG | - | chr1.4:35775-35794 | None:intergenic | 40.0% | |
| ATGCTGTCGATGATGATTTC+GGG | + | chr1.4:36403-36422 | MS.gene88956:intron | 40.0% | |
| ATGGTATACCTTCATCCAAG+AGG | - | chr1.4:37958-37977 | None:intergenic | 40.0% | |
| ATTAAGCTTCAACGCAAGCT+CGG | - | chr1.4:34523-34542 | None:intergenic | 40.0% | |
| CACCAGGAAACAAAAAGGAA+AGG | - | chr1.4:36230-36249 | None:intergenic | 40.0% | |
| CCACTCAAATTACCATATGC+CGG | - | chr1.4:36583-36602 | None:intergenic | 40.0% | |
| CGGCATATGGTAATTTGAGT+GGG | + | chr1.4:36581-36600 | MS.gene88956:intron | 40.0% | |
| CTCACTAGAACCTCAATAGA+TGG | + | chr1.4:38188-38207 | MS.gene88956:intron | 40.0% | |
| GATGCTGTCGATGATGATTT+CGG | + | chr1.4:36402-36421 | MS.gene88956:intron | 40.0% | |
| GATGTTCTTGATGCGTATTC+CGG | + | chr1.4:36508-36527 | MS.gene88956:intron | 40.0% | |
| GCATGCTTTATGCCCTTTAA+TGG | - | chr1.4:36611-36630 | None:intergenic | 40.0% | |
| GCATTATGGCAACCAAGAAT+GGG | - | chr1.4:36186-36205 | None:intergenic | 40.0% | |
| GCTTTCTATCCCATCTATTG+AGG | - | chr1.4:38201-38220 | None:intergenic | 40.0% | |
| GGAGATGACAAGGAAACAAT+TGG | + | chr1.4:38614-38633 | MS.gene88956:intron | 40.0% | |
| GGTCATTTGTATAGGTCCAT+CGG | + | chr1.4:38763-38782 | MS.gene88956:intron | 40.0% | |
| GTCATCATCAATGTCCAACT+TGG | - | chr1.4:35496-35515 | None:intergenic | 40.0% | |
| GTCCAATTCAAGGATATTCC+AGG | - | chr1.4:34546-34565 | None:intergenic | 40.0% | |
| GTGAGCAGATTAGAGCAATT+AGG | + | chr1.4:34882-34901 | MS.gene88956:intron | 40.0% | |
| TAAAGCATGCCCTATATGTG+AGG | + | chr1.4:36621-36640 | MS.gene88956:intron | 40.0% | |
| TAATGGAATTGCAGTGCCAT+TGG | - | chr1.4:38277-38296 | None:intergenic | 40.0% | |
| TAGGATACAAGTCCATGTGA+TGG | + | chr1.4:34911-34930 | MS.gene88956:intron | 40.0% | |
| TATATAGGGAGCCCCTAATA+TGG | + | chr1.4:38004-38023 | MS.gene88956:intron | 40.0% | |
| TCAGGGGAATTCATCTATTG+TGG | - | chr1.4:38253-38272 | None:intergenic | 40.0% | |
| TGAGTGGGTACACCATTAAA+GGG | + | chr1.4:36596-36615 | MS.gene88956:intron | 40.0% | |
| TGATCCAATACAAATAGGCG+AGG | + | chr1.4:34748-34767 | MS.gene88956:intron | 40.0% | |
| TGATGTTATTATCCTGCACC+AGG | - | chr1.4:36246-36265 | None:intergenic | 40.0% | |
| TGCAGCACAAGAAAATCACA+AGG | + | chr1.4:36938-36957 | MS.gene88956:CDS | 40.0% | |
| TGTACTTGGATGGAGACTAA+TGG | + | chr1.4:34784-34803 | MS.gene88956:intron | 40.0% | |
| TTACTTGGCACCGTTTCTTA+TGG | + | chr1.4:37392-37411 | MS.gene88956:CDS | 40.0% | |
| TTGAGTGGGTACACCATTAA+AGG | + | chr1.4:36595-36614 | MS.gene88956:intron | 40.0% | |
| TTGTTTCCTTGTCATCTCCA+AGG | - | chr1.4:38613-38632 | None:intergenic | 40.0% | |
| ! | CTACCTTTGCATAGAGTGTT+GGG | - | chr1.4:35241-35260 | None:intergenic | 40.0% |
| ! | CTGACATTTATGGTTTGCCT+TGG | - | chr1.4:36684-36703 | None:intergenic | 40.0% |
| ! | TAAAGACTTATTGGTTGGCG+GGG | + | chr1.4:37088-37107 | MS.gene88956:intron | 40.0% |
| ! | TTTACGTGTATAGAGGGCAT+TGG | + | chr1.4:37483-37502 | MS.gene88956:intron | 40.0% |
| ! | TTTTTAACCTAGTGCTCTGG+AGG | + | chr1.4:37677-37696 | MS.gene88956:intron | 40.0% |
| !! | GGCATCGAGATCAATGATTT+TGG | + | chr1.4:38300-38319 | MS.gene88956:intron | 40.0% |
| !! | GTCCTTTCCTTTTTGTTTCC+TGG | + | chr1.4:36225-36244 | MS.gene88956:intron | 40.0% |
| !! | GTTGATGGTGCAAAACAACA+TGG | - | chr1.4:36554-36573 | None:intergenic | 40.0% |
| !!! | TGTTTTGAGGTGCATACTAG+GGG | + | chr1.4:38794-38813 | MS.gene88956:intron | 40.0% |
| ACAGGCCCTGGATTTAATCA+AGG | + | chr1.4:35715-35734 | MS.gene88956:CDS | 45.0% | |
| ATATGCCGGAAAGTCGTTGA+TGG | - | chr1.4:36569-36588 | None:intergenic | 45.0% | |
| ATCAACGACTTTCCGGCATA+TGG | + | chr1.4:36568-36587 | MS.gene88956:intron | 45.0% | |
| ATGTAGCACTACGAGTCAAG+TGG | + | chr1.4:35291-35310 | MS.gene88956:CDS | 45.0% | |
| CAAAGAAATAAGGCCTGCCA+AGG | + | chr1.4:38437-38456 | MS.gene88956:intron | 45.0% | |
| CAGTTGTCCAAGTTAGGGTT+TGG | - | chr1.4:34847-34866 | None:intergenic | 45.0% | |
| CATTTGTATAGGTCCATCGG+TGG | + | chr1.4:38766-38785 | MS.gene88956:intron | 45.0% | |
| CCGGCATATGGTAATTTGAG+TGG | + | chr1.4:36580-36599 | MS.gene88956:intron | 45.0% | |
| CTAGCATAAGGACCATCACA+TGG | - | chr1.4:34926-34945 | None:intergenic | 45.0% | |
| CTTGCGTTGAAGCTTAATCC+TGG | + | chr1.4:34525-34544 | MS.gene88956:CDS | 45.0% | |
| GATGAATTCCCCTGATCCAA+TGG | + | chr1.4:38258-38277 | MS.gene88956:intron | 45.0% | |
| GATGAGTTTGGAAGGGTTAG+AGG | + | chr1.4:35056-35075 | MS.gene88956:intron | 45.0% | |
| GATTCCTCCAAACCCTAACT+TGG | + | chr1.4:34837-34856 | MS.gene88956:intron | 45.0% | |
| GCTACCTTTGCATAGAGTGT+TGG | - | chr1.4:35242-35261 | None:intergenic | 45.0% | |
| TATCTCCAAGAACGAACCTG+TGG | - | chr1.4:35690-35709 | None:intergenic | 45.0% | |
| TCAAAACAAAGGTCCACCGA+TGG | - | chr1.4:38782-38801 | None:intergenic | 45.0% | |
| TCCTGCACCAGGAAACAAAA+AGG | - | chr1.4:36235-36254 | None:intergenic | 45.0% | |
| TGATGCGTCAGGAAAGAAGA+AGG | + | chr1.4:38665-38684 | MS.gene88956:intron | 45.0% | |
| TGCTGATCTTGCAACCAAGT+TGG | + | chr1.4:35479-35498 | MS.gene88956:CDS | 45.0% | |
| TTACGCTTCATGCACAACGA+AGG | - | chr1.4:36376-36395 | None:intergenic | 45.0% | |
| TTGCACCATCAACGACTTTC+CGG | + | chr1.4:36561-36580 | MS.gene88956:intron | 45.0% | |
| TTGTCCAAGTTAGGGTTTGG+AGG | - | chr1.4:34844-34863 | None:intergenic | 45.0% | |
| ! | AATTGCAGTGCCATTGGATC+AGG | - | chr1.4:38271-38290 | None:intergenic | 45.0% |
| ! | ATTGCAGTGCCATTGGATCA+GGG | - | chr1.4:38270-38289 | None:intergenic | 45.0% |
| ! | GTTGTGTTAGGAAGCGCAAA+AGG | + | chr1.4:36906-36925 | MS.gene88956:CDS | 45.0% |
| ! | TGGTTGTTCTGAACATGGCA+AGG | - | chr1.4:34980-34999 | None:intergenic | 45.0% |
| !! | ATGTTGTTTCCGGGTTGGTA+TGG | - | chr1.4:36430-36449 | None:intergenic | 45.0% |
| !! | CATCTATGTTGTTTCCGGGT+TGG | - | chr1.4:36435-36454 | None:intergenic | 45.0% |
| !! | TCCTTTTTGTTTCCTGGTGC+AGG | + | chr1.4:36231-36250 | MS.gene88956:intron | 45.0% |
| !! | TGTTGTTTCCGGGTTGGTAT+GGG | - | chr1.4:36429-36448 | None:intergenic | 45.0% |
| !!! | ATCGGTGGACCTTTGTTTTG+AGG | + | chr1.4:38781-38800 | MS.gene88956:intron | 45.0% |
| !! | AATACTTATATAATTTAATA+TGG | - | chr1.4:35624-35643 | None:intergenic | 5.0% |
| !!! | ATAAGTAAATTTTTTTTTAT+AGG | + | chr1.4:36009-36028 | MS.gene88956:intron | 5.0% |
| !!! | TAAGTAAATTTTTTTTTATA+GGG | + | chr1.4:36010-36029 | MS.gene88956:intron | 5.0% |
| AGGTACCACAGGTTCGTTCT+TGG | + | chr1.4:35682-35701 | MS.gene88956:CDS | 50.0% | |
| CCTCAATGGGTCCTCTCAAT+CGG | - | chr1.4:34952-34971 | None:intergenic | 50.0% | |
| CTCAATCGGTGGCTAGCATA+AGG | - | chr1.4:34938-34957 | None:intergenic | 50.0% | |
| CTCATCACCACTCACTCACA+AGG | - | chr1.4:34703-34722 | None:intergenic | 50.0% | |
| CTTCAGCCTTGGAGATGACA+AGG | + | chr1.4:38604-38623 | MS.gene88956:intron | 50.0% | |
| GCAAAGGTAGCAGCGAAGAT+AGG | + | chr1.4:35251-35270 | MS.gene88956:CDS | 50.0% | |
| GGAGATAAACAAACAGGCCC+TGG | + | chr1.4:35703-35722 | MS.gene88956:CDS | 50.0% | |
| GGCACTGCAATTCCATTAGC+CGG | + | chr1.4:38279-38298 | MS.gene88956:intron | 50.0% | |
| TGAGAGGACCCATTGAGGAT+GGG | + | chr1.4:34954-34973 | MS.gene88956:intron | 50.0% | |
| TGGCCCAACACTCTATGCAA+AGG | + | chr1.4:35235-35254 | MS.gene88956:CDS | 50.0% | |
| TGTGGGCAACCGATTGTAGT+AGG | + | chr1.4:38742-38761 | MS.gene88956:intron | 50.0% | |
| TTGAGAGGACCCATTGAGGA+TGG | + | chr1.4:34953-34972 | MS.gene88956:intron | 50.0% | |
| TTGCATCAACTGATGCGCTG+TGG | - | chr1.4:36799-36818 | None:intergenic | 50.0% | |
| TTGGAAGGTCTTCATGCCCA+AGG | + | chr1.4:36664-36683 | MS.gene88956:intron | 50.0% | |
| ! | CTTGTGAGTGAGTGGTGATG+AGG | + | chr1.4:34701-34720 | MS.gene88956:intron | 50.0% |
| ! | CTTGTGGATGATGATGCGTC+AGG | + | chr1.4:38654-38673 | MS.gene88956:intron | 50.0% |
| ! | TATGCTAGCCACCGATTGAG+AGG | + | chr1.4:34938-34957 | MS.gene88956:intron | 50.0% |
| ! | TGATGAACCTCCAGAGCACT+AGG | - | chr1.4:37687-37706 | None:intergenic | 50.0% |
| ! | TTGATCTCGATGCCGGCTAA+TGG | - | chr1.4:38294-38313 | None:intergenic | 50.0% |
| ! | TTGCAGTGCCATTGGATCAG+GGG | - | chr1.4:38269-38288 | None:intergenic | 50.0% |
| !! | GTAGCAATTGGAGGTACCAC+AGG | + | chr1.4:35671-35690 | MS.gene88956:intron | 50.0% |
| AGCTTCAACGCAAGCTCGGA+AGG | - | chr1.4:34519-34538 | None:intergenic | 55.0% | |
| ATGGCAAGGCCCATCCTCAA+TGG | - | chr1.4:34966-34985 | None:intergenic | 55.0% | |
| ATTTCGGGCCCATACCAACC+CGG | + | chr1.4:36418-36437 | MS.gene88956:intron | 55.0% | |
| CAATGGGTCCTCTCAATCGG+TGG | - | chr1.4:34949-34968 | None:intergenic | 55.0% | |
| CCGATTGAGAGGACCCATTG+AGG | + | chr1.4:34949-34968 | MS.gene88956:intron | 55.0% | |
| GATCAGCAGCACCTTGTTCC+TGG | - | chr1.4:35467-35486 | None:intergenic | 55.0% | |
| GCAAGCTCGGAAGGTGACTT+GGG | - | chr1.4:34510-34529 | None:intergenic | 55.0% | |
| TAGAGGCAACCGGCAGTAGT+AGG | - | chr1.4:38071-38090 | None:intergenic | 55.0% | |
| TGGCAAGGCCCATCCTCAAT+GGG | - | chr1.4:34965-34984 | None:intergenic | 55.0% | |
| ! | ACTTATTGGTTGGCGGGGCT+TGG | + | chr1.4:37093-37112 | MS.gene88956:intron | 55.0% |
| !! | GGTTCGTTGGCTTCGTCCTA+AGG | + | chr1.4:37731-37750 | MS.gene88956:CDS | 55.0% |
| CGCAAGCTCGGAAGGTGACT+TGG | - | chr1.4:34511-34530 | None:intergenic | 60.0% | |
| GGACGCGCCTCTCTAGCAAT+TGG | - | chr1.4:34682-34701 | None:intergenic | 60.0% | |
| ! | AGCTCGGAAGGTGACTTGGG+AGG | - | chr1.4:34507-34526 | None:intergenic | 60.0% |
| ! | GCTCGGAAGGTGACTTGGGA+GGG | - | chr1.4:34506-34525 | None:intergenic | 60.0% |
| GGCGCGTCCTTGTGAGTGAG+TGG | + | chr1.4:34693-34712 | MS.gene88956:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 34489 | 39041 | 34489 | ID=MS.gene88956 |
| chr1.4 | mRNA | 34489 | 39041 | 34489 | ID=MS.gene88956.t1;Parent=MS.gene88956 |
| chr1.4 | exon | 34489 | 34604 | 34489 | ID=MS.gene88956.t1.exon1;Parent=MS.gene88956.t1 |
| chr1.4 | CDS | 34489 | 34604 | 34489 | ID=cds.MS.gene88956.t1;Parent=MS.gene88956.t1 |
| chr1.4 | exon | 35220 | 35319 | 35220 | ID=MS.gene88956.t1.exon2;Parent=MS.gene88956.t1 |
| chr1.4 | CDS | 35220 | 35319 | 35220 | ID=cds.MS.gene88956.t1;Parent=MS.gene88956.t1 |
| chr1.4 | exon | 35447 | 35528 | 35447 | ID=MS.gene88956.t1.exon3;Parent=MS.gene88956.t1 |
| chr1.4 | CDS | 35447 | 35528 | 35447 | ID=cds.MS.gene88956.t1;Parent=MS.gene88956.t1 |
| chr1.4 | exon | 35675 | 35775 | 35675 | ID=MS.gene88956.t1.exon4;Parent=MS.gene88956.t1 |
| chr1.4 | CDS | 35675 | 35775 | 35675 | ID=cds.MS.gene88956.t1;Parent=MS.gene88956.t1 |
| chr1.4 | exon | 36253 | 36311 | 36253 | ID=MS.gene88956.t1.exon5;Parent=MS.gene88956.t1 |
| chr1.4 | CDS | 36253 | 36311 | 36253 | ID=cds.MS.gene88956.t1;Parent=MS.gene88956.t1 |
| chr1.4 | exon | 36686 | 37030 | 36686 | ID=MS.gene88956.t1.exon6;Parent=MS.gene88956.t1 |
| chr1.4 | CDS | 36686 | 37030 | 36686 | ID=cds.MS.gene88956.t1;Parent=MS.gene88956.t1 |
| chr1.4 | exon | 37239 | 37415 | 37239 | ID=MS.gene88956.t1.exon7;Parent=MS.gene88956.t1 |
| chr1.4 | CDS | 37239 | 37415 | 37239 | ID=cds.MS.gene88956.t1;Parent=MS.gene88956.t1 |
| chr1.4 | exon | 37496 | 37600 | 37496 | ID=MS.gene88956.t1.exon8;Parent=MS.gene88956.t1 |
| chr1.4 | CDS | 37496 | 37600 | 37496 | ID=cds.MS.gene88956.t1;Parent=MS.gene88956.t1 |
| chr1.4 | exon | 37689 | 37752 | 37689 | ID=MS.gene88956.t1.exon9;Parent=MS.gene88956.t1 |
| chr1.4 | CDS | 37689 | 37752 | 37689 | ID=cds.MS.gene88956.t1;Parent=MS.gene88956.t1 |
| chr1.4 | exon | 37873 | 37968 | 37873 | ID=MS.gene88956.t1.exon10;Parent=MS.gene88956.t1 |
| chr1.4 | CDS | 37873 | 37968 | 37873 | ID=cds.MS.gene88956.t1;Parent=MS.gene88956.t1 |
| chr1.4 | exon | 38949 | 39041 | 38949 | ID=MS.gene88956.t1.exon11;Parent=MS.gene88956.t1 |
| chr1.4 | CDS | 38949 | 39041 | 38949 | ID=cds.MS.gene88956.t1;Parent=MS.gene88956.t1 |
| Gene Sequence |
| Protein sequence |
