AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89007


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89007.t1 MTR_6g038300 94.700 283 15 0 1 283 26 308 0.0 557
MS.gene89007.t1 MTR_6g038300 82.609 46 8 0 284 329 413 458 9.78e-16 78.2
MS.gene89007.t1 MTR_6g038240 69.759 291 85 3 1 290 26 314 2.53e-147 423
MS.gene89007.t1 MTR_6g038240 48.611 72 32 1 257 328 390 456 2.15e-13 70.9
MS.gene89007.t1 MTR_6g038220 62.898 283 104 1 1 283 26 307 6.03e-133 386
MS.gene89007.t1 MTR_6g038220 65.217 46 16 0 284 329 411 456 3.71e-12 67.4
MS.gene89007.t1 MTR_6g038200 63.732 284 101 2 1 283 26 308 2.58e-131 382
MS.gene89007.t1 MTR_6g038200 65.217 46 16 0 284 329 412 457 3.89e-12 67.0
MS.gene89007.t1 MTR_6g038230 58.033 305 121 4 1 299 26 329 7.99e-122 358
MS.gene89007.t1 MTR_6g038230 68.182 44 14 0 284 327 412 455 8.27e-12 66.2
MS.gene89007.t1 MTR_7g080940 51.056 284 135 3 1 283 26 306 1.62e-96 293
MS.gene89007.t1 MTR_7g080935 50.704 284 136 3 1 283 26 306 1.14e-95 291
MS.gene89007.t1 MTR_7g080900 49.474 285 139 4 1 283 27 308 2.06e-94 288
MS.gene89007.t1 MTR_7g080950 48.239 284 143 4 1 283 21 301 1.07e-87 271
MS.gene89007.t1 MTR_8g088560 41.615 322 173 4 1 320 25 333 7.29e-79 248
MS.gene89007.t1 MTR_5g035580 42.810 306 168 3 1 304 28 328 1.22e-76 242
MS.gene89007.t1 MTR_7g080960 39.481 347 142 8 1 283 27 369 6.32e-76 241
MS.gene89007.t1 MTR_5g035560 41.581 291 165 2 1 291 26 311 1.01e-73 236
MS.gene89007.t1 MTR_8g083290 36.789 299 165 12 2 283 20 311 6.40e-47 165
MS.gene89007.t1 MTR_3g084520 31.889 323 206 7 2 310 22 344 1.79e-40 148
MS.gene89007.t1 MTR_1g107380 30.565 301 184 7 1 283 28 321 5.28e-40 146
MS.gene89007.t1 MTR_4g095008 33.446 296 171 10 1 283 26 308 3.46e-36 137
MS.gene89007.t1 MTR_1g032490 27.797 295 197 5 1 283 25 315 3.91e-33 128
MS.gene89007.t1 MTR_3g084530 31.313 297 185 7 2 283 22 314 4.46e-33 127
MS.gene89007.t1 MTR_8g083280 31.611 329 182 13 2 301 23 337 4.53e-32 125
MS.gene89007.t1 MTR_3g084540 31.058 293 191 6 2 283 22 314 9.09e-32 124
MS.gene89007.t1 MTR_4g094920 32.653 294 174 9 2 283 42 323 2.93e-31 123
MS.gene89007.t1 MTR_3g049970 27.119 295 199 5 1 283 24 314 5.59e-31 122
MS.gene89007.t1 MTR_1g107315 27.458 295 198 5 1 283 23 313 3.69e-30 119
MS.gene89007.t1 MTR_8g064880 27.609 297 197 7 1 283 24 316 5.16e-30 119
MS.gene89007.t1 MTR_1g107375 27.027 296 195 7 1 284 23 309 1.64e-29 117
MS.gene89007.t1 MTR_1g107360 27.181 298 197 7 1 284 24 315 3.06e-29 117
MS.gene89007.t1 MTR_1g107365 26.000 300 193 6 1 283 60 347 1.95e-28 115
MS.gene89007.t1 MTR_1g107350 30.317 221 147 3 66 283 97 313 6.68e-28 113
MS.gene89007.t1 MTR_8g064870 26.014 296 199 7 1 283 26 314 2.15e-27 112
MS.gene89007.t1 MTR_5g016480 28.247 308 200 10 2 293 24 326 2.00e-26 109
MS.gene89007.t1 MTR_1g107285 25.000 296 204 6 1 282 23 314 2.69e-25 105
MS.gene89007.t1 MTR_6g014220 27.273 308 197 10 1 283 25 330 5.60e-25 105
MS.gene89007.t1 MTR_4g094220 27.221 349 223 9 1 320 22 368 5.76e-24 102
MS.gene89007.t1 MTR_2g008210 26.250 320 196 9 2 292 27 335 6.81e-24 102
MS.gene89007.t1 MTR_6g014040 25.723 311 201 8 1 283 25 333 7.17e-24 102
MS.gene89007.t1 MTR_5g464810 27.215 316 185 12 1 283 27 330 1.59e-23 100
MS.gene89007.t1 MTR_5g064240 27.215 316 185 12 1 283 27 330 1.59e-23 100
MS.gene89007.t1 MTR_6g014290 26.384 307 201 8 1 283 25 330 3.79e-23 100
MS.gene89007.t1 MTR_0036s0220 27.070 314 188 11 1 283 27 330 7.51e-23 99.0
MS.gene89007.t1 MTR_7g013180 26.032 315 191 10 1 295 20 312 3.92e-22 96.7
MS.gene89007.t1 MTR_6g014250 27.331 311 193 11 1 283 25 330 4.30e-22 97.1
MS.gene89007.t1 MTR_3g008010 25.733 307 203 8 1 283 25 330 4.68e-22 96.7
MS.gene89007.t1 MTR_7g011470 27.055 292 184 10 12 283 36 318 6.66e-22 96.3
MS.gene89007.t1 MTR_8g059425 24.351 308 206 7 1 283 25 330 7.75e-22 96.3
MS.gene89007.t1 MTR_7g055710 27.832 309 182 11 1 283 26 319 1.14e-21 95.9
MS.gene89007.t1 MTR_8g066610 28.662 314 195 9 2 293 25 331 1.68e-21 95.1
MS.gene89007.t1 MTR_5g464760 25.723 311 198 8 1 283 27 332 2.10e-21 94.7
MS.gene89007.t1 MTR_7g011470 27.397 292 179 10 12 283 36 314 3.63e-21 94.0
MS.gene89007.t1 MTR_3g079480 25.237 317 211 8 1 293 36 350 5.81e-21 93.6
MS.gene89007.t1 MTR_6g013440 25.478 314 197 9 1 283 26 333 8.84e-21 93.2
MS.gene89007.t1 MTR_3g069690 30.345 290 182 9 1 283 23 299 1.22e-20 92.4
MS.gene89007.t1 MTR_6g013900 28.664 307 175 11 11 283 35 331 2.97e-20 91.7
MS.gene89007.t1 MTR_4g485590 30.476 315 160 13 1 293 24 301 3.47e-20 90.9
MS.gene89007.t1 MTR_7g070860 25.776 322 204 12 1 301 22 329 4.17e-20 91.3
MS.gene89007.t1 MTR_6g014020 24.839 310 204 8 1 283 25 332 4.73e-20 90.9
MS.gene89007.t1 MTR_8g077590 29.630 216 122 6 80 283 107 304 4.81e-20 90.9
MS.gene89007.t1 MTR_5g072840 30.332 211 132 5 84 290 108 307 5.25e-20 90.5
MS.gene89007.t1 MTR_3g479470 27.019 322 193 12 2 291 29 340 8.13e-20 90.1
MS.gene89007.t1 MTR_5g072830 29.730 222 138 6 73 290 100 307 9.46e-20 89.7
MS.gene89007.t1 MTR_3g479490 25.786 318 210 9 1 294 21 336 1.39e-19 89.7
MS.gene89007.t1 MTR_7g013220 27.778 306 178 12 1 283 20 305 1.73e-19 89.0
MS.gene89007.t1 MTR_6g013680 25.940 266 174 8 39 283 16 279 2.25e-19 88.2
MS.gene89007.t1 MTR_6g013450 24.116 311 206 7 1 283 25 333 4.29e-19 88.2
MS.gene89007.t1 MTR_0536s0020 25.163 306 187 9 14 301 46 327 5.97e-19 87.8
MS.gene89007.t1 MTR_3g479520 24.214 318 213 8 1 293 30 344 7.25e-19 87.4
MS.gene89007.t1 MTR_6g014186 25.714 315 195 10 1 283 22 329 9.39e-19 87.0
MS.gene89007.t1 MTR_3g031400 27.333 300 194 9 1 294 33 314 1.09e-18 87.0
MS.gene89007.t1 MTR_0288s0020 23.794 311 187 9 1 283 25 313 1.15e-18 86.7
MS.gene89007.t1 MTR_6g014310 25.658 304 189 9 11 283 36 333 1.18e-18 86.7
MS.gene89007.t1 MTR_7g070610 26.769 325 197 14 1 300 28 336 1.31e-18 86.7
MS.gene89007.t1 MTR_6g014050 25.574 305 188 10 11 283 36 333 1.37e-18 86.7
MS.gene89007.t1 MTR_4g485640 26.403 303 190 12 4 293 231 513 1.40e-18 87.0
MS.gene89007.t1 MTR_7g070740 26.471 306 190 12 1 283 26 319 3.22e-18 85.5
MS.gene89007.t1 MTR_5g072810 27.570 214 138 5 84 290 109 312 3.45e-18 85.5
MS.gene89007.t1 MTR_5g072860 25.000 248 150 8 71 305 107 331 3.71e-18 85.5
MS.gene89007.t1 MTR_6g014187 25.484 310 202 9 1 283 25 332 4.76e-18 85.1
MS.gene89007.t1 MTR_7g070660 28.383 303 183 15 1 283 26 314 5.05e-18 85.1
MS.gene89007.t1 MTR_5g072820 29.279 222 139 7 73 290 100 307 6.00e-18 84.7
MS.gene89007.t1 MTR_3g031450 27.393 303 192 10 1 294 33 316 6.28e-18 84.7
MS.gene89007.t1 MTR_6g014170 26.299 308 184 12 1 283 25 314 8.16e-18 84.3
MS.gene89007.t1 MTR_7g013240 26.490 302 175 12 1 283 21 294 1.91e-17 83.2
MS.gene89007.t1 MTR_4g485630 27.500 320 193 13 2 301 25 325 1.94e-17 83.2
MS.gene89007.t1 MTR_4g064987 28.947 304 170 12 1 283 23 301 2.26e-17 82.8
MS.gene89007.t1 MTR_4g485620 27.445 317 172 13 2 283 5 298 2.85e-17 82.8
MS.gene89007.t1 MTR_5g090700 28.431 204 122 6 89 282 117 306 3.59e-17 82.4
MS.gene89007.t1 MTR_3g069710 26.733 303 175 10 1 283 27 302 4.32e-17 82.0
MS.gene89007.t1 MTR_4g064987 29.097 299 170 12 1 283 23 295 5.62e-17 81.6
MS.gene89007.t1 MTR_6g013960 25.868 317 192 13 1 283 25 332 5.68e-17 81.6
MS.gene89007.t1 MTR_7g070870 31.416 226 129 9 74 293 121 326 6.02e-17 81.6
MS.gene89007.t1 MTR_7g070800 26.129 310 200 11 1 292 21 319 6.05e-17 81.6
MS.gene89007.t1 MTR_6g011340 25.581 301 193 9 11 283 35 332 7.37e-17 81.6
MS.gene89007.t1 MTR_6g014150 25.902 305 187 10 11 283 32 329 9.45e-17 81.3
MS.gene89007.t1 MTR_7g070780 24.918 305 196 11 1 283 26 319 9.93e-17 81.3
MS.gene89007.t1 MTR_6g014200 25.249 301 194 9 11 283 32 329 1.38e-16 80.5
MS.gene89007.t1 MTR_7g117170 29.817 218 119 7 80 283 113 310 3.21e-16 79.7
MS.gene89007.t1 MTR_8g044140 29.434 265 151 13 49 293 48 296 3.49e-16 79.3
MS.gene89007.t1 MTR_5g031840 25.284 352 202 14 1 320 20 342 4.76e-16 79.0
MS.gene89007.t1 MTR_5g016660 26.861 309 187 11 1 283 25 320 4.90e-16 79.0
MS.gene89007.t1 MTR_6g013920 25.574 305 187 10 11 283 35 331 5.07e-16 79.0
MS.gene89007.t1 MTR_7g013200 25.926 297 184 9 1 283 20 294 7.50e-16 78.2
MS.gene89007.t1 MTR_8g027885 24.415 299 186 11 1 283 33 307 7.87e-16 78.6
MS.gene89007.t1 MTR_8g006270 27.727 220 141 6 70 283 91 298 9.76e-16 78.2
MS.gene89007.t1 MTR_7g013260 26.073 303 176 13 1 283 21 295 1.92e-15 77.0
MS.gene89007.t1 MTR_5g090630 29.167 216 129 5 77 282 94 295 2.58e-15 76.6
MS.gene89007.t1 MTR_5g087620 28.889 225 140 8 71 283 113 329 2.65e-15 77.0
MS.gene89007.t1 MTR_5g075440 25.086 291 186 8 28 294 36 318 3.54e-15 76.3
MS.gene89007.t1 MTR_6g033725 26.337 243 141 8 65 289 90 312 3.64e-15 76.3
MS.gene89007.t1 MTR_6g035295 25.574 305 195 10 1 283 27 321 4.86e-15 76.3
MS.gene89007.t1 MTR_7g070810 26.333 300 190 11 1 283 24 309 6.14e-15 75.9
MS.gene89007.t1 MTR_4g108250 23.607 305 204 9 1 283 26 323 1.76e-14 74.3
MS.gene89007.t1 MTR_6g013990 24.917 301 193 9 11 283 35 330 1.87e-14 74.3
MS.gene89007.t1 MTR_6g023665 38.739 111 52 3 175 283 211 307 1.88e-14 74.3
MS.gene89007.t1 MTR_8g006260 26.906 223 141 6 71 285 99 307 1.94e-14 74.3
MS.gene89007.t1 MTR_0184s0040 28.571 224 134 8 70 283 110 317 2.24e-14 73.9
MS.gene89007.t1 MTR_0078s0190 28.571 224 134 8 70 283 110 317 2.24e-14 73.9
MS.gene89007.t1 MTR_5g090580 26.887 212 129 6 82 282 108 304 3.01e-14 73.6
MS.gene89007.t1 MTR_5g039900 24.262 305 198 10 1 283 28 321 3.12e-14 73.6
MS.gene89007.t1 MTR_4g117950 27.103 321 181 16 8 306 28 317 3.43e-14 73.6
MS.gene89007.t1 MTR_5g090620 23.469 294 202 8 2 282 21 304 3.66e-14 73.6
MS.gene89007.t1 MTR_7g070940 26.282 312 196 13 1 295 24 318 3.71e-14 73.6
MS.gene89007.t1 MTR_5g090660 28.182 220 122 7 79 282 103 302 4.74e-14 73.2
MS.gene89007.t1 MTR_7g046490 29.442 197 114 7 95 283 119 298 5.69e-14 72.8
MS.gene89007.t1 MTR_6g033625 29.536 237 137 8 68 283 82 309 5.92e-14 72.8
MS.gene89007.t1 MTR_0184s0030 26.667 210 135 6 80 283 107 303 6.11e-14 72.8
MS.gene89007.t1 MTR_6g488280 39.623 106 48 3 180 283 209 300 7.55e-14 72.4
MS.gene89007.t1 MTR_0428s0010 39.623 106 48 3 180 283 209 300 7.55e-14 72.4
MS.gene89007.t1 MTR_0078s0200 26.667 210 135 6 80 283 107 303 1.09e-13 70.9
MS.gene89007.t1 MTR_8g027870 21.854 302 190 9 1 283 33 307 1.32e-13 71.6
MS.gene89007.t1 MTR_5g098930 27.586 203 127 7 89 282 106 297 1.40e-13 71.6
MS.gene89007.t1 MTR_1g040310 25.240 313 203 11 1 292 30 332 1.56e-13 71.6
MS.gene89007.t1 MTR_7g070930 23.127 307 200 11 1 283 29 323 1.64e-13 71.6
MS.gene89007.t1 MTR_4g128690 24.715 263 164 10 33 282 66 307 1.68e-13 71.2
MS.gene89007.t1 MTR_6g014270 22.397 317 205 10 1 283 22 331 2.17e-13 71.2
MS.gene89007.t1 MTR_0078s0060 28.194 227 130 9 70 283 95 301 2.38e-13 70.9
MS.gene89007.t1 MTR_4g128720 24.667 300 191 11 1 283 30 311 2.40e-13 70.9
MS.gene89007.t1 MTR_3g479610 28.846 156 106 3 141 293 21 174 2.43e-13 70.1
MS.gene89007.t1 MTR_8g006710 36.036 111 56 3 175 283 204 301 2.74e-13 70.9
MS.gene89007.t1 MTR_5g070040 26.695 236 143 8 60 282 93 311 2.93e-13 70.5
MS.gene89007.t1 MTR_5g027210 25.896 251 141 9 69 283 78 319 3.42e-13 70.5
MS.gene89007.t1 MTR_6g078320 30.201 149 87 3 141 283 186 323 3.79e-13 70.5
MS.gene89007.t1 MTR_0078s0010 27.434 226 137 8 70 283 92 302 3.80e-13 70.5
MS.gene89007.t1 MTR_8g012745 26.728 217 129 7 80 283 105 304 3.90e-13 70.1
MS.gene89007.t1 MTR_8g006230 27.650 217 128 7 78 283 45 243 4.05e-13 68.9
MS.gene89007.t1 MTR_5g090670 24.000 275 180 9 18 282 51 306 4.07e-13 70.1
MS.gene89007.t1 MTR_8g074550 28.972 214 122 7 84 283 109 306 5.68e-13 69.7
MS.gene89007.t1 MTR_5g058320 23.779 307 196 9 1 283 25 317 5.96e-13 69.7
MS.gene89007.t1 MTR_4g031800 28.505 214 120 9 83 283 115 308 8.27e-13 69.3
MS.gene89007.t1 MTR_3g009510 27.941 204 138 4 85 283 110 309 1.07e-12 68.9
MS.gene89007.t1 MTR_8g006730 32.500 120 66 3 166 283 196 302 1.08e-12 68.9
MS.gene89007.t1 MTR_8g465670 24.299 321 189 9 19 328 51 328 1.14e-12 68.9
MS.gene89007.t1 MTR_5g098960 25.098 255 167 8 40 283 64 305 1.30e-12 68.6
MS.gene89007.t1 MTR_7g047030 26.872 227 139 8 69 283 91 302 1.45e-12 68.6
MS.gene89007.t1 MTR_7g047270 26.872 227 139 8 69 283 91 302 1.45e-12 68.6
MS.gene89007.t1 MTR_6g035265 23.077 312 203 11 4 301 33 321 1.80e-12 68.2
MS.gene89007.t1 MTR_5g045970 27.245 323 192 15 1 296 31 337 1.84e-12 68.2
MS.gene89007.t1 MTR_7g102490 27.554 323 195 14 1 296 24 334 2.55e-12 67.8
MS.gene89007.t1 MTR_5g040030 25.806 217 149 5 85 293 123 335 2.94e-12 67.8
MS.gene89007.t1 MTR_5g090600 27.230 213 133 6 89 293 113 311 3.19e-12 67.4
MS.gene89007.t1 MTR_4g117980 22.500 320 214 11 1 301 26 330 3.79e-12 67.4
MS.gene89007.t1 MTR_7g102550 32.212 208 121 10 87 283 121 319 4.28e-12 67.0
MS.gene89007.t1 MTR_6g013435 30.201 149 92 4 141 283 61 203 4.51e-12 66.2
MS.gene89007.t1 MTR_8g012635 25.822 213 136 6 80 283 105 304 5.43e-12 66.6
MS.gene89007.t1 MTR_4g117890 24.057 212 130 6 82 283 114 304 6.42e-12 66.6
MS.gene89007.t1 MTR_5g019580 26.872 227 140 8 69 283 97 309 7.19e-12 66.6
MS.gene89007.t1 MTR_7g071040 22.697 304 205 10 1 283 32 326 9.94e-12 65.9
MS.gene89007.t1 MTR_7g117405 25.588 340 192 15 1 307 27 338 1.25e-11 65.9
MS.gene89007.t1 MTR_2g046750 27.928 222 133 9 91 304 123 325 1.52e-11 65.5
MS.gene89007.t1 MTR_5g031830 23.324 343 222 13 1 320 27 351 1.61e-11 65.5
MS.gene89007.t1 MTR_7g102560 24.828 290 178 11 28 296 59 329 1.66e-11 65.5
MS.gene89007.t1 MTR_2g035040 25.664 226 145 6 86 301 23 235 1.94e-11 64.7
MS.gene89007.t1 MTR_1g062380 23.762 303 204 12 1 283 31 326 2.16e-11 65.1
MS.gene89007.t1 MTR_2g098430 26.667 210 124 8 87 283 119 311 2.25e-11 65.1
MS.gene89007.t1 MTR_2g059240 26.400 250 157 7 49 282 83 321 2.63e-11 64.7
MS.gene89007.t1 MTR_8g009063 26.540 211 127 6 84 283 115 308 2.86e-11 64.7
MS.gene89007.t1 MTR_1g019510 26.549 226 131 8 71 283 96 299 3.10e-11 64.3
MS.gene89007.t1 MTR_8g081120 38.525 122 62 6 123 234 23 141 4.88e-11 60.5
MS.gene89007.t1 MTR_6g014300 22.186 311 195 10 1 283 27 318 5.39e-11 63.5
MS.gene89007.t1 MTR_0009s0240 25.561 223 138 7 82 291 110 317 5.51e-11 63.5
MS.gene89007.t1 MTR_7g070910 23.333 330 191 13 1 295 26 328 5.83e-11 63.5
MS.gene89007.t1 MTR_4g123553 23.952 334 197 13 2 303 31 339 6.19e-11 63.5
MS.gene89007.t1 MTR_6g052375 31.655 139 81 5 141 274 28 157 6.47e-11 62.8
MS.gene89007.t1 MTR_8g006220 25.442 283 160 8 19 283 50 299 6.56e-11 63.5
MS.gene89007.t1 MTR_5g031860 26.176 340 215 13 1 320 27 350 7.94e-11 63.2
MS.gene89007.t1 MTR_2g035020 24.407 295 193 10 4 283 33 312 8.82e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89007.t1 AT2G43840 40.702 285 154 6 3 283 24 297 4.12e-68 220
MS.gene89007.t1 AT2G43840 40.351 285 155 6 3 283 24 297 3.93e-67 217
MS.gene89007.t1 AT2G43820 39.789 284 158 5 3 283 24 297 1.59e-66 216
MS.gene89007.t1 AT1G05680 38.125 320 174 6 1 313 21 323 1.07e-61 203
MS.gene89007.t1 AT1G05675 37.812 320 175 6 1 313 21 323 2.48e-60 200
MS.gene89007.t1 AT2G31750 40.690 290 158 7 1 283 23 305 2.13e-59 197
MS.gene89007.t1 AT2G31750 40.690 290 158 7 1 283 23 305 9.13e-59 197
MS.gene89007.t1 AT2G31790 36.111 288 174 5 1 282 23 306 1.38e-54 185
MS.gene89007.t1 AT1G24100 36.332 289 174 5 1 283 26 310 3.12e-51 176
MS.gene89007.t1 AT4G15480 28.308 325 205 8 1 304 34 351 1.27e-37 140
MS.gene89007.t1 AT4G15490 27.667 300 193 8 1 283 23 315 1.57e-34 132
MS.gene89007.t1 AT1G05560 29.897 291 177 7 2 283 21 293 1.40e-33 129
MS.gene89007.t1 AT1G05560 29.897 291 177 7 2 283 71 343 2.65e-33 129
MS.gene89007.t1 AT3G21560 24.699 332 231 7 1 317 27 354 7.08e-32 124
MS.gene89007.t1 AT4G15550 30.464 302 173 9 2 283 29 313 8.53e-31 121
MS.gene89007.t1 AT2G23260 31.169 231 148 4 57 283 81 304 1.04e-28 115
MS.gene89007.t1 AT2G23250 27.907 301 195 10 1 295 13 297 2.21e-28 114
MS.gene89007.t1 AT1G22400 24.528 318 213 8 1 293 28 343 2.31e-28 115
MS.gene89007.t1 AT1G22380 24.290 317 214 8 1 293 28 342 5.28e-28 114
MS.gene89007.t1 AT1G22360 26.480 321 202 8 1 293 25 339 8.13e-28 113
MS.gene89007.t1 AT1G22360 26.480 321 202 8 1 293 25 339 1.00e-27 113
MS.gene89007.t1 AT1G05530 28.082 292 184 7 2 283 21 296 1.56e-27 112
MS.gene89007.t1 AT1G22370 27.157 313 203 9 1 292 28 336 1.60e-27 112
MS.gene89007.t1 AT2G28080 26.688 311 200 7 1 293 33 333 1.93e-27 112
MS.gene89007.t1 AT4G15500 25.503 298 197 6 1 283 24 311 1.19e-26 110
MS.gene89007.t1 AT1G78270 26.730 318 204 8 1 293 28 341 2.31e-23 100
MS.gene89007.t1 AT1G22340 25.402 311 198 8 1 283 28 332 5.80e-23 99.4
MS.gene89007.t1 AT2G36970 26.282 312 183 7 2 283 26 320 2.13e-21 95.1
MS.gene89007.t1 AT4G14090 25.552 317 213 10 2 312 29 328 4.26e-21 94.0
MS.gene89007.t1 AT2G30150 29.487 234 136 8 71 295 83 296 5.09e-21 93.6
MS.gene89007.t1 AT2G30150 29.237 236 138 8 69 295 97 312 6.60e-21 93.2
MS.gene89007.t1 AT3G02100 24.595 309 192 10 1 283 28 321 4.25e-20 90.9
MS.gene89007.t1 AT5G59590 25.667 300 182 11 1 283 25 300 1.74e-19 89.4
MS.gene89007.t1 AT3G16520 25.328 229 153 5 80 304 108 322 2.74e-19 88.6
MS.gene89007.t1 AT3G16520 25.328 229 153 5 80 304 108 322 3.70e-19 88.2
MS.gene89007.t1 AT3G16520 25.328 229 153 5 80 304 108 322 3.77e-19 88.2
MS.gene89007.t1 AT5G59580 26.333 300 179 12 1 283 24 298 5.67e-19 87.8
MS.gene89007.t1 AT2G36750 27.974 311 179 14 1 283 25 318 1.27e-18 86.7
MS.gene89007.t1 AT4G34131 31.858 226 118 12 75 283 117 323 9.63e-18 84.3
MS.gene89007.t1 AT3G21790 29.778 225 134 9 70 282 97 309 1.52e-17 83.6
MS.gene89007.t1 AT3G53150 25.872 344 225 11 1 320 37 374 1.72e-17 83.6
MS.gene89007.t1 AT2G15480 28.354 328 179 17 1 292 25 332 2.14e-17 83.2
MS.gene89007.t1 AT2G15480 28.354 328 179 17 1 292 25 332 2.28e-17 83.2
MS.gene89007.t1 AT2G23210 24.314 255 178 6 1 250 25 269 2.90e-17 81.3
MS.gene89007.t1 AT1G10400 29.596 223 130 10 85 296 117 323 3.54e-17 82.4
MS.gene89007.t1 AT5G37950 24.834 302 177 11 1 283 1 271 8.89e-17 80.5
MS.gene89007.t1 AT3G46650 26.102 295 170 13 1 283 25 283 1.17e-16 80.9
MS.gene89007.t1 AT5G37950 24.671 304 181 11 1 283 1 277 1.52e-16 79.7
MS.gene89007.t1 AT2G30140 29.075 227 134 9 78 295 103 311 2.16e-16 80.1
MS.gene89007.t1 AT2G36780 27.864 323 196 16 1 301 29 336 2.28e-16 80.1
MS.gene89007.t1 AT2G30140 29.204 226 134 9 78 295 103 310 2.82e-16 79.7
MS.gene89007.t1 AT2G36800 27.742 310 183 13 1 283 27 322 3.26e-16 79.7
MS.gene89007.t1 AT2G36770 25.490 306 194 12 1 283 29 323 5.69e-16 79.0
MS.gene89007.t1 AT4G01070 28.188 298 182 12 1 283 23 303 7.68e-16 77.8
MS.gene89007.t1 AT4G01070 28.188 298 182 12 1 283 23 303 7.82e-16 78.6
MS.gene89007.t1 AT2G36760 26.733 303 194 11 1 283 29 323 1.06e-15 78.2
MS.gene89007.t1 AT3G21800 28.079 203 129 5 88 282 113 306 1.25e-15 77.8
MS.gene89007.t1 AT2G15490 26.667 315 183 14 1 283 22 320 3.07e-15 76.6
MS.gene89007.t1 AT2G15490 26.667 315 183 14 1 283 22 320 3.68e-15 76.6
MS.gene89007.t1 AT4G34135 28.125 224 129 8 75 283 118 324 4.10e-15 76.3
MS.gene89007.t1 AT4G34135 28.125 224 129 8 75 283 118 324 4.43e-15 75.5
MS.gene89007.t1 AT1G22370 30.573 157 100 4 141 292 14 166 2.06e-14 73.2
MS.gene89007.t1 AT2G29730 29.091 220 130 6 74 282 105 309 2.97e-14 73.6
MS.gene89007.t1 AT3G21760 27.358 212 117 7 89 282 120 312 4.33e-14 73.2
MS.gene89007.t1 AT4G15280 29.064 203 122 5 89 282 148 337 5.46e-14 73.2
MS.gene89007.t1 AT4G15280 29.064 203 122 5 89 282 116 305 5.62e-14 72.8
MS.gene89007.t1 AT1G73880 28.807 243 134 11 72 297 108 328 5.88e-14 72.8
MS.gene89007.t1 AT3G46690 25.676 296 188 12 1 283 24 300 6.11e-14 72.8
MS.gene89007.t1 AT3G46670 24.749 299 186 11 1 283 24 299 9.56e-14 72.0
MS.gene89007.t1 AT3G21780 26.238 202 130 4 89 282 110 300 9.94e-14 72.0
MS.gene89007.t1 AT5G38010 23.279 305 188 10 1 283 25 305 1.48e-13 71.6
MS.gene89007.t1 AT5G38040 24.667 300 186 11 1 283 25 301 2.23e-13 70.9
MS.gene89007.t1 AT1G01390 26.786 224 138 6 70 283 96 303 4.30e-13 70.1
MS.gene89007.t1 AT3G53160 27.036 307 188 13 1 283 23 317 4.97e-13 70.1
MS.gene89007.t1 AT4G15260 27.778 198 121 6 93 282 2 185 5.10e-13 69.3
MS.gene89007.t1 AT1G01390 26.786 224 138 6 70 283 113 320 5.17e-13 70.1
MS.gene89007.t1 AT3G46680 23.986 296 193 11 1 283 24 300 5.53e-13 69.7
MS.gene89007.t1 AT1G01420 25.792 221 144 6 70 283 99 306 5.96e-13 69.7
MS.gene89007.t1 AT1G01420 25.792 221 144 6 70 283 96 303 6.15e-13 69.7
MS.gene89007.t1 AT5G05900 24.837 306 184 9 1 283 23 305 1.39e-12 68.6
MS.gene89007.t1 AT4G34138 26.339 224 142 8 69 283 114 323 1.47e-12 68.6
MS.gene89007.t1 AT5G17050 22.692 260 172 9 36 282 68 311 1.54e-12 68.6
MS.gene89007.t1 AT5G14860 26.190 252 138 8 85 311 125 353 2.01e-12 68.2
MS.gene89007.t1 AT1G07250 27.363 201 109 8 99 282 136 316 2.59e-12 67.8
MS.gene89007.t1 AT2G36790 26.316 304 194 11 1 283 28 322 3.30e-12 67.4
MS.gene89007.t1 AT3G46700 22.603 292 197 11 1 283 24 295 5.54e-12 66.6
MS.gene89007.t1 AT2G29740 28.696 230 127 10 70 282 109 318 1.78e-11 65.1
MS.gene89007.t1 AT5G05870 25.166 302 188 8 1 283 23 305 2.01e-11 65.1
MS.gene89007.t1 AT2G29710 29.952 207 115 8 89 282 119 308 2.67e-11 64.7
MS.gene89007.t1 AT2G29750 29.130 230 128 9 69 282 108 318 4.62e-11 63.9
MS.gene89007.t1 AT2G16890 26.172 256 138 11 85 309 119 354 5.18e-11 63.9
MS.gene89007.t1 AT3G46660 24.918 305 180 13 1 283 29 306 7.20e-11 63.5
MS.gene89007.t1 AT2G16890 26.172 256 138 11 85 309 119 354 8.46e-11 63.2

Find 51 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTTGCAAAGACACTTTC+TGG 0.136954 6.4:-12687526 MS.gene89007:CDS
TTGATGCAAGCTTCTGAATT+TGG 0.150999 6.4:+12686548 None:intergenic
CCTTCTTTCTTGTATCAATA+TGG 0.199884 6.4:-12687239 MS.gene89007:CDS
TTCTATGAAATGGAAGAATT+TGG 0.238964 6.4:-12686042 MS.gene89007:CDS
TCAGTTGTGTATGTTTCTTT+TGG 0.253804 6.4:-12686500 MS.gene89007:CDS
CATAAGCCATTTCCTTTGTT+TGG 0.272548 6.4:+12686453 None:intergenic
TTTGATGTCTCCAAGAGTTT+TGG 0.276354 6.4:-12687404 MS.gene89007:CDS
TCAAAACGTTTATCCCAAAA+AGG 0.279860 6.4:-12687683 MS.gene89007:CDS
CTCGAAGATGACAATGACTA+TGG 0.336663 6.4:-12686587 MS.gene89007:CDS
GACTATGGGATAAGCACTTT+TGG 0.341822 6.4:-12686572 MS.gene89007:CDS
CAAACAAAGGAAATGGCTTA+TGG 0.341938 6.4:-12686452 MS.gene89007:CDS
ACAATTTCGCTCTTCGAAAT+CGG 0.344070 6.4:+12687299 None:intergenic
CGAAGATTGATCAGGCTGAT+TGG 0.364867 6.4:-12687175 MS.gene89007:CDS
TGAAGAAGAATTCTATGAAA+TGG 0.379806 6.4:-12686052 MS.gene89007:CDS
GGAAATAATGGAGATTGAAA+AGG 0.392787 6.4:-12686084 MS.gene89007:CDS
AAATCAGCAGGTTGAAGCTT+TGG 0.394426 6.4:+12687263 None:intergenic
ACTGTGGAATGTATTTCATA+TGG 0.398457 6.4:-12686421 MS.gene89007:CDS
ACATACACAACTGAGTCTTT+TGG 0.400842 6.4:+12686509 None:intergenic
GGATTGCTTAAAGGAAATAA+TGG 0.406887 6.4:-12686096 MS.gene89007:intron
GAAGATTGATCAGGCTGATT+GGG 0.416318 6.4:-12687174 MS.gene89007:CDS
TCATAGACAACACAATCAAC+AGG 0.420837 6.4:+12687446 None:intergenic
TGAAGACCAAACAAAGGAAA+TGG 0.443123 6.4:-12686459 MS.gene89007:CDS
GAAATAATGGAGATTGAAAA+GGG 0.451957 6.4:-12686083 MS.gene89007:CDS
TGAGTTAAGAAAACAGCAAC+AGG 0.452642 6.4:+12687377 None:intergenic
TAGTGAACACCATTTCCATT+TGG 0.456695 6.4:-12687646 MS.gene89007:CDS
GGTTGAAGCTTTGGCAATCC+AGG 0.457185 6.4:+12687272 None:intergenic
ATTCAGAAGCTTGCATCAAA+TGG 0.462754 6.4:-12686544 MS.gene89007:CDS
TATTTAGGTTGTGAATTGGT+TGG 0.467650 6.4:-12686672 MS.gene89007:intron
AAAGACACTTTCTGGAAAGT+TGG 0.481155 6.4:-12687518 MS.gene89007:CDS
TGAATTGGTTGGCGAAGAAA+TGG 0.485235 6.4:-12686661 MS.gene89007:CDS
AACAGGAATTCCAAAACTCT+TGG 0.485454 6.4:+12687394 None:intergenic
TCTATGATGCTTTCTTACAT+TGG 0.487232 6.4:-12687430 MS.gene89007:CDS
TGTTTGGTCTTCACTAAGAC+CGG 0.491882 6.4:+12686469 None:intergenic
AAATGGCGTTTAAAGACAAT+AGG 0.494924 6.4:-12686644 MS.gene89007:CDS
AAGAGCGAAATTGTGTTACC+TGG 0.503915 6.4:-12687290 MS.gene89007:CDS
TATCAATATGGAACTCATCC+TGG 0.512534 6.4:-12687227 MS.gene89007:CDS
CCATATTGATACAAGAAAGA+AGG 0.534781 6.4:+12687239 None:intergenic
AAGAAAGAAGGCAAATCAGC+AGG 0.535346 6.4:+12687251 None:intergenic
CTGTGGAATGTATTTCATAT+GGG 0.536286 6.4:-12686420 MS.gene89007:CDS
GAAACTGAAAGCATTTCAGA+TGG 0.552011 6.4:-12687587 MS.gene89007:CDS
AAGAACATCGATGGAATAGA+TGG 0.553344 6.4:+12686620 None:intergenic
GCTAGGAATTCTGTTGATGA+GGG 0.553448 6.4:-12686020 MS.gene89007:CDS
AATGTCATCAGCAGAAAACA+TGG 0.565111 6.4:-12687549 MS.gene89007:CDS
GGCTAGGAATTCTGTTGATG+AGG 0.567753 6.4:-12686021 MS.gene89007:CDS
TGAAATGGAAGAATTTGGCT+AGG 0.595892 6.4:-12686037 MS.gene89007:CDS
AGGAATTCTGTTGATGAGGG+TGG 0.604042 6.4:-12686017 MS.gene89007:CDS
TCGAAGATGACAATGACTAT+GGG 0.605473 6.4:-12686586 MS.gene89007:CDS
GCTTATGGATTAAGAGACTG+TGG 0.640079 6.4:-12686437 MS.gene89007:CDS
GTAAGAATATCAAAGTAACC+AGG 0.674674 6.4:+12687209 None:intergenic
TCTTAGTGAAGACCAAACAA+AGG 0.695450 6.4:-12686465 MS.gene89007:CDS
CATAGACAACACAATCAACA+GGG 0.697199 6.4:+12687447 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATATCTACAAATTTATT+AGG - chr6.4:12686722-12686741 MS.gene89007:intron 10.0%
!! TTATATCTACAAATTTATTA+GGG - chr6.4:12686723-12686742 MS.gene89007:intron 10.0%
!!! CTAATATGAAAATTTTATTT+AGG - chr6.4:12686973-12686992 MS.gene89007:intron 10.0%
!!! TTCATAACTATTTTTTTTTA+GGG + chr6.4:12686811-12686830 None:intergenic 10.0%
!! TAATAATTTCAGAAAATGAA+TGG - chr6.4:12686596-12686615 MS.gene89007:CDS 15.0%
!!! CTTCATAACTATTTTTTTTT+AGG + chr6.4:12686812-12686831 None:intergenic 15.0%
!! ATCAAAATTACATATAACCA+AGG + chr6.4:12686937-12686956 None:intergenic 20.0%
!! CTTAATATTATAGAGAATTG+CGG - chr6.4:12686838-12686857 MS.gene89007:intron 20.0%
!!! ATTTTATTTAGGTTGTGAAT+TGG - chr6.4:12686984-12687003 MS.gene89007:intron 20.0%
!!! ATTTTCATGCTTTTATGAAA+TGG - chr6.4:12686329-12686348 MS.gene89007:intron 20.0%
!!! GCATTTTTTATTTAAAACCT+TGG - chr6.4:12686917-12686936 MS.gene89007:intron 20.0%
! AGAAAGGTTTAATTGTCAAT+TGG - chr6.4:12687320-12687339 MS.gene89007:CDS 25.0%
! ATAAGTAAATTACTTACCTC+TGG + chr6.4:12686541-12686560 None:intergenic 25.0%
! ATTGTTGATGTATGGAAAAT+TGG - chr6.4:12687490-12687509 MS.gene89007:CDS 25.0%
! CAAAGTTTATTGTTGATGTA+TGG - chr6.4:12687482-12687501 MS.gene89007:CDS 25.0%
! CGCAATTCTCTATAATATTA+AGG + chr6.4:12686840-12686859 None:intergenic 25.0%
! TGAAGAAGAATTCTATGAAA+TGG - chr6.4:12687608-12687627 MS.gene89007:CDS 25.0%
! TTCTATGAAATGGAAGAATT+TGG - chr6.4:12687618-12687637 MS.gene89007:CDS 25.0%
!! AATGACTCCAAAAATTCTTT+TGG + chr6.4:12687295-12687314 None:intergenic 25.0%
!! ATGACTCCAAAAATTCTTTT+GGG + chr6.4:12687294-12687313 None:intergenic 25.0%
!! GAAATAATGGAGATTGAAAA+GGG - chr6.4:12687577-12687596 MS.gene89007:CDS 25.0%
!! TAAACTCCCAAAAGAATTTT+TGG - chr6.4:12687285-12687304 MS.gene89007:CDS 25.0%
!! TGTGATTTTTACTCCTTTTT+GGG + chr6.4:12685993-12686012 None:intergenic 25.0%
!!! TTTGTTGATTTTGTTCCAAA+TGG + chr6.4:12686032-12686051 None:intergenic 25.0%
AAATGGCGTTTAAAGACAAT+AGG - chr6.4:12687016-12687035 MS.gene89007:intron 30.0%
ACTGTGGAATGTATTTCATA+TGG - chr6.4:12687239-12687258 MS.gene89007:CDS 30.0%
CCATATTGATACAAGAAAGA+AGG + chr6.4:12686424-12686443 None:intergenic 30.0%
CCTTCTTTCTTGTATCAATA+TGG - chr6.4:12686421-12686440 MS.gene89007:CDS 30.0%
CTGTGGAATGTATTTCATAT+GGG - chr6.4:12687240-12687259 MS.gene89007:CDS 30.0%
GGATTGCTTAAAGGAAATAA+TGG - chr6.4:12687564-12687583 MS.gene89007:CDS 30.0%
GTAAGAATATCAAAGTAACC+AGG + chr6.4:12686454-12686473 None:intergenic 30.0%
TCAAAACGTTTATCCCAAAA+AGG - chr6.4:12685977-12685996 MS.gene89007:CDS 30.0%
TCTATGATGCTTTCTTACAT+TGG - chr6.4:12686230-12686249 MS.gene89007:intron 30.0%
TTGGAGTCATTATTAGAGAA+AGG - chr6.4:12687304-12687323 MS.gene89007:CDS 30.0%
! AACAATCATGGATTGCTTAA+AGG - chr6.4:12687555-12687574 MS.gene89007:CDS 30.0%
! CAGTTGTGTATGTTTCTTTT+GGG - chr6.4:12687161-12687180 MS.gene89007:CDS 30.0%
! GATTTTGTTCCAAATGGAAA+TGG + chr6.4:12686026-12686045 None:intergenic 30.0%
! GGAAATAATGGAGATTGAAA+AGG - chr6.4:12687576-12687595 MS.gene89007:CDS 30.0%
! GTGTGATTTTTACTCCTTTT+TGG + chr6.4:12685994-12686013 None:intergenic 30.0%
! TATCATAGACTTTTGATCGA+AGG + chr6.4:12686691-12686710 None:intergenic 30.0%
! TCAATTTTCGAAGATTGATC+AGG - chr6.4:12686477-12686496 MS.gene89007:CDS 30.0%
! TCAGTTGTGTATGTTTCTTT+TGG - chr6.4:12687160-12687179 MS.gene89007:CDS 30.0%
! TTTTATCTATCACTTTAGCG+TGG + chr6.4:12686895-12686914 None:intergenic 30.0%
!! TATTTAGGTTGTGAATTGGT+TGG - chr6.4:12686988-12687007 MS.gene89007:intron 30.0%
!! TTTTGGGAGTTTACTCTTTT+CGG + chr6.4:12687278-12687297 None:intergenic 30.0%
!!! AGAAGTTGAGAAAGTGTTTT+TGG + chr6.4:12686169-12686188 None:intergenic 30.0%
!!! ATTTCAGATGGTTTTGACAA+TGG - chr6.4:12686085-12686104 MS.gene89007:CDS 30.0%
AACAGGAATTCCAAAACTCT+TGG + chr6.4:12686269-12686288 None:intergenic 35.0%
AAGAACATCGATGGAATAGA+TGG + chr6.4:12687043-12687062 None:intergenic 35.0%
AATCTTGCAAAGACACTTTC+TGG - chr6.4:12686134-12686153 MS.gene89007:intron 35.0%
AATGTCATCAGCAGAAAACA+TGG - chr6.4:12686111-12686130 MS.gene89007:intron 35.0%
ACAATTTCGCTCTTCGAAAT+CGG + chr6.4:12686364-12686383 None:intergenic 35.0%
AGTTAGAAGGGAAACAATCA+TGG - chr6.4:12687543-12687562 MS.gene89007:CDS 35.0%
ATGAGAAAGGGATAGTTAGA+AGG - chr6.4:12687530-12687549 MS.gene89007:CDS 35.0%
ATTCAGAAGCTTGCATCAAA+TGG - chr6.4:12687116-12687135 MS.gene89007:intron 35.0%
CAAACAAAGGAAATGGCTTA+TGG - chr6.4:12687208-12687227 MS.gene89007:CDS 35.0%
CATAAGCCATTTCCTTTGTT+TGG + chr6.4:12687210-12687229 None:intergenic 35.0%
CATAGACAACACAATCAACA+GGG + chr6.4:12686216-12686235 None:intergenic 35.0%
TAGTGAACACCATTTCCATT+TGG - chr6.4:12686014-12686033 MS.gene89007:CDS 35.0%
TATCAATATGGAACTCATCC+TGG - chr6.4:12686433-12686452 MS.gene89007:CDS 35.0%
TCATAGACAACACAATCAAC+AGG + chr6.4:12686217-12686236 None:intergenic 35.0%
TCGAAGATGACAATGACTAT+GGG - chr6.4:12687074-12687093 MS.gene89007:intron 35.0%
TCTTAGTGAAGACCAAACAA+AGG - chr6.4:12687195-12687214 MS.gene89007:CDS 35.0%
TGAAATGGAAGAATTTGGCT+AGG - chr6.4:12687623-12687642 MS.gene89007:CDS 35.0%
TGAAGACCAAACAAAGGAAA+TGG - chr6.4:12687201-12687220 MS.gene89007:CDS 35.0%
TGAGAAAGGGATAGTTAGAA+GGG - chr6.4:12687531-12687550 MS.gene89007:CDS 35.0%
TGAGTTAAGAAAACAGCAAC+AGG + chr6.4:12686286-12686305 None:intergenic 35.0%
TTGATGCAAGCTTCTGAATT+TGG + chr6.4:12687115-12687134 None:intergenic 35.0%
! AAAGACACTTTCTGGAAAGT+TGG - chr6.4:12686142-12686161 MS.gene89007:intron 35.0%
! ACATACACAACTGAGTCTTT+TGG + chr6.4:12687154-12687173 None:intergenic 35.0%
! CTTTTGTCTAAGAACATCGA+TGG + chr6.4:12687052-12687071 None:intergenic 35.0%
! GTTTTGTAACACATTGTGGT+TGG - chr6.4:12687383-12687402 MS.gene89007:CDS 35.0%
! TTTGATGTCTCCAAGAGTTT+TGG - chr6.4:12686256-12686275 MS.gene89007:intron 35.0%
!! GAAACTGAAAGCATTTCAGA+TGG - chr6.4:12686073-12686092 MS.gene89007:CDS 35.0%
!! GGTTGTTTTGTAACACATTG+TGG - chr6.4:12687379-12687398 MS.gene89007:CDS 35.0%
!!! TAGCGTGGTTTTTGATTTTG+CGG + chr6.4:12686880-12686899 None:intergenic 35.0%
AAAGCTCTTGCTGATGAGAA+AGG - chr6.4:12687517-12687536 MS.gene89007:CDS 40.0%
AAGAAAGAAGGCAAATCAGC+AGG + chr6.4:12686412-12686431 None:intergenic 40.0%
AAGAGCGAAATTGTGTTACC+TGG - chr6.4:12686370-12686389 MS.gene89007:intron 40.0%
AAGCTCTTGCTGATGAGAAA+GGG - chr6.4:12687518-12687537 MS.gene89007:CDS 40.0%
CTCGAAGATGACAATGACTA+TGG - chr6.4:12687073-12687092 MS.gene89007:intron 40.0%
GAAGATTGATCAGGCTGATT+GGG - chr6.4:12686486-12686505 MS.gene89007:CDS 40.0%
GTGATTTGATCTGTCCAAAG+TGG + chr6.4:12687457-12687476 None:intergenic 40.0%
TGAATTGGTTGGCGAAGAAA+TGG - chr6.4:12686999-12687018 MS.gene89007:intron 40.0%
TGTCTGACAAAACTGATGTC+CGG + chr6.4:12686659-12686678 None:intergenic 40.0%
TGTGTTAGCACTTGTAGTTG+TGG + chr6.4:12687349-12687368 None:intergenic 40.0%
! AAATCAGCAGGTTGAAGCTT+TGG + chr6.4:12686400-12686419 None:intergenic 40.0%
! GACTATGGGATAAGCACTTT+TGG - chr6.4:12687088-12687107 MS.gene89007:intron 40.0%
! GCTAGGAATTCTGTTGATGA+GGG - chr6.4:12687640-12687659 MS.gene89007:CDS 40.0%
! GCTTATGGATTAAGAGACTG+TGG - chr6.4:12687223-12687242 MS.gene89007:CDS 40.0%
! TGTTTGGTCTTCACTAAGAC+CGG + chr6.4:12687194-12687213 None:intergenic 40.0%
!! ACATCAGTTTTGTCAGACAC+CGG - chr6.4:12686660-12686679 MS.gene89007:CDS 40.0%
!! ACATTGGAAGCTTTGAGTGT+TGG - chr6.4:12687412-12687431 MS.gene89007:CDS 40.0%
!! GTATGTTTCTTTTGGGAGCT+TGG - chr6.4:12687168-12687187 MS.gene89007:CDS 40.0%
!!! GTTTTTTGAACTTGAGCCAG+AGG - chr6.4:12686522-12686541 MS.gene89007:CDS 40.0%
!!! TCAGATGGTTTTGACAATGG+AGG - chr6.4:12686088-12686107 MS.gene89007:intron 40.0%
CAAAGTGGCATTGCAATCAC+CGG + chr6.4:12687442-12687461 None:intergenic 45.0%
CGAAGATTGATCAGGCTGAT+TGG - chr6.4:12686485-12686504 MS.gene89007:CDS 45.0%
GGCTAGGAATTCTGTTGATG+AGG - chr6.4:12687639-12687658 MS.gene89007:CDS 45.0%
GTGCTAACACATGAAGCTGT+TGG - chr6.4:12687358-12687377 MS.gene89007:CDS 45.0%
TTGTGGTTGGAACTCGACAT+TGG - chr6.4:12687396-12687415 MS.gene89007:CDS 45.0%
! AGGAATTCTGTTGATGAGGG+TGG - chr6.4:12687643-12687662 MS.gene89007:CDS 45.0%
!! AGCTTTGAGTGTTGGAGTTC+CGG - chr6.4:12687420-12687439 MS.gene89007:CDS 45.0%
!! CTTTTGATCGAAGGTGCATC+CGG + chr6.4:12686682-12686701 None:intergenic 45.0%
! CGGTGATTGCAATGCCACTT+TGG - chr6.4:12687440-12687459 MS.gene89007:CDS 50.0%
! GGTTGAAGCTTTGGCAATCC+AGG + chr6.4:12686391-12686410 None:intergenic 50.0%
!! GTTTCTTTTGGGAGCTTGGC+CGG - chr6.4:12687172-12687191 MS.gene89007:CDS 50.0%
TGTCAGTGTCTTGCGACTGC+CGG - chr6.4:12686637-12686656 MS.gene89007:CDS 55.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 12685965 12687717 12685965 ID=MS.gene89007
chr6.4 mRNA 12685965 12687717 12685965 ID=MS.gene89007.t1;Parent=MS.gene89007
chr6.4 exon 12687139 12687717 12687139 ID=MS.gene89007.t1.exon1;Parent=MS.gene89007.t1
chr6.4 CDS 12687139 12687717 12687139 ID=cds.MS.gene89007.t1;Parent=MS.gene89007.t1
chr6.4 exon 12686418 12686687 12686418 ID=MS.gene89007.t1.exon2;Parent=MS.gene89007.t1
chr6.4 CDS 12686418 12686687 12686418 ID=cds.MS.gene89007.t1;Parent=MS.gene89007.t1
chr6.4 exon 12685965 12686105 12685965 ID=MS.gene89007.t1.exon3;Parent=MS.gene89007.t1
chr6.4 CDS 12685965 12686105 12685965 ID=cds.MS.gene89007.t1;Parent=MS.gene89007.t1
Gene Sequence

>MS.gene89007

ATGCTTCAATTCTCAAAACGTTTATCCCAAAAAGGAGTAAAAATCACACTAGTGAACACCATTTCCATTTGGAACAAAATCAACAAAAACATTGATCTCAATTCAATCGAAACTGAAAGCATTTCAGATGGTTTTGACAATGGAGGAATGTCATCAGCAGAAAACATGGAATCTTGCAAAGACACTTTCTGGAAAGTTGGACCAAAAACACTTTCTCAACTTCTTCATAAACTTCAAAGTTCAAACAACCCTGTTGATTGTGTTGTCTATGATGCTTTCTTACATTGGACATTTGATGTCTCCAAGAGTTTTGGAATTCCTGTTGCTGTTTTCTTAACTCAAGCTTGTTCTGTTAATACTATCAATTTTCATGCTTTTATGAAATGGATTGAGTTGCCGATTTCGAAGAGCGAAATTGTGTTACCTGGATTGCCAAAGCTTCAACCTGCTGATTTGCCTTCTTTCTTGTATCAATATGGAACTCATCCTGGTTACTTTGATATTCTTACAAATCAATTTTCGAAGATTGATCAGGCTGATTGGGTTCTTGTCAACACGTTTTTTGAACTTGAGCCAGAGGTAAGTAATTTACTTATATTCTATGACACTAGCATTTACAATTTGATATAACTAATAATTTCAGAAAATGAATGGATCAAATGTAATCACATGTGTCAGTGTCTTGCGACTGCCGGACATCAGTTTTGTCAGACACCGGATGCACCTTCGATCAAAAGTCTATGATACTAAAACATATATTATATCTACAAATTTATTAGGGTTTTGATTTTATCAATTGCATAATGTTGTTGCATGCTGCTAGTTATAGTTATGAAGAAGATTCCCTAAAAAAAAATAGTTATGAAGATGATCCTTAATATTATAGAGAATTGCGGACAAATGTTGCAATCACCGCAAAATCAAAAACCACGCTAAAGTGATAGATAAAATTGCATTTTTTATTTAAAACCTTGGTTATATGTAATTTTGATATTTGATGATTTAAATCTAATATGAAAATTTTATTTAGGTTGTGAATTGGTTGGCGAAGAAATGGCGTTTAAAGACAATAGGACCATCTATTCCATCGATGTTCTTAGACAAAAGACTCGAAGATGACAATGACTATGGGATAAGCACTTTTGGTCCAAATTCAGAAGCTTGCATCAAATGGCTAGATAACAAACCAAAAGACTCAGTTGTGTATGTTTCTTTTGGGAGCTTGGCCGGTCTTAGTGAAGACCAAACAAAGGAAATGGCTTATGGATTAAGAGACTGTGGAATGTATTTCATATGGGTTGTTAGAGATTCCGAAAAGAGTAAACTCCCAAAAGAATTTTTGGAGTCATTATTAGAGAAAGGTTTAATTGTCAATTGGTGTCCACAACTACAAGTGCTAACACATGAAGCTGTTGGTTGTTTTGTAACACATTGTGGTTGGAACTCGACATTGGAAGCTTTGAGTGTTGGAGTTCCGGTGATTGCAATGCCACTTTGGACAGATCAAATCACAAATGCAAAGTTTATTGTTGATGTATGGAAAATTGGAGTCAAAGCTCTTGCTGATGAGAAAGGGATAGTTAGAAGGGAAACAATCATGGATTGCTTAAAGGAAATAATGGAGATTGAAAAGGGAGATGAAATGAAGAAGAATTCTATGAAATGGAAGAATTTGGCTAGGAATTCTGTTGATGAGGGTGGAAGTTCTGATAAGAATATTGTTGATTTTATGAATGAATTGACATTATGCTAA

Protein sequence

>MS.gene89007.t1

MLQFSKRLSQKGVKITLVNTISIWNKINKNIDLNSIETESISDGFDNGGMSSAENMESCKDTFWKVGPKTLSQLLHKLQSSNNPVDCVVYDAFLHWTFDVSKSFGIPVAVFLTQACSVNTINFHAFMKWIELPISKSEIVLPGLPKLQPADLPSFLYQYGTHPGYFDILTNQFSKIDQADWVLVNTFFELEPEVVNWLAKKWRLKTIGPSIPSMFLDKRLEDDNDYGISTFGPNSEACIKWLDNKPKDSVVYVSFGSLAGLSEDQTKEMAYGLRDCGMYFIWVEIMEIEKGDEMKKNSMKWKNLARNSVDEGGSSDKNIVDFMNELTLC