Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89101.t1 | XP_013465536.1 | 95.7 | 304 | 13 | 0 | 1 | 304 | 1 | 304 | 1.00E-87 | 333.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89101.t1 | O35142 | 63.9 | 291 | 105 | 0 | 9 | 299 | 7 | 297 | 2.9e-43 | 177.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89101.t1 | A0A072VD91 | 95.7 | 304 | 13 | 0 | 1 | 304 | 1 | 304 | 7.2e-88 | 333.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055225 | MS.gene89101 | 0.834706 | 2.57E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89101.t1 | MTR_2g102267 | 97.697 | 304 | 7 | 0 | 1 | 304 | 1 | 304 | 0.0 | 621 |
| MS.gene89101.t1 | MTR_4g011950 | 65.101 | 298 | 104 | 0 | 5 | 302 | 3 | 300 | 6.03e-146 | 434 |
| MS.gene89101.t1 | MTR_2g102277 | 64.094 | 298 | 107 | 0 | 5 | 302 | 3 | 300 | 1.47e-143 | 427 |
| MS.gene89101.t1 | MTR_2g102277 | 64.310 | 297 | 106 | 0 | 5 | 301 | 3 | 299 | 1.48e-143 | 427 |
| MS.gene89101.t1 | MTR_1g090827 | 32.278 | 316 | 181 | 6 | 12 | 298 | 4 | 315 | 4.59e-48 | 172 |
| MS.gene89101.t1 | MTR_1g090827 | 28.916 | 166 | 114 | 3 | 94 | 259 | 2 | 163 | 6.68e-21 | 93.6 |
| MS.gene89101.t1 | MTR_4g071130 | 31.646 | 316 | 183 | 6 | 12 | 298 | 4 | 315 | 7.73e-47 | 169 |
| MS.gene89101.t1 | MTR_3g106080 | 28.638 | 213 | 137 | 4 | 97 | 309 | 415 | 612 | 2.84e-22 | 97.4 |
| MS.gene89101.t1 | MTR_3g106080 | 22.414 | 232 | 176 | 3 | 13 | 244 | 415 | 642 | 3.98e-13 | 70.1 |
| MS.gene89101.t1 | MTR_4g119620 | 26.068 | 234 | 159 | 5 | 45 | 268 | 13 | 242 | 2.68e-21 | 92.8 |
| MS.gene89101.t1 | MTR_4g119620 | 25.676 | 222 | 161 | 3 | 40 | 258 | 101 | 321 | 5.52e-19 | 86.3 |
| MS.gene89101.t1 | MTR_4g119620 | 29.193 | 161 | 102 | 3 | 132 | 283 | 15 | 172 | 9.16e-15 | 73.9 |
| MS.gene89101.t1 | MTR_1g072140 | 26.383 | 235 | 168 | 4 | 46 | 279 | 14 | 244 | 3.04e-21 | 92.4 |
| MS.gene89101.t1 | MTR_1g072140 | 25.197 | 254 | 186 | 3 | 8 | 258 | 60 | 312 | 3.86e-21 | 92.0 |
| MS.gene89101.t1 | MTR_1g072140 | 31.646 | 158 | 105 | 2 | 138 | 295 | 21 | 175 | 6.48e-17 | 80.1 |
| MS.gene89101.t1 | MTR_2g436510 | 31.792 | 173 | 114 | 3 | 97 | 269 | 166 | 334 | 2.34e-20 | 91.3 |
| MS.gene89101.t1 | MTR_2g436510 | 22.917 | 240 | 180 | 4 | 20 | 259 | 173 | 407 | 9.29e-15 | 74.7 |
| MS.gene89101.t1 | MTR_6g004040 | 28.125 | 192 | 134 | 3 | 74 | 265 | 32 | 219 | 2.05e-19 | 89.0 |
| MS.gene89101.t1 | MTR_6g004040 | 22.887 | 284 | 208 | 7 | 11 | 292 | 10 | 284 | 8.69e-16 | 78.2 |
| MS.gene89101.t1 | MTR_6g004040 | 29.310 | 174 | 118 | 4 | 93 | 265 | 8 | 177 | 3.10e-15 | 76.6 |
| MS.gene89101.t1 | MTR_4g105700 | 26.606 | 218 | 148 | 6 | 72 | 280 | 32 | 246 | 1.13e-17 | 84.0 |
| MS.gene89101.t1 | MTR_4g105700 | 29.353 | 201 | 126 | 6 | 71 | 258 | 372 | 569 | 3.05e-13 | 70.9 |
| MS.gene89101.t1 | MTR_4g105700 | 23.377 | 231 | 164 | 4 | 71 | 291 | 417 | 644 | 1.33e-12 | 68.9 |
| MS.gene89101.t1 | MTR_4g105700 | 30.000 | 160 | 108 | 4 | 99 | 258 | 498 | 653 | 7.10e-12 | 66.6 |
| MS.gene89101.t1 | MTR_2g012630 | 27.234 | 235 | 160 | 7 | 41 | 272 | 40 | 266 | 3.37e-17 | 82.8 |
| MS.gene89101.t1 | MTR_2g012630 | 24.324 | 222 | 164 | 3 | 75 | 296 | 32 | 249 | 1.18e-14 | 75.1 |
| MS.gene89101.t1 | MTR_2g012630 | 26.000 | 200 | 143 | 4 | 93 | 291 | 7 | 202 | 3.39e-13 | 70.5 |
| MS.gene89101.t1 | MTR_2g012630 | 27.234 | 235 | 160 | 7 | 41 | 272 | 40 | 266 | 4.28e-17 | 82.4 |
| MS.gene89101.t1 | MTR_2g012630 | 24.324 | 222 | 164 | 3 | 75 | 296 | 32 | 249 | 1.28e-14 | 75.1 |
| MS.gene89101.t1 | MTR_2g012630 | 26.000 | 200 | 143 | 4 | 93 | 291 | 7 | 202 | 4.50e-13 | 70.1 |
| MS.gene89101.t1 | MTR_4g123597 | 25.735 | 272 | 184 | 7 | 20 | 280 | 409 | 673 | 5.37e-17 | 82.0 |
| MS.gene89101.t1 | MTR_5g022690 | 27.957 | 186 | 131 | 3 | 73 | 258 | 293 | 475 | 2.97e-16 | 79.3 |
| MS.gene89101.t1 | MTR_3g045130 | 25.106 | 235 | 169 | 6 | 37 | 269 | 292 | 521 | 4.35e-16 | 79.0 |
| MS.gene89101.t1 | MTR_8g038550 | 25.106 | 235 | 167 | 5 | 27 | 258 | 193 | 421 | 7.37e-16 | 78.6 |
| MS.gene89101.t1 | MTR_8g038550 | 24.348 | 230 | 168 | 5 | 31 | 258 | 239 | 464 | 3.37e-12 | 67.4 |
| MS.gene89101.t1 | MTR_8g038550 | 29.487 | 156 | 104 | 4 | 20 | 172 | 312 | 464 | 5.06e-11 | 63.9 |
| MS.gene89101.t1 | MTR_7g086360 | 26.636 | 214 | 152 | 4 | 55 | 267 | 51 | 260 | 2.17e-15 | 76.3 |
| MS.gene89101.t1 | MTR_8g106790 | 29.630 | 216 | 132 | 8 | 97 | 299 | 11 | 219 | 3.67e-15 | 75.1 |
| MS.gene89101.t1 | MTR_8g106790 | 26.786 | 224 | 152 | 7 | 10 | 228 | 56 | 272 | 4.80e-15 | 74.7 |
| MS.gene89101.t1 | MTR_8g106790 | 27.184 | 206 | 141 | 4 | 74 | 272 | 31 | 234 | 5.33e-15 | 74.7 |
| MS.gene89101.t1 | MTR_5g016350 | 27.645 | 293 | 178 | 9 | 27 | 291 | 179 | 465 | 1.09e-14 | 74.7 |
| MS.gene89101.t1 | MTR_5g016350 | 27.645 | 293 | 178 | 9 | 27 | 291 | 243 | 529 | 1.38e-14 | 74.7 |
| MS.gene89101.t1 | MTR_4g125710 | 23.827 | 277 | 174 | 8 | 30 | 282 | 31 | 294 | 1.42e-14 | 73.6 |
| MS.gene89101.t1 | MTR_2g019400 | 29.487 | 156 | 99 | 3 | 104 | 259 | 1 | 145 | 2.66e-14 | 72.0 |
| MS.gene89101.t1 | MTR_2g019400 | 21.073 | 261 | 175 | 6 | 20 | 258 | 1 | 252 | 5.07e-12 | 65.5 |
| MS.gene89101.t1 | MTR_4g095058 | 28.856 | 201 | 129 | 4 | 100 | 291 | 327 | 522 | 3.83e-14 | 73.2 |
| MS.gene89101.t1 | MTR_4g095058 | 28.856 | 201 | 129 | 4 | 100 | 291 | 329 | 524 | 4.21e-14 | 73.2 |
| MS.gene89101.t1 | MTR_3g052220 | 31.818 | 176 | 108 | 5 | 95 | 262 | 209 | 380 | 1.72e-13 | 71.2 |
| MS.gene89101.t1 | MTR_1g011610 | 20.909 | 220 | 168 | 3 | 39 | 258 | 602 | 815 | 3.86e-13 | 70.5 |
| MS.gene89101.t1 | MTR_1g011610 | 20.909 | 220 | 168 | 3 | 39 | 258 | 593 | 806 | 4.25e-13 | 70.1 |
| MS.gene89101.t1 | MTR_1g054300 | 32.867 | 143 | 93 | 2 | 116 | 258 | 342 | 481 | 9.50e-13 | 68.9 |
| MS.gene89101.t1 | MTR_1g054300 | 34.615 | 130 | 76 | 5 | 136 | 259 | 111 | 237 | 1.47e-12 | 68.2 |
| MS.gene89101.t1 | MTR_5g016370 | 28.155 | 206 | 124 | 5 | 100 | 291 | 346 | 541 | 2.37e-12 | 67.8 |
| MS.gene89101.t1 | MTR_5g016370 | 22.689 | 238 | 169 | 6 | 31 | 259 | 361 | 592 | 9.29e-11 | 62.8 |
| MS.gene89101.t1 | MTR_2g016690 | 24.576 | 236 | 163 | 7 | 16 | 240 | 92 | 323 | 4.78e-12 | 66.2 |
| MS.gene89101.t1 | MTR_1g097140 | 22.261 | 283 | 175 | 7 | 18 | 259 | 124 | 402 | 5.97e-12 | 66.2 |
| MS.gene89101.t1 | MTR_7g076230 | 38.679 | 106 | 62 | 2 | 159 | 264 | 342 | 444 | 6.91e-12 | 66.6 |
| MS.gene89101.t1 | MTR_3g107910 | 22.275 | 211 | 158 | 3 | 48 | 258 | 617 | 821 | 1.03e-11 | 66.2 |
| MS.gene89101.t1 | MTR_3g107910 | 22.275 | 211 | 158 | 3 | 48 | 258 | 610 | 814 | 1.08e-11 | 65.9 |
| MS.gene89101.t1 | MTR_7g104550 | 27.727 | 220 | 133 | 8 | 76 | 275 | 39 | 252 | 3.55e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89101.t1 | AT1G79990 | 66.443 | 298 | 100 | 0 | 5 | 302 | 3 | 300 | 2.40e-146 | 434 |
| MS.gene89101.t1 | AT1G79990 | 66.443 | 298 | 100 | 0 | 5 | 302 | 3 | 300 | 2.72e-146 | 434 |
| MS.gene89101.t1 | AT1G52360 | 64.765 | 298 | 105 | 0 | 5 | 302 | 3 | 300 | 3.31e-145 | 432 |
| MS.gene89101.t1 | AT3G15980 | 65.646 | 294 | 101 | 0 | 9 | 302 | 7 | 300 | 3.49e-145 | 431 |
| MS.gene89101.t1 | AT1G52360 | 64.765 | 298 | 105 | 0 | 5 | 302 | 3 | 300 | 4.16e-145 | 431 |
| MS.gene89101.t1 | AT1G52360 | 64.765 | 298 | 105 | 0 | 5 | 302 | 3 | 300 | 4.16e-145 | 431 |
| MS.gene89101.t1 | AT3G15980 | 65.646 | 294 | 101 | 0 | 9 | 302 | 7 | 300 | 7.94e-145 | 431 |
| MS.gene89101.t1 | AT3G15980 | 65.646 | 294 | 101 | 0 | 9 | 302 | 7 | 300 | 8.31e-145 | 431 |
| MS.gene89101.t1 | AT3G15980 | 65.646 | 294 | 101 | 0 | 9 | 302 | 7 | 300 | 8.31e-145 | 431 |
| MS.gene89101.t1 | AT3G15980 | 65.646 | 294 | 101 | 0 | 9 | 302 | 7 | 300 | 8.31e-145 | 431 |
| MS.gene89101.t1 | AT3G15980 | 65.646 | 294 | 101 | 0 | 9 | 302 | 7 | 300 | 8.31e-145 | 431 |
| MS.gene89101.t1 | AT1G52360 | 64.333 | 300 | 107 | 0 | 3 | 302 | 45 | 344 | 1.08e-144 | 432 |
| MS.gene89101.t1 | AT3G15980 | 65.870 | 293 | 100 | 0 | 9 | 301 | 7 | 299 | 1.09e-144 | 431 |
| MS.gene89101.t1 | AT2G21390 | 32.278 | 316 | 181 | 6 | 12 | 298 | 4 | 315 | 7.14e-49 | 175 |
| MS.gene89101.t1 | AT2G21390 | 29.518 | 166 | 113 | 3 | 94 | 259 | 2 | 163 | 7.14e-22 | 96.7 |
| MS.gene89101.t1 | AT1G62020 | 31.646 | 316 | 183 | 5 | 12 | 298 | 4 | 315 | 8.24e-49 | 175 |
| MS.gene89101.t1 | AT1G62020 | 29.240 | 171 | 117 | 3 | 94 | 264 | 2 | 168 | 2.04e-21 | 95.5 |
| MS.gene89101.t1 | AT3G49660 | 24.096 | 249 | 187 | 2 | 11 | 258 | 65 | 312 | 2.42e-21 | 92.8 |
| MS.gene89101.t1 | AT3G49660 | 28.829 | 222 | 148 | 5 | 53 | 268 | 18 | 235 | 5.59e-21 | 91.7 |
| MS.gene89101.t1 | AT3G49660 | 29.870 | 154 | 100 | 3 | 138 | 286 | 18 | 168 | 6.02e-15 | 74.7 |
| MS.gene89101.t1 | AT3G49660 | 31.061 | 132 | 88 | 2 | 138 | 269 | 65 | 193 | 7.51e-13 | 68.6 |
| MS.gene89101.t1 | AT5G25150 | 30.332 | 211 | 132 | 4 | 99 | 309 | 416 | 611 | 6.13e-21 | 93.6 |
| MS.gene89101.t1 | AT5G25150 | 25.248 | 202 | 147 | 3 | 61 | 262 | 420 | 617 | 7.24e-15 | 75.5 |
| MS.gene89101.t1 | AT5G25150 | 24.569 | 232 | 168 | 4 | 13 | 241 | 414 | 641 | 1.48e-14 | 74.7 |
| MS.gene89101.t1 | AT5G25150 | 30.332 | 211 | 132 | 4 | 99 | 309 | 416 | 611 | 6.32e-21 | 93.6 |
| MS.gene89101.t1 | AT5G25150 | 25.248 | 202 | 147 | 3 | 61 | 262 | 420 | 617 | 7.82e-15 | 75.5 |
| MS.gene89101.t1 | AT5G25150 | 24.569 | 232 | 168 | 4 | 13 | 241 | 414 | 641 | 1.53e-14 | 74.7 |
| MS.gene89101.t1 | AT1G11160 | 25.660 | 265 | 187 | 7 | 11 | 272 | 9 | 266 | 6.69e-20 | 90.9 |
| MS.gene89101.t1 | AT1G11160 | 24.664 | 223 | 164 | 3 | 74 | 296 | 31 | 249 | 4.06e-16 | 79.3 |
| MS.gene89101.t1 | AT1G11160 | 29.310 | 174 | 118 | 4 | 93 | 265 | 7 | 176 | 5.46e-16 | 79.0 |
| MS.gene89101.t1 | AT1G11160 | 25.660 | 265 | 187 | 7 | 11 | 272 | 9 | 266 | 8.03e-20 | 90.5 |
| MS.gene89101.t1 | AT1G11160 | 24.554 | 224 | 165 | 3 | 73 | 296 | 30 | 249 | 5.00e-16 | 79.3 |
| MS.gene89101.t1 | AT1G11160 | 29.310 | 174 | 118 | 4 | 93 | 265 | 7 | 176 | 5.05e-16 | 79.3 |
| MS.gene89101.t1 | AT1G11160 | 25.660 | 265 | 187 | 7 | 11 | 272 | 9 | 266 | 8.34e-20 | 90.5 |
| MS.gene89101.t1 | AT1G11160 | 24.554 | 224 | 165 | 3 | 73 | 296 | 30 | 249 | 4.56e-16 | 79.3 |
| MS.gene89101.t1 | AT1G11160 | 29.310 | 174 | 118 | 4 | 93 | 265 | 7 | 176 | 5.14e-16 | 79.3 |
| MS.gene89101.t1 | AT4G02730 | 26.230 | 244 | 172 | 5 | 38 | 279 | 24 | 261 | 6.50e-19 | 86.3 |
| MS.gene89101.t1 | AT5G08390 | 27.604 | 192 | 135 | 3 | 74 | 265 | 32 | 219 | 7.14e-19 | 87.8 |
| MS.gene89101.t1 | AT5G08390 | 27.624 | 181 | 126 | 4 | 86 | 265 | 1 | 177 | 6.75e-14 | 72.8 |
| MS.gene89101.t1 | AT5G08390 | 23.106 | 264 | 195 | 6 | 11 | 272 | 10 | 267 | 9.25e-13 | 69.3 |
| MS.gene89101.t1 | AT5G23430 | 27.604 | 192 | 135 | 3 | 74 | 265 | 32 | 219 | 3.13e-18 | 85.9 |
| MS.gene89101.t1 | AT5G23430 | 27.011 | 174 | 122 | 4 | 93 | 265 | 8 | 177 | 9.50e-13 | 69.3 |
| MS.gene89101.t1 | AT5G23430 | 22.887 | 284 | 208 | 7 | 11 | 292 | 10 | 284 | 1.36e-12 | 68.9 |
| MS.gene89101.t1 | AT5G23430 | 27.604 | 192 | 135 | 3 | 74 | 265 | 32 | 219 | 3.13e-18 | 85.9 |
| MS.gene89101.t1 | AT5G23430 | 27.011 | 174 | 122 | 4 | 93 | 265 | 8 | 177 | 9.50e-13 | 69.3 |
| MS.gene89101.t1 | AT5G23430 | 22.887 | 284 | 208 | 7 | 11 | 292 | 10 | 284 | 1.36e-12 | 68.9 |
| MS.gene89101.t1 | AT5G23430 | 27.604 | 192 | 135 | 3 | 74 | 265 | 32 | 219 | 3.28e-18 | 85.5 |
| MS.gene89101.t1 | AT5G23430 | 27.011 | 174 | 122 | 4 | 93 | 265 | 8 | 177 | 9.76e-13 | 69.3 |
| MS.gene89101.t1 | AT5G23430 | 22.887 | 284 | 208 | 7 | 11 | 292 | 10 | 284 | 1.45e-12 | 68.6 |
| MS.gene89101.t1 | AT1G11160 | 26.126 | 222 | 155 | 6 | 53 | 272 | 10 | 224 | 1.30e-17 | 84.0 |
| MS.gene89101.t1 | AT1G11160 | 26.263 | 198 | 142 | 3 | 99 | 296 | 14 | 207 | 4.40e-15 | 76.3 |
| MS.gene89101.t1 | AT1G11160 | 30.769 | 130 | 87 | 2 | 136 | 265 | 8 | 134 | 1.57e-13 | 71.6 |
| MS.gene89101.t1 | AT4G15900 | 29.480 | 173 | 118 | 3 | 97 | 269 | 172 | 340 | 1.75e-17 | 83.2 |
| MS.gene89101.t1 | AT4G15900 | 29.323 | 133 | 91 | 2 | 130 | 262 | 162 | 291 | 6.00e-16 | 78.6 |
| MS.gene89101.t1 | AT4G15900 | 24.167 | 240 | 177 | 4 | 20 | 259 | 179 | 413 | 2.26e-14 | 73.9 |
| MS.gene89101.t1 | AT4G29830 | 26.068 | 234 | 154 | 6 | 65 | 282 | 64 | 294 | 1.61e-16 | 79.0 |
| MS.gene89101.t1 | AT2G41500 | 29.381 | 194 | 132 | 4 | 97 | 289 | 335 | 524 | 2.89e-16 | 79.7 |
| MS.gene89101.t1 | AT2G41500 | 26.705 | 176 | 121 | 4 | 94 | 269 | 291 | 458 | 1.49e-11 | 65.5 |
| MS.gene89101.t1 | AT2G41500 | 29.381 | 194 | 132 | 4 | 97 | 289 | 335 | 524 | 2.89e-16 | 79.7 |
| MS.gene89101.t1 | AT2G41500 | 26.705 | 176 | 121 | 4 | 94 | 269 | 291 | 458 | 1.49e-11 | 65.5 |
| MS.gene89101.t1 | AT3G16650 | 29.323 | 133 | 91 | 2 | 130 | 262 | 156 | 285 | 3.23e-16 | 79.3 |
| MS.gene89101.t1 | AT3G16650 | 30.061 | 163 | 109 | 4 | 97 | 259 | 166 | 323 | 5.48e-15 | 75.5 |
| MS.gene89101.t1 | AT3G16650 | 23.629 | 237 | 134 | 3 | 20 | 256 | 173 | 362 | 1.44e-12 | 68.2 |
| MS.gene89101.t1 | AT1G61210 | 25.561 | 223 | 159 | 5 | 41 | 261 | 40 | 257 | 5.46e-16 | 79.0 |
| MS.gene89101.t1 | AT1G61210 | 27.778 | 180 | 125 | 4 | 93 | 271 | 7 | 182 | 2.90e-15 | 77.0 |
| MS.gene89101.t1 | AT1G61210 | 26.027 | 219 | 158 | 3 | 75 | 293 | 32 | 246 | 5.52e-15 | 76.3 |
| MS.gene89101.t1 | AT5G16750 | 27.119 | 177 | 123 | 3 | 97 | 269 | 56 | 230 | 5.65e-16 | 79.0 |
| MS.gene89101.t1 | AT5G16750 | 27.600 | 250 | 164 | 6 | 71 | 306 | 371 | 617 | 1.00e-15 | 78.2 |
| MS.gene89101.t1 | AT5G16750 | 21.849 | 238 | 171 | 6 | 32 | 258 | 419 | 652 | 3.74e-11 | 64.3 |
| MS.gene89101.t1 | AT1G61210 | 25.561 | 223 | 159 | 5 | 41 | 261 | 40 | 257 | 1.77e-15 | 77.8 |
| MS.gene89101.t1 | AT1G61210 | 27.778 | 180 | 125 | 4 | 93 | 271 | 7 | 182 | 6.59e-15 | 75.9 |
| MS.gene89101.t1 | AT1G61210 | 26.027 | 219 | 158 | 3 | 75 | 293 | 32 | 246 | 1.39e-14 | 75.1 |
| MS.gene89101.t1 | AT1G61210 | 25.561 | 223 | 159 | 5 | 41 | 261 | 40 | 257 | 1.99e-15 | 77.4 |
| MS.gene89101.t1 | AT1G61210 | 27.778 | 180 | 125 | 4 | 93 | 271 | 7 | 182 | 7.03e-15 | 75.9 |
| MS.gene89101.t1 | AT1G61210 | 26.027 | 219 | 158 | 3 | 75 | 293 | 32 | 246 | 1.54e-14 | 74.7 |
| MS.gene89101.t1 | AT1G48630 | 25.532 | 282 | 186 | 9 | 10 | 280 | 56 | 324 | 2.38e-15 | 75.9 |
| MS.gene89101.t1 | AT1G48630 | 25.728 | 206 | 144 | 4 | 74 | 272 | 31 | 234 | 4.49e-13 | 69.3 |
| MS.gene89101.t1 | AT3G21540 | 25.795 | 283 | 190 | 8 | 9 | 280 | 400 | 673 | 2.59e-15 | 77.0 |
| MS.gene89101.t1 | AT3G21540 | 26.351 | 148 | 105 | 3 | 122 | 269 | 85 | 228 | 2.14e-11 | 65.1 |
| MS.gene89101.t1 | AT3G18130 | 25.704 | 284 | 183 | 10 | 10 | 280 | 56 | 324 | 4.39e-15 | 75.1 |
| MS.gene89101.t1 | AT3G18130 | 25.243 | 206 | 145 | 4 | 74 | 272 | 31 | 234 | 1.93e-12 | 67.4 |
| MS.gene89101.t1 | AT1G73720 | 31.613 | 155 | 96 | 3 | 115 | 262 | 227 | 378 | 1.23e-14 | 74.7 |
| MS.gene89101.t1 | AT5G13480 | 25.641 | 234 | 167 | 5 | 27 | 258 | 133 | 361 | 1.40e-14 | 74.7 |
| MS.gene89101.t1 | AT5G13480 | 25.641 | 234 | 167 | 5 | 27 | 258 | 121 | 349 | 1.43e-14 | 74.7 |
| MS.gene89101.t1 | AT5G13480 | 25.641 | 234 | 167 | 5 | 27 | 258 | 144 | 372 | 1.44e-14 | 74.7 |
| MS.gene89101.t1 | AT1G18080 | 28.205 | 195 | 128 | 5 | 74 | 259 | 31 | 222 | 1.60e-14 | 73.6 |
| MS.gene89101.t1 | AT1G18080 | 25.000 | 284 | 186 | 9 | 10 | 280 | 56 | 325 | 1.85e-14 | 73.2 |
| MS.gene89101.t1 | AT1G18080 | 29.302 | 215 | 135 | 8 | 97 | 299 | 11 | 220 | 2.03e-14 | 73.2 |
| MS.gene89101.t1 | AT5G13480 | 25.641 | 234 | 167 | 5 | 27 | 258 | 121 | 349 | 1.88e-14 | 74.3 |
| MS.gene89101.t1 | AT2G43770 | 25.701 | 214 | 154 | 4 | 55 | 267 | 49 | 258 | 5.03e-14 | 72.0 |
| MS.gene89101.t1 | AT2G43770 | 25.112 | 223 | 157 | 6 | 40 | 255 | 119 | 338 | 3.35e-12 | 66.6 |
| MS.gene89101.t1 | AT5G52820 | 31.724 | 145 | 96 | 2 | 116 | 260 | 332 | 473 | 1.42e-13 | 71.2 |
| MS.gene89101.t1 | AT5G52820 | 22.460 | 187 | 137 | 3 | 74 | 256 | 124 | 306 | 5.62e-11 | 63.5 |
| MS.gene89101.t1 | AT5G67320 | 28.846 | 208 | 132 | 5 | 94 | 291 | 358 | 559 | 5.72e-13 | 69.7 |
| MS.gene89101.t1 | AT1G71840 | 23.361 | 244 | 178 | 5 | 26 | 264 | 164 | 403 | 1.32e-12 | 68.2 |
| MS.gene89101.t1 | AT2G26060 | 26.818 | 220 | 134 | 9 | 93 | 288 | 12 | 228 | 1.37e-12 | 67.8 |
| MS.gene89101.t1 | AT2G26060 | 27.397 | 219 | 133 | 8 | 74 | 272 | 42 | 254 | 1.25e-11 | 65.1 |
| MS.gene89101.t1 | AT2G26060 | 26.818 | 220 | 134 | 9 | 93 | 288 | 12 | 228 | 1.62e-12 | 67.8 |
| MS.gene89101.t1 | AT2G26060 | 27.397 | 219 | 133 | 8 | 74 | 272 | 42 | 254 | 1.41e-11 | 65.1 |
| MS.gene89101.t1 | AT1G29260 | 27.615 | 239 | 151 | 9 | 74 | 305 | 76 | 299 | 1.82e-12 | 67.4 |
| MS.gene89101.t1 | AT4G34460 | 21.667 | 300 | 207 | 10 | 16 | 291 | 64 | 359 | 3.67e-12 | 66.6 |
| MS.gene89101.t1 | AT4G34460 | 21.667 | 300 | 207 | 10 | 16 | 291 | 59 | 354 | 3.84e-12 | 66.6 |
| MS.gene89101.t1 | AT4G34460 | 21.886 | 297 | 204 | 10 | 19 | 291 | 5 | 297 | 5.64e-12 | 65.9 |
| MS.gene89101.t1 | AT2G32700 | 24.402 | 209 | 150 | 4 | 51 | 258 | 521 | 722 | 9.86e-12 | 66.2 |
| MS.gene89101.t1 | AT2G32700 | 24.402 | 209 | 150 | 4 | 51 | 258 | 502 | 703 | 1.04e-11 | 66.2 |
| MS.gene89101.t1 | AT2G32700 | 24.402 | 209 | 150 | 4 | 51 | 258 | 502 | 703 | 1.04e-11 | 66.2 |
| MS.gene89101.t1 | AT2G32700 | 24.402 | 209 | 150 | 4 | 51 | 258 | 502 | 703 | 1.04e-11 | 66.2 |
| MS.gene89101.t1 | AT2G32700 | 24.402 | 209 | 150 | 4 | 51 | 258 | 502 | 703 | 1.04e-11 | 66.2 |
| MS.gene89101.t1 | AT2G32700 | 24.402 | 209 | 150 | 4 | 51 | 258 | 502 | 703 | 1.04e-11 | 66.2 |
| MS.gene89101.t1 | AT2G32700 | 24.402 | 209 | 150 | 4 | 51 | 258 | 500 | 701 | 1.10e-11 | 65.9 |
| MS.gene89101.t1 | AT1G49040 | 24.194 | 186 | 134 | 4 | 74 | 259 | 912 | 1090 | 5.28e-11 | 63.9 |
| MS.gene89101.t1 | AT5G43920 | 30.263 | 152 | 99 | 4 | 74 | 222 | 372 | 519 | 7.05e-11 | 63.2 |
| MS.gene89101.t1 | AT1G80490 | 24.127 | 315 | 203 | 13 | 22 | 303 | 359 | 670 | 8.06e-11 | 63.5 |
| MS.gene89101.t1 | AT1G80490 | 24.127 | 315 | 203 | 13 | 22 | 303 | 360 | 671 | 8.82e-11 | 63.2 |
| MS.gene89101.t1 | AT1G80490 | 24.127 | 315 | 203 | 13 | 22 | 303 | 360 | 671 | 8.82e-11 | 63.2 |
| MS.gene89101.t1 | AT3G18140 | 24.569 | 232 | 161 | 7 | 16 | 239 | 77 | 302 | 9.57e-11 | 62.0 |
| MS.gene89101.t1 | AT4G32551 | 24.528 | 212 | 152 | 5 | 48 | 258 | 678 | 882 | 9.69e-11 | 63.2 |
Find 57 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGAAGCAGTTATTATTAT+AGG | 0.174991 | 2.4:+2712029 | None:intergenic |
| GTTCTATTGGGTTTGTATTC+AGG | 0.191057 | 2.4:-2713462 | MS.gene89101:CDS |
| AGTTTATTGTTCGGGAAAAT+TGG | 0.194585 | 2.4:-2712816 | MS.gene89101:CDS |
| TGTCCTTCAAAGGTAAAATT+TGG | 0.195188 | 2.4:+2712309 | None:intergenic |
| TTTCTCATGCAGGGTTCTAT+TGG | 0.234404 | 2.4:-2713475 | MS.gene89101:intron |
| AGGCACATAAAGATTATATT+AGG | 0.246639 | 2.4:-2712720 | MS.gene89101:CDS |
| CGTCTACAATTATGAGAAAA+TGG | 0.277651 | 2.4:-2712761 | MS.gene89101:CDS |
| AGGATTCGACTGTTAAGATT+TGG | 0.281018 | 2.4:-2712007 | MS.gene89101:CDS |
| TAAAGATTATATTAGGAGTT+TGG | 0.294897 | 2.4:-2712713 | MS.gene89101:CDS |
| ATCAGCAAAGTTTATTGTTC+GGG | 0.299909 | 2.4:-2712824 | MS.gene89101:CDS |
| TTCTCATGCAGGGTTCTATT+GGG | 0.303380 | 2.4:-2713474 | MS.gene89101:intron |
| ACTTTGGTCTTGAGAGAGTA+TGG | 0.306267 | 2.4:-2711778 | MS.gene89101:CDS |
| TTTGCTAGTGCATCCCTTGA+TGG | 0.322703 | 2.4:-2712535 | MS.gene89101:CDS |
| ATCCCTTGATGGCACATTAA+AGG | 0.331387 | 2.4:-2712524 | MS.gene89101:intron |
| CATAATTGTTTACCTTTGTC+TGG | 0.355929 | 2.4:+2713418 | None:intergenic |
| ACTTTGTGCAGACTTGCTTT+TGG | 0.356628 | 2.4:-2711640 | MS.gene89101:intron |
| GGATTCGACTGTTAAGATTT+GGG | 0.363840 | 2.4:-2712006 | MS.gene89101:CDS |
| AAGTCTTGAAGTTGTGGAAT+TGG | 0.371938 | 2.4:-2712645 | MS.gene89101:CDS |
| GATCAGCAAAGTTTATTGTT+CGG | 0.380535 | 2.4:-2712825 | MS.gene89101:CDS |
| CTTCAAAACACATTGGACTT+TGG | 0.391193 | 2.4:-2711794 | MS.gene89101:CDS |
| ATTCAGGAACTATTTCCATT+TGG | 0.407773 | 2.4:-2713446 | MS.gene89101:CDS |
| AACTGTGTACAAACACTTGA+AGG | 0.421132 | 2.4:-2712095 | MS.gene89101:CDS |
| GATTTGGTATATTGATTCCT+CGG | 0.430037 | 2.4:-2712334 | MS.gene89101:CDS |
| CTTTGTCTGGTAGTTCCAAA+TGG | 0.432157 | 2.4:+2713431 | None:intergenic |
| GTTATTATTATAGGTATCTC+AGG | 0.444378 | 2.4:+2712038 | None:intergenic |
| GATGCACTAGCAAAGGTAGA+TGG | 0.446199 | 2.4:+2712544 | None:intergenic |
| AGCAAAGGTAGATGGATCCT+TGG | 0.462340 | 2.4:+2712552 | None:intergenic |
| GATACCACATATGGTAGAAA+AGG | 0.471047 | 2.4:+2712682 | None:intergenic |
| CTTGAGAGAGTATGGAGTAT+TGG | 0.472251 | 2.4:-2711770 | MS.gene89101:CDS |
| TTTGGGATGCTGTCACCTAT+AGG | 0.482117 | 2.4:-2711989 | MS.gene89101:intron |
| ATGCATTACCATGGCTCAGT+TGG | 0.485808 | 2.4:+2713609 | None:intergenic |
| TCATTTAATCTTGTTTCACT+TGG | 0.487565 | 2.4:+2711572 | None:intergenic |
| GGACAAGATAATAGAATTTG+AGG | 0.488321 | 2.4:-2712740 | MS.gene89101:CDS |
| AACACTATCCCATGCAATTG+AGG | 0.493922 | 2.4:-2713783 | MS.gene89101:intron |
| TGTGGAATTGGAAGAAAGGT+TGG | 0.499980 | 2.4:-2712633 | MS.gene89101:CDS |
| TCAGAAGCTGATACCACATA+TGG | 0.500705 | 2.4:+2712673 | None:intergenic |
| TATAATAATAACTGCTTCAG+AGG | 0.502357 | 2.4:-2712027 | MS.gene89101:CDS |
| TTGTGACAAAGGATTTATCA+TGG | 0.502790 | 2.4:-2711617 | MS.gene89101:CDS |
| AGAGCAATACCTCAATTGCA+TGG | 0.521202 | 2.4:+2713774 | None:intergenic |
| GCAAAGGTAGATGGATCCTT+GGG | 0.525495 | 2.4:+2712553 | None:intergenic |
| ATACCTTTAATGTGCCATCA+AGG | 0.525764 | 2.4:+2712521 | None:intergenic |
| ACCTTTGAAGGACACTTGAA+AGG | 0.527737 | 2.4:-2712300 | MS.gene89101:CDS |
| TCCTTTCAAGTGTCCTTCAA+AGG | 0.537839 | 2.4:+2712299 | None:intergenic |
| AAGTTGTGGAATTGGAAGAA+AGG | 0.547862 | 2.4:-2712637 | MS.gene89101:CDS |
| TTCTGATGATTACACTGCCA+AGG | 0.549721 | 2.4:-2712223 | MS.gene89101:intron |
| AAAGGTAAAATTTGGAGCCG+AGG | 0.569489 | 2.4:+2712317 | None:intergenic |
| TACCTTTAATGTGCCATCAA+GGG | 0.574095 | 2.4:+2712522 | None:intergenic |
| ATGATCAAGTCTTGAAGTTG+TGG | 0.575659 | 2.4:-2712651 | MS.gene89101:CDS |
| CTCAAAGTTAGTGAATCTCC+AGG | 0.576399 | 2.4:-2712943 | MS.gene89101:intron |
| GAGCAATACCTCAATTGCAT+GGG | 0.577523 | 2.4:+2713775 | None:intergenic |
| ATCAAGGGATGCACTAGCAA+AGG | 0.583927 | 2.4:+2712537 | None:intergenic |
| ATCTGCATCCAACTGAGCCA+TGG | 0.593899 | 2.4:-2713617 | MS.gene89101:intron |
| TTGCAGGCTTCAAAACACAT+TGG | 0.596689 | 2.4:-2711801 | MS.gene89101:intron |
| GCAAGTGGCATTTAATCCCA+AGG | 0.613075 | 2.4:-2712569 | MS.gene89101:CDS |
| CATTTGGAACTACCAGACAA+AGG | 0.630891 | 2.4:-2713430 | MS.gene89101:intron |
| TCGGGAAAATTGGATTATCG+CGG | 0.677571 | 2.4:-2712806 | MS.gene89101:CDS |
| CTCACATTATGTGATGCAAG+TGG | 0.679660 | 2.4:-2712584 | MS.gene89101:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAGAAAAAAATAGATTT+TGG | + | chr2.4:2712938-2712957 | None:intergenic | 10.0% |
| !! | GATAGAATTATATATTTCAA+AGG | + | chr2.4:2714010-2714029 | None:intergenic | 15.0% |
| !!! | AAAACTTCACATAATTTTTT+AGG | - | chr2.4:2712102-2712121 | MS.gene89101:CDS | 15.0% |
| !!! | AAATGATTTTTTTAGCAAAA+TGG | + | chr2.4:2712878-2712897 | None:intergenic | 15.0% |
| !!! | ATCTTTTTTATTTATGTGAA+AGG | - | chr2.4:2711940-2711959 | MS.gene89101:intron | 15.0% |
| !!! | TTCTCATTTTTTTTTTTGTA+TGG | - | chr2.4:2713313-2713332 | MS.gene89101:intron | 15.0% |
| !!! | TTTATTTTTCAAAACAAAGA+GGG | + | chr2.4:2711599-2711618 | None:intergenic | 15.0% |
| !!! | TTTTATTTTTCAAAACAAAG+AGG | + | chr2.4:2711600-2711619 | None:intergenic | 15.0% |
| !! | AAAAAAAATCCAAAACAAAC+AGG | + | chr2.4:2712781-2712800 | None:intergenic | 20.0% |
| !! | AATCTACAAAAAGAGTAAAT+TGG | + | chr2.4:2713821-2713840 | None:intergenic | 20.0% |
| !! | ACGTATATAGTCTTTATTAT+AGG | - | chr2.4:2712243-2712262 | MS.gene89101:CDS | 20.0% |
| !! | ATTCATTAAATGATTGTATG+TGG | + | chr2.4:2712269-2712288 | None:intergenic | 20.0% |
| !! | GTATTTAATTAAATTTCTGC+TGG | - | chr2.4:2714317-2714336 | MS.gene89101:intron | 20.0% |
| !! | GTTCTTAATAATATTCATTG+TGG | + | chr2.4:2711710-2711729 | None:intergenic | 20.0% |
| !! | TAAAGATTATATTAGGAGTT+TGG | - | chr2.4:2713458-2713477 | MS.gene89101:CDS | 20.0% |
| !! | TATATATTTCAAAGGCTAAA+AGG | + | chr2.4:2714002-2714021 | None:intergenic | 20.0% |
| !! | TGAAAATATGAAATACCTAT+AGG | + | chr2.4:2714200-2714219 | None:intergenic | 20.0% |
| !! | TTGAAATGTGAATTTAGTAT+AGG | + | chr2.4:2714032-2714051 | None:intergenic | 20.0% |
| !!! | AGCATTTTCATTGTTAATTA+AGG | + | chr2.4:2712041-2712060 | None:intergenic | 20.0% |
| !!! | ATTTACTCTTTTTGTAGATT+TGG | - | chr2.4:2713821-2713840 | MS.gene89101:intron | 20.0% |
| !!! | TCTATTTTTTTCTTAATGCA+AGG | - | chr2.4:2712941-2712960 | MS.gene89101:intron | 20.0% |
| !!! | TGAAATAGATTTTCATTTTG+AGG | + | chr2.4:2712905-2712924 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATAATAATGAC+TGG | + | chr2.4:2712195-2712214 | None:intergenic | 20.0% |
| ! | AGACAAAGGTAAACAATTAT+GGG | - | chr2.4:2712755-2712774 | MS.gene89101:CDS | 25.0% |
| ! | AGGCACATAAAGATTATATT+AGG | - | chr2.4:2713451-2713470 | MS.gene89101:CDS | 25.0% |
| ! | CAACAAAAATAACTCGAATT+AGG | + | chr2.4:2713290-2713309 | None:intergenic | 25.0% |
| ! | CAATATGTTGTCAATTAATG+AGG | + | chr2.4:2714509-2714528 | None:intergenic | 25.0% |
| ! | GTTATTATTATAGGTATCTC+AGG | + | chr2.4:2714136-2714155 | None:intergenic | 25.0% |
| ! | TACTAAATTCACATTTCAAC+AGG | - | chr2.4:2714033-2714052 | MS.gene89101:intron | 25.0% |
| ! | TATAATAATAACTGCTTCAG+AGG | - | chr2.4:2714144-2714163 | MS.gene89101:intron | 25.0% |
| ! | TCTTATGTTGTTGAATTTGT+AGG | - | chr2.4:2712361-2712380 | MS.gene89101:intron | 25.0% |
| ! | TTACACTTAGAATTTGCAAA+AGG | + | chr2.4:2712634-2712653 | None:intergenic | 25.0% |
| ! | TTGATAAACTGAATTCATGT+AGG | + | chr2.4:2712607-2712626 | None:intergenic | 25.0% |
| ! | TTTAGCTAATGAAAGTTTCT+CGG | - | chr2.4:2714267-2714286 | MS.gene89101:intron | 25.0% |
| !! | ATATAATACTTTTCTCATGC+AGG | - | chr2.4:2712686-2712705 | MS.gene89101:CDS | 25.0% |
| !! | GATAAGCAATATCTTTTAAG+TGG | - | chr2.4:2713925-2713944 | MS.gene89101:intron | 25.0% |
| !! | TATAATACTTTTCTCATGCA+GGG | - | chr2.4:2712687-2712706 | MS.gene89101:CDS | 25.0% |
| !! | TCTGAAGCAGTTATTATTAT+AGG | + | chr2.4:2714145-2714164 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr2.4:2712305-2712324 | MS.gene89101:CDS | 25.0% |
| !!! | AATCATTATTTTTCAGCTGA+AGG | + | chr2.4:2713133-2713152 | None:intergenic | 25.0% |
| !!! | TTTGCTGCTATTTTTCTTTT+TGG | - | chr2.4:2712487-2712506 | MS.gene89101:intron | 25.0% |
| AATTCACATTTCAACAGGTA+TGG | - | chr2.4:2714038-2714057 | MS.gene89101:intron | 30.0% | |
| ACTCCACAATAATAATATCG+AGG | + | chr2.4:2713697-2713716 | None:intergenic | 30.0% | |
| ACTCCTCGATATTATTATTG+TGG | - | chr2.4:2713691-2713710 | MS.gene89101:intron | 30.0% | |
| ACTTAAAGCTGAATGATGAA+AGG | - | chr2.4:2712146-2712165 | MS.gene89101:intron | 30.0% | |
| AGTTTATTGTTCGGGAAAAT+TGG | - | chr2.4:2713355-2713374 | MS.gene89101:intron | 30.0% | |
| ATAATAATATCGAGGAGTTG+AGG | + | chr2.4:2713689-2713708 | None:intergenic | 30.0% | |
| ATCAGCAAAGTTTATTGTTC+GGG | - | chr2.4:2713347-2713366 | MS.gene89101:intron | 30.0% | |
| ATTCACATTTCAACAGGTAT+GGG | - | chr2.4:2714039-2714058 | MS.gene89101:intron | 30.0% | |
| ATTCAGGAACTATTTCCATT+TGG | - | chr2.4:2712725-2712744 | MS.gene89101:CDS | 30.0% | |
| CAGACAAAGGTAAACAATTA+TGG | - | chr2.4:2712754-2712773 | MS.gene89101:CDS | 30.0% | |
| CATAATTGTTTACCTTTGTC+TGG | + | chr2.4:2712756-2712775 | None:intergenic | 30.0% | |
| CGTCTACAATTATGAGAAAA+TGG | - | chr2.4:2713410-2713429 | MS.gene89101:intron | 30.0% | |
| GAAATATGTAGTAAGAAGCA+GGG | + | chr2.4:2713774-2713793 | None:intergenic | 30.0% | |
| GATCAGCAAAGTTTATTGTT+CGG | - | chr2.4:2713346-2713365 | MS.gene89101:intron | 30.0% | |
| GCATATTTCTTGCACAATAA+AGG | - | chr2.4:2712581-2712600 | MS.gene89101:CDS | 30.0% | |
| GGACAAGATAATAGAATTTG+AGG | - | chr2.4:2713431-2713450 | MS.gene89101:CDS | 30.0% | |
| TAATAAACATGTCTGACCAA+GGG | + | chr2.4:2711917-2711936 | None:intergenic | 30.0% | |
| TAGCATAGAAAGTGATATTG+TGG | + | chr2.4:2712004-2712023 | None:intergenic | 30.0% | |
| TATACAATGTGACATTTACC+TGG | + | chr2.4:2713249-2713268 | None:intergenic | 30.0% | |
| TGAAATATGTAGTAAGAAGC+AGG | + | chr2.4:2713775-2713794 | None:intergenic | 30.0% | |
| TGCTTATAATAATGACTGGA+GGG | + | chr2.4:2712191-2712210 | None:intergenic | 30.0% | |
| TGTCCTTCAAAGGTAAAATT+TGG | + | chr2.4:2713865-2713884 | None:intergenic | 30.0% | |
| TTAATAAACATGTCTGACCA+AGG | + | chr2.4:2711918-2711937 | None:intergenic | 30.0% | |
| TTGCTTATAATAATGACTGG+AGG | + | chr2.4:2712192-2712211 | None:intergenic | 30.0% | |
| TTGTGACAAAGGATTTATCA+TGG | - | chr2.4:2714554-2714573 | MS.gene89101:intron | 30.0% | |
| !! | GATTTGGTATATTGATTCCT+CGG | - | chr2.4:2713837-2713856 | MS.gene89101:intron | 30.0% |
| AACTGTGTACAAACACTTGA+AGG | - | chr2.4:2714076-2714095 | MS.gene89101:intron | 35.0% | |
| AAGTCTTGAAGTTGTGGAAT+TGG | - | chr2.4:2713526-2713545 | MS.gene89101:intron | 35.0% | |
| AAGTTGTGGAATTGGAAGAA+AGG | - | chr2.4:2713534-2713553 | MS.gene89101:intron | 35.0% | |
| AGGATTCGACTGTTAAGATT+TGG | - | chr2.4:2714164-2714183 | MS.gene89101:intron | 35.0% | |
| AGTAACTGATATGCAAACCT+TGG | + | chr2.4:2713968-2713987 | None:intergenic | 35.0% | |
| ATACCTTTAATGTGCCATCA+AGG | + | chr2.4:2713653-2713672 | None:intergenic | 35.0% | |
| ATGATCAAGTCTTGAAGTTG+TGG | - | chr2.4:2713520-2713539 | MS.gene89101:intron | 35.0% | |
| CAAATGCTACTAACTATTGC+AGG | - | chr2.4:2714354-2714373 | MS.gene89101:intron | 35.0% | |
| CTTCAAAACACATTGGACTT+TGG | - | chr2.4:2714377-2714396 | MS.gene89101:intron | 35.0% | |
| GATACCACATATGGTAGAAA+AGG | + | chr2.4:2713492-2713511 | None:intergenic | 35.0% | |
| GCAAGAAATATGCATTACCA+TGG | + | chr2.4:2712574-2712593 | None:intergenic | 35.0% | |
| GGATTCGACTGTTAAGATTT+GGG | - | chr2.4:2714165-2714184 | MS.gene89101:intron | 35.0% | |
| GTTCTATTGGGTTTGTATTC+AGG | - | chr2.4:2712709-2712728 | MS.gene89101:CDS | 35.0% | |
| TACCTTTAATGTGCCATCAA+GGG | + | chr2.4:2713652-2713671 | None:intergenic | 35.0% | |
| TAGTTAATTCATACACCCTC+CGG | + | chr2.4:2712327-2712346 | None:intergenic | 35.0% | |
| ! | AATTATGGGCCTGTTTGTTT+TGG | - | chr2.4:2712769-2712788 | MS.gene89101:CDS | 35.0% |
| ! | CTTGTGATGAGACTTTTGAA+GGG | - | chr2.4:2713562-2713581 | MS.gene89101:intron | 35.0% |
| ! | GCTCCAAATTTTACCTTTGA+AGG | - | chr2.4:2713859-2713878 | MS.gene89101:intron | 35.0% |
| ! | TCATCCTTTTCTACCATATG+TGG | - | chr2.4:2713485-2713504 | MS.gene89101:intron | 35.0% |
| ! | TCTTGTGATGAGACTTTTGA+AGG | - | chr2.4:2713561-2713580 | MS.gene89101:intron | 35.0% |
| !! | CATTCAGCTTTAAGTATGCA+TGG | + | chr2.4:2712141-2712160 | None:intergenic | 35.0% |
| !! | TGGAGTATTGGCTACAAAAA+AGG | - | chr2.4:2714413-2714432 | MS.gene89101:intron | 35.0% |
| !! | TGTTTTGAACAAATTCGTGC+TGG | + | chr2.4:2712513-2712532 | None:intergenic | 35.0% |
| AACACTATCCCATGCAATTG+AGG | - | chr2.4:2712388-2712407 | MS.gene89101:intron | 40.0% | |
| AGAGCAATACCTCAATTGCA+TGG | + | chr2.4:2712400-2712419 | None:intergenic | 40.0% | |
| CCATAAGTCTTGAGTAGTGA+GGG | + | chr2.4:2711888-2711907 | None:intergenic | 40.0% | |
| CCTCACTACTCAAGACTTAT+GGG | - | chr2.4:2711886-2711905 | MS.gene89101:intron | 40.0% | |
| CTCAAAGTTAGTGAATCTCC+AGG | - | chr2.4:2713228-2713247 | MS.gene89101:intron | 40.0% | |
| CTCACATTATGTGATGCAAG+TGG | - | chr2.4:2713587-2713606 | MS.gene89101:intron | 40.0% | |
| CTTTGTCTGGTAGTTCCAAA+TGG | + | chr2.4:2712743-2712762 | None:intergenic | 40.0% | |
| GAGCAATACCTCAATTGCAT+GGG | + | chr2.4:2712399-2712418 | None:intergenic | 40.0% | |
| GCTAATGAAAGTTTCTCGGT+AGG | - | chr2.4:2714271-2714290 | MS.gene89101:intron | 40.0% | |
| TCAGAAGCTGATACCACATA+TGG | + | chr2.4:2713501-2713520 | None:intergenic | 40.0% | |
| TCAGCTGAAGGTTCAGATAT+GGG | + | chr2.4:2713121-2713140 | None:intergenic | 40.0% | |
| TCGGGAAAATTGGATTATCG+CGG | - | chr2.4:2713365-2713384 | MS.gene89101:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr2.4:2712309-2712328 | MS.gene89101:CDS | 40.0% | |
| TGTGGAATTGGAAGAAAGGT+TGG | - | chr2.4:2713538-2713557 | MS.gene89101:intron | 40.0% | |
| TTCAGCTGAAGGTTCAGATA+TGG | + | chr2.4:2713122-2713141 | None:intergenic | 40.0% | |
| TTCTCATGCAGGGTTCTATT+GGG | - | chr2.4:2712697-2712716 | MS.gene89101:CDS | 40.0% | |
| TTCTCTTGTGATTTCGCGTT+CGG | + | chr2.4:2711732-2711751 | None:intergenic | 40.0% | |
| TTCTGATGATTACACTGCCA+AGG | - | chr2.4:2713948-2713967 | MS.gene89101:intron | 40.0% | |
| TTGCAGGCTTCAAAACACAT+TGG | - | chr2.4:2714370-2714389 | MS.gene89101:intron | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr2.4:2712308-2712327 | MS.gene89101:CDS | 40.0% | |
| TTTCTCATGCAGGGTTCTAT+TGG | - | chr2.4:2712696-2712715 | MS.gene89101:CDS | 40.0% | |
| ! | AAAGGTAAAATTTGGAGCCG+AGG | + | chr2.4:2713857-2713876 | None:intergenic | 40.0% |
| ! | ACCTTTGAAGGACACTTGAA+AGG | - | chr2.4:2713871-2713890 | MS.gene89101:intron | 40.0% |
| ! | ATCCCTTGATGGCACATTAA+AGG | - | chr2.4:2713647-2713666 | MS.gene89101:CDS | 40.0% |
| ! | ATCGAGGAGTTGAGGATTTT+CGG | + | chr2.4:2713681-2713700 | None:intergenic | 40.0% |
| ! | CATTTGGAACTACCAGACAA+AGG | - | chr2.4:2712741-2712760 | MS.gene89101:CDS | 40.0% |
| ! | CTTGAGAGAGTATGGAGTAT+TGG | - | chr2.4:2714401-2714420 | MS.gene89101:intron | 40.0% |
| ! | TCCTTTCAAGTGTCCTTCAA+AGG | + | chr2.4:2713875-2713894 | None:intergenic | 40.0% |
| !! | ACTTTGGTCTTGAGAGAGTA+TGG | - | chr2.4:2714393-2714412 | MS.gene89101:intron | 40.0% |
| !! | ACTTTGTGCAGACTTGCTTT+TGG | - | chr2.4:2714531-2714550 | MS.gene89101:intron | 40.0% |
| !! | CTTGCTTTTGGTTGTGACAA+AGG | - | chr2.4:2714543-2714562 | MS.gene89101:intron | 40.0% |
| AAACATGTCTGACCAAGGGA+TGG | + | chr2.4:2711913-2711932 | None:intergenic | 45.0% | |
| AGCAAAGGTAGATGGATCCT+TGG | + | chr2.4:2713622-2713641 | None:intergenic | 45.0% | |
| ATCAAGGGATGCACTAGCAA+AGG | + | chr2.4:2713637-2713656 | None:intergenic | 45.0% | |
| ATGCATTACCATGGCTCAGT+TGG | + | chr2.4:2712565-2712584 | None:intergenic | 45.0% | |
| CCCATAAGTCTTGAGTAGTG+AGG | + | chr2.4:2711889-2711908 | None:intergenic | 45.0% | |
| CCCTCACTACTCAAGACTTA+TGG | - | chr2.4:2711885-2711904 | MS.gene89101:intron | 45.0% | |
| GATGCACTAGCAAAGGTAGA+TGG | + | chr2.4:2713630-2713649 | None:intergenic | 45.0% | |
| GCAAAGGTAGATGGATCCTT+GGG | + | chr2.4:2713621-2713640 | None:intergenic | 45.0% | |
| GCAAGTGGCATTTAATCCCA+AGG | - | chr2.4:2713602-2713621 | MS.gene89101:intron | 45.0% | |
| TTTGCTAGTGCATCCCTTGA+TGG | - | chr2.4:2713636-2713655 | MS.gene89101:CDS | 45.0% | |
| ! | TTTGGGATGCTGTCACCTAT+AGG | - | chr2.4:2714182-2714201 | MS.gene89101:intron | 45.0% |
| AGACTTATGGGTCCATCCCT+TGG | - | chr2.4:2711898-2711917 | MS.gene89101:intron | 50.0% | |
| ATCTGCATCCAACTGAGCCA+TGG | - | chr2.4:2712554-2712573 | MS.gene89101:CDS | 50.0% | |
| CATGCGTGCCTGTGTTTGTG+TGG | - | chr2.4:2711831-2711850 | MS.gene89101:intron | 55.0% | |
| CGTGCCTGTGTTTGTGTGGT+GGG | - | chr2.4:2711835-2711854 | MS.gene89101:intron | 55.0% | |
| CGCACCCACCACACAAACAC+AGG | + | chr2.4:2711842-2711861 | None:intergenic | 60.0% | |
| GCGTGCCTGTGTTTGTGTGG+TGG | - | chr2.4:2711834-2711853 | MS.gene89101:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 2711576 | 2714617 | 2711576 | ID=MS.gene89101 |
| chr2.4 | mRNA | 2711576 | 2714617 | 2711576 | ID=MS.gene89101.t1;Parent=MS.gene89101 |
| chr2.4 | exon | 2714615 | 2714617 | 2714615 | ID=MS.gene89101.t1.exon1;Parent=MS.gene89101.t1 |
| chr2.4 | CDS | 2714615 | 2714617 | 2714615 | ID=cds.MS.gene89101.t1;Parent=MS.gene89101.t1 |
| chr2.4 | exon | 2713784 | 2713810 | 2713784 | ID=MS.gene89101.t1.exon2;Parent=MS.gene89101.t1 |
| chr2.4 | CDS | 2713784 | 2713810 | 2713784 | ID=cds.MS.gene89101.t1;Parent=MS.gene89101.t1 |
| chr2.4 | exon | 2713618 | 2713679 | 2713618 | ID=MS.gene89101.t1.exon3;Parent=MS.gene89101.t1 |
| chr2.4 | CDS | 2713618 | 2713679 | 2713618 | ID=cds.MS.gene89101.t1;Parent=MS.gene89101.t1 |
| chr2.4 | exon | 2713431 | 2713485 | 2713431 | ID=MS.gene89101.t1.exon4;Parent=MS.gene89101.t1 |
| chr2.4 | CDS | 2713431 | 2713485 | 2713431 | ID=cds.MS.gene89101.t1;Parent=MS.gene89101.t1 |
| chr2.4 | exon | 2712944 | 2712980 | 2712944 | ID=MS.gene89101.t1.exon5;Parent=MS.gene89101.t1 |
| chr2.4 | CDS | 2712944 | 2712980 | 2712944 | ID=cds.MS.gene89101.t1;Parent=MS.gene89101.t1 |
| chr2.4 | exon | 2712525 | 2712850 | 2712525 | ID=MS.gene89101.t1.exon6;Parent=MS.gene89101.t1 |
| chr2.4 | CDS | 2712525 | 2712850 | 2712525 | ID=cds.MS.gene89101.t1;Parent=MS.gene89101.t1 |
| chr2.4 | exon | 2712224 | 2712355 | 2712224 | ID=MS.gene89101.t1.exon7;Parent=MS.gene89101.t1 |
| chr2.4 | CDS | 2712224 | 2712355 | 2712224 | ID=cds.MS.gene89101.t1;Parent=MS.gene89101.t1 |
| chr2.4 | exon | 2711990 | 2712138 | 2711990 | ID=MS.gene89101.t1.exon8;Parent=MS.gene89101.t1 |
| chr2.4 | CDS | 2711990 | 2712138 | 2711990 | ID=cds.MS.gene89101.t1;Parent=MS.gene89101.t1 |
| chr2.4 | exon | 2711749 | 2711817 | 2711749 | ID=MS.gene89101.t1.exon9;Parent=MS.gene89101.t1 |
| chr2.4 | CDS | 2711749 | 2711817 | 2711749 | ID=cds.MS.gene89101.t1;Parent=MS.gene89101.t1 |
| chr2.4 | exon | 2711576 | 2711651 | 2711576 | ID=MS.gene89101.t1.exon10;Parent=MS.gene89101.t1 |
| chr2.4 | CDS | 2711576 | 2711651 | 2711576 | ID=cds.MS.gene89101.t1;Parent=MS.gene89101.t1 |
| Gene Sequence |
| Protein sequence |
